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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059346 ID=TCONS_00059346|Name=TCONS_00059346|organism=Clytia hemisphaerica|type=transcript|length=746bp
AAGAACTGAAGATGGGAGAGCACATATCTTCATGTTAAGTTCAAGTAGAT
TATATAATTAAGTACAAGTTAttggaaaaatatcaaatacaaTCAAATTG
TCCTGGTTAGTTATTATACTAAAAAAATACCTATTTTATCTTTTATTCAA
CCTACTCAACTGATATTTCTGATATTAGCATCTGATGTCTTGACATTTCC
ACAACTCAATATTACATTCGTATTGCTCCCGAGGGGACTTTGCAACAGAG
TCACACATGCGATACTGCCCGTCACACCATCTTCGTCCACATTTACGCCA
ATCGTTGTCATATTCCAAGTCGTCCATTGGTTCGATTTGATTCAGGTCTT
CACTGATTGGTCCAAAATCCAATAATTCGTTTTCTATTGGTTCGATTACG
GTCTGTtcattgaaatttctttttttgtttgttgtttgaaaagggtaatg
atttgatttgattggtttcTTAAAGTCCATTGAATCTTCATTGATTGGTT
GATAAAAATCTTTAAGGTCATTTCTCATTGGTTGTAGAGAATCTAAATCA
ATTCTGATTGGTTCATCTGCATTATCAAAACCGTGTCTAATTGGTTTAAA
ACTTCTTTTGTTATCATTATCGATTGTTTTTCGAAAGCCCTTCTTTAAAT
AATAAGCCGACCCAGACTCGATTAAAGATGATACAATCAGAAGTAAAATG
ATTGGACGAAATGATATCTGTATCACCATCTTAAGTAGTGTTCCTG Run BLAST on NCBI transcript from alignment at scaffold_326:394247..395052+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059346 ID=TCONS_00059346|Name=TCONS_00059346|organism=Clytia hemisphaerica|type=transcript|length=806bp|location=Sequence derived from alignment at scaffold_326:394247..395052+ (Clytia hemisphaerica)
AAGAACTGAAGATGGGAGAGCACATATCTTCATGTTAAGTTCAAGTAGAT
TATATAATTAAGTACAAGTTAttggaaaaatatcaaatacaaTCAAATTG
TCCTGGTTAGTTATTATACTAAAAAAATACCTATTTTATCTTTTATTCAA
CCTACTCAACTGATATTTCTGATATTAGCATCTGATGTCTTGACATTTCC
ACAACTCAATATTACATTCGTATTGCTCCCGAGGGGACTTTGCAACAGAG
TCACACATGCGATACTGCCCGTCACACCATCTTCGTCCACATTTACGCCA
ATCGTTGTCATATTCCAAGTCGTCCATTGGTTCGATTTGATTCAGGTCTT
CACTGATTTGTTTAAAATCCAAGAAGTCGTTTTTTATTGGTTTGATTTGA
CTCAGGTCTTCACTGATTGGTCCAAAATCCAATAATTCGTTTTCTATTGG
TTCGATTACGGTCTGTtcattgaaatttctttttttgtttgttgtttgaa
aagggtaatgatttgatttgattggtttcTTAAAGTCCATTGAATCTTCA
TTGATTGGTTGATAAAAATCTTTAAGGTCATTTCTCATTGGTTGTAGAGA
ATCTAAATCAATTCTGATTGGTTCATCTGCATTATCAAAACCGTGTCTAA
TTGGTTTAAAACTTCTTTTGTTATCATTATCGATTGTTTTTCGAAAGCCC
TTCTTTAAATAATAAGCCGACCCAGACTCGATTAAAGATGATACAATCAG
AAGTAAAATGATTGGACGAAATGATATCTGTATCACCATCTTAAGTAGTG
TTCCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059346-exon-scaffold_326-1491911889:394247..394591 | TCONS_00059346-exon-scaffold_326-1491911889:394247..394591 | Clytia hemisphaerica | exon |
| TCONS_00059346-exon-scaffold_326-1510915933:394247..394591 | TCONS_00059346-exon-scaffold_326-1510915933:394247..394591 | Clytia hemisphaerica | exon |
| TCONS_00059346-exon-scaffold_326-1575043694:394247..394591 | TCONS_00059346-exon-scaffold_326-1575043694:394247..394591 | Clytia hemisphaerica | exon |
| TCONS_00059346-exon-scaffold_326-1491911889:394652..395052 | TCONS_00059346-exon-scaffold_326-1491911889:394652..395052 | Clytia hemisphaerica | exon |
| TCONS_00059346-exon-scaffold_326-1510915933:394652..395052 | TCONS_00059346-exon-scaffold_326-1510915933:394652..395052 | Clytia hemisphaerica | exon |
| TCONS_00059346-exon-scaffold_326-1575043694:394652..395052 | TCONS_00059346-exon-scaffold_326-1575043694:394652..395052 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_326 | supercontig | scaffold_326:394247..395052 + |
Blast
The following BLAST results are available for this feature:
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