TCONS_00059149 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059149
Unique NameTCONS_00059149
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059149 ID=TCONS_00059149|Name=TCONS_00059149|organism=Clytia hemisphaerica|type=transcript|length=1120bp
TGGGCTTCTCTGCCACTGGGGAATTTCGTTTGGACTAGATTTAAAAGTAT
AAAGTATTCAAAAAAATCATGTCAACTATAATCTATAAGCAAGATATTGA
TGATAATCGTCCAATGACGGGTGATGAAACAGACACTGAAGATGCTCATT
TCAAATATGTCACATCACCGACTCTAGCAAATGATGCAGCTGCATTATCA
GATAGTAGTCTTCAACGTGAAAGTAGTATTGACATTGCAGAAGAAATGAA
TGGTATGCAAAGTGGGGGGACTGCTGGTGGTTATAATGACAAAGAAATGT
TGACAGAAAGCTTCAtgaCGCCAAGATTGATGGAGGATGAATCAGAAAGC
TTATCTTCAGATTTCAATCTCTACAGTGATGAAGAGACAAGCTCTATTGC
AGGAAGTTTTGATGAGTTCGGTAAAGACGATTTCGAAGATGACAGCGCCA
CTTCCGAACCTCAATCAACTGTTTCAAGAGAgGAAATGATGAGAAGGAAA
GCATTAAAGAAACACTTGGATCAGTTGGGAGATCTTGTTGTTGAGAAAGA
ATTTGCTGTACAACAAGCAAGGGAAGAACTTGCAAAGTGTCAAAATCATT
TAAAAGGACTTGAAGATGAACTAGAAACTGTTGAAAAGGAAATCAGGGAC
GCTGATAATAACAATCAAAAAGCTACATACTTTCGATTGAAGAGTAAGAA
AGAACGCTTAGTTGCAGAGATCAAAGTGGAAAAAGAAGTCGAAGAACGAG
CAATACAAAACGTTGATACAGCCGAgtaattcatttatttattttgttta
aattgACGAGTTTGACTTTTGCAGGTCTGTATAAGCACCTCCTATTTTTT
GGAACAGGGCtagggttgcttagcattctagctcatttccgaaaaatttg
ctttgaccacccctgattATTTTACCATCttcaagggctatcgtttgcca
tgcttagattatctaaaaagcatTTGCTTTTGGCTCATTTCAGGACTcga
gccttagcaacctggttgcttatgAAAAGAAATATGTACCTTTATTAAGA
ATAGAAGGGAAGTTTGAAAATCATTGCACAATAGCTGCTGCATTCACGGC
CAAAATGTGGACTAGCtaat
Run BLAST on NCBI

protein sequence of TCONS_00059149-protein

>TCONS_00059149-protein ID=TCONS_00059149-protein|Name=TCONS_00059149-protein|organism=Clytia hemisphaerica|type=polypeptide|length=236bp
MSTIIYKQDIDDNRPMTGDETDTEDAHFKYVTSPTLANDAAALSDSSLQR
ESSIDIAEEMNGMQSGGTAGGYNDKEMLTESFMTPRLMEDESESLSSDFN
LYSDEETSSIAGSFDEFGKDDFEDDSATSEPQSTVSREEMMRRKALKKHL
DQLGDLVVEKEFAVQQAREELAKCQNHLKGLEDELETVEKEIRDADNNNQ
KATYFRLKSKKERLVAEIKVEKEVEERAIQNVDTAE
Run BLAST on NCBI

transcript from alignment at scaffold_318:148003..158298-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059149 ID=TCONS_00059149|Name=TCONS_00059149|organism=Clytia hemisphaerica|type=transcript|length=10296bp|location=Sequence derived from alignment at scaffold_318:148003..158298- (Clytia hemisphaerica)
TGGGCTTCTCTGCCACTGGGGAATTTCGTTTGGACTAGATTTAAAAGGTA
GGTATACTTGTTCCAATTTTATTACTATATAGTTGCTAAGTTTCAAAAGG
GGGACAATTTATAAAAGGTCGATTTACGTCAATTTGTGCGTAAGGCGGCA
ATCACAAACATCTTGGTTTCGCGTCGCCTGACCTACTCTAGAAAATTTAT
TAGAATTGAGTCGGTGAGTCGGTAAATTTGTTGGACTTTTTCTGTCAATA
CCTTTCCTTCGTTCAAAAATTTTATTATTGCTGATTTTTTTATTTTTTTC
AATTCTAGCACGCGCATTCGCAGCATTTTGACTTTATCGTTACATGCGCC
