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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059510 ID=TCONS_00059510|Name=TCONS_00059510|organism=Clytia hemisphaerica|type=transcript|length=1308bp
CTTCAGGGCGTTACGGAAAGAAttcaaaagcaaaattggtATACGTGCTA
CGGTCAAATAACATGTACCCTAAATCATAAAAGGTCCGTACTGACTGAAA
ACCTGACCTGACGGAAAGCATTCGCAAAAAGACTTCGTAAGACAACATCA
AGTCAAGCAAAGGTATTCCACAAGCTTATCTAAATAATTCAATTACATCT
TAACTTGCTAAACAGTTAAAgATTTTTTAAGATGTATCCTGCAACTCATC
AATGTGCACCAGGTGCCTGGGAAAAGGAAAAGGTCAAGACATTActgaaa
aaattcgaatttccacGCGAATCAGCAGAAGAATTGATTTCAAAGATGAA
TGAAGACTTTTCGTACGGGCTAAAAAACGGTGGAGATTACCATAGTCCAG
TTAAAATGTTGTTGACTTATGTACATGGTCTTCCAGATGGCACTGAAACA
GGGGACTACTTTGCGCTTGATTTAGGAGGAACCAATTTCCGTGTTTTATT
GGTTAAACTGCACGATGGGAATGTGTCAATGAGTCATGAGACTTTTCCAA
TATCTCAAGAAACTATGAAAGGTGATGCCGATGGTTTGTTTGGATACATT
GCAGAATGTCTTGcaaaatttgccaaactaaAGTTAGGTCAAGAGACAAG
AAAACTTGGAACAGTAGggtttactttttcttttcctgtaCGCCAGGAAA
GTTTGACCTGTGGATCATTGATTAAATGGACTAAAGGTTTTGATGTGGAC
GATGTGGAGGATCATGATGTAGTTGCACTACTTCAGCAAGCAATTGAGAA
ACGCAATGAAATTGAAGTTGAGCAGATTGCGTTATTGAACGATACAACCG
GAGTGATGATGTCTTGTGCTTATAACGATCCTGATGTTATGGTTGGAATG
ATTTTAGGTAAGATGTACCTTTGTACCGTATTTTATATATGACATACcct
aggctgcacacatcccctctgataagttttgatataggggatgcgaatca
ggctcacaaaaccattccgaacttagcaaaaaatctgctaaccaaaaaaa
gagttgaatgatagagaactttgattgacagtttgtcgtcttttgttatc
ttgagagttttgtttgctaattcaattaatttcgataaacaaaaagaaag
agaggagaaagagagatttctagccatatgttctttttatttgaatcttt
atttgatttctatttacgtcatcaaataactcaaacaatacacatcgagt
tttttgaaaaatacaagtcgccaaaattctgcaaaatacatagctattcg
gtaatttt Run BLAST on NCBI transcript from alignment at scaffold_329:275950..288645+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059510 ID=TCONS_00059510|Name=TCONS_00059510|organism=Clytia hemisphaerica|type=transcript|length=12696bp|location=Sequence derived from alignment at scaffold_329:275950..288645+ (Clytia hemisphaerica)
CTTCAGGGCGTTACGGAAAGAAttcaaaagcaaaattggtATACGTGCTA
CGGTCAAATAACATGTACCCTAAATCATAAAAGGTCCGTACTGACTGAAA
ACCTGACCTGACGGAAAGCATTCGCAAAAAGACTTCGTAAGACAACATCA
AGTCAAGCAAAGGTATTCCACAAGCTTATCTAAATAATTCAATTACATCT
TAACTTGCTAAACAGTTAAAggtatatttcttttatttatctGTTAATTC
TAAGGATACTTATGCCAGGTGGTGTCAAGTCATATACCTAGTTTGCACCC
