TCONS_00059433 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059433
Unique NameTCONS_00059433
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3268

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059433 ID=TCONS_00059433|Name=TCONS_00059433|organism=Clytia hemisphaerica|type=transcript|length=3268bp
tttaCTGACGTAGGTtgacccccctggaaattttgtgTACTGCACTCTCC
TTTAAGGTCGGGAGTGAGAAATAATACCCCCTGAAAATTCTGCCTTTAAT
TAACTCGCTGAGGTTACTTAATAACTCTTTGATTACTTTTCTAATACATA
CATGTCAATTGAAGTCTAAAGAGACGTGGGTCGATATCTTGTCACGTGGG
GTGTCGCAATCGAGCACGTGATGCATAATTTATGCgttattgcataaatt
atgcataaAACAACAATGAGGGAGAGTGCTGTGTCATATGGTGTTTTTTC
GTTTtccattcaaagaaaaaaaatcacattgCTTTTTTTTAGTGTCGTAA
CTCCTCTGTTCAGATCAGGCAGGTAACAGggaaatctcaaaatttcaaca
gaaaaacattacaaagaTAACTAATATTTTCTGTTTGATTTTCCCTTTGT
TACATACAAATATCAAAAAATCTGACTGACTGAACTTCAAGagggaaaat
attgaaataatatcacaaaaaaacgaaaatttggaTTGAGACGTTTTATT
TTATCATATGGTTTTTTGCCGAAAGTTCGTGATTTTATGGTGGATTGGAT
TAAGTAATATACAGTAAAAAAGCAAGATTGGGACTTTGGATTTGGTTGAA
TTTTCACTTACAGCAAAACAAGGACACAAAAAGTTAACATGTTTCGACCA
ACAAGTGAACCCATTATTTTCTTATACGCAACAATTTATATGATCAATTT
GTCGATCCTGCCACAATTCGTTTTACAGAAATTATGTCTACAAAAACATA
ACGGGAATGCTTCGTCATGCAGTGTCAGTGAAGTCGAAGAAGTAGACCAG
GAGCTTCAAAAGAGTGCTTCAGAATGGTGGTTCATCATTATCGCATCCGC
ACAAATCCCATCAGTCATCACATGTCTTATATGGGGACCCCTCAGCGACG
CAATCGGCCGAAGAGCATCAATCTACGTCGTACCTAGCGTCAGTTTAATT
CAGAACTTGGTATTTGTCGGCTGTGCATATTTTGCTACTTCACATATGGG
ATTTGTCGTCCTTGGATTCTGTCTTTCGACATTGTTTGGACAATTCCCTG
GTGTAATTTCATTATGTTATGGATTCATCACAGAAGTCACTGCAGATAAC
AAGGAAGCTAGGATCGCTCGCCTCGCTTTCGTAGATGCTTCTATTTTCTT
CGCTGGCGTCTTGTCTGGATTAGGCGCTGGTCAACTGTTAGAGAGACTAG
GTTTCGTAGCTGTCTTCATCTTCAGTATAACCATCAACACCTTTCTCCTG
CTCTACATCACGTTCTTGTTACCTGACTTAAAGAAACTGCGACAAAAAGA
AGCAATGAAATCAACAGAAGAAGAGGCAGAAGAACTTCAAGCAATCAACG
CAAAAGCTAAAGAAGCCGGGGAAGAAAACGCAGACGAAACTTCATCTTCA
ACATCTGAGGACTCCAAAGGAAGTCCACAAAAATTCTGTTTATCCCTCTT
AAACCCGTACACGCAAATCAAACAAGTCTTCAGAGTCATTTTCGCTAAAG
ATACACGACGCATGGTCTTGCCGCCGCTGCTTGCTTTCACGTTCAGCATT
TACGCTTATGTTGGTGATTTAACATCAACGGCCCTTTATTTGAAAGGACC
ACCCTTCCTGATGACTGCAGACTATATTGGATATTATTACGCCATCCAAG
CCTGTCTTCGTGGTATCGGAGTCATCAGTGTTACACAGATCTCACACCGT
TTTCTTCACTTATCAGACATGAATCTCATGCTTTTCGGGATCGCATCAGA
AGCTATCACTTACACCGCTATTGGGTTATCAAAGACCAGGACCCAGGTCT
ATTGCGTCAACATTATCGGTCTCGGTTTACCAGTCGCTAATGCTCTTTTA
AGAGGCTACACAACCAAACAAGTTGCCCCTGAAAATTATGGCGCTCTCCT
AGCTGCATTCGCTTCACTTGATTGTTTAGCTTACACTACAAATGCGATTA
CGTTGGAAATCTATAGAGCAACATTGGACAGTTACCCAGGCGCTATGTTT
GTTTTCCTGGGCGCATGCGCTGGAGTAGCCTTCTTGATTATgttcatttt
caagttttatattCGACGCTTTCCAGCTAAAACGCCTGAAGCACTGATGG
AGAAAAGTGAGCTTAAGAGTGATctgtaaatttgaaaacattcatcAGAG
CTACTTTGTATAGCTTGATTTTCCAATCAAAATGTGTTTGGTCAAATACA
CTTCTGGGCTAGGCTACTGTGCATTTTCGCATTGTAATGTCTTTGGAGCG
TTGACAGCAACCACGaacaaactttcaaattttatacaactggactgtcg
ttttttttattagtttatttttggtaaaatactAGTTAACTTTTATAGCA
ACCTCGCTCCCTCTGTGTAcaatcagctttttgatgcttaaaGCGCCACT