ATTGGCGATCGGAGGTCACAGTGTTCAAAGCTCATAATCTTAAACCACCC
ATTACACGCGCTTGTTTTGGCTGCTGGCTTGCTGGCAGTTTCCTCCACGA
CCCTCGACATGGCCCGAGAATTCTCGGGCCAAAACTTTTATTGGAATTTG
CGTAAAGCCCGAGTATGGCCCGAGCTGGCCCGAGAATTCAGGCCGTGTTC
GGGTCACACGCGGGGCACGCACGGGCCACACTCGGACCAATTTTAAGAGC
GCCGCTCCTAAAGAGCGCCGCACCTCTGAAGGGGGCACTTTTTAGAAAAA
AGATTAAGAAAACTGAATTCTATAGTTTTCTTGTTAATAAACTCCACATC
TAATTCTAAAATAAGAATGTTCTTTAGTGGAAGATAATGTCTAAAAATCA
AAAGGACAGTTGTCAATATCATGGCATGGGTTGTTTCTTGATTTCTTGAG
TCTTTAAAAGGTAGCAAATAAAAAACTTGAAAAGAGCGCCGCCCTCTAAA
GAGCACCGCACCTAAAATTACAAAAATTTTAAGAGCGCCGCAGCGCTTAG
TTGAGGAAATACGGTACCTAACTTAGGAGTTTACTAGGCTGCTGGCACCC
ATTACAGTAACGGATTCAATTTGAACGATTTGATAACGATTAGAATCTAG
ATCAAATTTTCGAATGAGAATTCGTCACTGTAATGTCTCAATTTTTCTCA
ATCGAATGCGAGAAGACAGGATACCGTCTATATCGCACCTCGACGTCTTT
TGACCAATTAGATCGCTAGAATCTTACTGACACGCTGTCTTAATTTTTCA
TCTTTAATCTGCTCTTCCGCAATCGATTGAACTCATCGTTAATCTATAAG
AGAAAGATTTATAGGATTCAGTACTTCGCCCCTACTCCGTATATACTTAG
ATTAGACTCAATGGACCCAGCCAGACAGGCTTAAAAGCGAAAAAGGAGGC
CCGAACATGGCCCGAATGACTCGGGTCATGTTCGGGCCAAAAGAATTGAT
AGGGTCTCTCGGCCCGAACATGGCCCAAAGAGGCCCAAGAATTCTCGGGT
GCCGATTGACCGACTCACTTTTTAGACCCAACAAGGACGCGAAATGAAGA
TATTTGTGATTGCCGCCTAACCGTGACGCGTGAGATCAAAAAACAAAGAC
AAAACAAAAATAACAGAAGGCCAAAATAGAAAAACCTAGACACAATAAAA
GGGAAAAGTATACACCAGTAGCGGCCTGGCTTAATTTGCTTGGTGGTGCA
AACTATGAAATTGGCGCCCCTGGTATTTTTGTCCTTATTTGCGCCCTCCG
TCATTAAGTGAAAATACTAAACTGTAAGAGCAGTGACTGGTTGAAAGTAA
CGCCCCTAATCTTTGAAATGGAAATTTTATACCTGGTAAGTCGATTATCC
GTCTATATATTTTTGCTTTCTAAAAGTCTCTACTCTCTATTAAAGATCAA
TGGCTGAAATAGGGAAAAAATCAGAAGTTGGGAGGAAGGGTTCCTTGTAA
TTCTGGCGCCGAAGGCAAAAAAATTTGGTGTAAGAAAGGTCAAACAGCTT
AAAAGATCTTCTAAAACGGAGAAAGTTAGTCAGTATAAGACCACAAAAAC
CACAGCGAGAATCAACAAGTTTTGATCATTTTGGCAATCTCTCATTTTGG
GGATGAGCATTCTCTTTAACCCCTGGTGGATACACAACACCTCTCTTACT
TCTGATTCAATATTAATAAAAGTTTTGAAAAAATTCAAAAGAAAGGATGC
AAGAAGGTAAAATAAAGCGCCGCAGGCGAAAAAAATTAACATTGTACTCA
TAGTAGCGGCGCTATAAACGTGCCGAAGGGCGCCAAATTGCCCAATTAAA
CATCAACAAAATTTTGGCGCCCCCTTTAAAAGCTCTTTTGGCGCCCCTCT
CAGATCTTTCTGGGTGGTGCACTGCACACCCTGCACCCCCTGCCAGGCCG
CCACTGGTATACACCCGCCTGCAGGGAAATGGAGGAACTAAATATTAGAA
AAAAAGATGGGATTTTATGAAACTGTATGAAAGACAAAACATTCAATCAA
CAAAAAATCAAATTTGGCAAAACAAAAATTTTTTTTAGGGACATTCCCAT
ACGAAAATAGCCAAAAACTGCAAAAAAGTGTAAGAAAATGTAAAAACTAG
AATTAGCCAGTGTGATTTTCAGATTCCTTAAAGTACCCCTGATACCCCTT
TTTATGATAAACATACAAATTTTCAGCCACCAACCATTTGTTCCTCCATT
TCCAGAGAGGTTTGAAGAATGTCACTTTGAAAAGGTTTTTTTCCCACGGA
CGGCAAAAATAAAAAAGTGCCCTGGGTAGATGAATAATTTGCCAAACTAT
CTTCGGGCCAAGTGTTTAGTGTTATATACCCCTGGAAAGCAGAGATTTCG
GATTAACTAGTGCAAAAAACCAAAGGACATACAGTACACACAAAAATAGT
TATATAACTTTGAATTTTGTGGGAAAATGCAACATTTGGTTTGACGTCAA
