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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058782 ID=TCONS_00058782|Name=TCONS_00058782|organism=Clytia hemisphaerica|type=transcript|length=1015bp
GGGCTGATGCTCGCTGTAGAGATTTAGCCggttattgattgattgagaaG
GTAAGTTTTTGGTGGAACCAATTGTTGAAATAAACATGGACGAGGAATCC
TCATGACCAATCGTATTTGTTTTCCTCCCAAAGAGTGTTTTCAAAACTCG
CCAAGATTTTGCGTTGAaatagaaataaatcaaaacatcccatataccgt
tggaaaaacCAATCAAAGTTGCAGCCATGATGTAATAGATATTCAGTCCT
ATCATAACATTGATGATAGCAAAGGCTACCAGTGGACACCAGGTTAAAAG
ATAGGTTATTGTGATGTAAATACACATTTTCAATGAACGTAACTTTCGTT
TTTTCATGACTTTTCTTcgatctttttgtttttcctcAGATCTGTCAATA
ATGGTTTTCGTAATTTCCCGACACTGTTTCTTAACTGACCGGTATAAGAA
AATGTTGGTGGCAGATATGAAAATACCGCCTAAGATGGTAACTAAGCAAC
CAAAAAACAAAGTAGCTGCTGTATAAATTCGTCCAACACAAAAGGCGAGC
GGGAAAACACTTGTTGCGCTAAGAAACAAAACAGCATGCAATTTTCCAAG
CCGTGCATAGAAAAACGGTTTCCGGATGGCGACGTATCGCTCAATACTCT
GAATAATGGTGAAATAAATCTCAAAACCAGCCACACTGTCACGTGTTATG
AGGACGTAATTGGTTATGGACCATGGGTATCCAGCCCAATACATACACAC
AGTCACAACGTTCAATGCACCAACCAAAGCATGCGTTATGAAGAGGGATA
ACAGTATATAATCATTCAAAAAACGACGCAGAGTTTTGGATTTAAAAATT
GTCGAAGATGCCATTATGTTTAGAATGGTCACAATAGAACATTCGACAAA
CTGAAGAGCCATGACTAATTCCCATTCAAAAGCCATTGTTCCGTTTTTTT
ATGTGAACCATAAAGTAAATTTCAATATCTAAGCTGAAGATACATCgtct
aaaaaattcaaattc Run BLAST on NCBI protein sequence of TCONS_00058782-protein >TCONS_00058782-protein ID=TCONS_00058782-protein|Name=TCONS_00058782-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MAFEWELVMALQFVECSIVTILNIMASSTIFKSKTLRRFLNDYILLSLFI
THALVGALNVVTVCMYWAGYPWSITNYVLITRDSVAGFEIYFTIIQSIER
YVAIRKPFFYARLGKLHAVLFLSATSVFPLAFCVGRIYTAATLFFGCLVT
ILGGIFISATNIFLYRSVKKQCREITKTIIDRSEEKQKDRRKVMKKRKLR
SLKMCIYITITYLLTWCPLVAFAIINVMIGLNIYYIMAATLIGFSNGIWD
VLIYFYFNAKSWRVLKTLFGRKTNTIGHEDSSSMFISTIGSTKNLPSQSI
NNRLNLYSEHQP Run BLAST on NCBI transcript from alignment at scaffold_313:71697..72711 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058782 ID=TCONS_00058782|Name=TCONS_00058782|organism=Clytia hemisphaerica|type=transcript|length=1015bp|location=Sequence derived from alignment at scaffold_313:71697..72711 (Clytia hemisphaerica)
gaatttgaattttttagacGATGTATCTTCAGCTTAGATATTGAAATTTA
CTTTATGGTTCACATAAAAAAACGGAACAATGGCTTTTGAATGGGAATTA
GTCATGGCTCTTCAGTTTGTCGAATGTTCTATTGTGACCATTCTAAACAT
AATGGCATCTTCGACAATTTTTAAATCCAAAACTCTGCGTCGTTTTTTGA
ATGATTATATACTGTTATCCCTCTTCATAACGCATGCTTTGGTTGGTGCA
TTGAACGTTGTGACTGTGTGTATGTATTGGGCTGGATACCCATGGTCCAT
AACCAATTACGTCCTCATAACACGTGACAGTGTGGCTGGTTTTGAGATTT
ATTTCACCATTATTCAGAGTATTGAGCGATACGTCGCCATCCGGAAACCG