CCTTTCTTCAGTGGTGAGGCtagctggaacttcgatttttgacgaccctg
ccggtgcacccgacagtcgggtgctgtcgggtgttttgtcgggtgctgaa
atttctaaatttgcgaaaacaCCCGACAATTGTGCACCCAACAGTCGGGT
GCTTAAAATTCCTAACTTAGTGAGAACACCCGACACAATCAACACCCGAC
ATCGCCTCTGATGGGCGAAATCGCCACCCGCCCGTTACATGTTGGGTGCT
GTTAAGAGCGCCCAAGATATAGCACCCGACAAAGTGCACCTGACTGTCGG
GTGTTAAAATTTCTAACTTCGAGCACCCGAcaacagcacccgactgtcgg
ggtgcaccggcagggtcgtgatttttgaggattacgattttaccaacttt
ttagcaatttttgcctcgctaactcaaatctcgcaacctctttaccttaa
aggaagatcgaaattagagtttttcagcgttccgaaaaaaacgcaaagca
aaaattttttcatcttcacaggatcgattctcaacaacaaaatacatctt
ttggtctttgagtttgtttctgacgtttttccttcaaagaatatcgatac
TTTCCTTTTCCTCTCGAGTGCGAGAGAAATAAATtattagctcgcattct
cgcgcgggcgaataaagatgaggcggcaatcttgcactgagggtgctact
tagtttccgccctattttgcgcccacaataGAANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtgagcccaaatttaaataactggttaaa
taaaaaacaaatgatatcagttctgtttttcctcaaacccccgggaaaag
ttttttggccGACTTAGCTGTTCTATAAATTTCGGAAAatagaactccca
taggaattctgatacacataacccgattggttcatttcggatatgcttca
agaaagtcataatggcaaatgattttaaaagtttctgctgaggaaatgtg
tggaatttatcgatgttgatagcttgttgattctttaaagaaaaaagata
acaggtatagctttttctaatcctggaatatcgaggttccactCTACACT
gccttttatttttaatcagtttttaccgtcaactgctctaactaaTTGGG
ACTATCTGTAATCTTACAAAACATGGAaaggcaatttggccaccatttca
ccgaacctctaAAGTCATTTGGAgtcaccgagtaggctttttaaaaaatc
gaaatatgaaaaaaaacacccttTCCGCCGCTACACCGGACATCAGATCA
GAGAGTGCTGCGGCAAAAAATGTCCAATGCAAATTTTTCACTCCCAAGTA
AAGTACACCGGACACTACACCGACTTATGTCCGATGATTTTGTTTTCCAG
TTATTTCTGCACCGGACAAAGTCTGGTGTATCTGTAATGTAAGCTCAAAA
TACGCTTtcaaatgtttctaaagaaggcggaatacactataTATGGGTAT
ATGGACTTATTGTCCCATTATAGTAGGTATTCTGCCTTCTTTACTTTAAA
GAAAAACGCTttagaatgtttctaaagaagacGGAATACACATGAATTTA
TTGtcccgccttctttaaaaatactttttacaatgtttctaaagaaggcg
aaaTACAGCTATGTATGGATTTATTGTCCCAGTACTGTATAGTATTccac
cttctttaaaaaaatactttttacaTCGTTTCTAACGAAGCTGGGACAAT
AATAATTTCGGACCAGAATTAATATGGTTAAGTATTATATCTCTGTAGTT
AGTTATTTACAAACACAGACAATTATTTCCAGAATTGTAACTCGGCATAG
TATACTTTTCCAGACGTGTTACAATGAGGTTGAAATTGGGTTACGGAAAA
CTAGAATGGCCCTGAAACTGATAATGGCGTTCTGAGCGTTACAACCTTTT
ATATAGAAGAGAAGAAAATCTAACCCAAAGAAAACCCAAAAAACCAAGCC
ATGAATGATTTTTGGTTTTAAGTATAACATCGATAAAAGTCCTTTGTCTG
AAAAGTTGAATCCCACTCGGGACTCAAGTTAAATTAGGCCAAAAGTTATA
