TCONS_00058852 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058852
Unique NameTCONS_00058852
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1651

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058852 ID=TCONS_00058852|Name=TCONS_00058852|organism=Clytia hemisphaerica|type=transcript|length=1651bp
GTGATTTCATTCATTGTTATTGAATCCATACGTCAATGAGGTTTGAAACG
ACGCTACAAGTATCACTTATCTTAAGGcaaaaaagatatttattgaatca
aaaaagagaaaagaaaagatgtCATCAGCGGCACCTTTGAACTTCATTCC
CGGTGCAACGAAACCCATCATCCATTCACCTGAAAGAACGCCCGAACGCC
CACGTAAACTTGAGCGGAACGCCCGTTACAAAAGTATCCCATTACGTTAT
TCGTCGCGTTCTACGGAGAACGAAAAAGCCGTCGTTTCGGTTGGATTAGC
GGCACTTGCGTTGTTGGCTCNACGAAAAAGCCGTCGTTTCAGTTGGATTA
GCGGCGCTTGCGTTGTTGGCTCCGCCACGAAGTGAAAATTCGAGTGATGA
AGAAAATGTTATAGATATTGCGCAATCGATGAGATCTCGTTCTATGACAC
ATATTGAGAATTACCATAGATTAAAGAAATCAGACGTTAATGAAAATTAT
ACACAGGACTCTGCAAGCCATTCTAAAAAAGAACATAAAAAGATTTTACC
TTCTAAATTGGCGAGGAAAGCTAAAAAGGACATGGGCTCCAAACGATGGC
GTAGTCTTGAAAAGTTGCACAATTACACGCTAGGTTAGACTGTGTTTTGA
GGAGGAGATTTGTGAGTCATGGATCCAACCTGAAAGAATTCATGAGGTGG
AATTTGGATGTACTTGGTAATGTAAATCAATCATTGGACATTTGGAATCT
TAGGTTTTGTTAGGCATGATGTCACATGCTAACGTATTCCTTActtattt
attgttctaatgacaATTACCTTCAGGGATAAAGCCAATATGGGAAATAG
ATGGGTCTTTAAAAATCCCAACCCATAAAGAGGATTTTGTCTGACGTCTA
TGACATGCAAACAACGCCACAAAGCTTTTAGCTCAATGAGAAATATTGAA
GTTCCTTTATTTTTTAGAGGGATTCACTTATTTAAACACAGTGTGTCTGA
TAAAAAGCGGAACAAATTTTAGAACCACGAAAACCATCAAGGTAATAAAT
CTTTATTTTACCATTTATAGCCTAATCACggttttttaatataaaaaact
aTAGTGTTCAGTGGTGAGGAGGATTTATATAAATTCTGTACCAATATTTT
TCTGAGCACACTGTattactacaatcatggtcaaaactGGTGTCCGATGA
CCCTTTTCCATTAGCAAGTCCCCCTCTTCCCCAAAatcaatgttggagtt
gaaGTTCACCTTCAGAAGACACCACCATCAACATTGATATTGGGCGGGGG
GCGGGGGTAGACAAACAGTTATATCAAGGATCGTACATCACTCAGCAATA
TATTTTATACTAACAATATTTTATaccatatttaattttttttgtacatt
ttttgacGAAAACTCataaaattatttattattgtGTACAGtattagaaa
aatttaactacCATGAAGAGTAATAATGATCTTATTTggaaacaaagata
tttttctcgtGAAAGTCTTCATCCTTTATTTACTCATGGAATTCACACTG
CATTTACACAAACCGCTGGGGCCCCTACAATGGTTTCATAATGTGCAAAG
AAATTAAAATCTGTTCTAAAAATTGGCAGTCCATACTCTTTCAAACATTC
C
Run BLAST on NCBI

transcript from alignment at scaffold_314:552981..566220+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058852 ID=TCONS_00058852|Name=TCONS_00058852|organism=Clytia hemisphaerica|type=transcript|length=13240bp|location=Sequence derived from alignment at scaffold_314:552981..566220+ (Clytia hemisphaerica)
