TCONS_00058893 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058893
Unique NameTCONS_00058893
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3284

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058893 ID=TCONS_00058893|Name=TCONS_00058893|organism=Clytia hemisphaerica|type=transcript|length=3284bp
ATTGGACTGGCTAATCTCCAAAGTGAAAGTTCAATCGATTTTGCGCGCAA
AACATTCAAAGATGCAAATAATCTAGACATTGATTGTGCTGTGGTCTGCG
TCTTTTACGCTCAATTCGAAGTGCGTCAAAATAGAAAGAGTGAAGCTACA
AGTATCATTCGGAATGGGAAAATGGACGGACGAACGCCACGTTTCTTGCT
CAAAAATGCTTATCACAACTTGAGAGATAATAAGAGTAACTTATTTGATG
GGATAACCGACCCTTGGGATGACTCATTGCACGATATCACCGCAACCGCT
ACAATCAAGAGCAACCCGGAAAGATCACCAATTAATAAACCCATCCCACT
GAACGGGTATTCAAACAGTACACGTAAAATGTTACATCTCGGTAAACCAA
CACGATCAGGGTCCAGCCTTCTAAAAGAATCAACGCCAAAAAGCCCTACG
GAAGAAGTGAAAGCTAAGTTAGGATTAATCGGATGCTCAGCATCAAAACC
GCCCAATGTTTCGTTGGAACCGGTACGACCGCCCAGCTCTGAGAAAGAGG
ATTCGGATGAAAAACAATACCGCCCTACCTTATCACCCTTCAGTCTTACC
GCTAACACACCCAAAGTTAGTAAAGAAAAGAAAAAGTTATTCGAAACACC
ACAAGGGTTTAATTTCAATATTTTTGAGAGTTTATCTAAACAGCAAACGG
AAAAGAAACGTGCTCAAGATGAGGCCGTCAAAGACATTGTTACCAGTTTA
GATTTCCAGAATTCGTCCTTAGACGAAGGAACTGTTCCAATAACAAATGA
AACTCTCGACGACGAACAACGCTCTGTTTTCCTTGAAAACGAAGGTACGT
GCTGTATTGGGGACCAAAGTGCAGATGTCAGCAATCAGCCTAACTACCCA
CAAGAAGTCAAACAGAAGAAATCCTCAAACTTTGACAAGATATTAGCACA
AGTCGATGATGATATTAAAAAATCAAGAAGCCTTCTTAACCAGACCGAAC
ACAAAACCAATCTTGCTTTGTTTCAAACTCCTATCAACAAAAATAGAAAT
GCGAAGTTCCAAACACCAATTGATAAGATGAGTATCAAATCTGATATCAA
CCATGGAAGATATCCAACACCGATCAACGTTGTCGATTCAAGAAAACCAC
CGTTCGAAACACCAAGAGATAAATTAGAGATGCGAAAAGCCGAAGATCTT
GTTCAAGGCACTTGCCCTAAGAGAGCTAAAGGGCCACCATCAAGTAGAAA
GCCACTCTCAGAAATCAAAGGACCGAGAAATCCAGACATCgctaaagaaa
atgcttttaattTTCATCTCAAGAAACGTATACCATTCAAAAATCTGTCA
ACGCCTGGGAATAAGcctagggaaattccccatgaCCAAAAACAGTCTCA
CGGTCAGCCACTAGCCAAGACAGGTTTAACTGAACTTATCCAATCTATAG
ATTTACTCAAGGATAATAGTCCGCCAAGTCAAGGAGACGTTGTAAATGAT
CACGTTTCTAAATTATCACAACCTTCTCAGAATAGCAATACGATCATAAA
CACTATGCACAATACCGGTAGTTCACAACCCACTCAGACTATTATAAATA
AAAAGACTGAACCAATAAGTGAACGACAACAAAATCGAACTCTATTGTTG
AAAAACAGCGAATCTAAAATTGCGGACAATACAAATAATAACGATAAAAC
TTATTGTGTATCACAACAACAGCAAAAAACCAAATCCACCAACACAAATC
AACCTCGTCACCAACCTTCTTCACAAAACAGAGATATACCAGTTATTCCT
ACACCAAAAGAGACTTCACCTCCCAATATGAACAACCAATTACAAAACGC
AATAGAAACACTTGGTATGAACGGCTTCAATATGGGTCAAATTCTTGATC
CAGTTCCTTCAGACTCTAGATTCATAAAAATCAATGGGAGACCGTACACA
CGCGTTAAAAAGATTGCCAGAGGAGGCTTTTGTAAGgTATACGAAGTCGC
GAACGGAGAAGGTGTATTGTTCGCATTGAAGAAAGTGAATTTAGATGAGT
TAGATTCCTTCATGATTGATTGTCATTTGAATGAAATCGAATTGTTGACC
AAATTGAGGGGAAATCCGTTCATCATTACACTTTATGATTGGGAGAAAAC
GGACGAGAGTCTTTTGCTGTTGATGGAGGAAGGTGACCAAGACCTCGCCA
