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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059475 ID=TCONS_00059475|Name=TCONS_00059475|organism=Clytia hemisphaerica|type=transcript|length=1050bp
tgatggcgtaagccgaaaagctttttattcaatttttcaaatatatttta
cattCACAACTTAACATGGCGAAAATTCACTTAATTTTGAAGCAATGTGG
TACTTCTACATGAACCCAATTCAAACAGTCTTTGGACCGAATTTGTTTTC
CTAGCTATTTTCCACTTTTTCTGTTTTGAGGCCTAATTTCCATTCAAAAT
TACTCCGTTTAGCCGTATTTTTAAAGGGAATAATATACTTGCGTTTTTTA
GAGAATATTCatttcctgtatttttgaaggaaaatgggtttttattatGC
TATAAGAAAGAGCTATTTctcatttcttttttatatccaGACGAGtcatt
gttcttttttttcaagagtTAATCCTAGGTAATATATTCTTGACTGTTTC
TCCCCGTCTAAAAATCTCGATCCCGTGTCTCTAAAACCAAAGtgtttaag
aaataaaaaaagagcCATAGATAATCACCCTAGAAACAAGTtcccaaaat
ttcagcaaaatacGATCAATTTTGAAGTCCTCAGGCTGGCTCTTAGTTTT
AGCCTCTCTTTATGAAAAAGGGGAAGGGGTGTCAACCAAcacttttgaat
taaaaattgctgaaattttgctcCAAGATTGAGAACAACAagatagaaaa
ttttaaaaagtccTTGCATTTTCTAATTAAAAATGACCTAATCAAGATAG
TTTTTAAGACCAaatttgtttcaatattttttttattttcaataagtttg
caTTTGTAAACTGATGTTGCTGTAGGAAAGTACTATTAAATTTGATAGTA
TTCATTTTTCGTTACTAAATGCTGTTAGTATAAGATTTTGAGGTACATTT
TCTTGCTCACAATAAATCTCTGAATTCGTTAAACTAAATGCACAGAACAA
TTATATTTATTGAAACTTTGTGGATGGTAAAATAATTTGAAGATCTTCCT
TTAGCCTTTTTCTCCGGAAGCCTAGAATTCTCTTCTTATTATTTGCCTTT
CAGCGAGAAAGGAGAGCGGAAGAATTTATTTAACATAATCGATTTTGTTC Run BLAST on NCBI transcript from alignment at scaffold_327:359864..360913 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059475 ID=TCONS_00059475|Name=TCONS_00059475|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at scaffold_327:359864..360913 (Clytia hemisphaerica)
GAACAAAATCGATTATGTTAAATAAATTCTTCCGCTCTCCTTTCTCGCTG
AAAGGCAAATAATAAGAAGAGAATTCTAGGCTTCCGGAGAAAAAGGCTAA
AGGAAGATCTTCAAATTATTTTACCATCCACAAAGTTTCAATAAATATAA
TTGTTCTGTGCATTTAGTTTAACGAATTCAGAGATTTATTGTGAGCAAGA
AAATGTACCTCAAAATCTTATACTAACAGCATTTAGTAACGAAAAATGAA
TACTATCAAATTTAATAGTACTTTCCTACAGCAACATCAGTTTACAAAtg
caaacttattgaaaataaaaaaaatattgaaacaaattTGGTCTTAAAAA
CTATCTTGATTAGGTCATTTTTAATTAGAAAATGCAAggactttttaaaa
ttttctatctTGTTGTTCTCAATCTTGgagcaaaatttcagcaattttta
attcaaaagtgTTGGTTGACACCCCTTCCCCTTTTTCATAAAGAGAGGCT
AAAACTAAGAGCCAGCCTGAGGACTTCAAAATTGATCgtattttgctgaa
attttgggaACTTGTTTCTAGGGTGATTATCTATGgctctttttttattt
cttaaacaCTTTGGTTTTAGAGACACGGGATCGAGATTTTTAGACGGGGA
GAAACAGTCAAGAATATATTACCTAGGATTAactcttgaaaaaaaagaac
aatgaCTCGTCtggatataaaaaagaaatgagAAATAGCTCTTTCTTATA
GCataataaaaacccattttccttcaaaaatacaggaaatGAATATTCTC
TAAAAAACGCAAGTATATTATTCCCTTTAAAAATACGGCTAAACGGAGTA
ATTTTGAATGGAAATTAGGCCTCAAAACAGAAAAAGTGGAAAATAGCTAG
GAAAACAAATTCGGTCCAAAGACTGTTTGAATTGGGTTCATGTAGAAGTA
CCACATTGCTTCAAAATTAAGTGAATTTTCGCCATGTTAAGTTGTGaatg
taaaatatatttgaaaaattgaataaaaagcttttcggcttacgccatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059475-exon-scaffold_327-1491911889:359864..360913 | TCONS_00059475-exon-scaffold_327-1491911889:359864..360913 | Clytia hemisphaerica | exon |
| TCONS_00059475-exon-scaffold_327-1510915933:359864..360913 | TCONS_00059475-exon-scaffold_327-1510915933:359864..360913 | Clytia hemisphaerica | exon |
| TCONS_00059475-exon-scaffold_327-1575043694:359864..360913 | TCONS_00059475-exon-scaffold_327-1575043694:359864..360913 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_327 | supercontig | scaffold_327:359864..360913 . |
Blast
The following BLAST results are available for this feature:
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