GTGATTTCATTCATTGTTATTGAATCCATACGTCAATGAGGTTTGAAACG
ACGCTACAAGTATCACTTATCTTAAGGGTATGTTTTATTCAGCCAAAATT
ACATAAGTGAGTTCATTGCAGAAATGTCGATTGAATAACAAACTTGGTAg
actacaatcagtgacaaaatatgtggcaatttcttgaaaaatccaTTCCC
CCTCCTAATATCAGTGTTGATGCGAGCTTTTTCTGAGCATGGTGACAGCC
TTTCTACCCATCAACATTGATACTAGGGGGGGGGGAATTCTTGCCACAAT
ATTTAGTCACAGATTGTAGTTTTTTATTTCgtggtttattttttttcgcc
CATTGTATTTGATAACAAGATCGAAATGTGTGCCAGAGAGTGGTCGATAA
AATTAGGGGGTCGTTCCAGTATAAGGACAAAGTGACGTCACCCAGCTAAA
CGACTTTAGATTGCCCATAATAttgatcacatgatcaaaataaGATGAAA
TTCAACCTTGAGTGCATCATAGCAGTGACGGAATTCGTCCGTTCTTTCCA
GTTCTTTCAACGAAAAGTTCAAGTTTCACTATTTTTGTCGATTGCACTTC
AAATTTTTTCGTTCTtcataactttttataagaatcgcTGTTATCTACAT
TTCTAAGAAACATGATTCAATTTGTCTTTCTCTTGTGACTTGGTATCGTT
ACCCAATAGCTATGAGCAGCCTATACTAAGGTTCGAGATTAGCATTTCTT
TGATTCCTTCTCTATACAAGAGTTAGCTTAGAAATGGGATTGGGTCAAAA
ATTCTTTTCGTTCGACCCAATTGTCCGTTAGATTTCTTACACCATTACTA
TAACAAACTTTAAAAgtaaactgagcaaaaaaaacgtCACTCCATGAGAT
CTATTTTCGCGTCAGTGATGAAGAAATTTAAAAGGCgtcaaagcaaaaaa
attctgaaaataaatctcaatgtttttaaaataaacaaaattgttGTTGG
TCTTACTAatggaatgaaaaatcaaaactgttttCAAACGGTGTCATATC
CTAAGTCTTACTTTGATGGGATGATCTAATGGGTGATTTCTATAATTTTC
TGAGACTCCTTTCTAAGGCTAGCAATAATTTATTTTGGTTGTTCGGCTTG
GTAAAGAATGAGTTGCTTATTTGATTGACGCCTTAGAAGGATTATGATTC
TAATTCGTTTTTCACTTCATGTattcaatttgaattttgatttttaacga
ttttaaagaaattttttttttaaacctacGAATATTACTTTCGTTCGTGT
TAGGAGTTACGTGATGACGTGATTAGAATTTTCTTAATGAGCTTGATGAT
GTGATGAATTTGAATAGTTTATGGTTTGGATTAGTTTTGTGATAGAAAGT
GCTGACATGGTGAAggatcatttttcaaattctacTGTTTGAAAAGAAAC
TGACTTTTTGGTTTGCTAACACNTTCATTTTGCAAATTCTACTGTTTGAA
AAGAAACTGACTTTTTGGTTTGCTAACACCGATATTCTTTTACTTTGCCG
tgataaattaaatttcagtgATGAATTTAAGCTACAACTCTCAACTTTTC
ATCTCATGCTAAATCCATTTTCGATTGATGTTCTATCAGTAAGATTGATC
TAGATTGATTGtttgatgacatttttaatGCAAGTCTGTCTATGTTTGAA
TGTATGCATAGATTCTTTGAATTTTAGAAATAAGGAATTGTGAGCTGATA
CGCTTATTGTTCTCTGAAGTAGATAGATGATAGATGGAGTATGTTACTTC
TAGATACCTCAGTTGTTCGACATTGGTACGAAGTTTTTGATCGATTgacg
agtggttaaggcgtcgTCGCCTCAAACCAGGGATTCAGCTCTTATCTTAG
CGAGCTCCAAGGTTCCTATATTTGAGGTAGTTTGGTCAGCGGTATAGGAA
AGAACTATTTCcatttcaattttcttcttttactgTATGTTGAGTTAGGT
CAATGATTATAGTAAGTTCACGAGGGTCACATTTCCGATATTCGTGTTAT
TACATCTCATTCATCTGATGGCTATATACACGGGTATATGAATACTTGTC
ACTTGTTGGAATAAGTTTTGGACTCCATCAGCGATTTTACTTGCAAGTTT
TCTGGAGGGGAAAGACATTATGAGCGCATGATATGGATAGTTTCAAAAGT
TTGACTTGAGATTCTTTCCACTGCCCTAAACAGAACTCCCAACtacgttt
ttttcaaaagtcgagGTAAAATTCAAGTCAcaggttttttatttttgtgt