CGAAAGTTGCGCAACTTCTAGAGTTGCTTAACTTGCATCAGTGGAGGCAA
ATATGCATACCCCTCAAATGAATGACCTGTCTGTAAGTAAGATACAAATT
AAAATCAAAACAAAAGTGGTAGAGTAGACCTGCGAGCAGAGCTGCGTAGT
TCATTTGTTTGAAATTTTGCTGCTTTGATTGGTCACTAGTCATTTGATGG
CTACGCAAGTTTCCCTCCACTGATGCAAGTTACCCCACTTCACAGTACAT
GTCCCGCAGGATGCAGAACATTTGGTAACTATGTATACTACAGTATAAAG
AGCAATCAAATCTCTGTTCCTCTAAAGAATCCTACATTATATTATTAACA
CGAATGCATAATTTCTTGTTTCTTTTAACACCATGCATGTACTCTTGTCT
CCCGAATAGACGGGGGGGGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGGGTAATTTGAAGACATAAATTTTTTTAACTGATGTCAATTTC
AGCAACAAAAAAGAAACTTTAGCAAATGAACACGTAACATAAGAACCAAT
TGTAACAAAAAGGAAAATTTTAACAAGTTTAAGGTCTATCTACACTGTAA
TAAAATATTAAATCATTCGAATTTAGTTAGCGAGGAGGGGTCTTAAAAAG
AGCGGGGGGATGGATTTTTTTTTCTAAACAATTAGCGGGGGGACGTCTAT
TTGGGATACAAGAGTAGTTACTTTTATAGGCGTACAAACTTTTGCAAGAA
AAAACTTTTGCGAATTTTGCAAATTTTATGCTTGCAAAAAATTCTCAAAA
AAATTGGACTCACTAGTTAAAACTTCAAAATCTTAATAAATAAATATCCA
ATTTTCGGCATAGATCCTATAATGTCTTTTCAAAGTCGAAGAGCAATCGT
CTTTATTGGATGATTTGAAAGGAATAATTTTCACTTTTAAAAGGCAATTT
TCATTCAAGAATTTTCATTTATTCAACTTAACAATTTGTGAAAGTTTATG
CTCCGAAAAACATTTTCCCTCAAATTTGCAAAATAAATGTTGTAAATTTT
TTGATTTTACAACACACATTGCTGTGACATTGCTGGCAATGAATTCTGAC
TTGAAAAATGTGGGTCCAGTTCCCTGGAAAGGATCTAATTACGCTTCAAA
ATGAATCATTTTTATAATACACTAAATCAAAAAAATTTATAAAATTAAGA
TGGGGGTTGTTTTTTTTTACAACAAACTGTAAAATCAAACTTCATAACGC
TCAAACATTTTAATATCACTTTCATAAAGAATAAAATGTTATTTAAAAAC
CTTTTAAAATTTATAAGTATATATTTGGTTCTTCAAAGCGATTTCCCTTT
GCTGTAACGGGCTTTAAGTTCATAACAACCCCAGGATTTTCTTGTGCGGC
TAATCTAGAAAGGCCTTTAGTGTGGCATAAACAAACGATTAGATTAAACA
TAGCTTCAGCCCCCTGCTAGTTGGGGGTTATATACGCCCTCCAAAAAAGG
TGGGGGCTAAAGATGTTTCAAATACTTGGAGGACCTAATGTACTTTGGGG
GATCTAAAATCTCATCATTAAACATTAAATCTCATCATTTAACTTTAAAT
AACGTTAAATTCTTTCATGTTCTTCATTACAGGGGAAGAGGAACTGGTAA
TTAGGCACAATTAACAAAGAAGGATGAGTCCTTACCAGGTTTTTATTGAG
AAAAACTTTTAAACAGTACTTTTTCTTGAAAAAAACGACCACTTCTCAAC
TTTAGAATTTTTCAACTTTTGGTTACTTTGTAAACTTTTCAAAACCAAGC
TTTGAATTTGCTCTAAAATTTGTTTAATTTGTTTATCCTCCAAATGTTTT
TTATGGTCCTTCTAACCTCGGGAAAATCATTTGAAGACTTTTGCATTCAC
ATTGAAGCTTCCCCTTTGCTTACAAAGCTACCGCCAGTAAAACGTCAAAA
AAGAAAAGTCTAGCTTCTCTACCAAAAAACCCTGGTGGGTTTTCATTGGT
TCTCAAAATAAGGCTCTGGCAATACTTTTAGTCCGCTAATAGACTGTAGA
AGTCTTCAGTATGTATGATACTATGTACCTTGGTACAAACAACAATCTTT
TTATCATAAACAATTACACCCAAGAAACCGGATCAAGGCTTTGAAGATGT
TGAAAGACAAAAAAACCTGTAGCAACTTTTGATGTCAATTTCTGCAGGTT
TTGAAACCTACCTATGGGAGAGTATACCCTTTTAAAACGAGATTAATTGA
ATATTTTGGCCTAAGATTTTTGCTTGTGTAAAGTTTCAAATACACATCAC
AAAGCAACGTCAATTTATAAGCAATCAAGTTCATGGGAAGTTTTTTTGGG
CCACCACCCGGTATAATGGCAATTAAATAGAGGAATCTGACGCACAGGAA
AATTTTGAATCTCTTTTGGGAATTGGATGAGTGATTTTCAATAAAAAAGT
CGATTGAAATACTACAAGAAATTATTAAATGAGGGAAGGAGAGTATATCA
