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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059063 ID=TCONS_00059063|Name=TCONS_00059063|organism=Clytia hemisphaerica|type=transcript|length=500bp
ctaatttgaaatgtacTTTAGTATTAttactgaaattcaaaatgaaaaat
aaaccaCATACCATCAAAAGAACTGGGTCTTCCTGGGTCCTCACTGACAC
TTCTCAACAGATGGATGTGTGTCTCTTCTTGCAACGAATGTTTCTTTGTC
ATCCCAGTGAAACTCTTGGAGATTTCTGGGGAATAATTCAACGAATTGTT
AGCCATGatACCACTAGCTCCACTTCCACCTCCAGGACCGGCTCCACTAT
TACTTCCACTAAGAACACCCATATGAGAATGATGGGTGGCACTTGATGAA
CGCCCTGAGAGAAGGGCAGCTGATGACGCTTTCGGTTTGGTGTAATCGAA
AACACGAGCGTCGAATTCGTCGTAATCTTGGATGTCTCCGTACAGTGGGG
AACAGCATTGTAAATCTGGAgagtgaaaacatttttttttgataaactta
TTTCATTAGTGTGCAAAGAGCTGAAGTACAATTTTCGGTCTTTATATGTT Run BLAST on NCBI transcript from alignment at scaffold_316:260140..263129+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059063 ID=TCONS_00059063|Name=TCONS_00059063|organism=Clytia hemisphaerica|type=transcript|length=2990bp|location=Sequence derived from alignment at scaffold_316:260140..263129+ (Clytia hemisphaerica)
ctaatttgaaatgtacTTTAGTATTAttactgaaattcaaaatgaaaaat
aaaccaCATACCATCAAAAGAACTGGGTCTTCCTGGGTCCTCACTGACAC
TTCTCAACAGATGGATGTGTGTCTCTTCTTGCAACGAATGTTTCTTTGTC
ATCCCAGTGAAACTCTTGGAGATTTCTGGGGAATAATTCAACGAATTGTT
AGCCATGATACCtgcagaaaatgaaaaacacacgtttttttataagaaca
tccaaaactttggaagccttgggatgttccaaaatttttgagttttaagc
ctagaaatgtacttaacatgttcttattttcgccatatTTTAAGTATTTC
TGTCcattttcttaataaatttgGTGTTTCGAAAAGCCTTAATTAAAATG
TTCGTTCTTAACACTTTGACTAtctaagccttatgttcttttatatactt
tgttcttataaaaaaacttgcatAAGACGCATTGTGttcttaaaactttt
gaaaccgAAGAGCAAAATAAGTTTTGGACAATTTATGGACCTTGTGAGGT
CATTATACACACAACTTATGGACTTTGTGGGGACAATATACAAACAATTT
ATGGACCTTGTGGAGACGTTTTACACACAATTTATGGACCTTGTGGGGAC
ATTATACACACTTAATTTATGGACCTTGTGGGGACATTATAAACACAGTT
TATGGACCTTGTGAGgacattatacacacaatttatAGACCTTGGTGGGG
ACATTACACACACAATTTATGGACCTTGTGGGgacattatacacacaatt
tatggactttgtggggacattatacacacaatttatagatcttgtgggga
cattatacacacaatttatGGACCTTGTGGGGACATTAAACACACAAATT
ATGGACCTTGTGGGgacattatacacacaatttatagaccttgtggggac
attatacacacaatttatggaccttgtggggacattatacacacaattta
tGGACCTTGTGGGGACACTATACACACAATTTATGGACCTTGTGGGgaca
ttatacacacaatttatggaccttgtggggacattatacacacaatttat
ggaccttgtggggacattatacacacaatttatagatcttgtggggacat
tatacacacaatttatggactttgtggggacattatacacacaatttatG
GACCTTGTGGGGACATTATAAACACAGTTTATGGACCTTGTGAGgacatt
atacacacaatttatAGACCTTGGTGGGgacattatacacacaatttatg
gaccttgtggggacattatacacacaattCATAGACCTTGTGGGgacatt
atacacacaatttatggaccttgtggggacattatacacacaatttatgg
accttgtgaggacattatacacacaatttatggaccttgtggggacatta
tacacacaatttatGGACCTTGTGGGACATTATAAACACAGTTTATGGAC
CTTGTGAGgacattatacacacaatttatGGACCTTGTGGGGACATTATA