GTCGTCCATAAGTAACGTAaaaaagcctgggatacacgggggaCGAGGTC
ACATTTATATATGTAGGGCCGAGAACTGCCTGAtacaaaaatatgaattt
tacGCTTTTAgcctatacacgtttttttataagagcatccaaaataaGCC
AATAAGTTTTAATGAAATCTTGACGCGGTGAAAAATCTGTCTGCTTGAAT
CTTGTTACCGAAAACTACAGTCAGCTTTTACTTCTTTTTGAAATAAGGAC
CAAGTAACTCAATATGTAGACAGAGCCTTTTTCTGAAGTGATAAAATAAC
TGGCTTTGAACGAATGACCCAGAGGATAGTTCCTGTCGTAGTGGTCACCG
AAGGGCGGGGTTGATCCGGAAAAATTGTCCtagaatttccaaaaatttag
gtttttaaaaCCATTGACTAGATTTagttatgttttgtataagtgGAAAA
TAGCATTATAAACATATTCGacaccaaatatttttttatcatttttaaca
gttttaacaCTCTCGATAATTTGGTtttatttgacgaaaaaagataGAAA
TGTGACGATATTTAccattcaatattttcaaagtgTACAACTTTCCTTTC
CTTCCCTCCTCTAAGGTTATTTTCATTGACACCCTTCCGCCAGTAGCGTG
GTGGTAGGGGGTAGTGTCCCCCAGCAGCGGTTTTATTGAGGGGGCGCAAA
AAGGCTCTTCAAAACACTGAGTTCGGCCCTTTTTACCTCAGAAATGGCAG
TTTTTAGCCCTATAAAATGGAGAGATGTCGAAGAATTTTCGCGTTAGCTT
TTTACAATTTTCCTAGTN
Run BLAST on NCBI

protein sequence of TCONS_00059433-protein

>TCONS_00059433-protein ID=TCONS_00059433-protein|Name=TCONS_00059433-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MFRPTSEPIIFLYATIYMINLSILPQFVLQKLCLQKHNGNASSCSVSEVE
EVDQELQKSASEWWFIIIASAQIPSVITCLIWGPLSDAIGRRASIYVVPS
VSLIQNLVFVGCAYFATSHMGFVVLGFCLSTLFGQFPGVISLCYGFITEV
TADNKEARIARLAFVDASIFFAGVLSGLGAGQLLERLGFVAVFIFSITIN
TFLLLYITFLLPDLKKLRQKEAMKSTEEEAEELQAINAKAKEAGEENADE
TSSSTSEDSKGSPQKFCLSLLNPYTQIKQVFRVIFAKDTRRMVLPPLLAF
TFSIYAYVGDLTSTALYLKGPPFLMTADYIGYYYAIQACLRGIGVISVTQ
ISHRFLHLSDMNLMLFGIASEAITYTAIGLSKTRTQVYCVNIIGLGLPVA
NALLRGYTTKQVAPENYGALLAAFASLDCLAYTTNAITLEIYRATLDSYP
GAMFVFLGACAGVAFLIMFIFKFYIRRFPAKTPEALMEKSELKSDL
Run BLAST on NCBI

transcript from alignment at scaffold_327:235439..248600-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059433 ID=TCONS_00059433|Name=TCONS_00059433|organism=Clytia hemisphaerica|type=transcript|length=13162bp|location=Sequence derived from alignment at scaffold_327:235439..248600- (Clytia hemisphaerica)
TTTACTGACGTAGGTTGACCCCCCTGGAAATTTTGTGTACTGCACTCTCC TTTAAGGTCGGGAGTGAGAAATAATACCCCCTGAAAATTCTGCCTTTAAT TAACTCGCTGAGGTTACTTAATAACTCTTTGATTACTTTTCTAATACATA CATGTCAATTGAAGTCTAAAGAGACGTGGGTCGATATCTTGTCACGTGGG GTGTCGCAATCGAGCACGTGATGCATAATTTATGCGTTATTGCATAAATT ATGCATAAAACAACAATGAGGGAGAGTGCTGTGTCATATGGTGTTTTTTC GTTTTCCATTCAAAGAAAAAAAATCACATTGCTTTTTTTTAGTGTCGTAA CTCCTCTGTTCAGATCAGGCAGGTAACAGGGAAATCTCAAAATTTCAACA GAAAAACATTACAAAGATAACTAATATTTTCTGTTTGATTTTCCCTTTGT TACATACAAATATCAAAAAATCTGACTGACTGAACTTCAAGAGGGAAAAT ATTGAAATAATATCACAAAAAAACGAAAATTTGGATTGAGACGTTTTATT TTATCATATGGTTTTTTGCCGAAAGTTCGTGATTTTATGGTGGATTGGAT TAAGTAATATACAGTAAAAAAGCAAGATTGGGACTTTGGATTTGGTTGAA TTTTCACTTACAGCAAAACAAGGACACAAAAAGTTAACATGTTTCGACCA ACAAGTGAACCCATTATTTTCTTATACGCAACAATTTATATGATCAATTT GTCGATCCTGCCACAATTCGTTTTACAGAAATTATGTCTACAAAAACATA ACGGGAATGCTTCGTCATGCAGTGTCAGTGAAGTCGAAGAAGTAGACCAG GAGCTTCAAAAGGTAGGCTTTCTAGAAGGTGTGATGGCACTGGAAATGAT