AAATTATAGTTgatgcaggtagattagtctgatacAGAATGTTTGAAACA
GTCTGTCTGTGAACCTTGTTGCCAGACTTTCTAAACTTTGGAAATGAAAC
TCAGGCAGATATGCaaaatcaacttaccataattAAACACTTTTAAACCC
TAAAAAgctctagaaactttcaaaaaaactactactaaaaactactaaaa
accacactaaagcatcagccacatgtatttaaaCTTCTAGccaagagcca
tttttttataaatgaatctatgtttttattttcatttgtttttccttttt
ttctgccAAGTTAGCTTTTCCATTAATTATGCAGCGCAtagaattatcaa
aatgcgcgcatcgaaattatcaaaatgcgcgcatcgaaattatcaaaatg
cgcgcgagagtactgctaagtaatacgccgaaatcTGGCCAATCAGACTG
AActtgcattgcagggaaaaatctccctgcgcAGGCGAGtcacctgcgcc
aagcgttaaacaggCAGCAAAAATATTATTAGGGGGgatgttattttgca
aaaatggcataaattcttagcccatttgtcaaaagttgcctttgggtata
aaaagaagaaaaaattatgttaaaacCCTGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAaccttgaaaaaagttccacagggtttttacatgaatttttcttc
tttttatacccaatggcaacttttgacaaatgggcttaaaaaattagtCC
TAACATCTCCCCCTAATATTATAAACTAGACTGAAGAAAGTtttaacgct
tggatttccAGACTAGGAAATCCTCTTACTTAACTGCACGCTTAACTTCC
AAGATTTAAACGTGTAATTACACGGCTATCAAAATTGTAGAATATACATG
CTTATCACTATTTGAATGGGTGCGAAGCATGCAATTGGCTTCCTTAACTA
GTCTACTATTCAAAGAAACTTTATTTGCTTCCGTCGTTTCTTTGAAATCG
GAATGGCttggaaatctttttttgaaaaaagaagacattgaaaTTAAATC
TTTGaagatttttatcttttcctgGCCAAAGTTAGGTGTCAAACCTTCTC
CATGTCAACCCAACCATATTGGACCAATTTCAGTCTGGCACATCCTTACA
GTTTGCATGAAAAACCTTGTAAATACACGTACAAGGTTTTACATGACATA
CCAAGTGTAAATTCGGTAGGGTACAGGTATATGGACCCCAAAAACCATGG
TACCCCAAAAGCAGCACAGTCGCCTACATAAAAAAATCAGAGGTTATAGA
GCATTAGGATAAAAACATTCCTATTTTGGAGAGCCCTGATATTATAGGGT
TGTGTTTAATAACAATTTAttcagaaatattttcattttaggaaATTACA
GGCCTGTTCATAAAAAAAGTATAgtccaaatatttcaaaattttaacact
AGGGTCACTGGATTCATAAATCAGGAAACCAAGTTTGCAAACCTAGGATA
AAAATCAGCCATCAAGGTATATATTTTCAATTGTTAAAGTTTGCTTGCAA
AGAATTCCTTGTGAATCTCACAATTTTGGCATAAAAATGGGCCTATCACA
GTGTGGGTTTTGGGGTACACCCAGATTAtgaaaatgagatgaaatataaC
AAAAATGGAACAAACACTAGATGTAGAACAGATATCAAATATGTCTGGAA
GGTGCTGAGGGGTATTTTCAAGAGTTGTGCTTTGGTCTATTTTAGGTTTC
AAACATCAAATTTCTACTTCATCAACATCACTCTCTTCTTCAATCAAAAA
CCTTCTACAAATTTTGCCTACAAAAAGTGATGTCTTACGTTTGGTCTAGA
AACAAACAGCATACCATTTGCCAATGATATCTACttttcagttagtcaca
ctagcaacccgccgaaatgcgtatcaaagattaatgctgcgaaagcgctc
tatcgtttacctgactctcaagcaaaaaaaatgcgctgtaaaacttctaa
agggattcatgaaaaaataacccggcactttttaatgaaattaacatttt
caaaaactatgagaaattgcctaaattTGAGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtttgagccaagccaaccttgagaactaatttgaagatcaactt
cccaagaaaaagatctacgggggagacggaatccacctagatccgcgcac
tgccagATAGGCTACTGtatttcccagaaattttgccggacctaaaacac
tgacccatttacatgtgcggaattgtttttacttgagcgtataaacaagg
ctttaaaaatcgaagcgctttctcgggaattgaatgacaaagaGGCTTGA
TGTTCTTCCAAACATTCTGCATATTGGAAATAGCCTGCTCCTCGGGGTCA
CTGTTTTCCTTGTCTTCAATTCTTTCATCTGTTCCATATGTTTGTTTATA
TGTTTCATCATTTTCTGACTCATCTCTTTCTTCGGACATCTTTCATCACT
ATCATCAAACAACCTTTTTGATGAACTGTGATTTAGCTGGAAAGATCATC
ACcggtttttgaccatttacctTGCTTTGCTGCACCTTTTCTTTGATGAC
TTCGACTTGGGAAGCAACATCTTTGGCTCTCATGGATCCATAAACATTTG
TTACCCTAACTGATTTCTTTTCAGTTGCTGGCTTGACTTTCCTCACACTT
AATAAACCTCCTTTAAAGCAATGCTTTTTTCACCAAGTTCCCTTATTAAG
TTTTGTTCCTGTTCAAACTCATCCTTCCAATATTCagccaaattattttt
ttcattggaTGATACAATCAAGCCAGGAGATGCTTCAGcaagttctagtt
ctagttctactAATAATAGATTATACGCTAACATACATTATCATGATATA
GGTTTGAATAGCAAGGTTTGAATTTGACGAACTAGCTGATGAACCAGCCT
CCTCATTTAACAGGTTACTTGCTCTTTCAAATTTGTCCTCTTGCATGTAA
CTCAACAACATTTAATGCTGTTGCAGTGACTCTGACACGCTTTGAGCATT
CCACAAGGGTTTCCAAAGGTGCCCATTTATTCCAGATCCTTGATAAAATC
AGCATGAAGGACTCTATAGGTGGAGGTTTTTGTTTAGCTGATCCAACAAT
TGACGTTAATTGTTCCACGATCTTTAGTCAAAGGATAGTTCCCAGTGTTC
AAAGCAGCCTGACCTGCTCTCACCCCATTTTCAATGCAAAACTGGACTGC
CTCCtctatttgcttgtttttcaaGTTTGTCTTTTTTCTAGTTACATTTG
CTTCATCCCTTGTTGATTGCTTTTTCACTCTTAAGCTAAACTTTGGTTTC
ATTGTGATGTCtatctttttaaatattattttgactaaaaaagaaACTGT
AAACTTGAGATAACTCAAAATAGATCAAGAAAACTATCTAAAAAGGAATA
aacgtagtggtctaaagaaacggctattcttttttagaatcaaccttaca
atctagtttttatatttataaaaactagattgctgacgtgtgaaaaggaa
tgtcggcgtgaatgatccttttgtttcgataataacatcaaagcgggaac
taattttcttctcgtttctttcTTTCCTTTTTCTTTCTCATAACTTCAAG
CTTTCCCTCAGACTCTCCCAAGCATGGTTAGCTCAAGTGGTTAGAGCATC
TGTCTCATCAgcatgggtttccgagttcgatccctctgggtgtcaaattt
ttcaattcttcaaatttcttattttaattctctttctattaAAATAAAGG
TCAATCAAAGAAGTAACTAGCATATTATTACCTCCGCTCTTTGtgtaagg
tttagataagctatgatagcatcacttaataagaacttttttaagttttt
tttttcttcaatcttttttttaccacaagcgattattcaaggctgagata
tagaagaacgggtataggcgtttgcgcctgcgtttggtgactggcagttt
cagtttcagtttcactactttcactttcactttcactttcagccagcgag
tgagcgagcatggtaattgatttccgggtcaaaatatttgacacttgatc
caatcgtttgtttatctttcttgcgtggtcgtcatttgaatttcagtatt
caatgcTTATANNNNNNNNNNNNNNNNCATTCCTtttcacacgtcagcaa
