TCONS_00058866 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058866
Unique NameTCONS_00058866
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1460

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058866 ID=TCONS_00058866|Name=TCONS_00058866|organism=Clytia hemisphaerica|type=transcript|length=1460bp
tttcagttttattttttaaaaaatgtgaaaattagaaatcaaataATGAG
TAAAACTCCAAAATCAAAGACTCTCAGAAGAAGTTTATCGACACCTTATC
AAAAAGGGCGAAGAAGTAGTTCAGGATGTTTCGCACCTTTTAAATCACCT
GCTGCATCTTCAAATACAAAAAATGATTCTGTCACCAATAGAGAAGAGAC
ATCTGAGAAAGTAAAACAACAGATCCCATGTAAATTAAACACGCGACAAC
CTGACAATAAAGTGACGTTAGCAAATGAAGTTGTTCAAATGCACCAAAAA
TGCCAACAACTCGATCAAGAAATCGAAGAGTTAAGGAAAAGTTACGACGA
AGACGAGTTACCGATGTACGTCGATAAATTACACCAATACAATGAGATCA
AAGATGTCGCCCAAATGCTCATCGGAAAAATCGCGGAAAAAGAGAGAACG
ACTACCAAGAGGCTGTATGAGAGATTTGGATTAGACTTGGACGATTGAAA
GCTTTACATGATTTTCGAAGCGAATGGAATTGTGACGTTTATTGCGTTGT
GAAATATTGTTGAAACAGTTGGAGAGATAATTTTACCAAGGGTCATACCG
AATGGCACTGTTCACTGTCTTTTGAAAAGATACcgtattacatgtttttt
tttataagcatttcacttataagcatatctaggctcagatatggggaaaa
attaagcatatggcaaacattacttgagcgtacgaaaaatgtttttttcc
tgattttggctggaattttacggattttcagtatttccctaaatttatgt
ttatttaagcatcccctcaagcatttttcagccttattaagcttttaacc
taagcatctctgagcctgttttctgatttttgtgtgcttataaaaaaaac
atttacttcGAGTAGACAGCTTTAATAAATGCTTTATGAATTTTAGAAGG
GACgttcaaaagaaatttatgaaaatatttataacTAAACTCACtttgaa
agtgaaggagaacCTTACCTCGCCTTTCCATTATTATTTGTGTACAAATA
TGTCATTTTAGGACTAAGGGATGTAGAAACGGGTCAGAATCAGTTCGAAT
GCTAAGAGAATACGATTATCATTCTATATCTAAGTTTTCCTTCTTATCAT
ACGTCCCTACAGGCCTACAACTACTTATTTCAAATAAGCGCCCCTCATAA
AGggttttttatttctaaaaaaaggggcCGTTATTCGAAGGGGCGTTTCA
AAGGAGGGGTCTTTTTGTGTTTGAAGTAATACGGAGGTAACGTAAATTGA
GTTTTCAGCTTTACTTTATCACTTATCCCTCGCTAAACCTTGTTGTTTTG
AGATAAAATATACCCGTTGGTCAGATTAGTTCTGCAGTTTTTGCATGTTT
GCTATGTACAATATGATATACGAATTATTTTTCTATGAAACACAATGACC
AATAATAATT
Run BLAST on NCBI

protein sequence of TCONS_00058866-protein

>TCONS_00058866-protein ID=TCONS_00058866-protein|Name=TCONS_00058866-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
FQFYFLKNVKIRNQIMSKTPKSKTLRRSLSTPYQKGRRSSSGCFAPFKSP
AASSNTKNDSVTNREETSEKVKQQIPCKLNTRQPDNKVTLANEVVQMHQK
CQQLDQEIEELRKSYDEDELPMYVDKLHQYNEIKDVAQMLIGKIAEKERT
TTKRLYERFGLDLDD
Run BLAST on NCBI