ATCTGTCCCGGGAAATATTTTTTCAAATTTTGATACTTTCAATAGTGTTT TAAACTCTGTCTGCCTTTAGGGTTATCGTTAGCTTGATGCTTTTCGTTCG GAGTTTCAGGAATTTGAACAGTTTTGTATAAAATTTGGGGGTCGAAAACA GGAATGGAAAAAGCATGTCACAATCTCCCAAACAGGTTCTAACTAGAGAT GCTTTTGAGTTCGCTTAGCTCTCAAGCTTATCAATAGGGTGTTATCAGTC TAATCACTTCAATGTTACTTTTCATTTTCATTAAAATAAAAGTCTCATCT TTAAAAAATATTCGAAGCTTTATCATGCTCCTGTTTTTATTTATTGTGCT GTTAATGCAGCGTAATGACAACGAAAAATAGATAAACGCACTTTTATTTC ATGAAAGAGTAAACATTAATTAGTACAAAAGGTACACATAACATGGAATA AAGATTTCTTCACCTAACTATGTACAGTTTACTGCTCAATTACAAAAAGT CTACCCCATGGCAATAATTTAAAATCGATTTTTTATAAGAACTGTCACAC TTTGGCTGAAGCTCTGTAATTATTTTTTTTCTTTAGATTTTCAGGTTCAT CAGTCAAAAGTATCGCTTTATCAATAAAGCTTGTAATCGACAAATTCTAA GTCATTTCTGAATGTGAAGCTTTTGACAAAATTGCATCTTATATTCTTAT AAAAAAATCGCTTAGTGTATTGATCTTCACTGATGTTTAAGAGTTAATTA AAAAGCTTTCGAAATATGGAATAATTTCTTAATTGGAATGATTAAAAGTA ATTTTAGAAGCTATATCAATTTCGTAAAGTGGAAAACTGCTGATGAAATA AACATTTAAAACGACAGGCTACATAAGAACATAAGGCTCCGATTGCCAAA ATGTTAAGAACAAGTTAAAAACGTTTAAAACATTTTAAGGCTTTGTTGAC TCAAAAACACTCGTTTTCTTAGGAAAATGGGTAAAAAATGGTCACAAAAT GGTGAATATAAGAAAATTTTAAGAACATTTTCAGGCTTGAAACCCAAAAA ATTAAGAACATCCCAAGGCTTCAAAATTTTTGGATGTTCTTGTAAAATAA AACGTGTAAACCTTTAAAACGACAGGCTACATGATAACTGTCGAATTTAC AGTCCAGTCCATTTAAATACTCAAAGGTTTTTAAATTTTACTAGCATTAA CTAATTTTATAAATACTCTTTTGATTGAAATTTTGCCAAGCAGGATATAA ATAAAAAAATTTGTTTATAGTTTTTTACCGAATTTTCTTAACAAAAACGC AGTAGGTAATGCTTCACTCCTTTTAATTGGTTGGAATTTTTTCATCGTTC ATTTTTTTCTTACGGAAACGGTTTTAAGAGGATTTTTCGACTTTAATAAA TGTTCATATAGGTCAAGAAATCATATCTTTCCTCCGTTTTAAAAGACTTT TCCCCTATTTTTCTAGCAAAACCAATCTATGTTGAGTTACACTTCAAAAT TTTGTATTGTGGTCCCAAAGTTTTGCGGTTTTGTAAACTATACTGTAGAT ACTTTTTTCGGCGATATTTATTCCCACTGATTTTCTTCCTGTTTTCGACC TTTATAAAATTCTCCTTCCTTTTTTTCTTTTTCAAAAATAGGGAAACATC AATCAAAGATTTCTTAGGAAGGGAAATCGATATGAGGGGGATAATAGCGT CAACGGGTCTTGAGACTCAATATTTGAATCAAACACTAAACTTACACGAG AAAAATTAAAATAATTCAGAGACTTGATGAGCTCACTGGAACCGTGAAGA ACGATAAATACTTTTCACTGCGAGCTCACCTATAAAAAATCACGGCGAAT CTTTTTTTTAAAAACTGTCTACGACTAGATATTTTTGATGAGCTTACGGT TAAAACCTATGCAATCTATTTCAAACTTTCAGGCTTATCATCGTAAAGTC ACGGGGATGTTTAGGGGAGAGTAGAGCTGTTCGATAATCTATTGAAATCG ACCCAGCATAGTAAAAACTAGTCTCGTATTTCACTCTATACCACATATCT CTGTGTGACATCTTAAGATGGTATCACATTACAAGCTATATCTGTCTGTA ATTTGATTTATCAACTGCAAGTCGAGTATTTTAACAGGATTCATCCTTAG TGAGTGAGATTTCATGTATTTCGTAATCTACAAAGCATTCCAATATCCCC TTTTTACACTTTTTTATAAGAAAAACTATTTTGCCCCGCACGGCTCACAT GAACGAACCATTATTACTACAGATTTATAAGTAACCCGCGGGGCAAATAT ATTTCACGAATTGCACAGGATGGAACGAATAAAAATACCACGTATTAATT GGATATAGGGGTGACATTTGACCTGATATTAACCTCAATTTCTCTATAGT ACACAACGGTGGAGAAACCGAAACCACGAGAAAAATTTCTTATTCTCTGT CACAGATTTCAAATACATATAACTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTT CACTCCTTTTAATTGGTTGGAATTTTTTCATCGTTCATTTTTTTCTTACG GAAACGGTTTTAAGAGGATTTTTCGACTTTAATAAATGTTCATATAGGTC AAGAAATCATATCTTTCCTCCGTTTTAAAAGACTTTTCCCCTATTTTTCT AGCAAAACCAATCTATGTTGAGTTACACTTCAAAATTTTGTATTGTGGTC