tctagtttttataaatataaaaactagattgtaaggttgattctaaaaaa
gaatagtcgtttctttagaccactacgttTAAAGtattagtcaggtagaa
ttaggtcACAAACCACCAAAACCAGGACAAAAATGGTgcagagatgaaat
tttgcacataggTCCAGGAATAATAACGAGATATAAtgattttaaaatag
aaaaaaagtgcTGATTCTGCAAAAATAGGCGTTCTAACGATTTTTATAAT
CGTTATATCTCGCCAACGGCTGATATAAACATAttgaacaatatattttt
ctgaaagcccGTGATCAGGGCTCCATGATGAGCATGTCGTTGTTCCAATT
TATTGCTcttacaaaaaatgctgacgtcatcaaaatcgtcaTATCTTGGG
ACCAcgtggtccaaatttcaaaagtgaccccatttttttcatctactGAT
CAAGAGGGTGTTCCCTgtctagttatttttgacatttgaaaatcattaaa
aatcagttatccttgattaattgtagaaaaaagtaccatgctcgccatta
tggatttgagggtgttcccatcttcTTGGGGGTAgggctttttttttggt
gaATCCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTGGGGTAGTTAtgtaattctacctgactatatg
TTCACTGTATTTCGCAAGGAAAgtatttcctttttaaatttcgctGCCTC
TCTGAGTCAAGTCCAGAGTAGGCTTGGGCTAAggcgaatgataaaaaatg
ttttgtttccggaatgcgggtgaaggaaaaaagttatcatgcggccggcc
ggaaaataattttttttgctatttttNGacatttgaaaatcattaaaaat
cagttatcaagggtccccccttaattaattgtagaaaaaagtacaatgct
cgccattatggatttaagGGTGTTGCCATCTTCTTGATGGTAgggctttt
tttttggtgaatcctgacatgttcctggacctctgtgcaatatttcatct
ctacaccattttGTCTGGGTGGGGTAGTTAtgtaattctacctgactata
tgttcactgtatttcgcaaggaaagtatttcttttttaaatttcgctgCC
TCTCTGAGTCAAGTCCAGAGTACGCTTGAGCTgaggtgaatttttttttt
aagtgaataTCTTGCATATAATATAGAAATGGATTCAGAATGGCCCAATC
AGCTGCGATGTTAGTTATTTTCCCTCAAAAATACCAGACAagtaattttc
ctttaaaaatacagaaATCAGATGTtagttattttccttcaaaaatacaa
gactgAGATGAAGAATGAAGGAAGGGAAACTGGTGAATTTCTCCATGATT
ATACCCTAACCCCGCCCCCCCCCTGCGGGGAATTCTACAAAGTTTCAGGC
TATAATTTTTTGGGTGCTGGCAGGCATTATGGATGGAAAGAtccatgtca
aatttcaagctcATACCTTTCCTGGTTAGCTCACAAGTCGGCTATTACAA
GAATACAAACCTATAGTTTATGACAAAAAGTCCCAAAATGTACATGGAAA
CATTGGCTACGTGTATTCTTTTGAGTTTTATCGCTCAAAttattgaaatt
ccaaaaagCTGATGTGGGTTTTGGGGTACACATGATGTGGTTTATGTAGT
ACATTAGGTGGTTACTGAAAGCTTAAGTTTGCAGTTACATTATACATGGC
TAATAAATTAAGTAAGAGGATTAGGTGCAAAAAATCAATGCTCTATGTTG
ATTCCACTGTGCACAGTGGCCATATTTGTGCGTGTGGGTTTTGGGGTACA
TAgggtaaaaatatgaaatcttGTTGAATCTTTGgagaagaaataaaata
aatgatACCTATCAGGAAGAGTTTATATTGACCAAAACTTTGAGTATACA
AACTAACAATATTACACCTTAACCTATTAGAATTTTATAGCCGTCCACTT
TTTACTGCGGTTTTTGGGGTCCTTTATCTTGGTGCTACATGCTAATTTGA
CCTTGTTATATACTTCAAATCAAAAATGGGGAAAACGATAATCAAAATGG
CAAAAGTGAAATGTTTTAGGGCCATTAGCCATAGACTATAAGTGGTGGCT