AAACATTACGGAAATATACCGGTAAAGTGCCAATGGATAAAGTCCAACAA
TATTGGGAACAAATGTTGCAAGCAGTGAAAATTGTTCATGACCAGGGCAT
TGTCCATGCTGATTTGAAGCCGGCCAATTTCTTGTTTGTTGGAACAGCCC
TCAAATTGATCGACTTTGGAATATCCAACAGTTTACAGTCGGACAAGACG
AGCATAACACGTGAATGTGTGATGGGCACGTTGAATTACATGCCCCCTGA
AGCATTGTCGCCTGATGCATCTCATGAAAATGGAGCCTCAAGGaTTTCGC
GGGCATCGGATGTGTGGAGTCTTGGTTGTATGTTGTATTTGATGATTTTC
AGACGAACACCTTACCAACACTTGACCAATCGTGTTAAGATTCATCAAGC
CATTCGTGTCGGTCAAAATATCAACTATGAAGGAATCGAGGATCCGGTAT
TGTTGGACTGTCTGCAGGGTTGCTTAAATTTCAACAAGCGACAGCGATAC
ACGATCGAACAACTCTTGCAACACCCGTTCCTCAAGTAAGAAATACCTTT
TATCGTTGCAGtttcattttaaaagaaaacacaTAACAAACGGAATTTTT
AGATCAGATTAAAGTTACTTTATTTTAATACATACATTTTTGTTGGCAAC
Ataacttttagttttaattttaagtattttggtaaaaaaagtatataatc
AATTGACATCAATACCCAGTGCGCTAGTAAGCTTGATGGAGCGTCTTTAT
ACTTCTAGTTTTGTTTAAAGGCCTCGAATTCAATTAAAATTAAGGGCCAA
GTTTTCAATGACCAATTTTTCTACTCTCGTCTAGTGTTTTGACTCTTTGC
ACTTAATGATTAGATCTCCCTTTCAACTTGCTAGGAATTATTGACAACCT
CGTTAGATACAgcgttatgttttattttaaccAAATTGGCTTGTATACAT
CATCATGAAATTTTACTCCATTTTTCTTTCCCGtagaattttcttctttt
ttttgtatTCATGTTTTTATAGACAAAATGTAGTTATAATTGTAAATTTA
CAagtaaattgattttgatttcgaCAAAAAATAC
Run BLAST on NCBI

transcript from alignment at scaffold_314:459320..471346-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058893 ID=TCONS_00058893|Name=TCONS_00058893|organism=Clytia hemisphaerica|type=transcript|length=12027bp|location=Sequence derived from alignment at scaffold_314:459320..471346- (Clytia hemisphaerica)
ATTGGACTGGCTAATCTCCAAAGGTATATTTGTTTTATCGACTTTCGTTT
TCAAATTCTTTGTAATATTTAGGCGTTACCTCTTCATCTCCGCACTTTTT
GGTATCTGAGAATGTTTTAACGTAAAGAGCAATTGACTTTTGATTGATTT
TAGATTGTAATCAGCCCATTTTAACGATGAAATGTATCTTTTATAATTGT
TCAAGTTCAGAGATGTTTTCCGGATGGAATTTCGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCAGAGATGTTTTCCGGATGGAATTTCGGATCCAA
AAGTGCTCTTCATCATTGTTTCATAAAATATGGAGATCGTGTGACATGTT
GAGACCATCAGAATAAATCAAAGAGCCACGTAACTCTCATAATTCCAAAG
TTCATAAAATCTAATATTTTGGAATATTGAATCCTTCTTCGCTCCTGGGA
CCGAAACCAAAGCTCTAAGCTCGTGTGCTCCACCTTTTTGGAAGATTTCA
TCCCAAAATCCTTGTTGAAACTTATATTATTCAAGAAAAACCGTTTTTTA
GAAAATTTAATGTCACGTTTTCGCCAAAAGTGTAAAAAACACCGACATAG
AAAAATAAACAGTGGAGCCCAATCAAAAATGGTGCGACATTTAGTGTGAC
ATTTTGAAAAATGCCCAAAAACAACTTTGTAATCGATAAGTCTTGAAATT
TTACAATGTTGTAGGAAATACTAAGACATAATGAATAAAAATTCTTTTTT
CGTTTAATTGGGTTAAAAATGTGGCTTCAACTCAAAATTCGGCTTCAACT
CAAAATTCGTATCTTTTTTAGAAATGTAAGCCACACAAATTAGATAAGAG
ATCTTAGAATGGGACTTTCTTAACTTGACAGAGGAAAGGTTGAATTAAAA
AAAAAACAAGTTAAATGTGTATACTTTCTAGCTGTTAGATATACTTTTTT
GTGGCTTACTTTTCGATAATTTTCAATCTAACTTTGTAAGGCACAAAATT
GTACTTACAACAAAATCTTTGTAATTTTTTACACGTACCAGCACCTACTG
GTGTTATACTTTAATAATGGAGTGCCAAAAAACAAAAATTGCGTGACATA
