TCONS_00059520 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059520
Unique NameTCONS_00059520
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1803

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059520 ID=TCONS_00059520|Name=TCONS_00059520|organism=Clytia hemisphaerica|type=transcript|length=1803bp
GAAATGGGAATTTGGGATTTGGTTTTAAAAGAATGGTGTACATTAGGTTT
TGTTCACAAAAAACGAGAGCTTTTCGAATAAAGATTTTGCTGTAGAGAAA
GTAACATGGGGAGGATTGACTTCGCGAGTATTTATGAGATAAATCTTTGA
TCAAAATGGAGACGTTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTG
TCATATTTGCATCGGACGATTTCAGTTCCAGGAAGAACAGGCTTagATGA
GGAATTCCATTGTCATCCGAACGGTATGACATTTGTAATATACAATTTTA
CCCTGTATGAAAGAAATAATATTACAATAAAGTTCAAAAATGTTACCGGA
AAATCAGCTGGAGACTGCACTCGAAAATATACGCAAGAAGTGAAAGTGCC
GCCTGCACTAAGAGCTCCATACAATGAATGTGGCATAGAATCCCATCAGA
GAAATGGTGAATTGGTTTACACTCAGACAATAATTGTTTCTTATAACGAA
ACAATCTCGGTTGAAAGACTGGTTTATCGAGAACACATATTTGATATACA
TCTCGAATGTACTATAAGTAAGCTTCATGAAGTCGAGTTGGATGGCTACC
TCAACGTGACGAAATCGAAAGAACGAGTATTTACAAAAGTTGGTGATGTT
ACAATTGACCTGCAAATGATCCGGTTTACAGATGCCACTTTTACCAAGGA
AGATATTTCCCCCATACTAAAATTAGACAAGTTTATGTACTTTCTAATCA
CGATGTCTCCTGACAATGGGTTCTTTTTGTCTCTGCAACAATGCTATGCT
ACTAATGAATGGAATTCTACCGAGAGGCACTACATAATAGAAGACAAATG
TCCAAACATAGACGATAACACTGTACAGATTATGGAAAGTGAACACCCAA
CTGCTGTCATCAAATGGCAAAGTAAAGCATTCAGATTTTTTGAATCAAAT
TCACTCTTCATCAAATGCGAAGTTTTTATTTGTGATCCAGGAAGCCCTTT
TCCACATCCAGAATGCATGCCTTGTGATCTAAGTCTAGTTGATAAAAAAC
GTCGTGGTTTGAGATCACCCAGTACTGATGAATTGAAGAAATCAACTGTA
ACATCAAAAATGTACTATTTAATtgGTGAAGAAGAAGACCATTATGCTCC
agaaaaccaaaaacaaccagcCATCTTTTCTGGTACTAAAGGCACAATCA
TCTTGGTATTgttgattctttttattttggctgttttgatttgttttatc
AAGAAATTCATTGAGTTCGTTGCAAAGTACAATGAACGGCATGCTAAAGA
CGTGAATCTAGAAGAAAATACTCAGAATGTGAACGAAGAAAAATTATGAA
TCTTgacttttgattattttgttttgtttggaaATCTCTATGAAGAAATA
GAAGCAATTCTTATATCAATTTCATTTATTATATGAATATACTTACTAGt
gctaaaaatatatttaatttatcatcaatgtaaaaaaaggattctaatta
tatcaaaatctcaaaacttagaTAATTTTGCAATCAATCTANGAAAATTC
TAATTAtatcaaaatctcaaaacttagaTCATTTTGCAATCGATCTAGGT
TCGAACCAATGaaatataagcccgaagggctagaagcgcaATATCCTTTG
TGGGATTTTAAGCAAATAAATCCTAcaaaagttgcgcggcctagaATTTA
tcgctaaatttcaaaataaaaacaatggaatcgctagattcaatccgtcg
ccAAAAATACAGCACATgttttttaaggctttattttttcttgcatgaga
aag
Run BLAST on NCBI

protein sequence of TCONS_00059520-protein

>TCONS_00059520-protein ID=TCONS_00059520-protein|Name=TCONS_00059520-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
METFYCVFLFMLYLLSYLHRTISVPGRTGLDEEFHCHPNGMTFVIYNFTL