GAAGCAGATTCtccttaaaaaaaataattttttagatCTAGGAATCACTA
TTTCTAAGCCTAAatgttgatgtttttttaaccaaataatCTGTTATGTT
AATAATCGTAGGATTGTCCCTGCAACAAGTCTTAAAACTGTAAGGTTTGC
CATGTTACTAGATAATGAACTAGATTTTTGAAATCGAAAAGGAAAAGTCC
ACATGATGGGAAATTGAATCTGGACCAATAGTTTGCTATTACAGAGTGTA
AATATCTTGTCTTGATTGTCAATATTTACCTTATTCTCATCTCAGATTTT
TTAAGATGTATCCTGCAACTCATCAATGTGCACCAGGTGCCTGGGAAAAG
GtaaacattatttttcattgctacactatttttcaaaagtagattGATTG
AATTCAAGCTGTCAAGTATTGTGTTGAAATGAATCAATTATCTTTCAGCA
TTATGAATGTCAAGAATGAAAGAGAATTAACTATCAATAAAGAGCAGTCC
TcttaaaaatcgaacaaaataaAGGCTTGACATCGTTTTGATAAAATGTA
ACCAGATTTATTAGCATAAAAAATGTTGTCAACTCTTGTTTAATCTTGCA
TTTTTACTGTGAAATATATTTTGTGAAGAGATACATCACTAATTGACTTG
ACATCATTTCATATCATATTTATTTTAGGAAAAGGTCAAGACATTActga
aaaaattcgaatttccacGCGAATCAGCAGAAGAATTGATTTCAAAGATG
AATGAAGACTTTTCGTACGGGCTAAAAAACGGTGGAGATTACCATAGTCC
AGTTAAAATGTTGTTGACTTATGTACATGGTCTTCCAGATGGCACTGAAA
CAGGGGACTACTTTGCGCTTGATTTAGGAGGAACCAATTTCCGTGTTTTA
TTGGTTAAACTGCACGATGGGAATGTGTCAATGAGTCATGAGACTTTTCC
AATATCTCAAGAAACTATGAAAGGTGATGCCGATGGTTTGTTTGGATACA
TTGCAGAATGTCTTGcaaaatttgccaaactaaAGTTAGGTCAAGAGACA
AGAAAACTTGGAACAGTAGggtttactttttcttttcctgtaCGCCAGGA
AAGTTTGACCTGTGGATCATTGATTAAATGGACTAAAGGTTTTGATGTGG
ACGATGTGGAGGATCATGATGTAGTTGCACTACTTCAGCAAGCAATTGAG
AAACGCAATGTAAGTTTTGGACACtaattcaaaaattattataaaaatat
tttaactcGTTGTAGCTCATATTGTTATTCACCTAAAAGGGCAATAATTC
TTTCTTTCTCGCCAGGAACTAAGCTTGTTTTAGACAAAAAGAATTAGGTA
ATTTTGAGAGAGAGTAATTATATCAAGAACCCGTTTTGGTGAGTTAGCGT
TTtgtcaatacacgttttttttttaagaaacacacctttaagaaacacga
ggctcagaatgcctaaaaactaagaaacatctaagaaacatgctgagtct
gagaatgagaaaataacattttttaattcgtttttttaagaactttccAA
TCCAACCTTCCATGaagctgattatgtcaaaaagtttagaaacatgtaag
aaacatttaaggctcaaagacattgaggctgcttggtaaaactagtttct
taaaaaaaaaaaaaacgtgtatttgcaAGATCTAATTTTGCGGTGAATTT
TTTCAATACTGCCAAATTCACTAAAATCATCCATATCCAACAAATCAAAA
TTGGTTCCCTAAGATTATCCATATCAACAGAACGTCTAGGTTAGTTCAGT
TACTTCAAAGTTGAGTATGACTGTacgtttttcacttttttgtcaAATCT
ACGAAAAGAAATTGTGAANAGTGTacgtttttcacttttttgaaaaatct
ttctaaatTAACGCACAAAAATggtaattttttgttaaatctATGAAAAG
AAATTGTGAATGCTTTGAGAGTCACTTTAAAGACCAAATAAACTTATTCC
AACCGGTCGTTCTtaaatacaaaaagaaaagatattttctagcaaaatta
aacttgtttgttgtttaCACAGGTTTACAAGATGCACTAAtctaaattta
ttcaaaattttttcgggAGCTTCGCCCTCTAAACACCAACCAGACCCCCA