TTACTGAGAGATCAGCAAAAATCAGTTACTTTTATATCCAGTGTATAATA
ATTGAATAAACTGTTGTGATTACATAATGATGAGGTATTCCACATGAGTA
AAGGTTCAATCTAAGTTTAATCAAAATAAGTGTCTTGGAAAATTGGAAAT
CTTGCAATTTTGTTCTGCCTTTGAGACTGGCCTTTTTGTCATATGAAAAC
ATTGTCTATTCCTCTGCATGAAAAAAGGTCAATCTCAATCTCAAAGATGA
CCACCACAGTAAAACTTTAAATTTTGTAAGGGACTAATTTTGAGATTGAA
CCTTATATCATGTGAACAACGATATGGGTATGGCAATATTGGCATTATGC
ACTGGCAGCTGTGCACAAAATGTTGAAAAAGTTTGACCAAATTTGTTTGG
CTAATCTGGAATTGTTGGGAGGCCTGCCTAATTATTAGCAGGCTAAATCT
AGAAAACTGTTCTAAAAAGAAAACAATTTATAAGAAACCTTTATTATTTA
GTATAAAGTATTCAAAAAAATCATGTCAACTATAATCTATAAGCAAGATA
TTGATGATAATCGTCCAATGACGGGTGATGAAACAGACACTGAAGATGCT
CATTTCAAATATGTCACATCACCGACTCTAGCAAATGATGCAGCTGCATT
ATCAGATAGTAGTCTTCAACGTGAAAGTAGTATTGACATTGCAGAAGAAA
TGAATGGTATGCAAAGTGGGGGGACTGCTGGTGGTTATAATGACAAAGAA
ATGTTGACAGAAAGCTTCAGTAAGTTTTCATGTTATATTGAAAGATAAGG
TTTGCGTAAAACAACAATTGTTTGATTGAAATTTGTATCCTATTTTGACT
CACATTATGGAGTAATTGTCCCAGGGACTATATGAAAATTGACTAATAAC
ACTTACAGACAATTTGTCTTTTTAGTAAAATACTGACTGACAGGGCAATA
ATTCATAAAAATAGACAGCCAGAAGGTTGCTCATTTTAATTTTTTGAAAA
TATAATATTAATACTAAATTAATAATATCAGTCTTTACACAGCATCATCA
GATGCAGTCTCATCTAGCTTTAAAATGAGAACTTAACTTGAGGAGTTTTT
CTTGGAGGCTCTTAAAATAAGTTCTTTTTACACAACATTATCCATTTTTA
TTTTTTAGTGACGCCAAGATTGATGGAGGATGAATCAGAAAGCTTATCTT
CAGATTTCAATCTCTACAGTGATGAAGAGACAAGCTCTATTGCAGGGTAA
TTACTTATTTTCATACTTTCTTTTTGGGTACAAACTTTATTGGGCAGGTG
TCACTCAATCAACATTAGAACTATTATAAGAAGGATGCCCTCTTAAGTTT
ATATTGATCCAAAATATAAGAAGATGAAACACTAAAGTCAAAAGGTTAGC
TGAGAGAATCACCAAACAAATCTATGATGTGACTAGACATTGCAGGTTAA
AATGAAATTTTGTTTTTTTGTTTGACACTTTCAACATAAGGCTTGACAAA
GAGCTTTTCAACTTTAGCTCTATTCATTCATAAAAGATGATTCACTGTTT
GTTACTTCATTTTTTAGAAGTTTTGATGAGTTCGGTAAAGACGATTTCGA
AGATGACAGCGCCACTTCCGAACCTCAATCAACTGTTTCAAGAGAGGTAA
AATTATTAAAAAAGAAGAAAAGTTTGGAATGAGATTTTGAGAAATCTATA
ATGCCAAAAAATTAAGAATTAAAAAGCTTCAATTCAATATCATATCTACT
TTTGAACCAATCACGTGCACAGTTGAGTCCCACAAAAGATGAAATGAACA
GGGTTTGCCCCCTATTAGTTATCCAAATTCTTAAAATTATTTGAAAGATT
TTAAGATGCTGACTTCTATTTTAAAATCAGACTGTCCCTTAGTCTGTCTA
TAATTGGCAATGGAAGCAATAATGGCTAAAGTATAACTTTTGTTAGCCAA
ATTCAATGTTAAGAATTTTTTAGCTGTGTTTTAGATAATCATTGTTGAAT
GTAATTTCGGTCGAAAAATCTGCAAAATTATAGTGACTAAATTTGCAATG
GAAAAATTGAGTTTCAGTTGTCCTTTTTCATGTATGTTAAGAACGTTTCA
AAGTAAACCAACGATTTCCTCAGAATATATTATGTATACAGGGTTGCCAC
GTCTGCCGAAAAAGTCTGGAAAAATTTGGCGATTTTAAGCAAAAATATCT
GGAAAAAATTGAGGTTTTTGGGCAAAAGTCTGGAATTTTGAAAGTTTCCT
ACCCGTGACAATACTGTGTATATTACCGTCCCCAAAATACTCCTTTGTAG
TGTGTGTTTGTAATATTCATTTCCTCCACCTTCTATCACTATAATTTTAT
TTATTAATGTCTTACAGGAAATGATGAGAAGGAAAGCATTAAAGAAACAC
TTGGATCAGTTGGGAGATCTTGTTGTTGAGAAAGAATTTGCTGTACAACA
AGCAAGGTACTAAATGTATCCATCTGTCTACTTAACCCATGTAATGTACT