transcript from alignment at scaffold_314:112449..123279-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058866 ID=TCONS_00058866|Name=TCONS_00058866|organism=Clytia hemisphaerica|type=transcript|length=10831bp|location=Sequence derived from alignment at scaffold_314:112449..123279- (Clytia hemisphaerica)
TTTCAGTTTTATTTTTTAAAAAATGTGAAAATTAGAAATCAAATAATGAG
TAAAACTCCAAAATCAAAGACTCTCAGAAGAAGTTTATCGACACCTTATC
AAAAAGGGTAATTTATTTCACATTTATCAGTGATAACATTTTTCGTACAC
GTTTATTTTATAAGAACATCCAAAGTTTTTGAAGCCTTCAGATGCTCTTA
ACTTTTTGAGTTTTAAGTCTAAAAATGTTAACATTTTCTTATTTTCGCTA
ATTTTTGAGTATTTTTGTCCATTTTCCTAAGAAATTGGATCTGCGAAGCC
TTAAAATATTCTTGACTTGTTCTTAATATTTTGGCCATCGAAGCTTTATG
TTCTTATATAGTTTGTTCTTATAAAAAAACGTGTATTGCTTACAGTAATA
TTGACAGTTGAATTTTTATGTAGGCCAAGTTTGCAAAATTACATTTGAAC
TCCTCATGGATTATTAGAAAGCAGTAATGCATCGCATAATCATTCATGCA
CTCATAGTGTACCATGCGGTAGATTTGGTCATCGTCATCTGAGCAGGATG
CGAGAGTGCATTGGTTTTGCTTAGCTTCTTCGGATGGTTGTTTTTGTTGG
TTTTTGTCGATATTTTCGTTTCTCCTTTTGTTAGAAAATCAACCATTTTC
GAGGAGCTGCACAAATTGCAATAGTCATTGTTATGTTCTTCTTTATTTTA
CAGGCGAAGAAGTAGTTCAGGATGTTTCGCACCTTTTAAATCACCTGCTG
CATCTTCAAATACAAAAAATGATTCTGTCACCAATGTAAGTCCTTACACT
TTTATCTATTTTTTGGACCTGTCCGTTCGTTTCTTACAAGCTTTTCTCAG
GATCGGCTCATTAGTTTTTTTTGATTTTTTGTACAGTGATACAAAATGGT
GATTCCCAAAAAGTGACGGGGCCCGATTTTCGAAAAAACTTTTGGGCAAA
TTTGGGCCAAAAAGTGCCTAAAAATAGGGTTTTTTGGACTTGAAACGAAC
GTGAAATTGCTTCATTAGTCTTTTCTGATTTTATGCATAAAGATGGAGGA
CAAGGTTCTCTAAAACCTGGCTGAAAAAGTTTTTTTCGGAAAATTTTTTT
TGGCCGTAAAAATCGGATTTTCTTATTTGGGGAAATTCCCTTATGTCATT
TTTAGAGAAAAAAGTTTATTTCTTGCGATTGGATTAATATTTTTTTCTGA
TTTTTAACACTTTGATGTAAAATGGTAATATTTAAAATCTGATGAAGCCC
AATTTTCGAAAAATAATTTTTTTGGGCAAATTTGGTCCAAAATGTGCCTA
AAAATAGGGTTTTCTGGACTAGTTTTTTCTGATTTTTTGGACAAAGATAG
AAAGCAAGGTTCTCTAAAAAGTGGCTCAAGCCTTTTTTTCTGGAAATTTT
TTTTTTGGCCGTAAAAATCAGATTTTCTTATTTTGGGAAATTCCCTTTTG
CCATATTTAGGGAAAATGAGCATTTCTCGTGATTGGCTTGGTATTTTCTC
TTATTTTTGGCATAGTGATATAAAATGGTGATATTTAATTTCTGATGGAG
CCCGATTTTCGAAAAAATAATTCTCTGGGCAAATTTGGTCCAAAATGTGC
CTAAAAATGGGGTTTTCTGGACTAGTTTTTTCTGATTTTTTGGACAAAGA
TAGAAAGCAAGGTTCTCTAAAAAGTGGCTCAAGCCTTTTTTTCTGGAAAT
TTTTTTTTTGGCCGTAAAAATCAGATTTTCTTATTTTGGGAAATTCCCTT
TTGTCATATTTAGGGAAAATGAGCATTTCTCGTGATTGGCTTGGTATTTT
CTCTTATTTTTGGCATAGTGATATAAAATGGTGATATTTAATTTCTGATG