GCTTCATCCAATGGACAGCTTCGCTGACCAAATTCTCTATCAGGCACATT
AGAAACTCGATCTACATTTACAAAAACGGCCGCAGCTCCAAGTGCTTGGA
AAAATCCCTGTCCACAGTGGAGTAAGTATGGTGGTGGTGTGACAAAGGTT
TCCCAAAATGGTATTTATTCATTGCAGTGCAAGGGGAAATTACAATAACA
GGGGCAAGTGTATGATGCCCCGAATTTTCTTTATGTTGTTTACAGGAAAT
TGAAGTTGAGCAGATTGCGTTATTGAACGATACAACCGGAGTGATGATGT
CTTGTGCTTATAACGATCCTGATGTTATGGTTGGAATGATTTTAGGTAAG
ATGTACCTTTGTACCGTATTTTATATATGACATACcctaggctgcacaca
tcccctctgataagttttgatataggggatgcgaatcaggctcacaaaac
cattccgaacttagcaaaaaatctgctaaccaaaaaaagagttgaatgat
agagaactttgattgacagtttgtcgtcttttgttatcttgagagttttg
tttgctaattcaattaatttcgataaacaaaaagaaagagaggagaaaga
gagatttctagccatatgttctttttatttgaatctttatttgatttcta
tttacgtcatcaaataactcaaacaatacacatcgagttttttgaaaaat
acaagtcgccaaaattctgcaaaatacatagctattcggtaatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059510-exon-scaffold_329-1491911889:275950..276170 | TCONS_00059510-exon-scaffold_329-1491911889:275950..276170 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1510915933:275950..276170 | TCONS_00059510-exon-scaffold_329-1510915933:275950..276170 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1575043694:275950..276170 | TCONS_00059510-exon-scaffold_329-1575043694:275950..276170 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1491911889:286045..286099 | TCONS_00059510-exon-scaffold_329-1491911889:286045..286099 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1510915933:286045..286099 | TCONS_00059510-exon-scaffold_329-1510915933:286045..286099 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1575043694:286045..286099 | TCONS_00059510-exon-scaffold_329-1575043694:286045..286099 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1491911889:286428..286958 | TCONS_00059510-exon-scaffold_329-1491911889:286428..286958 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1510915933:286428..286958 | TCONS_00059510-exon-scaffold_329-1510915933:286428..286958 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1575043694:286428..286958 | TCONS_00059510-exon-scaffold_329-1575043694:286428..286958 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1491911889:288145..288645 | TCONS_00059510-exon-scaffold_329-1491911889:288145..288645 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1510915933:288145..288645 | TCONS_00059510-exon-scaffold_329-1510915933:288145..288645 | Clytia hemisphaerica | exon |