TGTTACATAATGCGAAGAAAATTGCATACCTTTATAAGCTGNTGCTGTAC
AACAAGCAAGGTACTAAATGTATCCATCTGTCTACTTAACCCATCTAATG
TACTTGTTACATAATGTGAAGAAAATTGCATACCTTTATAAGCTGTATCT
TTTGAAAATACTTATTTTCATTTAACATCACATCAACCTTTTATTTTTAC
TCCATAGAAGAGATCTTCGTATTCATTTTTTGTTGAACATAGCAGAAAGT
TTTATTTTTTACTTTTTATCTCTGGCTCTTCAATATTTACCTGAGCTAGG
TAAATTTAGTGCTAGTGGCCTAGAATGGTTTTGGATTGATGAGTACTCAA
TGATCCAAGAAGATTTTACGGCCCATATAGATCAGTGGGGGATTATCATC
TTGCTTAAATCTTTTCTCTCATTGTTTTAGGGAAGAACTTGCAAAGTGTC
AAAATCATTTAAAAGGACTTGAAGATGAACTAGAAACTGTTGAAAAGGAA
ATCAGGGACGCTGATAATAACAATCAAAAGTATGATAAACATTCTTTTAC
ATTTCACTGTCTCCTAAATCTCTAAGGGCACATAAAATCACATCACATCA
TCATCCGGGAGGAGGGGTACTAGGCTTGCAAGATGACAGGTATGTCTGAA
CCAAAGTTCGAAAATTGTCTCTTAGAGAGACTGATTTTCGAAAATTTTGT
CCATTCTTTGACGATTTTGAGAGACTTTTCCCCCAAATATTTCAGCCAAA
ATCTTTAAATTTTAAGCCAAATTTCAAGACCTTTCGAGGGAGTTGATTTT
AGATTTTTGTAATCTTGGAACCCTTACAGAGACTCGTTTGCTTTTTAATG
GTTTTTGTCCCCTTTTGAGGGACTTTCAAGGGTGTGAAAAAGGGTCCCTA
ATGGCTCACACATCCCGGCACCCATTTTGCCTAAGTCCCCCCCCTCCGGC
ATCATATATTATAAAAACCCTGTCTCTGTCAATGGGGTATGAAATTCAGG
GTGTTTTCGGAGCAAGTACAAATTCTTAGCTTGGGGTGCCAGGGGCTAAA
GACGCTGGTGTAGAATGTGCAGATCTATTGGGAATAATAATACTCGACTC
ACTTTACTGTGGTAAAATATTTAAAATTCTTTGTAACCCTCTTCTTCCAT
CGCGCATGACTACAAGCTCAAACTCAAAATTATTTATTACCCACAAAATA
ATTTATTGTTGCCATCTTTAGATTGACATTGATGCCACTTTTAATGACGG
ATATTAATTTGATGTTTTAAAATGATAAAAAGGCCATTTTCAAAAAAAAC
AAGAACAAAAAAACGGAAAATAATTGCGGCACTAGATTTTCTCTTCTTTA
AGACACTATTTTGAAATTGAGCATCAGTTGTGTAAACGACGCTCTATGTC
ACAATGACCACTATATAATATCAAGTTTCTGATTTCGGATTTTTAGAGCT
ACATACTTTCGATTGAAGAGTAAGAAAGAACGCTTAGTTGCAGAGATCAA
AGTGGAAAAAGAAGTCGAAGAACGAGCAATACAAAACGTTGATACAGCCG
AGTAATTCATTTATTTATTTTGTTTAAATTGACGAGTTTGACTTTTGCAG
GTCTGTATAAGCACCTCCTATTTTTTGGAACAGGGCTAGGGTTGCTTAGC
ATTCTAGCTCATTTCCGAAAAATTTGCTTTGACCACCCCTGATTATTTTA
CCATCTTCAAGGGCTATCGTTTGCCATGCTTAGATTATCTAAAAAGCATT
TGCTTTTGGCTCATTTCAGGACTCGAGCCTTAGCAACCTGGTTGCTTATG
AAAAGAAATATGTACCTTTATTAAGAATAGAAGGGAAGTTTGAAAATCAT
TGCACAATAGCTGCTGCATTCACGGCCAAAATGTGGACTAGCTAAT

Coding sequence (CDS) from alignment at scaffold_318:148003..158298-

>TCONS_00059149 ID=TCONS_00059149|Name=TCONS_00059149|organism=Clytia hemisphaerica|type=CDS|length=4266bp|location=Sequence derived from alignment at scaffold_318:148003..158298- (Clytia hemisphaerica)
AGCTACATACTTTCGATTGAAGAGTAAGAAAGAACGCTTAGTTGCAGAGA
TCAAAGTGGAAAAAGAAGTCGAAGAACGAGCAATACAAAACGTTGATACA
GCCGAGTAAGGAAGAACTTGCAAAGTGTCAAAATCATTTAAAAGGACTTG
AAGATGAACTAGAAACTGTTGAAAAGGAAATCAGGGACGCTGATAATAAC
AATCAAAAGAAATGATGAGAAGGAAAGCATTAAAGAAACACTTGGATCAG
TTGGGAGATCTTGTTGTTGAGAAAGAATTTGCTGTACAACAAGCAAGAAG