AAATTTCACCTATATTTAACCTATATTTCACCTATTCACCTATATTTCCC
TTGTGTAAGCCACATTTTTGCCCACTTACTTAACAAACTGTAAGCCAAAA
ATCAGTGCAACCAATGAAAAATTTAGCCCTTTGCTGGCAATGCTGAAAAG
AAAGTATATTTCTGACTGTTTCCATTATTGAGAACTCAGCCTTCAAAATT
TCTTGGTCGGGCAAAAAAAAAAAAAAATGCAGTGTTTCAGGAAACCGGCC
GGCCGGGTGAAAAAAGAAAATTTTGACCCGGCCGCAGACTATTGGTTCAA
ATAATCACTATATGGTTCATCATAAAGAAGATCAAGTTGACCGTTCAAGC
TATCAAACGTCATTTGGTTAAGATATTCCCGCTTGTAAATCAAGTTTCGT
TTGTTTGTAGTTGATACATTAGTATTCAGGGCTTACTCCATACTGTTTGT
ACTAAACCAGCGTCCGAGATTCAGAAAAGGCAAATTTTTGATATTATGCT
CATAATAGGGTGTAGAATTGACAAAAAAAATTTGCCCTTCGAATCTCATG
TAGTTTTCGAGTGAATCGATTTTTGGTTAACTGATAGAACTTATCAACGG
TTTTTTCGAAGCCTGAAAATCAAATATCTGAGGTTACCAAAGGATTCAGC
GTGAAAATTAGGTAAAGAAAATGGGGTTATTTGTTAATTTTCGACCACCT
GGTGCCAAGAAATGGCGTTTTCCGATGACGTCAGCATTTTCCTAGCAGCA
TTTTCAGAAAAAGGTTTTTCCTCACAGCTGGATAGTCCTGAATTAGTAGT
ATACAAAAATGGTATGGTTTGTTAACTTTCGATGTCTAGATCTCGAGATA
TTTTGGTTTAAATATTGAAAATTATCGATATTTTTTGCTGAATCAGCAGT
TTTTCAGCATATTTACCAACCTTAAAAATGAAATATACACCCTATTAGAG
ACTGACGTGTTTTATTTTCCTTTTTTACTCAAAAATTTCGCAATATTTTT
TTCTATTATATTCAGTGAAAGTTCAATCGATTTTGCGCGCAAAACATTCA
AAGATGCAAATAATCTAGACATTGATTGTGCTGTGGTCTGCGTCTTTTAC
GCTCAATTCGAAGTGCGTCAAAATAGAAAGAGTGAAGCTACAAGTATCAT
TCGGAATGGGAAAATGGACGGACGAACGCCACGTTTCTTGCTCAAAAATG
CTTATCACAACTTGAGAGATAATAAGAGTAACTTATTTGATGGGATAACC
GACCCTTGGGATGACTCATTGCACGATATCACCGCAACCGCTACAATCAA
GAGCAACCCGGAAAGATCACCAATTAATAAACGTAAGTTGTTTTAGCTAC
CAAGTCTTTTTTATTCGAGTTAATCTTAGTTCATCTTCTTGATTTCGACA
TCTGAGATACAAAAAAGTGGAGATGGAGAAATTTTTGACTTATCGAGTTC
ATGTTAAAAGTAATGGTACTACAAAATCATTATTTAATAAATATTAGTAA
AAATATTCAAAAACAGGCGAGTAGACATCAATTTGAAAAACCATTGTTAA
GAGAAGACTTTCAGACCTTATTTTTTTTGCTGATTATGATGATCGATTTT
AATATAAAAGGTTTCGTGAAACACTAATTGCGACCACCAAGTCCTATTAG
TTCCATCGGTGTTCTGTCGAATAGAAATCCTAATGTAACATGCAAAAGAA
TATCAGTCCCTTTTTTCATCATAAAGTTAACATAGCGTCAACCCCCTTGA
CATGGGGGGGGTTACACCCAAAAAATTGCAAACGAAAACTGGGAGCTAAA
ATACAGCCAAATATTTGGGAGGATCTGATATTGGGGGGAGGGGGCTGGAT
TTTCAATGGCAAGGCTGGAGGCTGGCTGTTTCTTCTGTTATTTTTCTTTA
TATCACCACATTTTTATCCCAAAACCTTTCATTTTACAGTCTATTGAATA
TGTATGTTTTCACTTGTGTCTACCATCACGAATTAACAATTATAGTCATT
ATTAGTCAATTAAGCCCGTTAAGATTTCGAGAATGGCTATTAGAAAAAAG
GAATTTTTTGCTGGAAAAAGACGTTACTAAAGTCAGGGAACCGTTTTTAG
ATTCTAAGCTTTGTTGAAAACACTATATTATTTCCAGTAGCGGCCTGGCT
TAATTTTCTTGGTGGTGCAAACTATGAAATTGGCGCCCCTAGTATTTTTG
TCCTTATTTGCGCCCTATACCAGTAAGTGAAACTATTANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CGGAATCTCTGAGTTAACAAAGTTTTATTTATACGAAGGTGGTGGTAATG
ATAATTTGATATCTATTTCCTTGTTATTTCCTGGTCTTGGACTGTACTCT
CCATTAAAGCAGGGCCGGCGAATCGGTTTTAAAAGTGAGGGGGCTAAATG
ATATAGTGACTAAGGAGGCCCCATCATGGTTGGGGCCGACGGACCGGAAA