gaaggaatactttttttcaaaagtcgagGTAAAATTCAAGTCAcaggttt
tttatttttgtgtgaaggaatactttttcaaaaattcaaacttttatgAC
TATATTTATGTTTACGCTTATAAATGAAAACAGTTATGCTTCTTTGGAAA
ATTCCGTCTAAAAACATCCTATCTCTCTTAACGTAACGGAAAGATGAACT
CTAAGTGACCACTTCATGTATACTGTAGATTCGTGTAATGtcgacatacc
ttgtctaattccgtcATAGCAgctatctggtctgtaaaatgtttataaat
aaaacctTCTGAATAAGCTGTTTAAAAATATCACTCTAACTACTTGTAAa
gactttacagaccagatagttgctattatggcggaattagacaaggtatg
tcggCATTACACGAAGCTACGGTACCAGTCTTCCGGTCCTTCGAAAAATA
ACTGATCTTCTGTGGGATGGTCTCTATGACAACTTCAATGCTATGGTAAC
CAATATACCTTTTAATACTTCCCTAGAAGCGTGTGATCTGAACTCAAATA
TGTGCAATGTGTAATGCCTTTTAGGTAGGCATAGGAAAGCCTTTGTAATG
TTTATTATTGAGTGTGGTTTGTTGTAATCTTTTAAGGCTGGTTGGTACCA
TTATTTGAACACCTTTTCTTCATTATTAGCTTAATTGTAAAGGGAATCAG
ACGTTTTGATTAATTGCGTCATAGTCAATTTATAGGGTATGGTTGCTGAA
GAAAAGTAATTCTACAATCTCGGAATTATGGATGAGTTATATTCCCATCA
GACTTGCTTACTTCCGATTCTTCTAACCATCCATCTTAAAAATGAATGGT
AGAGTTGTTTGCAGAGAACCGCAACCCTTTCGTTTGTTTGTTTGATAAGA
ATTTGAACGAGCCTTCGGAATttagacacccccttctcacagacccactt
ggaccccttcccactggagaaattggccaaaatatcgtccccagtgaaaa
attatactccaatttttgtccccgtagaaaataatcagataagcaaatcc
tggCTGCAAAGTATCGTGCTAGTTTTTCcgtccccactgaattttatgCT
TTGAAAACAATGGGTTCGAAattcccagccataaaaaaatgggaatatca
atccctgTCGAGTTTTtgtccattatttttacccctACTGGTAGAAAaag
tcccaccgggtctgtgagaagggggtgtttagaTGCACTGTCATGGACGG
AATATTGACCTTTTTTGAGAGCAATCAAACTTTCCAGAATTTCCGATAAA
GACCTTAAAACAAGTGAGTGGAAACCAATTGATACCACCTTCCATTCTAA
GAATATGAAAATGgtagtttttaataaaaaagtttgaaaacgtCAAGTCA
ATAGTCGATATTCTAAACTAAACAACTCTTTGATCAAATTGGAAGATTGA
ATTCTTGATGCTATCGAATTCGACGCTTCTTCACTTCAACCAATTGGTTC
GTCCTTGATGGCATTATTCAGAGATCTGACGATGGGCAATTTGTTTGGGT
ATCTAAGGAAATTAACATCTACCATGGctgtttgaaattttatctGGGAA
CGTCAAGCGCCCTGAGAGCGCCCTGAGAGGGGAGGAAAAGGAACAGTTAG
ACGAATTTGCTGTCTTAATCTCGTAAGAAACGGCCGTAAGAATTTTATTA
GAACCTCTGTTTTCAGGTATGCCAAACGAGAGGCTTAGTTGGTAGAATAC
CTTCCATCAACATGTCAACTTGAAACCGTATAGAAGAAATCTGGGACGAG
CGAGATTATTCGATTTAATTAAGATAATTAGATTTTTAAATCTCTAGCAA
AtccattttgatcattttcatcattggTATTTAATTGAGTTTAATTAAGC
GCCTTATCATTTTTATAAATGAcggtgattttttttaaatgattcatttt
ttttgtatttacaaTTATGGAAAGTAAGTTGTAGTTTGTCTTAGAAACTA
TTGCATGCATTCGAGTGCCATTTCACTTTGAAATGGATGGAGTATAAATT
CGTTTAAGAAATTTCTAGAAACATCTTGTTTTTGTTGAGAAGGAAAGAGT
GCGGTTTTGGCTTTCGTATCTTCAGTTGATGGTTTGAacccttttttttt
acttttttctggtTGGTCGGATTTCATGTTGTTTTTGTTACCGGTGGATA
CCACTTAAAACCTGCAAATATAGAGgtacacacccctgtctcagtgaccc