GAGCCCGATTTTCGAAAAAATAATTCTTTGGGCAAATTTGGTCCAAAATG
TGCCTAAAAATGGGGTTTTCTGGACTAGTTTTTTCTGATTTTTTGGACAA
AGATAGAAAGCAAGGTTCTCTAAAAAGTGGCTCAAGCCTTTTTTTCTGGA
AATTTTTTTTTTGGCCGTAAAAATCAGATTTTCTTATTTTGGGAAATTCC
CTTTTGTCATATTTAGGGAAAATGAGCATTTCTCGTGATTGGCTTGGTAT
TTTCTCTTATTTTTGGCATAGTGATATAAAATGGTGATATTTAATTTCTG
ATGGAGCCCGATTTTCGAAAAAATAATTCTTTGGGCAAATTTGGGCCAAA
AAGTGCCTAACATGGGTTTTTTCGGACTTTGGGGGAAAATCACCCTTTAT
CGTCAATTTGGAAATCACAATAAAATATTTATTCACTCCAGTATCTACGC
TTATAAGTCATACCACTTTAACTATACTTCACAGGTCGATATTAATATGA
GCTGTGATACTCATGGTAATCTATTCAAGCTGCTCACTACACTTTCTTAC
TCTCTTGTCTTGCTATTTGTCCTATTTTTATCTGATTTTGATCAACAGGT
CCATTCAGCATGTTGCTTGTTTGTTTTAATAATCGTCCAATCGTCAAATA
GGTGCAATTAGCAGCTTGCTTGTTTATTTGTCATTTTTCTGTTCAAAAAA
GAGCGAGTGGTCCTCGGATATTCAAGTACTGTGCGCAGATTTCTGTAAAG
CCCGAAGGGCCAGATAGAGTGCTTTGGTTGAACAGTTTGCCTTGGTTCGA
TAGGAAATCCTACCTAGGTCACGTGATATTACAATATAATTTTAGCGCTT
GACCAATCAGAAGCTTCGTGAGTTTACGAAAACGATAGCAACAATATTTT
TTGCGATATTTACTTTTTTTTGCTTGGAAAAGCCTAAAATCACGCGATCT
AACCTTTCGGGCTTTACCGAAATTTGTTGTAATGTGGTGGACCCCAAGGT
TTTGAATTATTATATTTTTTTGCTTGTGTATCCTAAAGAAAATCCAAATT
CGACATGATAGAACGACCATTCATCTACCGAGTTTCTTTTTCCTTTAAGT
TCACACTGTGTCTTTACTGCTGCTCAGGTTGAAGATAACTTGTTTACATT
TGTTGAATCCATTCGCCATAGTTTATAAAAAATCAAAATTTATTTCACTA
CATAAAAATAGAAGCATTTCGGCTTACGCCATCGTCAGTATACAAGAATG
GTAAAAAATCACAAATTTGGCTGCGTTTAGACCAGCCTGGCATTTGTAAT
TGCTTGCAGTATTCTTTTGAATTCTATTGTTCCGTGCAATTGTTCGGTTT
GTCAAATGCCTAATGATGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATA
TGCTGATGGAACTTTTGGATGAGATCACTGATATTCCTAATGAAAAACAT
GCAGCAGATAGTAGGAATATTTCACCTAAAGAACCAAACGTTGATCCATC
GAATTTTGATGTAAAAATTGAGATAGAATTTGCTGATTTGGCTAATATCG
AGTTGAAAAAGCTCGACTTTGTCAAGAACTTCTTTACTGCATTGGACATG
AAAGTTTGAAGTGATGAAGATATTGGAAAAGTTTATATGAATTAAGAAAT
GTCTAGACATTTCGAAAAGATCTAGGTGACATTGTGAATTTCTTTTGAGA
GATGCTTTTTCCGATATAATTCCTTTAACGGAACGCGACCAGCTGAGCCT
TGGACTAGATTACAGTTTTGTAGACAAAAATAAACATATTAAAAAGACAC
TCGCGGCTAACCTTGAATGCGTATCCGACCAAGTTACTCCCAAAATTGAA
CCAGAAAAACGTGAAGACTTCCACGAGTTCCTACGTGCGTATACAGATAT
CTTCACCAAAAACGTTTATAAAACACGTGATGATACATATCATAATCTTA
AAAACTTAATCAATAACCGTGATGTTGTTGTTGTACCGGGGGATAAAGAT
TCCTGTGTTGTAATAATGCGAAGAGATGACTACAACAAAAAACTTCAGAA
AATGATCGATGATGGTATCAAAAATAACAAATACGAACCTACCACTGATG