YERNNITIKFKNVTGKSAGDCTRKYTQEVKVPPALRAPYNECGIESHQRN
GELVYTQTIIVSYNETISVERLVYREHIFDIHLECTISKLHEVELDGYLN
VTKSKERVFTKVGDVTIDLQMIRFTDATFTKEDISPILKLDKFMYFLITM
SPDNGFFLSLQQCYATNEWNSTERHYIIEDKCPNIDDNTVQIMESEHPTA
VIKWQSKAFRFFESNSLFIKCEVFICDPGSPFPHPECMPCDLSLVDKKRR
GLRSPSTDELKKSTVTSKMYYLIGEEEDHYAPENQKQPAIFSGTKGTIIL
VLLILFILAVLICFIKKFIEFVAKYNERHAKDVNLEENTQNVNEEKL
Run BLAST on NCBI

transcript from alignment at scaffold_329:431649..439730+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059520 ID=TCONS_00059520|Name=TCONS_00059520|organism=Clytia hemisphaerica|type=transcript|length=8082bp|location=Sequence derived from alignment at scaffold_329:431649..439730+ (Clytia hemisphaerica)
GAAATGGGAATTTGGGATTTGGTTTTAAAAGAATGGTGTACATTAGGTTT TGTTCACAAAAAACGAGAGCTTTTCGAATAAAGATTTTGCTGTAGAGAAA GTAACATGGGGAGGATTGACTTCGCGAGTATTTATGAGATAAATCTTTGA TCAAAATGGAGACGTTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTG TCATATTTGCATCGGACGATTTCAGTTCCAGGAAGAACAGGCTTaggtat gaattttttttatcaaccgAATAAAAGTCCTTATACTTATGACccatatt ttgattatttctagcAGAAGGCTTTGAAATATTTCcggacagttagtcac actagcgtcccgccaaaatgcgtatcaaagattaatgctgcgaaagcgct atatcgtttacctgactctcaagcaaaaaaatgcgccgcaaaacttctaa agggatttatcaaaaaataacccggcgctttttaatgaaattagcatttt caaaaactttgagaaattgcctaaaatttgagccatagataaaaaaattt gagccaagccaaccttgaaaactaatttgaagatcaatttcccaagaaaa agatctacaggggaggcggaacccacctagatccgcgcactgccggatag gctatctcccggaaattttgccggacctcaaacaatgacccatttacatg tgcgtaattgtttttactttagcgtataaacaaggccttaaaaatcgaag cgctgtctcgggaattgaatggcaaattttggttggctgattttggctgc tgcacgttttattttgtttcaaacgttcaagttttaattaattgtcttgc gaacttgattcaggtaactctcatccttgttgtgcaaatgcatcctgtag atgactgatgttgttttttctgaaagctagattttcTAGTGTGACTAATT GCCGGGGGTACTAAAAAGTTTGTGACAAAAGTATGTGGACAAATTAGCTT TTTTGACATCATTTTCTCAGCACCTATTCATCCTATGTTAGAAaattata caccgttggaaagatatttccaagaaaaatgatattaaggaaaaaatatt tttgaataatactttttttttaaatcatggcatgaaatttctttaaatat ttgagcctttttgatttcaaatctgtattcagatttttcatatctttctt ggaaggaagaaagaaagaaaaaatctgaACCATTTGAAGGCAGAAATGCT CAAAGTCTTAGCCCAGCTGACACAATACGTTATTTCATCTAAAGTTATAT GAACGCTGTGGACATTAGATCAACGTTATAACAACGTTATGTATCAACTG GGAAGGGTGCCTTGCACTTCTTTCCTCTCcacttttattttctttctcaa atCTTTAGAGAAGAAAATCACAAACTCAAAATTAACCTTCCAACAAGGTA TAGCTAATAATCAAAAGCAATGTTTACAAATTTAGGGAttaccaattttt ttggaacGAATTTATTTGGGGTTTATTTAAAATGCCCGTTATTTTTTAGA TGAGGAATTCCATTGTCATCCGAACGGTATGACATTTGTAATATACAATT TTACCCTGTATGAAAGAAATAATATTACAATAAAGTTCAAAAATGTTACC GGAAAATCAGCTGGAGACTGCACTCGAAAATATACGCAAGAAGTGAAAGT