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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058967 ID=TCONS_00058967|Name=TCONS_00058967|organism=Clytia hemisphaerica|type=transcript|length=178bp
CCTNTTGCAGAAAAGACGGAGCAAGGTGTATATCAACAGCAGGATGCAAA
TGAGTGTTGGACACAAATGGTTCGAATGCTTCAACAAAAGTTACCTGGAA
AATCAAATAACGACACAGCATCTTCTTCTGGATCACTCATCGATCAATAC
TTTGgCGTTGAATACAAAACAAGGTTTG Run BLAST on NCBI transcript from alignment at scaffold_315:334632..335681+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058967 ID=TCONS_00058967|Name=TCONS_00058967|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at scaffold_315:334632..335681+ (Clytia hemisphaerica)
CCTNTTGCAGAAAAGACGGAGCAAGGTGTATATCAACAGCAGGTAAGTAT
ACTTTAATCAGATTAAGTTTCGCAATATTAAATTTCGTgaataagcctga
aaacagctgaaaaaatagcaattttttgccaCAAATGGAAACTTTGGACT
GGTTTCTCTGTCAAAAAtgcaatttgaaaaattttgtagTGGATTTAATT
GTGTGAGTTGGGAATCTCATGtgttttcgcgagttttaatttcgtgaaaa
tggcaaaaactcgcgaaatcacgaaatttaatctcacGAAAGTTAATTCG
ATTAAAgtagtttctttttttttggagCTTGAAATTCTTAAGTAATGACC
TCTAACAAGTTCCATATTATTGTTAACATAAATTTGGATAAATAAGAATT
AATAAGTTAacaatttttatgttttactttattttctGTGAAATCAAGGA
TGCAAATGAGTGTTGGACACAAATGGTTCGAATGCTTCAACAAAAGTTAC
CTGGAAAATCAAATAACGACACAGCATCTTCTTCTGGATCACTCATCGAT
CAATACTTTGGTTTGCtcacttttcattttcataaatttagaTGAAATTT
ATAGATCCCAAAAATTTATAGATCCTCATTGAAATCATCTATTTctatga
aaacatgaaaatggAAGTTCTATCTTAGTTACCgagcactttttgtgttg
atttGTCCACCAAACAAATAATGATATAGATCCTCATTAATAATACAGAC
ACGTTCCGCACCTGTTGGTGAACTAGCTTAAATTAATCAAGTTCATCAGG
TTTATTTATCTACGCTATTTTGAACAATGAATGCAGCAACCTAAACATGA
TAAtaatatgataatttttttagtaatttgaatacaatgtatagcaatgt
gccctcccggttattaccataatggctttatggcaactcctgaacttggg
cacaggatggcACGGTTTACAATTTACAGTTTTTAACTTGAATACATATT
gatcttcttttattttgattttgtaggCGTTGAATACAAAACAAGGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058967-exon-scaffold_315-1491911889:334632..334673 | TCONS_00058967-exon-scaffold_315-1491911889:334632..334673 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1510915933:334632..334673 | TCONS_00058967-exon-scaffold_315-1510915933:334632..334673 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1575043694:334632..334673 | TCONS_00058967-exon-scaffold_315-1575043694:334632..334673 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1491911889:335080..335191 | TCONS_00058967-exon-scaffold_315-1491911889:335080..335191 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1510915933:335080..335191 | TCONS_00058967-exon-scaffold_315-1510915933:335080..335191 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1575043694:335080..335191 | TCONS_00058967-exon-scaffold_315-1575043694:335080..335191 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1491911889:335658..335681 | TCONS_00058967-exon-scaffold_315-1491911889:335658..335681 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1510915933:335658..335681 | TCONS_00058967-exon-scaffold_315-1510915933:335658..335681 | Clytia hemisphaerica | exon |
| TCONS_00058967-exon-scaffold_315-1575043694:335658..335681 | TCONS_00058967-exon-scaffold_315-1575043694:335658..335681 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_315 | supercontig | scaffold_315:334632..335681 + |
Blast
The following BLAST results are available for this feature:
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