AAACTCTACATGATCTGAAACTTTTCCGTGATTTTATTTATCGTAACTTC
CAGAAACACAAAGACTATCAAAAAATGTTTCCTACTTCTGGTCAACCAGC
TCGTTTGTATGGAACAGCGAAAACCCATAAATTTGAATCAATCGAAGATA
TTGACATGGAAAACTTAAAGTTCAGACCAATCATTGCCCAAACTGGCACA
TATACGTATGGTGCAGCCCAAGTGATTGCAGAATATCTCAAACCACTTTG
CAGTGAAAATTCGTATATTATCAGAAACACTCAAGATTTTCCATCTATCC
TTAAAGAACAAGAAACCCTTTCACCTAACGAAGAATACGTATCGTATGAC
GTTGAATCGCTATTCACGAACATTCCAGTTAAAGATACCATTACATACAT
CCTTGACGAAATTTACCTACGAGATAAATTACCACAGATAGGAAAGAGAT
TCATCGTCGAAAGACTCTTACTTAAACTGACAACAGAAAGTACCTTTATT
TTTAACTCTAAATTTTACAAACAAATTGATGGTTGTACCATGGGAGGTCC
GCTATCCGTAATCCTGGCAGATATATACATGACCAAGATAGAAAACGAAA
TTGTCCGACCCCTCAACCCATCTTTCTACTACCGTTATGTCGATGATATA
ATAACCAAACGAAAGAAAAATCGTCGTGACAATCTCTTCAAAAAACTAAA
TTCTAAGAAATCAAAACTGAAATTTACTTGTGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTCCCCACATGGCATGCCAAATTTATGA
GGGAGTATGTTCATGCGGCCAAAATTATATCGGTGAAACAGAGAGAAATG
TTACGACAAGATGGGCTGAACACGAAATTGTTTACATTTATTTCATAAGT
TTCCAACTATCACTTTAGAGAGAAGAGACATCTGAGAAAGTAAAACAACA
GATCCCATGTAAATTAAACACGCGACAACCTGACAATAAAGTGACGTTAG
CAAATGAAGTTGTTCAAATGCACCAAAAATGCCAACAACTCGATCAAGAA
ATCGAAGAGTTAAGGAAAAGGTATACCACTTTATCGACCTACTTTTATTG
AAAACTTTCCAAGTCTTAAAAAGACTTCTTTTGAAGCGAAAAATTCCATT
CAAAATACGGATTTGTACTCATTCAAGAGCTTTTGACTAAGTGCTTATTG
GCAGTAGCGAATAATCTTTTTTAAAGATTTTCAGTTTCACGGTCAGTCCG
CATACTCTTTGCGGTCGAATTTGGTCTGTAACGGTCAAGGATATGTTCAA
ATTACCCGTTCTTCGGTTCTTTAGCCTATATCGAAAAAAGGAAATGTGAT
TGAAGGAAAACTGAAAATAGTCGCGTCGTTATTTCTTCTTGAAGTTAATT
TCCTTATCTCAAAGAAGAATTTCTATCAAAAGATTCGATCATTTCAACTC
TGATGAAAGAGTTATGAATAATCTCAAACGAGTTTCTTTTTAGATCGGCT
ATGAGACCGGCTATAGGGACATGTTTTTTTAATTCTTACCAAAATGGACA
TTTTGGGAAAAACCTTATTACACCTTTTGTATCCAGTTGTATTTTACAAT
CTTATAATAGTGGTTATCTTAAATAGTCAAAGAACAACATACTGAAAAAT
CTATTTCCAATTCTAATTCTACTTAAAGTTATCCTATTTCAAAGTGCGGC
CCAAAAATGAGCTAAAACTTAGCTTTTTAGCATGAGCAAAAAATTAGCAT
TGAACTTCAACTCTACATAACTCTATCAGTTCTAATGCTATGCAGCTAAA
ATTTTGCAGGGACATCCATACACCTTCTATAAATAATTTCCCGTATGAAT
TAGCATCTAAAAATGGTTGTAGGGCCTAATTGTGAGCAGATTAATTATCT
TATTAACTGGTTGTTGCTTTTTGAAAACCTCTCACTGTGCTAAAAATAAC
TGCTGTATGGCTTTAATTTTGATCAATTATGTTTATTAAACCCTTAATTA
ATGATAAAAAGCTAAATTTTATGATTATAGAGTCATTACAAGGCCTAATT
TCGAGCAAGAATTTAGCTTTAGTCTATTTTCGAATTCTGGAAACTATGAT
ATCTTATTTTAGTCATTATTTGGAAACATTTATAATTTCTTACATTTTGT