| TCONS_00059510-exon-scaffold_329-1575043694:288145..288645 | TCONS_00059510-exon-scaffold_329-1575043694:288145..288645 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:275950..288645 + |
Blast
BLAST of TCONS_00059510 vs. Swiss-Prot (Human)
Match: HKDC1 (Putative hexokinase HKDC1 OS=Homo sapiens GN=HKDC1 PE=1 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 3.600e-49 Identity = 98/215 (45.58%), Postives = 141/215 (65.58%), Query Frame = 1
Query: 271 EKEKVKTLLKKFEFPRESAEELISKMNEDFSYGLKNGGDYHSPVKMLLTYVHGLPDGTETGDYFALDLGGTNFRVLLVKLHDG--NVSMSHETFPISQETMKGDADGLFGYIAECLAKFAKLKLGQETRKLGTVGFTFSFPVRQESLTCGSLIKWTKGFXXXXXXXXXXXALLQQAIEKRNEIEVEQIALLNDTTGVMMSCAYNDPDVMVGMILG 909
+++++ +L F+ RE ++ +KM + YGLK + V+ML TYV GLPDGTE G + ALDLGGTNFRVLLVK+ G +V M ++ F I E M+G + LF +I +C+A F +G + L +GFTFSFP RQ S+ G+LI WTKGF D E DVV +L++AI++RNE +++ +A++NDT G MM+C Y DP+ +G+I G
Sbjct: 466 QRKQIDRVLALFQLTREQLVDVQAKMRAELEYGLKKKSHGLATVRMLPTYVCGLPDGTEKGKFLALDLGGTNFRVLLVKIRSGRRSVRMYNKIFAIPLEIMQGTGEELFDHIVQCIADFLDY-MGLKGASL-PLGFTFSFPCRQMSIDKGTLIGWTKGFKATDCEGEDVVDMLREAIKRRNEFDLDIVAVVNDTVGTMMTCGYEDPNCEIGLIAG 678 HSP 2 Score: 147.517 bits (371), Expect = 8.601e-38 Identity = 83/214 (38.79%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 277 EKVKTLLKKFEFPRESAEELISKMNEDFSYGLKNGGDYHSPVKMLLTYVHGLPDGTETGDYFALDLGGTNFRVLLVKLHD---GNVSMSHETFPISQETMKGDADGLFGYIAECLAKFAKLKLGQETRKLGTVGFTFSFPVRQESLTCGSLIKWTKGFXXXXXXXXXXXALLQQAIEKRNEIEVEQIALLNDTTGVMMSCAYNDPDVMVGMILG 909
+KV L ++ +++ + + GL + + VKML T+V +PDG+E G++ +LDLGG+ FRVL V++ + +V M + +P E ++G+ LF Y+A+CLA F K K + +KL +G TFSFP RQ L G L+ WTK F V+D DVV+ L +A+ + +++V+ +AL+NDT G MM+CAY+DP VG+I+G
Sbjct: 20 KKVDRFLYHMRLSDDTLLDIMRRFRAEMEKGLAKDTNPTAAVKMLPTFVRAIPDGSENGEFLSLDLGGSKFRVLKVQVAEEGKRHVQMESQFYPTPNEIIRGNGTELFEYVADCLADFMKTK-DLKHKKL-PLGLTFSFPCRQTKLEEGVLLSWTKKFKARGVQDTDVVSRLTKAMRRHKDMDVDILALVNDTVGTMMTCAYDDPYCEVGVIIG 231
The following BLAST results are available for this feature:
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