TTTTGATGAGTTCGGTAAAGACGATTTCGAAGATGACAGCGCCACTTCCG
AACCTCAATCAACTGTTTCAAGAGAGTGACGCCAAGATTGATGGAGGATG
AATCAGAAAGCTTATCTTCAGATTTCAATCTCTACAGTGATGAAGAGACA
AGCTCTATTGCAGGATGTCAACTATAATCTATAAGCAAGATATTGATGAT
AATCGTCCAATGACGGGTGATGAAACAGACACTGAAGATGCTCATTTCAA
ATATGTCACATCACCGACTCTAGCAAATGATGCAGCTGCATTATCAGATA
GTAGTCTTCAACGTGAAAGTAGTATTGACATTGCAGAAGAAATGAATGGT
ATGCAAAGTGGGGGGACTGCTGGTGGTTATAATGACAAAGAAATGTTGAC
AGAAAGCTTCAAGCTACATACTTTCGATTGAAGAGTAAGAAAGAACGCTT
AGTTGCAGAGATCAAAGTGGAAAAAGAAGTCGAAGAACGAGCAATACAAA
ACGTTGATACAGCCGAGTAAGGAAGAACTTGCAAAGTGTCAAAATCATTT
AAAAGGACTTGAAGATGAACTAGAAACTGTTGAAAAGGAAATCAGGGACG
CTGATAATAACAATCAAAAGAAATGATGAGAAGGAAAGCATTAAAGAAAC
ACTTGGATCAGTTGGGAGATCTTGTTGTTGAGAAAGAATTTGCTGTACAA
CAAGCAAGAAGTTTTGATGAGTTCGGTAAAGACGATTTCGAAGATGACAG
CGCCACTTCCGAACCTCAATCAACTGTTTCAAGAGAGTGACGCCAAGATT
GATGGAGGATGAATCAGAAAGCTTATCTTCAGATTTCAATCTCTACAGTG
ATGAAGAGACAAGCTCTATTGCAGGATGTCAACTATAATCTATAAGCAAG
ATATTGATGATAATCGTCCAATGACGGGTGATGAAACAGACACTGAAGAT
GCTCATTTCAAATATGTCACATCACCGACTCTAGCAAATGATGCAGCTGC
ATTATCAGATAGTAGTCTTCAACGTGAAAGTAGTATTGACATTGCAGAAG
AAATGAATGGTATGCAAAGTGGGGGGACTGCTGGTGGTTATAATGACAAA
GAAATGTTGACAGAAAGCTTCAAGCTACATACTTTCGATTGAAGAGTAAG
AAAGAACGCTTAGTTGCAGAGATCAAAGTGGAAAAAGAAGTCGAAGAACG
AGCAATACAAAACGTTGATACAGCCGAGTAAGGAAGAACTTGCAAAGTGT
CAAAATCATTTAAAAGGACTTGAAGATGAACTAGAAACTGTTGAAAAGGA
AATCAGGGACGCTGATAATAACAATCAAAAGAAATGATGAGAAGGAAAGC
ATTAAAGAAACACTTGGATCAGTTGGGAGATCTTGTTGTTGAGAAAGAAT
TTGCTGTACAACAAGCAAGAAGTTTTGATGAGTTCGGTAAAGACGATTTC
GAAGATGACAGCGCCACTTCCGAACCTCAATCAACTGTTTCAAGAGAGTG
ACGCCAAGATTGATGGAGGATGAATCAGAAAGCTTATCTTCAGATTTCAA
TCTCTACAGTGATGAAGAGACAAGCTCTATTGCAGGATGTCAACTATAAT
CTATAAGCAAGATATTGATGATAATCGTCCAATGACGGGTGATGAAACAG
ACACTGAAGATGCTCATTTCAAATATGTCACATCACCGACTCTAGCAAAT
GATGCAGCTGCATTATCAGATAGTAGTCTTCAACGTGAAAGTAGTATTGA
CATTGCAGAAGAAATGAATGGTATGCAAAGTGGGGGGACTGCTGGTGGTT
ATAATGACAAAGAAATGTTGACAGAAAGCTTCAAGCTACATACTTTCGAT
TGAAGAGTAAGAAAGAACGCTTAGTTGCAGAGATCAAAGTGGAAAAAGAA
GTCGAAGAACGAGCAATACAAAACGTTGATACAGCCGAGTAAGGAAGAAC
TTGCAAAGTGTCAAAATCATTTAAAAGGACTTGAAGATGAACTAGAAACT
GTTGAAAAGGAAATCAGGGACGCTGATAATAACAATCAAAAGAAATGATG
AGAAGGAAAGCATTAAAGAAACACTTGGATCAGTTGGGAGATCTTGTTGT
TGAGAAAGAATTTGCTGTACAACAAGCAAGAAGTTTTGATGAGTTCGGTA
AAGACGATTTCGAAGATGACAGCGCCACTTCCGAACCTCAATCAACTGTT
TCAAGAGAGTGACGCCAAGATTGATGGAGGATGAATCAGAAAGCTTATCT
TCAGATTTCAATCTCTACAGTGATGAAGAGACAAGCTCTATTGCAGGATG
TCAACTATAATCTATAAGCAAGATATTGATGATAATCGTCCAATGACGGG
TGATGAAACAGACACTGAAGATGCTCATTTCAAATATGTCACATCACCGA
CTCTAGCAAATGATGCAGCTGCATTATCAGATAGTAGTCTTCAACGTGAA
AGTAGTATTGACATTGCAGAAGAAATGAATGGTATGCAAAGTGGGGGGAC