TTTAAGTAAAATTCTATTCTATAATGTTTACAGAAACTAACTTCTAATAA
ATTTAGAATAAAACTGCTGTATTATGGACCCAAAATGAGCAATTATTTAG
CATTTCTTCCATAAAGCTAATATTTTGTAAAAATGCTAAATTTTAGCGCA
ATATGCGGCCTAATATCAAGTTTTTTGAAAAAATAAAGTTACTGGACCAT
TATATAAACTATGTGAATTCAAAATTTCAAGGTTTTGTTCCTATAAAACG
ATTTGCGATTCAATAGTAACACTTTTAATCTGGTCTGAAATTGTTGCTAA
TTACTAGCTCAAAACAGGGCCATAGAACAGGAAAATCTGGGCACTTTAAC
AATTTGCATTCAAAATACCTATCCAATTACCAATCTTTTCAGTCAGATTA
AGAAAATTCATGCTCATATGCACAAAATTAGTAATTTAGAATATAGTGTC
AAATGCTAAAAAATAGCTCATATCGGGTCACTACAACGGTTTAGAATTTC
GAAAAAAGTATTTTTGAGGTCCTGTGATCATAACAAATCACTCTAAATTG
CTTTTTTCAAAATTTTGATTTTTTTAAAATGCCATTTTGGTAAGAATTAA
AAAACATGTTCATAGAACCGATAATTGAACTCTAAACTTAATATCTGACG
TGGTCAACTTGGACATTTTAAAACAAGAGTTTAAAGAAAGTCAAAATTCG
GCACGCATATTCTACACATATTAGCCAATTCATGTTCGCGTAAAATTAAA
AAAAGACGAGACTATTAATATTTTGACCGATGAAAGGCTAAGGCTAGTTT
GTACATATCCCTGACTGTATTACGTTAAGTCATCTGATTTGGCTTCTTTT
TCTTTAGTTACGACGAAGACGAGTTACCGATGTACGTCGATAAATTACAC
CAATACAATGAGATCAAAGATGTCGCCCAAATGCTCATCGGAAAAATCGG
TAAAAAAAAGTTCATTTTTCACTTGACGTAATACAGTAAAAATGAAAGAT
TATGCCAACTCCTTGACCACATCCCTAGTATTTCTTTGGCTTTTTGAAGT
TTATTACTGACTGTTTCAGTTAACATGTACAATCATCAGTAAAGTGATAA
TACCCAGGATACACCGGGGGCAAGGTGGATCAACTCCTATCTTGCTCGTG
ACAAGGCTTTTACTAAGAATGACCACATCAACAATACCGTCAACTACTCT
AACTTGGGACTATCTGACAAAACATGGGTTGAACACACGCGATTGTCTGT
GCACTCTAAGAGGAACGAAGAAGTATGATTGATAAACTTGGTGGAGTTAT
CAAAACAGATTTGTTGTCCAAGATATTTAAGTGTAAATACAGGCCAGATA
TATGTTTCGATCAATCGTCCCAAGTTAGAGCAGTTGACGGTACTCTAGCA
ACAAATTTCTTCACTGGGCCTACTTAAGGGTAAGAAATCAAAAAGGCTTT
TCAGTATGTGCGAAAATTAAGGGCTTTAATTGAACGACATCTTCAAAACG
AGTAAGTTGTTGGCCTACTTATCTTTTAATCACTCTAAACGGTTTGATTT
CTCATTTCTGATTTATCTTTCAGCGGAAAAAGAGAGAACGACTACCAAGA
GGCTGTATGAGAGATTTGGATTAGACTTGGACGATTGAAAGCTTTACATG
ATTTTCTAAGCGAATGGAATTGTGACGTTTATTGCGTTGTGAAATATTGT
TGAAACAGTTGGAGAGATAATTNTTTACATGATTTTCGAAGCGAATGGAA
TTGTGACGTTTATTGCGTTGTGAAATATTGTTGAAACAGTTGGAGAGATA
ATTTTACCAAGGGTCATACCGAATGGCACTGTTCACTGTCTTTTGAAAAG
ATACCGTATTACATGTTTTTTTTTATAAGCATTTCACTTATAAGCATATC
TAGGCTCAGATATGGGGAAAAATTAAGCATATGGCAAACATTACTTGAGC
GTACGAAAAATGTTTTTTTCCTGATTTTGGCTGGAATTTTACGGATTTTC
AGTATTTCCCTAAATTTATGTTTATTTAAGCATCCCCTCAAGCATTTTTC
AGCCTTATTAAGCTTTTAACCTAAGCATCTCTGAGCCTGTTTTCTGATTT
TTGTGTGCTTATAAAAAAAACATTTACTTCGAGTAGACAGCTTTAATAAA