ggtggcttttaaaatttcaccggggataaaaatttttctttgtaaatcca
gtggggatttttcaaagacagaaaATACCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
AGAAATATTTTGCTCCTGCAAAAATTTAACAGCTATTCTTTAAGATTGTT
AAAATattcctagaaaatgagaccttttaagaaaattaggaagcttcctg
gaaaaaaatctggtatctggttgtgttttcacaattaaatttttaaattt
tttgaacagactgtccgctggaaaattgtttgtgtttttccttaaaatgt
gctcctggattttaagaacagatttCTTTAGGTGatccctggattttacc
tgtgggtgttttgaggaaagtctctcctagatttatccataaaatttact
cctgaaaaaaaagagcagatatttcaaaaaaaattgccggcggctgctct
tgaATAGGCAAGCTGTTTTGAAGTGGCTACTTTCCTAGGAAAGTTGTTAT
TTTGCCCATAAATCAAGATATCAGCAGCATTATTGGAAAGGTCTATGTTC
CCAAGAAGTTATGTTCACCATATATATTGCCATATATATTTGATGAGATC
AACGTCCTCATGATCGCGGACATAAATTTTGTATACCATGATCCTAATGA
CCAGATTATCTCAATGGTACAAGATCGACTATTGGACCAATCGACTCTCA
ATTTAATATTACaccacttttttcggattcgattgtatttgattacgttT
ACAGGAGGgatttaggatttaaaaagaCTGGTGTATCTCTGCTATTATGA
CGTAACGGCTAcataagtgtctaaggaggcgccaccatggttggggcgga
cgggtcaaaaattttttgaaaataggaccctctagattggctaaatatgg
cctcaaatttcaaatttttgacagtaaAACAGCAGTTTTTTGGTCGTAAT
ATAGCAAAATTTCAAGGTCTTTTCAGAGTGGAAAAGGAAAATAATGGGTT
TCCTAGTAGTTTAAAAATTTTTCATACCATAGGGTCCTCCAAGGTTCAGG
TACCCTAAaaaattttaggtacccccaatcattttggtacccccaaaatt
tttagaattctaaagtaaccccccaactttgagttaccccctttttaatt
tttttattgttaaaaatacaaaaagggattttttgctcttttgtcattcc
tgggAAAATACTTCCATGGCGGCAAGCacttctttttcaacaaattcaag
gGTGTCATTTTTGACTATAATTTTCCAGGGtttcaagaaatttttatatg
ccacaaactttcaagggtttctactctcgggtacctaatagccggggggg
cccgctaattaatttttcgacaattttccacccaggacattcttattccg
ccccccctgcttattgatttttgggaaattattttttgaaagttccctct
tttgccctaattctactgtatcagcctccttctcgaacattttccaccca
ggacatttttattccaacccccccgcttattaaattttgagattttttcc
aacccccctgcttattccaaaccccccgcttattaaattttgagattttt
tccaacccccctgcttattccaaaccccccggctattaggtacccgagag
tagggtTTTTAGTTGGTCTTTGctagttttcaaagatttcaaggaACTCT
GTCAACAAAAggagaaaggttgaattttcaatttttgtgtaaAGGAGGGC
CCTTAAATTGgctgataattgataattttacaaCCACCCATTCTATCTTC
CAGACCTGCCAATCTCATATAATTCCAGTGGCACTTAACGGGTTAAGAGG
TAAACCCCCTAAGAATGAGCGTGGAATATCCCCTTGAGTCTCAGGGGTTC
CAAAagtatgttttctcatttttagtcACTGCGTTGTTTGTATCCCatgc
aatgggaaaaattttgtatttctgaaagttaaaatggctgaaaatggcca
caaaatttggcatttcaagggtttcaagggtatCACACAGCATCTTCAGT
GATCCCCAGTATAATATTGACTTTTCAAGGgggtttcaagggtttcaagg
gtatCACACAGCATCTTCAGTGATCCCCAGTATAATATTGacttttcaag
ggtgtttcaagggtttcaaggaattcaagggtgatgacttcatacaaaaa
caacagcccCACCCCCACTAATGAAAATGCAGGTACCCTCAAACATATCA
GGTACcccctaaatttaagaatacttccaggtacctggcttttttaacac