TGCTGGTGGTTATAATGACAAAGAAATGTTGACAGAAAGCTTCAAGCTAC
ATACTTTCGATTGAAGAGTAAGAAAGAACGCTTAGTTGCAGAGATCAAAG
TGGAAAAAGAAGTCGAAGAACGAGCAATACAAAACGTTGATACAGCCGAG
TAAGGAAGAACTTGCAAAGTGTCAAAATCATTTAAAAGGACTTGAAGATG
AACTAGAAACTGTTGAAAAGGAAATCAGGGACGCTGATAATAACAATCAA
AAGAAATGATGAGAAGGAAAGCATTAAAGAAACACTTGGATCAGTTGGGA
GATCTTGTTGTTGAGAAAGAATTTGCTGTACAACAAGCAAGAAGTTTTGA
TGAGTTCGGTAAAGACGATTTCGAAGATGACAGCGCCACTTCCGAACCTC
AATCAACTGTTTCAAGAGAGTGACGCCAAGATTGATGGAGGATGAATCAG
AAAGCTTATCTTCAGATTTCAATCTCTACAGTGATGAAGAGACAAGCTCT
ATTGCAGGATGTCAACTATAATCTATAAGCAAGATATTGATGATAATCGT
CCAATGACGGGTGATGAAACAGACACTGAAGATGCTCATTTCAAATATGT
CACATCACCGACTCTAGCAAATGATGCAGCTGCATTATCAGATAGTAGTC
TTCAACGTGAAAGTAGTATTGACATTGCAGAAGAAATGAATGGTATGCAA
AGTGGGGGGACTGCTGGTGGTTATAATGACAAAGAAATGTTGACAGAAAG
CTTCAAGCTACATACTTTCGATTGAAGAGTAAGAAAGAACGCTTAGTTGC
AGAGATCAAAGTGGAAAAAGAAGTCGAAGAACGAGCAATACAAAACGTTG
ATACAGCCGAGTAAGGAAGAACTTGCAAAGTGTCAAAATCATTTAAAAGG
ACTTGAAGATGAACTAGAAACTGTTGAAAAGGAAATCAGGGACGCTGATA
ATAACAATCAAAAGAAATGATGAGAAGGAAAGCATTAAAGAAACACTTGG
ATCAGTTGGGAGATCTTGTTGTTGAGAAAGAATTTGCTGTACAACAAGCA
AGAAGTTTTGATGAGTTCGGTAAAGACGATTTCGAAGATGACAGCGCCAC
TTCCGAACCTCAATCAACTGTTTCAAGAGAGTGACGCCAAGATTGATGGA
GGATGAATCAGAAAGCTTATCTTCAGATTTCAATCTCTACAGTGATGAAG
AGACAAGCTCTATTGCAGGATGTCAACTATAATCTATAAGCAAGATATTG
ATGATAATCGTCCAATGACGGGTGATGAAACAGACACTGAAGATGCTCAT
TTCAAATATGTCACATCACCGACTCTAGCAAATGATGCAGCTGCATTATC
AGATAGTAGTCTTCAACGTGAAAGTAGTATTGACATTGCAGAAGAAATGA
ATGGTATGCAAAGTGGGGGGACTGCTGGTGGTTATAATGACAAAGAAATG
TTGACAGAAAGCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037247XLOC_037247Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059149-proteinTCONS_00059149-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059149-exon-scaffold_318-1575043694:158252..158298TCONS_00059149-exon-scaffold_318-1575043694:158252..158298Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1575043694:151630..151897TCONS_00059149-exon-scaffold_318-1575043694:151630..151897Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1575043694:151153..151240TCONS_00059149-exon-scaffold_318-1575043694:151153..151240Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1575043694:150753..150831TCONS_00059149-exon-scaffold_318-1575043694:150753..150831Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1575043694:149943..150031TCONS_00059149-exon-scaffold_318-1575043694:149943..150031Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1575043694:149370..149468TCONS_00059149-exon-scaffold_318-1575043694:149370..149468Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1575