TGCTTTATGAATTTTAGAAGGGACGTTCAAAAGAAATTTATGAAAATATT
TATAACTAAACTCACTTTGAAAGTGAAGGAGAACCTTACCTCGCCTTTCC
ATTATTATTTGTGTACAAATATGTCATTTTAGGACTAAGGGATGTAGAAA
CGGGTCAGAATCAGTTCGAATGCTAAGAGAATACGATTATCATTCTATAT
CTAAGTTTTCCTTCTTATCATACGTCCCTACAGGCCTACAACTACTTATT
TCAAATAAGCGCCCCTCATAAAGGGTTTTTTATTTCTAAAAAAAGGGGCC
GTTATTCGAAGGGGCGTTTCAAAGGAGGGGTCTTTTTGTGTTTGAAGTAA
TACGGAGGTAACGTAAATTGAGTTTTCAGCTTTACTTTATCACTTATCCC
TCGCTAAACCTTGTTGTTTTGAGATAAAATATACCCGTTGGTCAGATTAG
TTCTGCAGTTTTTGCATGTTTGCTATGTACAATATGATATACGAATTATT
TTTCTATGAAACACAATGACCAATAATAATT

Coding sequence (CDS) from alignment at scaffold_314:112449..123279-

>TCONS_00058866 ID=TCONS_00058866|Name=TCONS_00058866|organism=Clytia hemisphaerica|type=CDS|length=2490bp|location=Sequence derived from alignment at scaffold_314:112449..123279- (Clytia hemisphaerica)
CGGAAAAAGAGAGAACGACTACCAAGAGGCTGTATGAGAGATTTGGATTA
GACTTGGACGATTGATTACGACGAAGACGAGTTACCGATGTACGTCGATA
AATTACACCAATACAATGAGATCAAAGATGTCGCCCAAATGCTCATCGGA
AAAATCGAGAGAAGAGACATCTGAGAAAGTAAAACAACAGATCCCATGTA
AATTAAACACGCGACAACCTGACAATAAAGTGACGTTAGCAAATGAAGTT
GTTCAAATGCACCAAAAATGCCAACAACTCGATCAAGAAATCGAAGAGTT
AAGGAAAAGGCGAAGAAGTAGTTCAGGATGTTTCGCACCTTTTAAATCAC
CTGCTGCATCTTCAAATACAAAAAATGATTCTGTCACCAATTTTCAGTTT
TATTTTTTAAAAAATGTGAAAATTAGAAATCAAATAATGAGTAAAACTCC
AAAATCAAAGACTCTCAGAAGAAGTTTATCGACACCTTATCAAAAAGGCG
GAAAAAGAGAGAACGACTACCAAGAGGCTGTATGAGAGATTTGGATTAGA
CTTGGACGATTGATTACGACGAAGACGAGTTACCGATGTACGTCGATAAA
TTACACCAATACAATGAGATCAAAGATGTCGCCCAAATGCTCATCGGAAA
AATCGAGAGAAGAGACATCTGAGAAAGTAAAACAACAGATCCCATGTAAA
TTAAACACGCGACAACCTGACAATAAAGTGACGTTAGCAAATGAAGTTGT
TCAAATGCACCAAAAATGCCAACAACTCGATCAAGAAATCGAAGAGTTAA
GGAAAAGGCGAAGAAGTAGTTCAGGATGTTTCGCACCTTTTAAATCACCT
GCTGCATCTTCAAATACAAAAAATGATTCTGTCACCAATTTTCAGTTTTA
TTTTTTAAAAAATGTGAAAATTAGAAATCAAATAATGAGTAAAACTCCAA
AATCAAAGACTCTCAGAAGAAGTTTATCGACACCTTATCAAAAAGGCGGA
AAAAGAGAGAACGACTACCAAGAGGCTGTATGAGAGATTTGGATTAGACT
TGGACGATTGATTACGACGAAGACGAGTTACCGATGTACGTCGATAAATT
ACACCAATACAATGAGATCAAAGATGTCGCCCAAATGCTCATCGGAAAAA
TCGAGAGAAGAGACATCTGAGAAAGTAAAACAACAGATCCCATGTAAATT
AAACACGCGACAACCTGACAATAAAGTGACGTTAGCAAATGAAGTTGTTC
AAATGCACCAAAAATGCCAACAACTCGATCAAGAAATCGAAGAGTTAAGG
AAAAGGCGAAGAAGTAGTTCAGGATGTTTCGCACCTTTTAAATCACCTGC
