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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059428 ID=TCONS_00059428|Name=TCONS_00059428|organism=Clytia hemisphaerica|type=transcript|length=1140bp
AATGCTGTTGGGATTCACTCTACAAACATCCAGAACAATTTAGACAAAAC
AACACCAAACTATCACGAACAGAAAGTCCCCAATGCTACTGGAATTCACT
CTACAAACATCCAGAACAATTTAGACAAAACACCACCAAACTATCACGAA
CAGAAAGTCCCCAATGCTACTGGAATTCACTCTACAAACATCCAGAACAA
TTTAGACAAAACACCACCAAACTATCATGAACTTAAAGTCCCCAATGCTG
CTGGAATTCACTCTACAAACATCCAGAACAATTTAGACAAAACAGTCCCC
ACGAGAAAGGGCTTGAAACCTGCCTTATTGTTTAGCGTCCGTGGACTGAT
TAAAAACCGTGAGATAGGTGATATTGACATGGTGTTGGCTTTCAAATTGA
ATGGTTTCTGGCCAGAGTGTGCCAACCATTGGAAGACGGTACAATTAAAC
ATAAGTGACACGTTCCGAAATAAGATTCTCGAAGAAGGAGTACTAATCGT
ACCAAAAGCACCGAACCAGCAGAAAAGCAGCCTCCGacatttcaagattt
tcattcTCCTTAGCTGAATCACATCTCATGGAACAATTTAGTTGTCAACA
GATTTCAGCTTATCGCATCTTAAAGATCAGCCGTCAAATCCTGTTCCATA
AATTCCAGTTTNGTCTCATAGAACAATTTAGTTGTCAACAGATTTCAGCT
TATCGCATCTTAAAGATCAGCCATCAAATCCTGTTCCATAAATTCAAGTT
TGGCTGCATGGATATTGGACAGTTTATACGTGAAAAATTTGTTacttatt
acttgaaaaaaatcGCCTTGGAAGTATTTACCAAGCCAATGAAATTTGCC
GACACAGTCGTGATTAAAAATACAAGATATTGGTTGGTTTTACTTCTCGA
AGAATTAATTCGATGTCTAGATGAAGGCTCGATCAAGCATTATTTCACTG
GTGAAAACCTGGTCAATTTTGATGTGTACTTTGAAGACGTGAAGGAATAC
TGTGTTAGCTTCGCGAATTTCGAAGACTTCAAGTCCTCGGTACAGCCTCA
GTACCAAGAAGCTTTGGATAAACTTTTCGTTGATCTCGGGCTTGATGTTA
CTATTCATTTAAATTTGATCATTAAGTTAGCTTACAAAGG Run BLAST on NCBI transcript from alignment at scaffold_327:182474..183694- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059428 ID=TCONS_00059428|Name=TCONS_00059428|organism=Clytia hemisphaerica|type=transcript|length=1221bp|location=Sequence derived from alignment at scaffold_327:182474..183694- (Clytia hemisphaerica)
AATGCTGTTGGGATTCACTCTACAAACATCCAGAACAATTTAGACAAAAC
AACACCAAACTATCACGAACAGAAAGTCCCCAATGCTACTGGAATTCACT
CTACAAACATCCAGAACAATTTAGACAAAATACCACCAAACTATCATGAA
CTTAAAGTCCCCAATGCTGTTGGGATTCACTCTACAAACATCCAGAACAA
TTTAGACAAAACACCACCAAACTATCACGAACAGAAAGTCCCCAATGCTA
CTGGAATTCACTCTACAAACATCCAGAACAATTTAGACAAAACACCACCA
AACTATCATGAACTTAAAGTCCCCAATGCTGCTGGAATTCACTCTACAAA
CATCCAGAACAATTTAGACAAAACAGTCCCCACGAGAAAGGGCTTGAAAC
CTGCCTTATTGTTTAGCGTCCGTGGACTGATTAAAAACCGTGAGATAGGT
GATATTGACATGGTGTTGGCTTTCAAATTGAATGGTTTCTGGCCAGAGTG
TGCCAACCATTGGAAGACGGTACAATTAAACATAAGTGACACGTTCCGAA
ATAAGATTCTCGAAGAAGGAGTACTAATCGTACCAAAAGCACCGAACCAG
CAGAAAAGCAGCCTCCGACATTTCAAGATTTTCATTCTCCTTAGCTGAAT
CACATCTCATGGAACAATTTAGTTGTCAACAGATTTCAGCTTATCGCATC
TTAAAGATCAGCCGTCAAATCCTGTTCCATAAATTCCAGTTTNGTCTCAT
AGAACAATTTAGTTGTCAACAGATTTCAGCTTATCGCATCTTAAAGATCA
GCCATCAAATCCTGTTCCATAAATTCAAGTTTGGCTGCATGGATATTGGA
CAGTTTATACGTGAAAAATTTGTTACTTATTACTTGAAAAAAATCGCCTT
GGAAGTATTTACCAAGCCAATGAAATTTGCCGACACAGTCGTGATTAAAA
ATACAAGATATTGGTTGGTTTTACTTCTCGAAGAATTAATTCGATGTCTA
GATGAAGGCTCGATCAAGCATTATTTCACTGGTGAAAACCTGGTCAATTT
TGATGTGTACTTTGAAGACGTGAAGGAATACTGTGTTAGCTTCGCGAATT
TCGAAGACTTCAAGTCCTCGGTACAGCCTCAGTACCAAGAAGCTTTGGAT
AAACTTTTCGTTGATCTCGGGCTTGATGTTACTATTCATTTAAATTTGAT
CATTAAGTTAGCTTACAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059428-exon-scaffold_327-1575043694:183587..183694 | TCONS_00059428-exon-scaffold_327-1575043694:183587..183694 | Clytia hemisphaerica | exon |
| TCONS_00059428-exon-scaffold_327-1575043694:182474..183505 | TCONS_00059428-exon-scaffold_327-1575043694:182474..183505 | Clytia hemisphaerica | exon |
| TCONS_00059428-exon-scaffold_327-1510915933:183587..183694 | TCONS_00059428-exon-scaffold_327-1510915933:183587..183694 | Clytia hemisphaerica | exon |
| TCONS_00059428-exon-scaffold_327-1510915933:182474..183505 | TCONS_00059428-exon-scaffold_327-1510915933:182474..183505 | Clytia hemisphaerica | exon |
| TCONS_00059428-exon-scaffold_327-1491911889:183587..183694 | TCONS_00059428-exon-scaffold_327-1491911889:183587..183694 | Clytia hemisphaerica | exon |
| TCONS_00059428-exon-scaffold_327-1491911889:182474..183505 | TCONS_00059428-exon-scaffold_327-1491911889:182474..183505 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_327 | supercontig | scaffold_327:182474..183694 - |
Blast
The following BLAST results are available for this feature:
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