|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059207 ID=TCONS_00059207|Name=TCONS_00059207|organism=Clytia hemisphaerica|type=transcript|length=943bp
GGAGCCCGTACCAAATGGCTTTGGAAAATATCAATATGAATCCAAACATG
ACTagttgggacgagatggagtttttacaagctctattttatttggttgg
tcgttaaccagtaataaaacaattttgttactttttctaaagaacgcatc
atttttattaacttcaaatgaccaattattaaagtatcttataaaaattc
CATCTCATCTGGACTAGTTGCGAGTTATAACGATGTCGCAGATAAGAGTT
GGAGTAAAGTAAGACAAAAAATATAAGCAAACAAAccttcaaaaataaac
aataaaatccGTTTCTGCACAGACCATCAACCCTTGCATTTGATAAAGTG
ATGCACACGTTTCTTACTCTCTATTCCAAACAAACACAAACAAGATTGAA
ACTTGATACAAACCATGTGATCGTACAATCAATCAATCACAGATGATATC
AAATTACAAGAAATTCGTTTATTTAAAATGATGGCACTCGTTAAGAAAGC
ACTGAATGGATTTTTGTGGTTTCTCTCTATTTATTATTAATTTACGTTAT
CTAAAAAAAGATTGATATGGTCATAAATTCAAACTAGNCCAAAAAACCCC
GAAgggaaaaataacgaaaaacgtCCGCCGCGCATTTAGcgaaagctact
tgctagtttggTAAGCTATAAACGTTGCCGGATTATTACGGAACACTAAT
TAACCGGAAGACCGATTACAAAACAAACGCAAAaatcgagattcctgtcc
aatatccttgcgtgaagctatgtagGCCACCCTACGCTCGCAAGCTCGCT
ACGGGCGGCAAAAATGAAACATGAAATGTTTGAAGAAGGTTGTAAGAGAA
CAATAACACATCACTTTTTTAGTAAGTATAATGCTTATCTAGGAGGTTCA
AATCCTTGAATTATCAGAATTATAAGCATATGCTGGGGCACAT Run BLAST on NCBI transcript from alignment at scaffold_319:101397..102339 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059207 ID=TCONS_00059207|Name=TCONS_00059207|organism=Clytia hemisphaerica|type=transcript|length=943bp|location=Sequence derived from alignment at scaffold_319:101397..102339 (Clytia hemisphaerica)
ATGTGCCCCAGCATATGCTTATAATTCTGATAATTCAAGGATTTGAACCT
CCTAGATAAGCATTATACTTACTAAAAAAGTGATGTGTTATTGTTCTCTT
ACAACCTTCTTCAAACATTTCATGTTTCATTTTTGCCGCCCGTAGCGAGC
TTGCGAGCGTAGGGTGGCctacatagcttcacgcaaggatattggacagg
aatctcgattTTTGCGTTTGTTTTGTAATCGGTCTTCCGGTTAATTAGTG
TTCCGTAATAATCCGGCAACGTTTATAGCTTAccaaactagcaagtagct
ttcgCTAAATGCGCGGCGGacgtttttcgttatttttcccTTCGGGGTTT
TTTGGNCTAGTTTGAATTTATGACCATATCAATCTTTTTTTAGATAACGT
AAATTAATAATAAATAGAGAGAAACCACAAAAATCCATTCAGTGCTTTCT
TAACGAGTGCCATCATTTTAAATAAACGAATTTCTTGTAATTTGATATCA
TCTGTGATTGATTGATTGTACGATCACATGGTTTGTATCAAGTTTCAATC
TTGTTTGTGTTTGTTTGGAATAGAGAGTAAGAAACGTGTGCATCACTTTA
TCAAATGCAAGGGTTGATGGTCTGTGCAGAAACggattttattgtttatt
tttgaaggTTTGTTTGCTTATATTTTTTGTCTTACTTTACTCCAACTCTT
ATCTGCGACATCGTTATAACTCGCAACTAGTCCAGATGAGATGgaatttt
tataagatactttaataattggtcatttgaagttaataaaaatgatgcgt
tctttagaaaaagtaacaaaattgttttattactggttaacgaccaacca
aataaaatagagcttgtaaaaactccatctcgtcccaactAGTCATGTTT
GGATTCATATTGATATTTTCCAAAGCCATTTGGTACGGGCTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059207-exon-scaffold_319-1491911889:101397..102339 | TCONS_00059207-exon-scaffold_319-1491911889:101397..102339 | Clytia hemisphaerica | exon |
| TCONS_00059207-exon-scaffold_319-1510915933:101397..102339 | TCONS_00059207-exon-scaffold_319-1510915933:101397..102339 | Clytia hemisphaerica | exon |
| TCONS_00059207-exon-scaffold_319-1575043694:101397..102339 | TCONS_00059207-exon-scaffold_319-1575043694:101397..102339 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_319 | supercontig | scaffold_319:101397..102339 . |
Blast
The following BLAST results are available for this feature:
|