TTTTTGAAATTATGGTACTCTACATTGGCTTAGAATTGGCCTAAATTTAA
TTTTTATGAAGTTATTGGAATGAAAAAATCAAAGAAGTTAGGTGTCTTTT
TATACTGATAATCACCAAAGAATATACTACCATATAATAACAAAATGAAA
CCTATAAGATAGGATAAGAGTCTTTGTAATTTGGTAAGTAAATAATAAAG
TTACCACGTTTCTTATTTTCTTTTTTTCTCTCACCCTCTCTTTTACTTTC
TCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTGCAAAAAAGTGGAGGGGCT
ATAGCCCCCCTAGCCCCCCCCCCCCCGGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGTTTTTGTCG
GGAAAAAGTCAAAATGGAAGTTTGAAAAAAGTCAAAAAAAAGTCAAAAAG
TCAAATAAAAGTAAAAAAAAAGTCAAAAAGTCAAATGAAAATTTAAATAG
TCAGAAAGTATCATACACCTTTTTTCAAGTGATTTACCCCTCGATGAAAC
CTATAAGATGGGATAAGGGTCTTTGTAATTTGGTAAGTAAATAGTAAAGT
TACCACGTTTCTTATTTTCTTTTTTTCTATCACCCTCTCTTTTACTTTCT
CTCTCTCTCTCTCTTTTTTTATTTTTTTGCAAAAAAGTGGGGGGGGGCTA
TAGCCCCCCTAGCCCCCCCGGTTTCGCCGGCCCTGTAAAGATCAATGGCT
GAAAGAGGCCCCAAAAATTCGAAAGTTGGCAAGAATAAGGGTTCTTTGTA
ATTCTAGCGCCGCAGGCAAAAAAATTTGGTGCAAGAAAGGTCAAACAGCT
TATAAGATATTCTAAAAAGGAGAAAGTTAACCCGCATAAGACCACAAAAA
CCACAGCGAGCAGTTTCGATCAATCTCTCATTTTGGGGGTGAGCATCCTC
TTTAACCCCTGGTAACACTTCTCTTGCTTTGACTTTTCGCAATTCAATGT
TGATAGTAGTTTTGAAAAAATTCGTAAAATAAAATGAAGCGCCGCAGGCG
AAACAAAAATTACATTGAACTTATAGAAGGCGCTAAAAACGTGTCAAAGG
GCGCAAAATCGCCCAACCAAACATCAAAAAATTTTTGCGCCCCCTTGAAA
AGCTTTTTTGGCGCCCCTCTCAGGTCTTTCTGGGTGGTGCACTGCACACC
CTGCACCCCCTGCCAGGCCGCCACTGATTATTTCATTCAAAATAAATCAA
AACGTTTCATTTTAGCCATCCCACTGAACGGGTATTCAAACAGTACACGT
AAAATGTTACATCTCGGTAAACCAACACGATCAGGGTCCAGCCTTCTAAA
AGAATCAACGCCAAAAAGCCCTACGGAAGAAGTGAAAGCTAAGTTAGGAT
TAATCGGATGCTCAGCATCAAAACCGCCCAATGTTTCGTTGGAACCGGTA
CGACCGCCCAGCTCTGAGAAAGAGGATTCGGATGAAAAACAATACCGCCC
TACCTTATCACCCTTCAGTCTTACCGCTAACACACCCAAAGTTAGTAAAG
AAAAGAAAAAGTTATTCGAAACACCACAAGGGTTTAATTTCAATATTTTT
GAGAGTTTATCTAAACAGCAAACGGAAAAGAAACGTGCTCAAGATGAGGC
CGACAAAGACATTGTTACCAGTTTAGATTTCCAGAATTCATCCTTAGACG
AAGGAACTGTTCCAATAACAAATGAAACTCTCGACGACGAACAACGCTCT
GTTTTCCTTGAAAACGAAGGTACGTGCTGTATTGGGGACCAAATTGCAGA
TGTCAGCAATCAGCCTAACTACCCACAAGAAGTCAAACAGAAGAAATCCT
CAAACTTTGACAAGATATTAGCACAAGTCGATGATGATATTAAGAAATCA
AGAAGCTTTCTTAACCAGACCGAACACAAAACCAATCATGCTTTGTTTCA
AACTCCTATCAACAAAAATAGAAATGCGAAGTTCCAAACACCAATTGATA
AGATGAGTATCAAATCTGATATCAACCATGNAACACTTCTCTTGCTTTGA
CTTTTCGCAATTCAATGTTGATAGTAGTTTTGAAAAAATTCGTAAAATAA
AATGAAGCGCCGCAGGCGAAACAAAAATTACATTGAACTTATAGAAGGCG
CTAAAAACGTGTCAAAGGGCGCAAAATCGCCCAACCAAACATCAAAAAAT
TTTTGCGCCCCCTTGAAAAGCTTTTTTGGCGCCCCTCTCAGGTCTTTCTG
GGTGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCGCCACTGATTATT
TCATTCAAAATAAATCAAAACGTTTCATTTTAGCCATCCCACTGAACGGG
TATTCAAACAGTACACGTAAAATGTTACATCTCGGTAAACCAACACGATC
AGGGTCCAGCCTTCTAAAAGAATCAACGCCAAAAAGCCCTACGGAAGAAG
TGAAAGCTAAGTTAGGATTAATCGGATGCTCAGCATCAAAACCGCCCAAT