AACACAGTTTATGGACGTTGTGGGgacattatacacacaatttatggacc
ttgtggggacattatacacacaatttatggaccttgtggggacattatac
acacaatttattgaccttgtggggacattatacacacaatttatggacct
tgtggggacattatacacacaatttatggaccttgtggggacattatacc
cacaatttatggaccttgtggggacattatacacacaatttatggacctt
gtggggacattatacacacaatttatGGACCTTGTGGGAATattatacac
acaatttatggactttgtggggacattatacatacaatttatggaccttg
tggggacattatacacacaatttatggaccttgtggggacattatacaca
caatttatggaccttgtggggacattatacacacaatttatggaccttgt
ggggatattatacacacaatttatggaccttgtggagacattatacacac
aatttatggaccttgtgaggacattatacacacaatttatggactttgtg
gggacattatacacacaatttatggactttgtggggacattatacacaca
atttatggatcttgtggggacattatacacacaatttatggaccttgtga
ggacattatacacacaatttatggactttgtggggacattatacacacaa
tttatggatcttgtggggacattatacacacaatttatggaccttgtgag
gacattatacacacaatttatgcaccttgtggggacattatacacacaat
ttatGGACTTTGTGGAgacattatacacacaatttaCGGAATTTCTTCTA
TTTTGAAGACGTTGTGGGGACATTTAGCAGACAATTTTAAAGTATCATGA
GTAATATTACACATATTTTGAAATCGTTTTGGGGACATTTTTTCCGACAA
TTTGAGGGTATTGTGAGTACAATTCTTACACATACCTTAAAGACGTTTAG
GGACATTTTATTACAGACAATTTGAGGACAGCGTGGGAGGACATTTTTGG
AACATTTCATGGTGAATATAGATAACATGTGGACTTTCGACGTAAGTTTG
ATTAGACATGAAAAAATGTTCTCGAactgtcaaaattaaaaaagaacatA
CCACTAGCTCCACTTCCACCTCCAGGACCGGCTCCACTATTACTTCCACT
AAGAACACCCATATGAGAATGATGGGTGGCACTTGATGAACGCCCTGAGA
GAAGGGCAGCTGATGACGCTTTCGGTTTGGTGTAATCGAAAACACGAGCG
TCGAATTCGTCGTAATCTTGGATGTCTCCGTACAGTGGGGAACAGCATTG
TAAATCTGGAgagtgaaaacatttttttttgataaacttaTTTCATTAGT
GTGCAAAGAGCTGAAGTACAATTTTCGGTCTTTATATGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059063-exon-scaffold_316-1491911889:260140..260346 | TCONS_00059063-exon-scaffold_316-1491911889:260140..260346 | Clytia hemisphaerica | exon |
| TCONS_00059063-exon-scaffold_316-1510915933:260140..260346 | TCONS_00059063-exon-scaffold_316-1510915933:260140..260346 | Clytia hemisphaerica | exon |
| TCONS_00059063-exon-scaffold_316-1575043694:260140..260346 | TCONS_00059063-exon-scaffold_316-1575043694:260140..260346 | Clytia hemisphaerica | exon |
| TCONS_00059063-exon-scaffold_316-1491911889:262837..263129 | TCONS_00059063-exon-scaffold_316-1491911889:262837..263129 | Clytia hemisphaerica | exon |
| TCONS_00059063-exon-scaffold_316-1510915933:262837..263129 | TCONS_00059063-exon-scaffold_316-1510915933:262837..263129 | Clytia hemisphaerica | exon |
| TCONS_00059063-exon-scaffold_316-1575043694:262837..263129 | TCONS_00059063-exon-scaffold_316-1575043694:262837..263129 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_316 | supercontig | scaffold_316:260140..263129 + |
Blast
The following BLAST results are available for this feature:
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