TGCATCTTCAAATACAAAAAATGATTCTGTCACCAATTTTCAGTTTTATT
TTTTAAAAAATGTGAAAATTAGAAATCAAATAATGAGTAAAACTCCAAAA
TCAAAGACTCTCAGAAGAAGTTTATCGACACCTTATCAAAAAGGCGGAAA
AAGAGAGAACGACTACCAAGAGGCTGTATGAGAGATTTGGATTAGACTTG
GACGATTGATTACGACGAAGACGAGTTACCGATGTACGTCGATAAATTAC
ACCAATACAATGAGATCAAAGATGTCGCCCAAATGCTCATCGGAAAAATC
GAGAGAAGAGACATCTGAGAAAGTAAAACAACAGATCCCATGTAAATTAA
ACACGCGACAACCTGACAATAAAGTGACGTTAGCAAATGAAGTTGTTCAA
ATGCACCAAAAATGCCAACAACTCGATCAAGAAATCGAAGAGTTAAGGAA
AAGGCGAAGAAGTAGTTCAGGATGTTTCGCACCTTTTAAATCACCTGCTG
CATCTTCAAATACAAAAAATGATTCTGTCACCAATTTTCAGTTTTATTTT
TTAAAAAATGTGAAAATTAGAAATCAAATAATGAGTAAAACTCCAAAATC
AAAGACTCTCAGAAGAAGTTTATCGACACCTTATCAAAAAGGCGGAAAAA
GAGAGAACGACTACCAAGAGGCTGTATGAGAGATTTGGATTAGACTTGGA
CGATTGATTACGACGAAGACGAGTTACCGATGTACGTCGATAAATTACAC
CAATACAATGAGATCAAAGATGTCGCCCAAATGCTCATCGGAAAAATCGA
GAGAAGAGACATCTGAGAAAGTAAAACAACAGATCCCATGTAAATTAAAC
ACGCGACAACCTGACAATAAAGTGACGTTAGCAAATGAAGTTGTTCAAAT
GCACCAAAAATGCCAACAACTCGATCAAGAAATCGAAGAGTTAAGGAAAA
GGCGAAGAAGTAGTTCAGGATGTTTCGCACCTTTTAAATCACCTGCTGCA
TCTTCAAATACAAAAAATGATTCTGTCACCAATTTTCAGTTTTATTTTTT
AAAAAATGTGAAAATTAGAAATCAAATAATGAGTAAAACTCCAAAATCAA
AGACTCTCAGAAGAAGTTTATCGACACCTTATCAAAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037082XLOC_037082Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058866-proteinTCONS_00058866-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058866-exon-scaffold_314-1575043694:123173..123279TCONS_00058866-exon-scaffold_314-1575043694:123173..123279Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1575043694:122495..122576TCONS_00058866-exon-scaffold_314-1575043694:122495..122576Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1575043694:116210..116361TCONS_00058866-exon-scaffold_314-1575043694:116210..116361Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1575043694:114181..114272TCONS_00058866-exon-scaffold_314-1575043694:114181..114272Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1575043694:113483..113556TCONS_00058866-exon-scaffold_314-1575043694:113483..113556Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1575043694:112449..113401TCONS_00058866-exon-scaffold_314-1575043694:112449..113401Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