GTTTCGTTGGAACCGGTACGACCGCCCAGCTCTGAGAAAGAGGATTCGGA
TGAAAAACAATACCGCCCTACCTTATCACCCTTCAGTCTTACCGCTAACA
CACCCAAAGTTAGTAAAGAAAAGAAAAAGTTATTCGAAACACCACAAGGG
TTTAATTTCAATATTTTTGAGAGTTTATCTAAACAGCAAACGGAAAAGAA
ACGTGCTCAAGATGAGGCCGTCAAAGACATTGTTACCAGTTTAGATTTCC
AGAATTCGTCCTTAGACGAAGGAACTGTTCCAATAACAAATGAAACTCTC
GACGACGAACAACGCTCTGTTTTCCTTGAAAACGAAGGTACGTGCTGTAT
TGGGGACCAAAGTGCAGATGTCAGCAATCAGCCTAACTACCCACAAGAAG
TCAAACAGAAGAAATCCTCAAACTTTGACAAGATATTAGCACAAGTCGAT
GATGATATTAAAAAATCAAGAAGCCTTCTTAACCAGACCGAACACAAAAC
CAATCTTGCTTTGTTTCAAACTCCTATCAACAAAAATAGAAATGCGAAGT
TCCAAACACCAATTGATAAGATGAGTATCAAATCTGATATCAACCATGGA
AGATATCCAACACCGATCAACGTTGTCGATTCAAGAAAACCACCGTTCGA
AACACCAAGAGATAAATTAGAGATGCGAAAAGCCGAAGATCTTGTTCAAG
GCACTTGCCCTAAGAGAGCTAAAGGGCCACCATCAAGTAGAAAGCCACTC
TCAGAAATCAAAGGACCGAGAAATCCAGACATCGCTAAAGAAAATGCTTT
TAATTTTCATCTCAAGAAACGTATACCATTCAAAAATCTGTCAACGCCTG
GGAATAAGCCTAGGGAAATTCCCCATGACCAAAAACAGTCTCACGGTCAG
CCACTAGCCAAGACAGGTTTAACTGAACTTATCCAATCTATAGATTTACT
CAAGGATAATAGTCCGCCAAGTCAAGGAGACGTTGTAAATGATCACGTTT
CTAAATTATCACAACCTTCTCAGAATAGCAATACGATCATAAACACTATG
CACAATACCGGTAGTTCACAACCCACTCAGACTATTATAAATAAAAAGAC
TGAACCAATAAGTGAACGACAACAAAATCGAACTCTATTGTTGAAAAACA
GCGAATCTAAAATTGCGGACAATACAAATAATAACGATAAAACTTATTGT
GTATCACAACAACAGCAAAAAACCAAATCCACCAACACAAATCAACCTCG
TCACCAACCTTCTTCACAAAACAGAGATATACCAGTTATTCCTACACCAA
AAGAGACTTCACCTCCCAATATGAACAACCAATTACAAAACGCAATAGAA
ACACTTGGTATGAACGGCTTCAATATGGGTCAAATTCTTGATCCAGTTCC
TTCAGACTCTAGATTCATAAAAATCAATGGGAGACCGTACACACGCGTTA
AAAAGATTGCCAGAGGAGGCTTTTGTAAGGTAAGCAATTTGTGGTTCTTT
TATAATAAGTTTAAAAGGCTACAACTTTGAGGCAGCCTGATCAAATTGTC
GAATTTAGCAGAAATTTGGTACATCTTTCATCAAGCAACTTCAATGGTTT
CTTATAGCCAGAAAAAATACTGAAAATTACGGTGCGTACGTTTGCTTCTT
TTTGTGTTTTTTTTTTCATATTTTTATCAAGACTTTTTGAACGAGCCCAC
CGTACCGGGTCCGCTAGAGTTCTTTGGTGATTTCGACTGTGCTACAATAC
ATATTATATGTTACTTACTGGCACCTCTTCGCAGCCTANCTTCACAAATT
GTCGAATTTAGCAGAAATTTGGTACATCTTTCATCAAGCAACTTCAATGG
TTTCTTATAGCCAGAAAAAATACTGAAAATTACGGTGCGTACGTTTGCTT
CTTTTTGTGTTTTTTTTTTCATATTTTTATCAAGACTTTTTGAACGAGCC
CACNTCTTCTTTTTGTGTTTTTTTTTTTTTCATATTTTTATCAAGACTTT
TTGAACGAGCCCACCGTACCGGGTCCGCTAGAGTTCTTTGGTGATTTCGA
CTGTGCTACAATACATATTGTATGTTACTTACTGGCACCTCTTCGCAGCC
TATAGAAGTAATTTTCATTATTTTGATCAACTTCAACAGTTATGGTAGTG
ATGTTCTTTTTTCTTTCATTTCAGGTATACGAAGTCGCGAACGGAGAAGG
TGTATTGTTCGCATTGAAGAAAGTGAATTTAGATGAGTTAGATTCCTTCA
TGATTGATTGTCATTTGAATGAAATCGAATTGTTGACCAAATTGAGGGGA
AATCCGTTCATCATTACACTTTATGATTGGTAGGTCGGATTATTTTTTTC
TATTCCAATAAACCCTCGCAAAAACTTATGCTGGGCAACTCGTAACGTAG
CTTATATAGCACAAGGAGTGTCCCTGTCTAACTACATAAGAGCAATAGCA
TAGTATGAACCCCCCCCTTTTTTTAAGGGGGGGGGATCCGAGTTGTCACG