CCAAAGTTTTGCGGTTTTGTAAACTATACTGTAGATACTTTTTTCGGCGA TATTTATTCCCACTGATTTTCTTCCTGTTTTCGACCTTTATGAAATTCTC CTTCCTTTTTTTCTTTTTCAAAAATAGGGAAACATCAATCAAAGATTTCT TAGGAAGGGAAATCGATATGAGGGGGATAATAGCGTCAACGGGTCTTGAG ACTCAATATTTGAATCAAACACTAAACTTACACGAGAAAAATTAAAATAA TTCAGAGACTTGATGAGCTCACTGGAACCGTGAAGAACGATAAATACTTT TCACTGCGAGCTCACCTATAAAAAATCACGGCGAATCTTTTTTTTAAAAA CTGTCTACGACTAGATATTTTTGATGAGCTTACGGTTAAAACCTATGCAA TCTATTTCAAACTTTCAGGCTTATCATCGTAAAGTCACGGGGATGTTTAG GGGAGAGTAGAGCTGTTCGATAATCTATTGAAATCGACCCAGCATAGTAA AAACTAGTCTCGTATTTCACTCTATACCACATATCTCTGTGTGACATCTT AAGATGGTATCACATTACAAGCTATATCTGTCTGTAATTTGATTTATCAA CTGCAAGTCGAGTATTTTAACAGGATTCATCCTTAGTGAGTGAGATTTCA TGTATTTCGTAATCTACAAAGCATTCCAATATCCCCTTTTTACACTTTTT TATAAGAAAAACTATTTTGCCCCGCACGGCTCACATGAACGAACCATTAT TACTACAGATTTATAAGTAACCCGCGGGGCAAATATATTTCACGAATTGC ACAGGATGGAACGAATAAAAATACCACGTATTAATTGGATATAGGGGTGA CATTTGACCTGATATTAACCTCAATTTCTCTATAGTACACAACGGTGGAG AAACCGAAACCACGAGAAAAATTTCTTATTCTCTGTCACAGATTTCAAAT ACATATAACTGTACAATGTACTGATAAATTATAGATCAGTGAATGGCCGA AGCCGTATCACTCATAGAAGGTCTCATAAAGATTTTATGTGATTTTTTCT TCTTTTTTTGTTCTATATAGCTATTCTTCTCAAAATCTTTGAGATTTAGG TTCCTAATTTAATAAACCTTCATTCAATTACACCCACATCATGTTTGAGT TAGGGCGTGAATGAAGAGGGCGTTTCTCAGGGTGTGTTTTAAAAACCTAT TTTTGAACTTTTTTGGAATTTTTTATACCACGGTTAAATCTTGTCAATTT AGTGTATAAAAGATCAACTTCGCCTTTTTTCGCCAGTTTTCGCAAATAAA CTTTCATAAAACAGATGGGGAAAGCGCAAACCTTTACTTTTAGTTAGTTT AAATACAAACAAAATTGCTTATAATGCGATCCATAGAAGAGCTATTCGCT ACTGCATAACTTAAGTAACAAATCGATCAGACATTCTAATCAAATTATGC GCTCAGCTGCGGTGTCCGAAATTGTCAGATAATCGAAATCACACAATATA GTAGAGGGCCAAACCTTAGGATCCGCGACAACTTTTTTAGGACGCAACCA CATGAATTCCATTCGAAAGTTGGATGTATTTGAAGACATTTTCGCGAGGG GGGTCCGCTGCTAAAGCCTGGCAAAATTTTTTAGGGCCCAAATTGGGAAA TTAGCCCCGTAAAAAATTGACGTTAAGGGCGATGTTCGGAAAACACGGCT TATTATATATCGTTGGAACGGGAATCTTTCGCTGATCAAGAATCAATTCA CAACTATGGCCTGAAAATGAACGTATCTCGAGCTATGANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCATCTTCTTCATCACTAC TTTCTTGTTCTTCTTTTTCTTCGACCACTTTGCTTTCTTCCTTATTGCCT TCTTCCACAGACATTCTCAGCTTCGATGGAAGAGCAGGCTCATGACTTGT TTTTGGACGGCATACGCCGTTTATTATAGTGTAGCCGTTATCCAGAGGGG TCCCCGTTTCTGAAGGGTTTGCAAATGATTCTAGGTTTTTTATTTGATAC AAGACTCTTGTCGTTCGAAGGTCATTCGAGGACTTTTCAGGTCCGATTCT CGCAAGTGTTTTTTTGTTCTTAAGTTTTGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNATTTCCTTTAAAGTGTTGCTTTT CTTGTCATTGTATATAAACTTGATGACAAANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACAAAAAAATAA ATTATTACAAAAATCGAAATTTCTATGCACTATTCAACCTATTACCTTTT ACTCGCAATTTCGGCTTTGAAACTTATTTTAACCATGCCTATCATGAACG ACAAAACATTCTATACCTACCTTTTCCGAAAAAGCTCGAAATTGAATCAC AACCAGTCATCACATGAAATCGAATTATCACTTTTGACATTTCAGGAGTA GTTAAGCATTTTGCATCGAAGATTGCTTTCTTCCGTTTGATTCCAAGGGT ACCTGGCAAGATGTTCGATACATAAGAGCTTGCAACAATAACGTCTGTGT CCTCTGCATCGATTACCACCGTTGTATCAGAAGAAGATTTGCGAATTTGA GAATAGATGAAAAACATTATAACATCCGCTTCCACGCGCGTACATTCGAA ATCTGGAGTTCGTGTCTGTAAACCAAGAAAAATATAAATCTTTCATTTTT