cttttttttaggtacccccaaatctCTATAGTTCCTAAGCCAAGTTGCTT
TTaggccattttgaggcctgagccctttaGCACTGCGTtgcttataaaat
taaaaaccgtAAAGCTAAAAAAGTTATGATANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGG
TCACAAgttttcaaaggtcataatttttaaaccacccattacacacggtt
gttttggctgctggctggctggcagtttactccaagaatgcactccaaaa
atggatggaaaaatggaaacccgaaaTTTTTcatgaccgaccgaccgacc
gaccgaccgaccgaccgaccgactcactttttagaattAGACCCAACGAG
GCAGGACGCGAAATGAACATATTTGCGATTGCCGCCTCATATGCaatcaa
ttcaacaatttttcTCTCAGGTGTCAGGACTCAGCTTCttgcaaagtttt
ccaagtttgttttctCTCTGTCTTCCTTTTTATCATCATATTCACAACAG
TTTACAAAACATCAAACTGACACtgataaaaatccattaaaGTATTCTCA
GGGTCAACAGAAGTCTATTTTCAACccattttaatcatcaaaacTCCATA
AAAGTACATTCTAGACTAGGCCTgttcataaaattcaaaaaattcaaaaa
atcggGATTTTCTAGCCTAGCTGAGGGCGTACTACTTAGGTAAAGTTTCT
TTAAATTTCTTTGGGGTCTAaccatgaagaagaaaattactttttcatAA
CTACCTTAAGTATAGGTATAGGTATATTTATACCTAAAAAGTTTAGGtct
taaattcaattgtgtaatctctaggttcgaaaaacttgattttttgaagg
gatttttgataagattttgaataacttcgaattttacgATACTTTGCGAT
AATCGAAATTTTCGAAATTAggtattttgttttattttattttaaagtat
atttaTAAGAGGGTgtaaaaaaagtaatttataCAATATTAAATTAAGTC
TGGTGGTTCAGAGAGCCCAAAATGCAACAACATTGTGGGTTTTacggggt
atgtggttttaaggggtatctaCTGGTTACGGAAGTATTTTTTATTCGTC
AAGTTTCATATTACAATTTCGAAATTTAGGGTTTGAGACTCTCTCTCTGG
TTGTTAttgatgaaaatatttcaatataaTGATTGATCTGTGGCGGATTA
TTTGCTTTGGTATTATCATGTATTATTAATAATACTGAGaaagaatatga
aaatttaaGCCCTTCCCGGACGTGAGCACtattttcaaaaccaaaaaatt
tgaTTCATGTGAGGagcatccatatagtacgtacgcagtgaagagggggg
aggggtttagcaaaagcgtacgtGTATTGTTTGAATCAcgaaatttctat
tgttctctgtgtACAAAGGGGAAGGGCGgcaaaaatctggaaaatttttg
cgtacgtactttttggaTGACCCCCGATTTATTGATTCTCTGCAATTTCT
TCTCCTTTATCTTGGAGTTTGCTTTTGACTTCCTTTTCGTTTCACAGAGA
GCCAAGATTAAAAACGTGTCTTTAAACATGGAATTGTCATTtgtcatttg
tttatatttggaTAACACAATTGTGATGCTGACNACGTGTCTTTAAACAT
GAAATTGTCATTTGTCATTTGTTTATATTCGGATAACACAATTGTGATGC
TGACAAGGTTCAAAGGTTGAAATCACTACTCTCGAGGAGCATCTCAGCAT
TTAATAAGCACTTCCCCActaattcatttttagaaaaaatctttaaccaA
AATATAGCCGACATAATCTTTGCTTTTAATGGTTCTTGGGCAATCATTAA
GCTAATGACTGATTTATAAAGAGGTTTTTTATGGAGAATTGTTTAATTCT
TTTCCTAATGGCCAAAAAACTTAATTAAAGTTTCTTGGTATGGTGCTCAT
CGTGTGAAAGCTTTAAGTACTGTCAGTATGCAACGATTTTTCTGTCAGGA
TATGGATTGACTTAAGATGACTAAATCTTTGTATTTCTGTGAAATCTCAG
TTCATTCAAAAATAAGTAATATATACGTAGaatctcaaaaattttgttat
cttctttgaagttttttataagaatgataaACTTTCTATCTATGTATTTT
GATCTCTGATATCGGAAATACTTTTCCGTATCGATTTTTTTAAGAGTATG
AAACTATAGAGGCCTTAGGgagaaatatattggcaatacTGGTTGGGCTT