GAAGGCTTTATAGGGGGGGATGGGCAATTTTCCAGTTAAAATGGGGGGTT
TGAGCTTATAGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAATAAGATTCAACTCGGGCGCTTCTATAAAGATTGGTATTGCATTCAA
GTCATTAAGTGACAAGTTATGATTTGTTCTTTCCTATGTATCAGCAATCA
AATTGAGATTAGTAACATCTGAGACTGTAGACTTTTTATTCCGTTAGCTG
ATTTTACCTTAGTCAAAGGAGGAAATTTTGGCGGTCAAAACTTCTTCCTC
TAGCTCTAATGTCATTCTATTTGTCACAGGGAGAAAACGGACGAGAGTCT
TTTGCTGTTGATGGAGGAAGGTGACCAAGACCTCGCCAAAACATTACGGA
AATATACCGGTAAAGTGCCAATGGATAAAGTCCAACAATATTGGGAACAA
ATGTTGCAAGCAGTGAAAATTGTTCATGACCAGGGCATTGTCCATGCTGA
TTTGAAGCCGGCCAATTTCTTGTTTGTTGGAACAGCCCTCAAATTGATCG
ACTTTGGAATATCCAACAGTTTACAGGTTTGTAAGGAGCTTGTGTCTCGT
TTGTAAAGTTTTTTTCCCATTTTTGTAAATGTATAACCTATATTGAAATT
CGTAAAACAAAAAGACCTAAAATTGGTGACTCAAGTTTTGCAATAACTCG
TTGTTTAGTTTGTTTACAATCACATTTTAAATTGCTTTGCACATGAGCCG
ATCGTTCTAATGGCGATTCCATAGATACCATCACAATTGGACTGTCACTA
TTTCATATTGCCTATTCTTGCCAATTTAAGCAGATTTAAGCAAAAAAACT
CTAACAGCAAAATTACCTCCTTCAAAATATTTCACTCGTTTTGCCTCACG
AGTACTAAGTTTCTCTTCACAAAGCTTTATTACAATATATCGCTTGTTAA
TTTTCATGTAGTTCGATTAGTTCTTGTATTTTTCTCATCTTACAGTCGGA
CAAGACGAGCATAACACGTGAATGTGTGATGGGCACGTTGAATTACATGC
CCCCTGAAGCATTGTCGCCTGATGCATCTCATGAAAATGGAGCCTCAAGG
GTAATCATTCGCTTTTTTTACGAGATACTGCTACATCATTAGAATGTTTA
CTCAAAGATCTGCGCCCTTGCTCATCTCTGGTCTAGAGAAAATGGAGATT
AAAATAGTCTTTAGAATTTTTTCCTTAATTGTCTCAATTTAACATTCATT
AGAAAGGAATGGATCAAGCTTAATGCCCAGTTTCCCAACATTTCCTTCCC
TAGACGAAAATCCCGCTTGTTGAAATTTCTAGCAAGGATTCTCGCAAAAG
TAATAAACCTTGAAAGAAGAAATAAAGTCTCAGTCAACTTTAATTCCGAA
CCTTATCTGATTACAGTATTGAATATTTTTAAATCTTTAGATTTCGCGGG
CATCGGATGTGTGGAGTCTTGGTTGTATGTTGTATTTGATGATTTTCAGA
CGAACACCTTACCAACACTTGACCAATCGTGTTAAGATTCATCAAGCCAT
TCGTGTCGGTCAAAATATCAACTATGAAGGAATCGAGGATCCGGTATTGT
TGGACTGTCTGCAGGTAAGTTATTAGTTAGAAAGCCGGGGGTTATTCAGA
TAAAAGATTTCGAAAATTGTATCTAACTTAGATGGTTTGGCTTTTCGATT
TTTTTTTTGCTGGAAAATTTATTGATNAACTTATGATGGTTTGGCTTTTC
GATTTTTTTTTTGCTGGAAAATTTATTGAGTTCGGACAGAGCTCTTTTTT
CGAACTCGAACAGCATTGTCGACCGGCAAGGTCCGTACCCTTATATATCA
GTTTTTTTCTAAGAGTCCGTTTGAAAGCAGGAAAGGACCGGGCGCCGAAG
ATTAATCCTACGCTGCTTCATTGAAAACTTGCCCAAGCATTTCGAGCTCG
GCAAAAACCGGTTTTGAAGTCCCAAGAGTGCAATGAAAAATTGAATGAAA
GCCCATGTACTACTTGTAAAGATTGAAGCAATAAAGGACATTTCATATTC
GGAAAGAAAGAGCGTTGATTTTCTTCAAATTGTCTAATATCCTATCTGTT
TTTTCCCCAGGGTTGCTTAAATTTCAACAAGCGACAGCGATACACGATCG
AACAACTCTTGCAACACCCGTTCCTCAAGTAAGAAATACCTTTTATCGTT
GCAGTTTCATTTTAAAAGAAAACACATAACAAACGGAATTTTTAGATCAG
ATTAAAGTTACTTTATTTTAATACATACATTTTTGTTGGCAACATAACTT
TTAGTTTTAATTTTAAGTATTTTGGTAAAAAAAGTATATAATCAATTGAC
ATCAATACCCAGTGCGCTAGTAAGCTTGATGGAGCGTCTTTATACTTCTA
GTTTTGTTTAAAGGCCTCGAATTCAATTAAAATTAAGGGCCAAGTTTTCA
ATGACCAATTTTTCTACTCTCGTCTAGTGTTTTGACTCTTTGCACTTAAT
