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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059147 ID=TCONS_00059147|Name=TCONS_00059147|organism=Clytia hemisphaerica|type=transcript|length=657bp
CTAAAGATTGAAATCGTGAACAAGATAGTGACTGAAGAGAAACAAATGAA
GAGGCGTTACCAACAACAACCTCAATTATGGCCTGAAAATCGACCAAGGA
GAATGCCACGTAAGCGATCGAAGCCACGTTTCGCACCATCCAGTGGTTCA
GAATCAATGGAATACGGTGGTGATGTCGAAGACGTCGGGGTATAACAACA
TTTTTAGATTCCAAGTTTAAAAAGGGATACAGAAGatttagcctagaaat
ctaacctagtttgattcagtcaccaggataaatctgatggtaagttgtga
ctgaataaccaACTTAGTAGatagtattccaaggcaaacttaaaatccgt
aaatataaaaaatctttaaagcgccgaaaacgctataCTGCCAAAatccg
tgtgtcctagccttgtgaatacgggctgaGTTAACTAGGctacagtagac
tctcgcttattcgaacttctattattggAATCTTTATGTAATCCGAACTT
ATTCCCATTCCCTGTCAAAGAGCCCTCTCAATATATTTTCTATAGATCGG
ATGTCTCGGGCAAATAAGATTCAAGTTCGAATTAGTCGATTATATTTCTT
TAAATCATTCACTGACTGATTTCTTTAGAATATAGTCTATTTTTCGATTC
CTCTAGC Run BLAST on NCBI transcript from alignment at scaffold_318:124767..126246- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059147 ID=TCONS_00059147|Name=TCONS_00059147|organism=Clytia hemisphaerica|type=transcript|length=1480bp|location=Sequence derived from alignment at scaffold_318:124767..126246- (Clytia hemisphaerica)
CTAAAGATTGAAATCGTGAACAAGATAGTGACTGAAGAGAAACAAATGAA
GAGGCGTTACCAACAACAACCTCAATTATGGCCTGAAAATCGACCAAGGG
TAAGTTGAGGAATTGTTAAAGGTTTTGTTTTTAAATAAGAGTGATATAGT
TTTGCTTACTCATCAATTTTAATTCATAAGCTTTTTCACATTGGTATGAT
GTGGAGCAAGATTGGCTAGAAAGAGGAAAAGAAAAACATTTTTTTGCTTG
TATCAGCAATACGATGATAATATATAATATAACATAACAATAGGCAGACA
CTGTCCTGATATAAAATATATGTCTGATATGAAATGGGAACACTTACATA
AAAATAAAACCTTTAATTTGTGTGTTTTATGTTCGCCTCCCCCACCCCCG
CCTTCGAGGACTGAGGCAATTTTAACCGCAACAAAACGGTAAATAGGCTC
TAATTTATCGTCATCCTTAGTCATACATAAACGTACCAAACAGGGATGAG
CTGGAGTTTTTACAAGATACTTCACTAATTGGTCATTTGAAGTGATAGAG
ATGACGCGTTTTTTAGAAAAAGTAACAAAATTGTTTTATCACTGGTTAAC
GACCAACCAAATCAAATAAGAGCGTGTAAAAACTCCACCTTGTCCCACCA
AACATACCATCTCATACGAAAAAAAACACATAAAACGGTTATTCTCGATG
AGTTGTGGTAGGGCTTTCTAAGAAGAAGTCAAAAGAACGAGATTTATGGC
AAAAAGTGTTGAAGGTTTGGTTTCTTAATAAATTGCGCATGCGCAAAAAA
AAAAATCTTGATATCGTGCTTCAAAGAACTGTTTGAAAATTTTGGAAAGT
AAGACCATTTGATGAAGAAAGTGTCTGGCCTCTAGTCTCGTTTCTTATGA
CAAATTAATCATTTCTTTACAGAGAATGCCACGTAAGCGATCGAAGCCAC
GTTTCGCACCATCCAGTGGTTCAGAATCAATGGAATACGGTGGTGATGTC
GAAGACGTCGGGGTATAACAACATTTTTAGATTCCAAGTTTAAAAAGGGA
TACAGAAGATTTAGCCTAGAAATCTAACCTAGTTTGATTCAGTCACCAGG
ATAAATCTGATGGTAAGTTGTGACTGAATAACCAACTTAGTAGATAGTAT
TCCAAGGCAAACTTAAAATCCGTAAATATAAAAAATCTTTAAAGCGCCGA
AAACGCTATACTGCCAAAATCCGTGTGTCCTAGCCTTGTGAATACGGGCT
GAGTTAACTAGGCTACAGTAGACTCTCGCTTATTCGAACTTCTATTATTG
GAATCTTTATGTAATCCGAACTTATTCCCATTCCCTGTCAAAGAGCCCTC
TCAATATATTTTCTATAGATCGGATGTCTCGGGCAAATAAGATTCAAGTT
CGAATTAGTCGATTATATTTCTTTAAATCATTCACTGACTGATTTCTTTA
GAATATAGTCTATTTTTCGATTCCTCTAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059147-exon-scaffold_318-1575043694:126148..126246 | TCONS_00059147-exon-scaffold_318-1575043694:126148..126246 | Clytia hemisphaerica | exon |
| TCONS_00059147-exon-scaffold_318-1575043694:124767..125324 | TCONS_00059147-exon-scaffold_318-1575043694:124767..125324 | Clytia hemisphaerica | exon |
| TCONS_00059147-exon-scaffold_318-1510915933:126148..126246 | TCONS_00059147-exon-scaffold_318-1510915933:126148..126246 | Clytia hemisphaerica | exon |
| TCONS_00059147-exon-scaffold_318-1510915933:124767..125324 | TCONS_00059147-exon-scaffold_318-1510915933:124767..125324 | Clytia hemisphaerica | exon |
| TCONS_00059147-exon-scaffold_318-1491911889:126148..126246 | TCONS_00059147-exon-scaffold_318-1491911889:126148..126246 | Clytia hemisphaerica | exon |
| TCONS_00059147-exon-scaffold_318-1491911889:124767..125324 | TCONS_00059147-exon-scaffold_318-1491911889:124767..125324 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_318 | supercontig | scaffold_318:124767..126246 - |
Blast
The following BLAST results are available for this feature:
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