1510915933:123173..123279TCONS_00058866-exon-scaffold_314-1510915933:123173..123279Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1510915933:122495..122576TCONS_00058866-exon-scaffold_314-1510915933:122495..122576Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1510915933:116210..116361TCONS_00058866-exon-scaffold_314-1510915933:116210..116361Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1510915933:114181..114272TCONS_00058866-exon-scaffold_314-1510915933:114181..114272Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1510915933:113483..113556TCONS_00058866-exon-scaffold_314-1510915933:113483..113556Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1510915933:112449..113401TCONS_00058866-exon-scaffold_314-1510915933:112449..113401Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1491911889:123173..123279TCONS_00058866-exon-scaffold_314-1491911889:123173..123279Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1491911889:122495..122576TCONS_00058866-exon-scaffold_314-1491911889:122495..122576Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1491911889:116210..116361TCONS_00058866-exon-scaffold_314-1491911889:116210..116361Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1491911889:114181..114272TCONS_00058866-exon-scaffold_314-1491911889:114181..114272Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1491911889:113483..113556TCONS_00058866-exon-scaffold_314-1491911889:113483..113556Clytia hemisphaericaexon
TCONS_00058866-exon-scaffold_314-1491911889:112449..113401TCONS_00058866-exon-scaffold_314-1491911889:112449..113401Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:112449..123279 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.2214	26.788	23.1674	21.4355	9.48622	7.5333	6.97304	6.44541	6.26574	5.71204	4.27248	5.35313	5.01374	4.13093	8.2266	6.83959	9.39956	8.17926	5.44825	6.64208	7.40862	6.23488	15.1031	14.0148	21.4166	16.8964	23.442	13.8508	18.3745	15.8184
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010760DNA-repair_Swi5
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058866 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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