GATTAGATCTCCCTTTCAACTTGCTAGGAATTATTGACAACCTCGTTAGA
TACAGCGTTATGTTTTATTTTAACCAAATTGGCTTGTATACATCATCATG
AAATTTTACTCCATTTTTCTTTCCCGTAGAATTTTCTTCTTTTTTTTGTA
TTCATGTTTTTATAGACAAAATGTAGTTATAATTGTAAATTTACAAGTAA
ATTGATTTTGATTTCGACAAAAAATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037094XLOC_037094Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058893-exon-scaffold_314-1575043694:471324..471346TCONS_00058893-exon-scaffold_314-1575043694:471324..471346Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1575043694:468865..469181TCONS_00058893-exon-scaffold_314-1575043694:468865..469181Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1575043694:463168..464813TCONS_00058893-exon-scaffold_314-1575043694:463168..464813Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1575043694:462318..462472TCONS_00058893-exon-scaffold_314-1575043694:462318..462472Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1575043694:461471..461717TCONS_00058893-exon-scaffold_314-1575043694:461471..461717Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1575043694:460947..461051TCONS_00058893-exon-scaffold_314-1575043694:460947..461051Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1575043694:460433..460606TCONS_00058893-exon-scaffold_314-1575043694:460433..460606Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1575043694:459320..459936TCONS_00058893-exon-scaffold_314-1575043694:459320..459936Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:471324..471346TCONS_00058893-exon-scaffold_314-1510915933:471324..471346Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:468865..469181TCONS_00058893-exon-scaffold_314-1510915933:468865..469181Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:463168..464813TCONS_00058893-exon-scaffold_314-1510915933:463168..464813Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:462318..462472TCONS_00058893-exon-scaffold_314-1510915933:462318..462472Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:461471..461717TCONS_00058893-exon-scaffold_314-1510915933:461471..461717Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:460947..461051TCONS_00058893-exon-scaffold_314-1510915933:460947..461051Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:460433..460606TCONS_00058893-exon-scaffold_314-1510915933:460433..460606Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1510915933:459320..459936TCONS_00058893-exon-scaffold_314-1510915933:459320..459936Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:471324..471346TCONS_00058893-exon-scaffold_314-1491911889:471324..471346Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