TCCTCTTTTAAACACACACACGCGCTCTCTTTCTCCCTCTGTCTTTCATT CTCTAACAATAATTTCTTAACTACACTTACCTCGCCACCTTTTGTAATTT CACAGCATTCGCTTCTTGTGCTGTAAAAGAACCTCTTTTCATTATTGATC AGCTGCTCTTTGAATTGAGATTTGATAAATTGCTGAAGTCTTGTCTTGTT CGCCTTGTTTTTGAAAAATTTCTGGAGCTCATTTTTCAGAGGAAGGTTCT TCGAAGCCGAGATGAAAACATTTGGTGCTTCTCCTCCTATGAAATTTTTC CTTTTATCATGCTCTCCATCTTTGGTATTGATGATATCTGAGCCATAATA ATCGTTCACGCAAATTATTGTTCTGGCGTTCGGATGTCGCAAATTGATTA AGTTAAAGATTCTTTTCGNCTCTCCATCTTTGGTATTGATGATATCTGAG CCATAATAATCGTTCACGCAAATTATTGTTCTGGCGTTCGGATGTCGCAA ATTGATTAAGTTAAAGAATCTTTTCGCGTAGTCAGACCTAGAAAAAGAAA CCTAAGGTGAAACTGGGTGAAACAGATTATTTTTTTTTTGTACTATGGTT AGTAAATGAGAGAAAACAAGTAGTGAGATACTATACTGTAAAAAAACATT TACCATGTGTATACAGCACCATCACCTTTATCTCGTTCATCGTTATTAGG AATAGCTAGCCTCCAAATGAATCCCATGTCTATGATGGCGGTGTAATAAG TGGGTTTTATTTCGACAAACTTCAACATGTCAACTAATTTGGATTTTTGG CATTTGCGTATGGTACCATTGACGTTGAATATTGGTAGACAATGATCGGT TATACGGTGGTCAAAGATACTATCAAGTGCTCCATCTTGCTCTTGCTCAA TTAAATCAAGTNTGATTTTTGACATTTGCGTATGGTACCATTGACGTTGA ATATTGGTAGACAATGATCGGTTATACGGTGGTCAAAGATACTATCAAGT GCTCATCTTGCTCTTGCTCAATTAAATCAAGTACAGCTGCTGTTGCCTTG AAAGCCATGTCTTCTTCTGACTTGCTCTCACTGAAACGAAAATGAAAGAA TAAAAATTTTTTTTTGAATATTACTTCTATTCATGTCTCATCTGCATAGC TTTTCCTATACAATTTTAACTGAACTTTTAAAGAAAAATATTCCTAAACT TGTACCTTTTGAATGAGGCGATATTAGCAAAGGTTTTTCGTTTATTTCTT TGTAGCCTATCGTGGATAGATTTTACTTTTGAAAACAGACGTTCTTTGAA GTAATTTTGGACGATTTTGTTACCATCATCGTGAGCTTTCTCTAGATCTT TGACGAGTTCACCAGACGCTAATTCACCAGATTGAATACATCGTAATTTC TGGGAATCCTGAAACGGATTACTTTCCCATTCATTCAGTGACGAAATCAC CGAATTGACAGCATTATTGTCCTTTGAGAGCCGTGACGGAACATTTTCTT TATGAACAGTACACTCCGACCTGTAATATAAAATAGTTTTTACTGTCCTT ACTTACTGTCTTAAGAAACTTAGATAAAAGGAAATTTAGATCCTTGAATC GCTAAATTGAATAATTCAAGAACATATTATTACGCTTCATTTTTGCAAAT GAACTCTTCAATGTATGGCGCACTATGTTTACTTTGTTAGTGTTGCGCAT ATGGACCAACAAGCCTTTCTCGCTTTTCAGTAAACGTTTCCATCCAGATT TTAATTTGGAGCCCTTATTCATTGTCATCTCGATCCACATATCAGGAGGA AGCGCTGAATAAGGGTGATCGGTCATCGACTGGGCGAATATCTCCTCCAT CATGTCGGCCTGATTTTTGGGGAGCTTTATCATCTCTAACCAAAACACCT AAAACGAGAANTAGACGTTTAAAAGAAGCAATGCCATTGCAATACAATTT TGAGTAAAGCTACCTTATCTGGGCGAGAGACAATTAAGAATTTCTCTGTT TTGACGTCAATTCTTTTCAAGCAGATAATTTACCTATCCTCACAAATAGA NTCAAAAACAGAAAGGAAGGAGCTATTCGAGCATCGTAATATTGATGTCC CGGACGCATGCTTGTTAGAGTGTTGTTGTTGTTGAAAAAGAGATTTAAAC CTTACCGGAAGCCATCTTCCATAGTTGGAGTTGTCGTAAATATGCATCCT TCTTGTGTCTCGTGGTTCACAGTTGTATTTCTTTATTCTTCTACGACGAA CTGGTGGTGGCTCTTCATTTTGTTTATTTTGCAAGTTTTCTAGTCTGCGG CTTGCTTTTTCAAACGACTTTCTGTTCATCAAAGACAACTTGCAGTNAAA TTTTGCCAGGCTTTAGCAGCGGACCCCCCTCGCGAAAATGTCTTCAAATA CATCCAACTTTTGAATGGAATTCATGTGGTTGCGTCCTAAAAAAGTTGTC GCGGATCCTAAGGTTTGGTCCTCTACTAATAATAAAATGCACATTAACTA AACGGTCGAGTGCAAAAACAATCATTTTGAAATGAATTCACTAAAAGCTA TTTAATCTTATTGACAGCATGAAATTGAAATATAGACATGTAACGCAATT GTAAAAACGTACGCAGATAAATAAATTCCAATTGAGCTTCTTTCGTCAAT TTTGACCCGAAAATTCATGACTTTCAAAATCAGGCAGCACTGAACCGCTA TCTGGCAGACCTTTTACCTCCAGTCCCCCTCTCCCTCCCTTCCGATAAAG