TTTTTCTATGCACGGCTTGGAAAATTGCATGCTGTTTTGTTTCTTAGCGC
AACAAGTGTTTTCCCGCTCGCCTTTTGTGTTGGACGAATTTATACAGCAG
CTACTTTGTTTTTTGGTTGCTTAGTTACCATCTTAGGCGGTATTTTCATA
TCTGCCACCAACATTTTCTTATACCGGTCAGTTAAGAAACAGTGTCGGGA
AATTACGAAAACCATTATTGACAGATCTgaggaaaaacaaaaagatcgAA
GAAAAGTCATGAAAAAACGAAAGTTACGTTCATTGAAAATGTGTATTTAC
ATCACAATAACCTATCTTTTAACCTGGTGTCCACTGGTAGCCTTTGCTAT
CATCAATGTTATGATAGGACTGAATATCTATTACATCATGGCTGCAACTT
TGATTGgtttttccaacggtatatgggatgttttgatttatttctattTC
AACGCAAAATCTTGGCGAGTTTTGAAAACACTCTTTGGGAGGAAAACAAA
TACGATTGGTCATGAGGATTCCTCGTCCATGTTTATTTCAACAATTGGTT
CCACCAAAAACTTACCttctcaatcaatcaataaccGGCTAAATCTCTAC
AGCGAGCATCAGCCC Coding sequence (CDS) from alignment at scaffold_313:71697..72711 >TCONS_00058782 ID=TCONS_00058782|Name=TCONS_00058782|organism=Clytia hemisphaerica|type=CDS|length=936bp|location=Sequence derived from alignment at scaffold_313:71697..72711 (Clytia hemisphaerica)
ATGGCTTTTGAATGGGAATTAGTCATGGCTCTTCAGTTTGTCGAATGTTC
TATTGTGACCATTCTAAACATAATGGCATCTTCGACAATTTTTAAATCCA
AAACTCTGCGTCGTTTTTTGAATGATTATATACTGTTATCCCTCTTCATA
ACGCATGCTTTGGTTGGTGCATTGAACGTTGTGACTGTGTGTATGTATTG
GGCTGGATACCCATGGTCCATAACCAATTACGTCCTCATAACACGTGACA
GTGTGGCTGGTTTTGAGATTTATTTCACCATTATTCAGAGTATTGAGCGA
TACGTCGCCATCCGGAAACCGTTTTTCTATGCACGGCTTGGAAAATTGCA
TGCTGTTTTGTTTCTTAGCGCAACAAGTGTTTTCCCGCTCGCCTTTTGTG
TTGGACGAATTTATACAGCAGCTACTTTGTTTTTTGGTTGCTTAGTTACC
ATCTTAGGCGGTATTTTCATATCTGCCACCAACATTTTCTTATACCGGTC
AGTTAAGAAACAGTGTCGGGAAATTACGAAAACCATTATTGACAGATCTg
aggaaaaacaaaaagatcgAAGAAAAGTCATGAAAAAACGAAAGTTACGT
TCATTGAAAATGTGTATTTACATCACAATAACCTATCTTTTAACCTGGTG
TCCACTGGTAGCCTTTGCTATCATCAATGTTATGATAGGACTGAATATCT
ATTACATCATGGCTGCAACTTTGATTGgtttttccaacggtatatgggat
gttttgatttatttctattTCAACGCAAAATCTTGGCGAGTTTTGAAAAC
ACTCTTTGGGAGGAAAACAAATACGATTGGTCATGAGGATTCCTCGTCCA
TGTTTATTTCAACAATTGGTTCCACCAAAAACTTACCttctcaatcaatc
aataaccGGCTAAATCTCTACAGCGAGCATCAGCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058782-exon-scaffold_313-1491911889:71697..72711 | TCONS_00058782-exon-scaffold_313-1491911889:71697..72711 | Clytia hemisphaerica | exon |
| TCONS_00058782-exon-scaffold_313-1510915933:71697..72711 | TCONS_00058782-exon-scaffold_313-1510915933:71697..72711 | Clytia hemisphaerica | exon |
| TCONS_00058782-exon-scaffold_313-1575043694:71697..72711 | TCONS_00058782-exon-scaffold_313-1575043694:71697..72711 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_313 | supercontig | scaffold_313:71697..72711 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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