:468865..469181TCONS_00058893-exon-scaffold_314-1491911889:468865..469181Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:463168..464813TCONS_00058893-exon-scaffold_314-1491911889:463168..464813Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:462318..462472TCONS_00058893-exon-scaffold_314-1491911889:462318..462472Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:461471..461717TCONS_00058893-exon-scaffold_314-1491911889:461471..461717Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:460947..461051TCONS_00058893-exon-scaffold_314-1491911889:460947..461051Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:460433..460606TCONS_00058893-exon-scaffold_314-1491911889:460433..460606Clytia hemisphaericaexon
TCONS_00058893-exon-scaffold_314-1491911889:459320..459936TCONS_00058893-exon-scaffold_314-1491911889:459320..459936Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_314supercontigscaffold_314:459320..471346 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.21463	5.27112	1.17901	0.573929	24.843	16.1189	7.41747	7.97272	2.01153	1.65278	1.07656	0.962841	0.702486	1.16237	1.45515	0.962964	1.30981	0.988896	0.875491	0.700538	0.218652	0.545209	5.01484	4.40864	14.8088	10.4164	1.61121	1.0215	3.66256	4.81151
Blast
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BLAST of TCONS_00058893 vs. Swiss-Prot (Human)
Match: TTK (Dual specificity protein kinase TTK OS=Homo sapiens GN=TTK PE=1 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.819e-62
Identity = 124/281 (44.13%), Postives = 183/281 (65.12%), Query Frame = 1 
Query: 1909 SDSRFIKINGRPYTRVKKIARGGFCKVYEVANGEGVLFALKKVNLDELDSFMIDCHLNEIELLTKLRGNP-FIITLYDWEKTDESLLLLMEEGDQDLAKTLRKYTGKVPMDKVQQYWEQMLQAVKIVHDQGIVHADLKPANFLFVGTALKLIDFGISNSLQSDKTSITRECVMGTLNYMPPEALSP-DASHENG--ASRISRASDVWSLGCMLYLMIFRRTPYQHLTNRV-KIHQAIRVGQNINYEGIEDPVLLDCLQGCLNFNKRQRYTIEQLLQHPFLK 2736
            S +  I + GR Y+ +K+I  GG  KV++V N +  ++A+K VNL+E D+  +D + NEI  L KL+ +   II LYD+E TD+ + ++ME G+ DL   L+K     P ++ + YW+ ML+AV  +H  GIVH+DLKPANFL V   LKLIDFGI+N +Q D TS+ ++  +GT+NYMPPEA+    +S ENG   S+IS  SDVWSLGC+LY M + +TP+Q + N++ K+H  I     I +  I +  L D L+ CL  + +QR +I +LL HP+++
Sbjct:  513 SANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER-KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 792
The following BLAST results are available for this feature:
BLAST of TCONS_00058893 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTK1.819e-6244.13Dual specificity protein kinase TTK OS=Homo sapien... [more]
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