CTGAACGTTAAGTTGTTGTTAACGATATGCGCTGGAAAAGCATTATTTTT TTTGAGGTAAAAATTTCTCTTTACGTCTGTTCGCAGCTGACACACAGCGT TGTTTCAACGTTCATCTTACGTTAAATGGACGTTGTGAACATTAAATTGA CGCTGAAACAACGTTGTGTGCCAGCTGGGTTATCATTATAACCATTCTTA TTGTCATAACTATACTAAAAACAATATAATCCAAAAGGCTTGACGTCCTC TTGTCAACACAATATCTGTCAAATCTGTTTCATAAAAAGATAAGGCAGCT TATGCAGCTTATGACATCCCTCTTTTGTAAATATACCAGCTCTCTCCCTC TTTGGACCTGAAAAAAACCTTTCTAGAAAACCTGATGACGATGATGACCC GTTTGTAAAATGCATCCAAAGGCCTATTACGCATTTCACGTGCTTTAATA TAACAATAGCGTTCAGTTTGAGGTCGTTGTTGTTATTTTCTGCCCGCGCA GTTTGATTATTAGCCCAAGAGTGTCATTTGGGTCGTTATCGCCCTATAAC CAAGGCGGTTAATGATATTTCAGCCCTCTGAAGCCTAGTGCTTTAGTTTC CTCAGCGCGGGTATGACAATTTGAGTCACAAAACCTTTCAATACCGCCCA CCGTTCGAATCTTTAATGGCTTACTTAATGACCGCTATATGGATAATAAT ATCTTTTTGAAAGATTTTGACCATATTGCGAGGGCAATGCACATTAATTT TACTTTAAAAGTTTTCCGAAGGTTCTCCTGTTTAATAAAATGACAACGAG TCCTCTTCATCTGAGCTTCTGACCGAAATAAAAAAGTTACGTAAAGGAAT ATTACAGGATCTCTAAAATTTGAAACTTTATATCAATATTATTTTGTATC TTTCAGAGTGCTTCAGAATGGTGGTTCATCATTATCGCATCCGCACAAAT CCCATCAGTCATCACATGTCTTATATGGGGACCCCTCAGCGACGCAATCG GCCGAAGAGCATCAATCTACGTCGTACCTAGCGTCAGTTTAATTCAGAAC TTGGTATTTGTCGGCTGTGCATATTTTGCTACTTCACATATGGGATTTGT CGTCCTTGGATTCTGTCTTTCGACATTGTTTGGACAATTCCCTGGTGTAA TTTCATTATGTTATGGATTCATCACAGAAGTCACTGCAGATAACAAGGAA GCTAGGATCGCTCGCCTCGCTTTCGTAGATGCTTCTATTTTCTTCGCTGG CGTCTTGTCTGGATTAGGCGCTGGTCAACTGTTAGAGAGACTAGGTTTCG TAGCTGTCTTCATCTTCAGTATAACCATCAACACCTTTCTCCTGCTCTAC ATCACGTTCTTGTTACCTGACTTAAAGAAACTGCGACAAAAAGAAGCAAT GAAATCAACAGAAGAAGAGGCAGAAGAACTTCAAGCAATCAACGCAAAAG CTAAAGAAGCCGGGGAAGAAAACGCAGACGAAACTTCATCTTCAACATCT GAGGACTCCAAAGGAAGTCCACAAAAATTCTGTTTATCCCTCTTAAACCC GTACACGCAAATCAAACAAGTCTTCAGAGTCATTTTCGCTAAAGATACAC GACGCATGGTCTTGCCGCCGCTGCTTGCTTTCACGTTCAGCATTTACGCT TATGTTGGTGATTTAACATCAACGGCCCTTTATTTGAAAGGACCACCCTT CCTGATGACTGCAGACTATATTGGATATTATTACGCCATCCAAGCCTGTC TTCGTGGTATCGGAGTCATCAGTGTTACACAGATCTCACACCGTTTTCTT CACTTATCAGACATGAATCTCATGCTTTTCGGGATCGCATCAGAAGCTAT CACTTACACCGCTATTGGGTTATCAAAGACCAGGACCCAGGTCTATTGCG TCAACATTATCGGTCTCGGTTTACCAGTCGCTAATGCTCTTTTAAGAGGC TACACAACCAAACAAGTTGCCCCTGAAAATTATGGCGCTCTCCTAGCTGC ATTCGCTTCACTTGATTGTTTAGCTTACACTACAAATGCGATTACGTTGG AAATCTATAGAGCAACATTGGACAGTTACCCAGGCGCTATGTTTGTTTTC CTGGGCGCATGCGCTGGAGTAGCCTTCTTGATTATGTTCATTTTCAAGTT TTATATTCGACGCTTTCCAGCTAAAACGCCTGAAGCACTGATGGAGAAAA GTGAGCTTAAGAGTGATCTGTAAATTTGAAAACATTCATCAGAGCTACTT TGTATAGCTTGATTTTCCAATCAAAATGTGTTTGGTCAAATACACTTCTG GGCTAGGCTACTGTGCATTTTCGCATTGTAATGTCTTTGGAGCGTTGACA GCAACCACGAACAAACTTTCAAATTTTATACAACTGGACTGTCGTTTTTT TTATTAGTTTATTTTTGGTAAAATACTAGTTAACTTTTATAGCAACCTCG CTCCCTCTGTGTACAATCAGCTTTTTGATGCTTAAAGCGCCACTGTCGTC CATAAGTAACGTAAAAAAGCCTGGGATACACGGGGGACGAGGTCACATTT ATATATGTAGGGCCGAGAACTGCCTGATACAAAAATATGAATTTTACGCT TTTAGCCTATACACGTTTTTTTATAAGAGCATCCAAAATAAGCCAATAAG TTTTAATGAAATCTTGACGCGGTGAAAAATCTGTCTGCTTGAATCTTGTT ACCGAAAACTACAGTCAGCTTTTACTTCTTTTTGAAATAAGGACCAAGTA