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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058951 ID=TCONS_00058951|Name=TCONS_00058951|organism=Clytia hemisphaerica|type=transcript|length=388bp
AATTTATGTACTTGACGATTAACAATCTATCTACCAACGAACAAACGATA
TAAACTACATGTGTGGCAGACTAATCATTGGTGAAGATCATCACTTAGAA
AACGTAAcacttttcttcatttttaaatggATGGTACAGTGAAGAGAAAG
GCAAATACCTTCACAATTTGGATAACAAAGAGAAAATTTCTTTGTGGTGT
ACAGGATCAAAAACTTCAACTTGTGCTTTTGCATGACGCTGAAGAATTGC
GCGGAAAAGCGGATAGATCTCTGCTAATCCCTAAAAGTAGACTAGaccct
agacgatgctatcgcccgtttaaagattTTGTTAGAGTTCCAACGGTTAG
CTGGCTTTAAATTGATCGATAGGCTGGAGGAATCTCTG Run BLAST on NCBI transcript from alignment at scaffold_315:120797..121754+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058951 ID=TCONS_00058951|Name=TCONS_00058951|organism=Clytia hemisphaerica|type=transcript|length=958bp|location=Sequence derived from alignment at scaffold_315:120797..121754+ (Clytia hemisphaerica)
AATTTATGTACTTGACGATTAACAATCTATCTACCAACGAACAAACGATA
TAAACTACATGTGTGGCAGACTAATCATTGGTGAAGATCATCACTTAGAA
AACGTAAcacttttcttcatttttaaatggATGGTACAGTGAAGAGAAAG
GCAAATACCTTCACAATTTGGATAACAAAGAGAAAATTTCTTTGTGGTGT
ACAGGATCAAAAACTTCAACTTGTGCTTTTGCATGACGCTGAAGAATTGC
GCGGAAAAGCGGATAGATCTCTGCTAATCCCTAAAAGTAGACTAGaccct
agacgatgctatcgcccgtttaaaggtcagtaaacgcgggaaagagttag
ggcgtcagggcggtttacgggaaaaaagtggcagTAGAGTTTTGtaacac
tgtaaacatctccgccactgcttactccacccgaatttatcacgcctctc
ctaaactattcctttttttagtgatcttgtgatCGTCTAACTAGACCCTC
TTTGTTAACCAAGGATTTTATTGAAGGTAGACAAACGGCACATATCTAGA
GAAATTTGATTGCACTGCAGCATAGTCGTCTCTGATTTTTTGTTTACCAT
TTCATTTCACGCGTTGGTTTTCAGTACGAAAGGACAACAAGAAGAAATCT
TGAAGTAGAGGTGCGTGTATGATTTTTATTAAATGTTACTGACTCAAGTA
ATGATGGAAAAATGGTTTGAATCATTATATTTCATTACCTGAATTATAAC
TGTATTTTTGACTCGATTTTGAGACAGATTTTATCCACTTCTCAAACTTA
GTGAATAACAGTTAAATTCCATTGTCTGCGAAATCGAGCTGAAATATTAT
GTTGGGTACACATTTTACTAAtgcgtttatttattttcatttcagattTT
GTTAGAGTTCCAACGGTTAGCTGGCTTTAAATTGATCGATAGGCTGGAGG
AATCTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058951-exon-scaffold_315-1491911889:120797..121121 | TCONS_00058951-exon-scaffold_315-1491911889:120797..121121 | Clytia hemisphaerica | exon |
| TCONS_00058951-exon-scaffold_315-1510915933:120797..121121 | TCONS_00058951-exon-scaffold_315-1510915933:120797..121121 | Clytia hemisphaerica | exon |
| TCONS_00058951-exon-scaffold_315-1575043694:120797..121121 | TCONS_00058951-exon-scaffold_315-1575043694:120797..121121 | Clytia hemisphaerica | exon |
| TCONS_00058951-exon-scaffold_315-1491911889:121692..121754 | TCONS_00058951-exon-scaffold_315-1491911889:121692..121754 | Clytia hemisphaerica | exon |
| TCONS_00058951-exon-scaffold_315-1510915933:121692..121754 | TCONS_00058951-exon-scaffold_315-1510915933:121692..121754 | Clytia hemisphaerica | exon |
| TCONS_00058951-exon-scaffold_315-1575043694:121692..121754 | TCONS_00058951-exon-scaffold_315-1575043694:121692..121754 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_315 | supercontig | scaffold_315:120797..121754 + |
Blast
The following BLAST results are available for this feature:
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