GCCGCCTGCACTAAGAGCTCCATACAATGAATGTGGCATAGAATCCCATC AGAGAAATGGTGAATTGGTTTACACTCAGACAATAATTGTTTCTTATAAC GAAACAATCTCGGTTGAAAGACTGGTTTATCGAGAACACATATTTGATAT ACATCTCGAATGTACTATAAGTAAGCTTCATGAAGTCGAGTTGGATGGCT ACCTCAACGTGACGAAATCGAAAGAACGAGTATTTACAAAAGGTACGTCt attaatataattttgtttagaaaatgaatttaaaatttactcttgtctcc cgaatagatgGGGGTCCGAAGAAGCAGGGGGGGGTCCGACTAATCTTGCT TCACACCCTtttcaatccaatgtgaaaaaagcttctgaattaaaattgat gagtaagcaaacgatatcactattatttaaaaacaaaacttttaaagaaa tTGCAATAACTAACCCCTTTTATCATAAGTAACACGCgtttttcaatgtt ttattgaatatttcctatctatataggaaatatttgttaaaacggtaatt tttcttcttctccaagtctaacgctcggttttggtcaatttcgtgagttt gtacatgagtctctttttaaatcaagctccggcggtaaaaacagtaggaa gtttttttttcgaggcggaagacgtcatatCTTCGAGGaacgtctgtggt aaatatccgtacggtgctctattctccttgtcgatcgggcagcgtcggcc gtttcagaagcgtattgttgatcggaccatacctactgctttgtttctaa ctgtcaaaacaaagatggttgaaaatagacaacaacttttgctctttcgc taacttttctttgctttggtttatatgctttgatgagttgaattggatta TGATTNttttcgctacttttctttggtttggtttatatgctttgatgagt tgaattggatcatgatttttgtacgattgtcacaaggaatggtcgatagt aaacttttcttaatattcctttctggatttgatcTTTCGTTTACATCCTG TTGGTTTGGCTGGAATGAGCTGGAGAGAGATgatacaatgctggacaaaa ggtttgtagacttctgcaatatttgcaaaatacttcaatatcgatcaaaa acaagttcccaagaggctctgggtgctttccaNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaaaccacaagg gcttgattaactggcttacaccagtatcaaaacgctgattttttgcttgt ggttccctcaaaagcaattcaaaagcaatgcaaagacttcgaaagtgttt ttcttaacttccgtcccctttcagacacattgaagagtcattttgctcta tttctcatcatttttcactgaaatttcatttgtctacaaccttttgtccg gcattgtacAATCTCTTGCGTCTTGGaatgaaaaacaggacattttatca agtttcacaacaaactaacttcaattttgtttgtatatttacataaatcg tacaaaggcaagtgactgtgaataaatctgaccatgttatacctgaaaaa ttacatacttgcaatcaatatgaaaaaagtttgcacctaACGAATACAAt gccgacaatgcaacaatgggaatggttgatgaactgattttagctaagaa tttaaacatggagcaaaatagactggttaatgattgaatttcccttggtt tttttatctacaacaatgaattaactgctggggttagtgacagttagtga aactcgttgcggttataaatttcaaattttaaagctgataaccggatccg gaacaccggaacacaaaatttttcttgaacttggagattttcttccccgc gtgcattttataacgtggaaaactttagttgtgaattttagagatctttt gtaacttgtgttttaaacgtagaaacttttgtcgtgaatttggagatttt cttacagtcaactgctccaacttgggcctatctgacaaaacatgggacgg caatttggccaccatttcgccgaacctccaaagtcatttgatttgagtta atgaacaacgtattaaaaaatggcaaaacgatggagcgtttgacgtcact cgcgcggcaagttacacacgcgttatttgttaatcccgataggcggttag gcagcgggtgttctctaattctccaatcggcgctatcagtgaaagttatc gtgacatgttatgaaaggaagtatgattgataaacttggtggagttatca aaacaagtttgttgtcaaagagatttaacaagttagtgaaaatacagacc