ACTCAATATGTAGACAGAGCCTTTTTCTGAAGTGATAAAATAACTGGCTT TGAACGAATGACCCAGAGGATAGTTCCTGTCGTAGTGGTCACCGAAGGGC GGGGTTGATCCGGAAAAATTGTCCTAGAATTTCCAAAAATTTAGGTTTTT AAAACCATTGACTAGATTTAGTTATGTTTTGTATAAGTGGAAAATAGCAT TATAAACATATTCGACACCAAATATTTTTTTATCATTTTTAACAGTTTTA ACACTCTCGATAATTTGGTTTTATTTGACGAAAAAAGATAGAAATGTGAC GATATTTACCATTCAATATTTTCAAAGTGTACAACTTTCCTTTCCTTCCC TCCTCTAAGGTTATTTTCATTGACACCCTTCCGCCAGTAGCGTGGTGGTA GGGGGTAGTGTCCCCCAGCAGCGGTTTTATTGAGGGGGCGCAAAAAGGCT CTTCAAAACACTGAGTTCGGCCCTTTTTACCTCAGAAATGGCAGTTTTTA GCCCTATAAAATGGAGAGATGTCGAAGAATTTTCGCGTTAGCTTTTTACA ATTTTCCTAGTN

Coding sequence (CDS) from alignment at scaffold_327:235439..248600-

>TCONS_00059433 ID=TCONS_00059433|Name=TCONS_00059433|organism=Clytia hemisphaerica|type=CDS|length=2982bp|location=Sequence derived from alignment at scaffold_327:235439..248600- (Clytia hemisphaerica)
AGTGCTTCAGAATGGTGGTTCATCATTATCGCATCCGCACAAATCCCATC
AGTCATCACATGTCTTATATGGGGACCCCTCAGCGACGCAATCGGCCGAA
GAGCATCAATCTACGTCGTACCTAGCGTCAGTTTAATTCAGAACTTGGTA
TTTGTCGGCTGTGCATATTTTGCTACTTCACATATGGGATTTGTCGTCCT
TGGATTCTGTCTTTCGACATTGTTTGGACAATTCCCTGGTGTAATTTCAT
TATGTTATGGATTCATCACAGAAGTCACTGCAGATAACAAGGAAGCTAGG
ATCGCTCGCCTCGCTTTCGTAGATGCTTCTATTTTCTTCGCTGGCGTCTT
GTCTGGATTAGGCGCTGGTCAACTGTTAGAGAGACTAGGTTTCGTAGCTG
TCTTCATCTTCAGTATAACCATCAACACCTTTCTCCTGCTCTACATCACG
TTCTTGTTACCTGACTTAAAGAAACTGCGACAAAAAGAAGCAATGAAATC
AACAGAAGAAGAGGCAGAAGAACTTCAAGCAATCAACGCAAAAGCTAAAG
AAGCCGGGGAAGAAAACGCAGACGAAACTTCATCTTCAACATCTGAGGAC
TCCAAAGGAAGTCCACAAAAATTCTGTTTATCCCTCTTAAACCCGTACAC
GCAAATCAAACAAGTCTTCAGAGTCATTTTCGCTAAAGATACACGACGCA
TGGTCTTGCCGCCGCTGCTTGCTTTCACGTTCAGCATTTACGCTTATGTT
GGTGATTTAACATCAACGGCCCTTTATTTGAAAGGACCACCCTTCCTGAT
GACTGCAGACTATATTGGATATTATTACGCCATCCAAGCCTGTCTTCGTG
GTATCGGAGTCATCAGTGTTACACAGATCTCACACCGTTTTCTTCACTTA
TCAGACATGAATCTCATGCTTTTCGGGATCGCATCAGAAGCTATCACTTA
CACCGCTATTGGGTTATCAAAGACCAGGACCCAGGTCTATTGCGTCAACA
TTATCGGTCTCGGTTTACCAGTCGCTAATGCTCTTTTAAGAGGCTACACA
ACCAAACAAGTTGCCCCTGAAAATTATGGCGCTCTCCTAGCTGCATTCGC
TTCACTTGATTGTTTAGCTTACACTACAAATGCGATTACGTTGGAAATCT
ATAGAGCAACATTGGACAGTTACCCAGGCGCTATGTTTGTTTTCCTGGGC
GCATGCGCTGGAGTAGCCTTCTTGATTATGTTCATTTTCAAGTTTTATAT
TCGACGCTTTCCAGCTAAAACGCCTGAAGCACTGATGGAGAAAAGTGAGC
TTAAGAGTGATCTGTAAATGTTTCGACCAACAAGTGAACCCATTATTTTC
TTATACGCAACAATTTATATGATCAATTTGTCGATCCTGCCACAATTCGT
TTTACAGAAATTATGTCTACAAAAACATAACGGGAATGCTTCGTCATGCA
GTGTCAGTGAAGTCGAAGAAGTAGACCAGGAGCTTCAAAAGAGTGCTTCA
GAATGGTGGTTCATCATTATCGCATCCGCACAAATCCCATCAGTCATCAC
ATGTCTTATATGGGGACCCCTCAGCGACGCAATCGGCCGAAGAGCATCAA
TCTACGTCGTACCTAGCGTCAGTTTAATTCAGAACTTGGTATTTGTCGGC
TGTGCATATTTTGCTACTTCACATATGGGATTTGTCGTCCTTGGATTCTG
TCTTTCGACATTGTTTGGACAATTCCCTGGTGTAATTTCATTATGTTATG
GATTCATCACAGAAGTCACTGCAGATAACAAGGAAGCTAGGATCGCTCGC
CTCGCTTTCGTAGATGCTTCTATTTTCTTCGCTGGCGTCTTGTCTGGATT
AGGCGCTGGTCAACTGTTAGAGAGACTAGGTTTCGTAGCTGTCTTCATCT