GATTTCTTCTTCCGTTCCTCAAGCTGAGTGGTTTTGGCATTCTTGTAATG
TTCTTATGATTAGTTGTGTTTCGTGACAAAATTAAAAGACGGTGTCAGAG
ATTTCGATGACGTGATAACTTGACCACGAAATAGAGATCAAATTAAGTAA
ATAAACGTTTTGGTCTGAGGAAATAGTGCCATCGTAGCCGTTTTCACTGA
GATTAATACTCTAAATTTGTCCTTGTATATAGTTTTTATGACTTATCTTT
CATTTgaatttttaggtttttgaggtACAGTCGAGTTTCAAAACCTCGAA
AGCCCCTGCCTTTGAGCTATATTAAGCGAATTGTGGAACTCAACTGAACT
CAACTCTAAAATGATTCGACTTTTGATATTTTGGTTGTTGATTCTTAGTA
CAGTTTTCAAATCCTTTCTACTTTATGGAGCTAAGTTTTGTGAAGAAACA
TTGCATGTAGATAAATTTAATTCGAAGTGACCGACAAACTCGGGGAATAT
ATTCAAGTTTATTTTCGAGAAGCTATTGAGTCCCTTTCAATGCTTTATtt
atgacacccctgtctcagttaCTCGGTGGAAGGTTTTAGCCATTGTTATG
GGATCTGTTTTATTGGGtggtatacacgcttttttataaaattggttgta
aatccatttcatcttggatatttttaacttttttgggaaaagcatcctaa
aatattcttacagcttTCTTTTAATatcctaattcatactagaGATTTAA
ATCCAAACTAGTGTTTTTCCTACAAGAAATATAATTGTAGTTTAGCAAAA
GGACAGTTTCTGAGATGAcattgtttgttgttttttcgcACGAACCCACC
AATTTGACATATCCTAAATGAAAGTTGCAAAGGGTCAAACTCATAGAATA
AACACTCTAAAAATAATAGCCTTGACTTTCACTCTACTAAAAGCTGAGCG
AGAAGGGAGACGCGAAAGAGTTTTGCGTGGGCTTCTTATCTTTAATAACA
GAATTTGAAAGCCTCGAGTGTAATTCTTAGCGAGATTGGAAGTGAAGAAG
AGTTTCAAAATAACGAAGTTGACGCAAAAGGTTTTGGGAGTGAAAACTTT
TTGGGAGTGAAAGGGAATGAAATATTAATCTaatgaaatttcgaaatttt
ctggaaattATCCACTGTTTCTTTGCGCCCTTTTCTTCCGATATAACATT
TATTTAATTCAATTTTGTGTTTTCCCACTTTTAGCTTTTATAACGAGTAA
TATATCGTATACACTGTTTTAGGCCATTTACGTagataattatatttttt
tgctgatattttgttaaaatgctaGATGTCGGATAATAGTTTAGGATGAA
GTTTTTCGtgaggaaaaaagaaaacacaaaatttggtcgtttttgaataa
atttatgCAAAGTATTCAGACTGAAAACTTTTCCGAATCATCTAGACGGA
ATCGAGTATTTtcaaagttcgaattagcgagagtccgTTGTAACCTGttt
cgattttatttttcagcaaaaaagatatttattgaatcaaaaaagagaaa
agaaaagatgtCATCAGCGGCACCTTTGAACTTCATTCCCGGTGCAACGA
AACCCATCATCCATTCACCTGAAAGAACGCCCGAACGCCCACGTAAACTT
GAGCGGAACGCCCGTTACAAAAGTATCCCATTACGTTATTCGTCGCGTTC
TACGGAGAACGAAAAAGCCGTCGTTTCGGTTGGATTAGCGGCACTTGCGT
TGTTGGCTCNACGAAAAAGCCGTCGTTTCAGTTGGATTAGCGGCGCTTGC
GTTGTTGGCTCCGCCACGAAGTGAAAATTCGAGTGATGAAGAAAATGTTA
TAGATATTGCGCAATCGATGAGATCTCGTTCTATGACACATATTGAGAAT
TACCATAGATTAAAGAAATCAGACGTTAATGAAAATTATACACAGGACTC
TGCAAGCCATTCTAAAAAAGAACATAAAAAGATTTTACCTTCTAAATTGG
CGAGGAAAGCTAAAAAGGACATGGGCTCCAAACGATGGCGTAGTCTTGAA
AAGTTGCACAATTACACGCTAGGTTAGACTGTGTTTTGAGGAGGAGATTT
GTGAGTCATGGATCCAACCTGAAAGAATTCATGAGGTGGAATTTGGATGT
ACTTGGTAATGTAAATCAATCATTGGACATTTGGAATCTTAGGTTTTGTT
AGGCATGATGTCACATGCTAACGTATTCCTTActtatttattgttctaat
