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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059368 ID=TCONS_00059368|Name=TCONS_00059368|organism=Clytia hemisphaerica|type=transcript|length=1172bp
GCAGATTTCATTTCAGGAACTTTTGATAAACAAAGGAAAAtacaaaagtt
gtattttttactgctctttTCACATAAtgtttttgcaaacttcaaaaaac
tgattttgtcCCGCTTTAGCAAGACattagcttaagtgcttgcatGCAGC
ATTGGGTAAAAAGTCCAAATATATGTGTTTCCTGTAACTTTTATGTGAAA
GAGTTAGGGCTATACTGTTGGGTTCGACAATAAATCACAATTATTCAAtt
gcttttgattgttttcaattGATGTGAGGTTCGATTCTATTGATTGACAC
CATCTGGATATATAAAAACCAACCATCTGTAAAATTTGAGAGTtgtcgtt
tgttttggttttcaataCAGCCGAAACGATCAAAAGAAATATGGCAAAGT
AAGATTTGGTATGGATGAATGAACTTCAGTAAAATTGATATTTCTGGTGA
AAGTTTCTTTTCCACAAGTCCACAACCTACACCCCTGTACTTACCTACTT
TCTGGTAATTCAAACTTCCTGGAAAAAGTGCgtgctccaccgttgtgtat
aaacttgtttgggaggtaaataAACGTGTTTTTGCCTGCAAAGGGGTTAA
GGGAagtgttgtttttttgtggcaaaaaattTTCCGTGTGGTGTCATGTA
TAGaaagaacatactaaaatttgaggggattttgatCGATGGAATttaag
aaaagctaaaaaaacaaCTTCCTCTAAGGtaacgcaggcaaaaacaggtt
tgtttacctccagagaccaaacggtggagaacATCAAAATAATGTGTGCG
CATCTGTTTTGCGAATTGCGGGGAAAGGTGTGTTGCAAATTGAATTGGTA
TGTCTGGGTGTGATGGTTGGAACATGACCCCAGACGGTCATAATCAATAA
AATTGATAGCTAATTGATATTAATAGATgaattagatatcgattaaaaTC
CATAATCAAGTCCTGTGaagccttaattcaaaaggggcctaactccattt
tggtcattttgagaaaattgcgattaaagtttttcctttattctaaaacc
atttttgattgtaaagctttgaagtaaatgttttctgaaagccatagctt
gaacttttttttcaataaaaaggcaTTCTTTTGGAAAGTAGATATTTTTG
TACGTACTAGGTGCAACTTATA Run BLAST on NCBI transcript from alignment at scaffold_326:51230..52401 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059368 ID=TCONS_00059368|Name=TCONS_00059368|organism=Clytia hemisphaerica|type=transcript|length=1172bp|location=Sequence derived from alignment at scaffold_326:51230..52401 (Clytia hemisphaerica)
TATAAGTTGCACCTAGTACGTACAAAAATATCTACTTTCCAAAAGAAtgc
ctttttattgaaaaaaaagttcaagctatggctttcagaaaacatttact
tcaaagctttacaatcaaaaatggttttagaataaaggaaaaactttaat
cgcaattttctcaaaatgaccaaaatggagttaggccccttttgaattaa
ggcttCACAGGACTTGATTATGGAttttaatcgatatctaattcATCTAT
TAATATCAATTAGCTATCAATTTTATTGATTATGACCGTCTGGGGTCATG
TTCCAACCATCACACCCAGACATACCAATTCAATTTGCAACACACCTTTC
CCCGCAATTCGCAAAACAGATGCGCACACATTATTTTGATgttctccacc
gtttggtctctggaggtaaacaaacctgtttttgcctgcgttaCCTTAGA
GGAAGttgtttttttagcttttcttaaATTCCATCGatcaaaatcccctc
aaattttagtatgttctttCTATACATGACACCACACGGAAaattttttg
ccacaaaaaaacaacactTCCCTTAACCCCTTTGCAGGCAAAAACACGTT
tatttacctcccaaacaagtttatacacaacggtggagcacGCACTTTTT
CCAGGAAGTTTGAATTACCAGAAAGTAGGTAAGTACAGGGGTGTAGGTTG
TGGACTTGTGGAAAAGAAACTTTCACCAGAAATATCAATTTTACTGAAGT
TCATTCATCCATACCAAATCTTACTTTGCCATATTTCTTTTGATCGTTTC
GGCTGtattgaaaaccaaaacaaacgacaACTCTCAAATTTTACAGATGG
TTGGTTTTTATATATCCAGATGGTGTCAATCAATAGAATCGAACCTCACA
TCaattgaaaacaatcaaaagcaaTTGAATAATTGTGATTTATTGTCGAA
CCCAACAGTATAGCCCTAACTCTTTCACATAAAAGTTACAGGAAACACAT
ATATTTGGACTTTTTACCCAATGCTGCatgcaagcacttaagctaatGTC
TTGCTAAAGCGGgacaaaatcagttttttgaagtttgcaaaaacaTTATG
TGAaaagagcagtaaaaaatacaacttttgtaTTTTCCTTTGTTTATCAA
AAGTTCCTGAAATGAAATCTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059368-exon-scaffold_326-1491911889:51230..52401 | TCONS_00059368-exon-scaffold_326-1491911889:51230..52401 | Clytia hemisphaerica | exon |
| TCONS_00059368-exon-scaffold_326-1510915933:51230..52401 | TCONS_00059368-exon-scaffold_326-1510915933:51230..52401 | Clytia hemisphaerica | exon |
| TCONS_00059368-exon-scaffold_326-1575043694:51230..52401 | TCONS_00059368-exon-scaffold_326-1575043694:51230..52401 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_326 | supercontig | scaffold_326:51230..52401 . |
Blast
The following BLAST results are available for this feature:
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