TCAGTATAACCATCAACACCTTTCTCCTGCTCTACATCACGTTCTTGTTA
CCTGACTTAAAGAAACTGCGACAAAAAGAAGCAATGAAATCAACAGAAGA
AGAGGCAGAAGAACTTCAAGCAATCAACGCAAAAGCTAAAGAAGCCGGGG
AAGAAAACGCAGACGAAACTTCATCTTCAACATCTGAGGACTCCAAAGGA
AGTCCACAAAAATTCTGTTTATCCCTCTTAAACCCGTACACGCAAATCAA
ACAAGTCTTCAGAGTCATTTTCGCTAAAGATACACGACGCATGGTCTTGC
CGCCGCTGCTTGCTTTCACGTTCAGCATTTACGCTTATGTTGGTGATTTA
ACATCAACGGCCCTTTATTTGAAAGGACCACCCTTCCTGATGACTGCAGA
CTATATTGGATATTATTACGCCATCCAAGCCTGTCTTCGTGGTATCGGAG
TCATCAGTGTTACACAGATCTCACACCGTTTTCTTCACTTATCAGACATG
AATCTCATGCTTTTCGGGATCGCATCAGAAGCTATCACTTACACCGCTAT
TGGGTTATCAAAGACCAGGACCCAGGTCTATTGCGTCAACATTATCGGTC
TCGGTTTACCAGTCGCTAATGCTCTTTTAAGAGGCTACACAACCAAACAA
GTTGCCCCTGAAAATTATGGCGCTCTCCTAGCTGCATTCGCTTCACTTGA
TTGTTTAGCTTACACTACAAATGCGATTACGTTGGAAATCTATAGAGCAA
CATTGGACAGTTACCCAGGCGCTATGTTTGTTTTCCTGGGCGCATGCGCT
GGAGTAGCCTTCTTGATTATGTTCATTTTCAAGTTTTATATTCGACGCTT
TCCAGCTAAAACGCCTGAAGCACTGATGGAGAAAAGTGAGCTTAAGAGTG
ATCTGTAAATGTTTCGACCAACAAGTGAACCCATTATTTTCTTATACGCA
ACAATTTATATGATCAATTTGTCGATCCTGCCACAATTCGTTTTACAGAA
ATTATGTCTACAAAAACATAACGGGAATGCTTCGTCATGCAGTGTCAGTG
AAGTCGAAGAAGTAGACCAGGAGCTTCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037411XLOC_037411Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059433-proteinTCONS_00059433-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059433-exon-scaffold_327-1575043694:247739..248600TCONS_00059433-exon-scaffold_327-1575043694:247739..248600Clytia hemisphaericaexon
TCONS_00059433-exon-scaffold_327-1575043694:235439..237844TCONS_00059433-exon-scaffold_327-1575043694:235439..237844Clytia hemisphaericaexon
TCONS_00059433-exon-scaffold_327-1510915933:247739..248600TCONS_00059433-exon-scaffold_327-1510915933:247739..248600Clytia hemisphaericaexon
TCONS_00059433-exon-scaffold_327-1510915933:235439..237844TCONS_00059433-exon-scaffold_327-1510915933:235439..237844Clytia hemisphaericaexon
TCONS_00059433-exon-scaffold_327-1491911889:247739..248600TCONS_00059433-exon-scaffold_327-1491911889:247739..248600Clytia hemisphaericaexon
TCONS_00059433-exon-scaffold_327-1491911889:235439..237844TCONS_00059433-exon-scaffold_327-1491911889:235439..237844Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_327supercontigscaffold_327:235439..248600 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (4.59932 tpm) - - (1437 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.96128 5.19115 4.77992 4.59932 65.5173 47.0143 72.7798 80.1825 112.373 82.416 132.694 211.261 492.574 445.626 247.448 240.107 189.06 282.778 203.634 201.942 518.733 548.899 167.819 229.812 157.805 166.109 749.886 1437 117.36 102.548
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059433 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50010001500200025003000Sequence
Match NameE-valueIdentityDescription
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