gacaATTACCTTCAGGGATAAAGCCAATATGGGAAATAGATGGGTCTTTA
AAAATCCCAACCCATAAAGAGGATTTTGTCTGACGTCTATGACATGCAAA
CAACGCCACAAAGCTTTTAGCTCAATGAGAAATATTGAAGTTCCTTTATT
TTTTAGAGGGATTCACTTATTTAAACACAGTGTGTCTGATAAAAAGCGGA
ACAAATTTTAGAACCACGAAAACCATCAAGGTAATAAATCTTTATTTTAC
CATTTATAGCCTAATCACggttttttaatataaaaaactaTAGTGTTCAG
TGGTGAGGAGGATTTATATAAATTCTGTACCAATATTTTTCTGAGCACAC
TGTattactacaatcatggtcaaaactGGTGTCCGATGACCCTTTTCCAT
TAGCAAGTCCCCCTCTTCCCCAAAatcaatgttggagttgaaGTTCACCT
TCAGAAGACACCACCATCAACATTGATATTGGGCGGGGGGCGGGGGTAGA
CAAACAGTTATATCAAGGATCGTACATCACTCAGCAATATATTTTATACT
AACAATATTTTATaccatatttaattttttttgtacattttttgacGAAA
ACTCataaaattatttattattgtGTACAGtattagaaaaatttaactac
CATGAAGAGTAATAATGATCTTATTTggaaacaaagatatttttctcgtG
AAAGTCTTCATCCTTTATTTACTCATGGAATTCACACTGCATTTACACAA
ACCGCTGGGGCCCCTACAATGGTTTCATAATGTGCAAAGAAATTAAAATC
TGTTCTAAAAATTGGCAGTCCATACTCTTTCAAACATTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037075XLOC_037075Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058852-exon-scaffold_314-1491911889:552981..553057TCONS_00058852-exon-scaffold_314-1491911889:552981..553057Clytia hemisphaericaexon
TCONS_00058852-exon-scaffold_314-1510915933:552981..553057TCONS_00058852-exon-scaffold_314-1510915933:552981..553057Clytia hemisphaericaexon
TCONS_00058852-exon-scaffold_314-1575043694:552981..553057TCONS_00058852-exon-scaffold_314-1575043694:552981..553057Clytia hemisphaericaexon
TCONS_00058852-exon-scaffold_314-1491911889:564647..566220TCONS_00058852-exon-scaffold_314-1491911889:564647..566220Clytia hemisphaericaexon
TCONS_00058852-exon-scaffold_314-1510915933:564647..566220TCONS_00058852-exon-scaffold_314-1510915933:564647..566220Clytia hemisphaericaexon
TCONS_00058852-exon-scaffold_314-1575043694:564647..566220TCONS_00058852-exon-scaffold_314-1575043694:564647..566220Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:552981..566220 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.42108	0.232092	0.00106795	7.26811e-05	0.00534554	1.34048e-08	1.31567	7.36253e-07	1.3396	2.24051	0.749877	0.000117765	2.66932	1.4998e-05	4.68861	2.27751	0.0312668	5.34996	13.8566	24.9738	0	0.715051	1.3805e-07	2.38752e-05	0	0.121105	4.26098	0.912432	0.00145485	0.0890448
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058852 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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