agatatcaaccagtcccatgtttcgaccaatcgtcccaagttaaagcagt tgacggtatgtacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNtatatatgaaagtataatgcaaaatatttcat ctcattttgaaaatatataaaattttctttggttttcttactgtgaaata ttctcctttttgtctatctttcattttaaatatttgccctttttggctat ataatatttctggaaatcagcgcttaaaatttaataattatataatcagc TCTTTTGATGTGTTTAACAACActacttggcggtgcgacgccgggtgacc gctagtataatactaaaatcatttaaagtccacctaacgaaaattaaagt tccagccaatttgattactgcattgttgttctcagtcgggttcagcttgg atatatttcgtgatccgtagctttgaaACTACAGTCATCTCATGAATAat cataaatggaattttgaaattcttagggacttgtgttgcttgatgttatc tgagatttaaagcactttgaaatcttttgaggacatcaattattatttta acatttgtaaaggaaATATTTATCCGCATCTTTGCGGCTCTTGTTTATTT TTAAAGTTGGTGATGTTACAATTGACCTGCAAATGATCCGGTTTACAGAT GCCACTTTTACCAAGGAAGATATTTCCCCCATACTAAAATTAGACAAGTT TATGTACTTTCTAATCACGATGTCTCCTGACAATGGGTTCTTTTTGTCTC TGCAACAATGCTATGCTACTAATGAATGGAATTCTACCGAGAGGCACTAC ATAATAGAAGACAAGTGAGATTTATTGTAAAGATTTATACTTGGGTCACT ACAATATAACCCTTTTGATACCCTTGTATCACATGGGAAAATACCTTATA ATTTCAGCCCAACTtggaaattaaattttatttcatccccatttgaaatt caatgtttgaGAATTGCACTTCAAGATCATTGATTGCCACTGAATTTTTA AACCTtagaacaaaggaatttctatcaccattgggatttcaatagaaatt tttatccacactgagaaaaaaagttccaccggggctgtgagacaggggtg cccTTTGTCTTGGGAATACaccttttttgttaaaatacacAGGGGGCTGT GTTTTAACAAAACACCCAGTTCTTTGATGAAGTTGGAGACATATCTCTAT GTCTCATGACTGGTCTTTCTAAGACTTGGGGGTAATTAACAATttataat agacgatatcggcttaaccgaattctccccgaatgattacccatgatgca tcgcgcaaaaaaattcacggacgataacccaaaccctaacaatgcatcat gggtaatcattcggggagaattcggaaagccgatatcgtctattggaaat gacattcttagcttgagtagcaaaattccatgatggtgttattcttagca ttattcttaattttttgcccattttcatcatggacattcttataaagtgt attcttataaaagtgtGTATTCCTTGGCTTATTCTAGATGTCCAAACATA GACGATAACACTGTACAGATTATGGAAAGTGAACACCCAACTGCTGTCAT CAAATGGCAAAGTAAAGCATTCAGATTTTTTGAATCAAATTCACTCTTCA TCAAATGCGAAGTTTTTATTTGTGATCCAGGAAGCCCTTTTCCACATCCA GAATGCATGCCTTGTGATCTAAGTCTAGTTGATAAAAAACGTCGTGGTTT GAGATCACCCAGTACTGATGAATTGAAGAAATCAACTGTAACATCAAAAA TGTACTATTTAATtggtgagtgttttttttttgtattacaCTTTCCAGGc gggaaaaagaaaaatatcaaaacagaaACAAAAGTAGAAATTGTTTTCCC TCCTTCTCTTTTATAATGACTCCAAAGGACACAAAATATCTTTCGAATTT TTCACAAGGCCTAGAGTTATGGTGATTCAATCACGTAGATGGTAATTTAA TGTTCGATTAGTGAGTCGAGAACAAGTTGCCTCTGAATGCGTGGTCACAG ACTATTTGTTATGTACTACtcgttttttctataagaacaaactatataag aatataaggttTCGCTGGCCAAAacgttaagaacaaattaaaaacatttt aaggcttaaaactcaaaaacatcctaatttttaggaaaatggtcaaaaac attcacaaaatggtcaaaacaagaacatgttaagattcaaaaatttttga tgttcttataaaaaaacgtgtttgtATGTAAATAGAAAGTTTCTTTACAT TCAGGTGAAGAAGAAGACCATTATGCTCCagaaaaccaaaaacaaccagc