043694:148003..148452TCONS_00059149-exon-scaffold_318-1575043694:148003..148452Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1510915933:158252..158298TCONS_00059149-exon-scaffold_318-1510915933:158252..158298Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1510915933:151630..151897TCONS_00059149-exon-scaffold_318-1510915933:151630..151897Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1510915933:151153..151240TCONS_00059149-exon-scaffold_318-1510915933:151153..151240Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1510915933:150753..150831TCONS_00059149-exon-scaffold_318-1510915933:150753..150831Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1510915933:149943..150031TCONS_00059149-exon-scaffold_318-1510915933:149943..150031Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1510915933:149370..149468TCONS_00059149-exon-scaffold_318-1510915933:149370..149468Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1510915933:148003..148452TCONS_00059149-exon-scaffold_318-1510915933:148003..148452Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1491911889:158252..158298TCONS_00059149-exon-scaffold_318-1491911889:158252..158298Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1491911889:151630..151897TCONS_00059149-exon-scaffold_318-1491911889:151630..151897Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1491911889:151153..151240TCONS_00059149-exon-scaffold_318-1491911889:151153..151240Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1491911889:150753..150831TCONS_00059149-exon-scaffold_318-1491911889:150753..150831Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1491911889:149943..150031TCONS_00059149-exon-scaffold_318-1491911889:149943..150031Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1491911889:149370..149468TCONS_00059149-exon-scaffold_318-1491911889:149370..149468Clytia hemisphaericaexon
TCONS_00059149-exon-scaffold_318-1491911889:148003..148452TCONS_00059149-exon-scaffold_318-1491911889:148003..148452Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_318supercontigscaffold_318:148003..158298 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.94719	2.16465	1.67558	2.07068	11.9215	8.34156	8.66182	10.6403	9.25443	9.59324	8.91688	7.15842	5.95706	6.9665	5.01977	7.04817	9.26747	8.03058	5.58874	9.22718	6.47632	5.78523	3.21495	4.50607	19.8608	17.3521	2.88358	2.96345	1.68576	1.93771
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059149 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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