CATCTTTTCTGGTACTAAAGGCACAATCATCTTGGTATTgttgattcttt ttattttggctgttttgatttgttttatcAAGAAATTCATTGAGTTCGTT GCAAAGTACAATGAACGGCATGCTAAAGACGTGAATCTAGAAGAAAATAC TCAGAATGTGAACGAAGAAAAATTATGAATCTTgacttttgattattttg ttttgtttggaaATCTCTATGAAGAAATAGAAGCAATTCTTATATCAATT TCATTTATTATATGAATATACTTACTAGtgctaaaaatatatttaattta tcatcaatgtaaaaaaaggattctaattatatcaaaatctcaaaacttag aTAATTTTGCAATCAATCTANGAAAATTCTAATTAtatcaaaatctcaaa acttagaTCATTTTGCAATCGATCTAGGTTCGAACCAATGaaatataagc ccgaagggctagaagcgcaATATCCTTTGTGGGATTTTAAGCAAATAAAT CCTAcaaaagttgcgcggcctagaATTTAtcgctaaatttcaaaataaaa acaatggaatcgctagattcaatccgtcgccAAAAATACAGCACATgttt tttaaggctttattttttcttgcatgagaaag

Coding sequence (CDS) from alignment at scaffold_329:431649..439730+

>TCONS_00059520 ID=TCONS_00059520|Name=TCONS_00059520|organism=Clytia hemisphaerica|type=CDS|length=5970bp|location=Sequence derived from alignment at scaffold_329:431649..439730+ (Clytia hemisphaerica)
ATGGAGACGTTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTGTCATA
TTTGCATCGGACGATTTCAGTTCCAGGAAGAACAGGCTTagATGAGGAAT
TCCATTGTCATCCGAACGGTATGACATTTGTAATATACAATTTTACCCTG
TATGAAAGAAATAATATTACAATAAAGTTCAAAAATGTTACCGGAAAATC
AGCTGGAGACTGCACTCGAAAATATACGCAAGAAGTGAAAGTGCCGCCTG
CACTAAGAGCTCCATACAATGAATGTGGCATAGAATCCCATCAGAGAAAT
GGTGAATTGGTTTACACTCAGACAATAATTGTTTCTTATAACGAAACAAT
CTCGGTTGAAAGACTGGTTTATCGAGAACACATATTTGATATACATCTCG
AATGTACTATAAGTAAGCTTCATGAAGTCGAGTTGGATGGCTACCTCAAC
GTGACGAAATCGAAAGAACGAGTATTTACAAAAGTTGGTGATGTTACAAT
TGACCTGCAAATGATCCGGTTTACAGATGCCACTTTTACCAAGGAAGATA
TTTCCCCCATACTAAAATTAGACAAGTTTATGTACTTTCTAATCACGATG
TCTCCTGACAATGGGTTCTTTTTGTCTCTGCAACAATGCTATGCTACTAA
TGAATGGAATTCTACCGAGAGGCACTACATAATAGAAGACAAATGTCCAA
ACATAGACGATAACACTGTACAGATTATGGAAAGTGAACACCCAACTGCT
GTCATCAAATGGCAAAGTAAAGCATTCAGATTTTTTGAATCAAATTCACT
CTTCATCAAATGCGAAGTTTTTATTTGTGATCCAGGAAGCCCTTTTCCAC
ATCCAGAATGCATGCCTTGTGATCTAAGTCTAGTTGATAAAAAACGTCGT
GGTTTGAGATCACCCAGTACTGATGAATTGAAGAAATCAACTGTAACATC
AAAAATGTACTATTTAATtgGTGAAGAAGAAGACCATTATGCTCCagaaa
accaaaaacaaccagcCATCTTTTCTGGTACTAAAGGCACAATCATCTTG
GTATTgttgattctttttattttggctgttttgatttgttttatcAAGAA
ATTCATTGAGTTCGTTGCAAAGTACAATGAACGGCATGCTAAAGACGTGA
ATCTAGAAGAAAATACTCAGAATGTGAACGAAGAAAAATTATGAATGGAG
ACGTTTTACTGTGTTTTCTTGTTCATGCTTTACTTGCTGTCATATTTGCA
TCGGACGATTTCAGTTCCAGGAAGAACAGGCTTagATGAGGAATTCCATT
GTCATCCGAACGGTATGACATTTGTAATATACAATTTTACCCTGTATGAA
AGAAATAATATTACAATAAAGTTCAAAAATGTTACCGGAAAATCAGCTGG
AGACTGCACTCGAAAATATACGCAAGAAGTGAAAGTGCCGCCTGCACTAA
GAGCTCCATACAATGAATGTGGCATAGAATCCCATCAGAGAAATGGTGAA
TTGGTTTACACTCAGACAATAATTGTTTCTTATAACGAAACAATCTCGGT
TGAAAGACTGGTTTATCGAGAACACATATTTGATATACATCTCGAATGTA
CTATAAGTAAGCTTCATGAAGTCGAGTTGGATGGCTACCTCAACGTGACG
AAATCGAAAGAACGAGTATTTACAAAAGTTGGTGATGTTACAATTGACCT
GCAAATGATCCGGTTTACAGATGCCACTTTTACCAAGGAAGATATTTCCC
CCATACTAAAATTAGACAAGTTTATGTACTTTCTAATCACGATGTCTCCT
GACAATGGGTTCTTTTTGTCTCTGCAACAATGCTATGCTACTAATGAATG
GAATTCTACCGAGAGGCACTACATAATAGAAGACAAATGTCCAAACATAG
ACGATAACACTGTACAGATTATGGAAAGTGAACACCCAACTGCTGTCATC
AAATGGCAAAGTAAAGCATTCAGATTTTTTGAATCAAATTCACTCTTCAT
CAAATGCGAAGTTTTTATTTGTGATCCAGGAAGCCCTTTTCCACATCCAG
AATGCATGCCTTGTGATCTAAGTCTAGTTGATAAAAAACGTCGTGGTTTG
AGATCACCCAGTACTGATGAATTGAAGAAATCAACTGTAACATCAAAAAT
GTACTATTTAATtgGTGAAGAAGAAGACCATTATGCTCCagaaaaccaaa
aacaaccagcCATCTTTTCTGGTACTAAAGGCACAATCATCTTGGTATTg
ttgattctttttattttggctgttttgatttgttttatcAAGAAATTCAT
TGAGTTCGTTGCAAAGTACAATGAACGGCATGCTAAAGACGTGAATCTAG
AAGAAAATACTCAGAATGTGAACGAAGAAAAATTATGAATGGAGACGTTT
TACTGTGTTTTCTTGTTCATGCTTTACTTGCTGTCATATTTGCATCGGAC
GATTTCAGTTCCAGGAAGAACAGGCTTagATGAGGAATTCCATTGTCATC
CGAACGGTATGACATTTGTAATATACAATTTTACCCTGTATGAAAGAAAT
AATATTACAATAAAGTTCAAAAATGTTACCGGAAAATCAGCTGGAGACTG
CACTCGAAAATATACGCAAGAAGTGAAAGTGCCGCCTGCACTAAGAGCTC
CATACAATGAATGTGGCATAGAATCCCATCAGAGAAATGGTGAATTGGTT
TACACTCAGACAATAATTGTTTCTTATAACGAAACAATCTCGGTTGAAAG
ACTGGTTTATCGAGAACACATATTTGATATACATCTCGAATGTACTATAA
GTAAGCTTCATGAAGTCGAGTTGGATGGCTACCTCAACGTGACGAAATCG
AAAGAACGAGTATTTACAAAAGTTGGTGATGTTACAATTGACCTGCAAAT
GATCCGGTTTACAGATGCCACTTTTACCAAGGAAGATATTTCCCCCATAC
TAAAATTAGACAAGTTTATGTACTTTCTAATCACGATGTCTCCTGACAAT
GGGTTCTTTTTGTCTCTGCAACAATGCTATGCTACTAATGAATGGAATTC
TACCGAGAGGCACTACATAATAGAAGACAAATGTCCAAACATAGACGATA
ACACTGTACAGATTATGGAAAGTGAACACCCAACTGCTGTCATCAAATGG
CAAAGTAAAGCATTCAGATTTTTTGAATCAAATTCACTCTTCATCAAATG
CGAAGTTTTTATTTGTGATCCAGGAAGCCCTTTTCCACATCCAGAATGCA
TGCCTTGTGATCTAAGTCTAGTTGATAAAAAACGTCGTGGTTTGAGATCA
CCCAGTACTGATGAATTGAAGAAATCAACTGTAACATCAAAAATGTACTA
TTTAATtgGTGAAGAAGAAGACCATTATGCTCCagaaaaccaaaaacaac
cagcCATCTTTTCTGGTACTAAAGGCACAATCATCTTGGTATTgttgatt
ctttttattttggctgttttgatttgttttatcAAGAAATTCATTGAGTT
CGTTGCAAAGTACAATGAACGGCATGCTAAAGACGTGAATCTAGAAGAAA
ATACTCAGAATGTGAACGAAGAAAAATTATGAATGGAGACGTTTTACTGT
GTTTTCTTGTTCATGCTTTACTTGCTGTCATATTTGCATCGGACGATTTC
AGTTCCAGGAAGAACAGGCTTagATGAGGAATTCCATTGTCATCCGAACG
GTATGACATTTGTAATATACAATTTTACCCTGTATGAAAGAAATAATATT
ACAATAAAGTTCAAAAATGTTACCGGAAAATCAGCTGGAGACTGCACTCG
AAAATATACGCAAGAAGTGAAAGTGCCGCCTGCACTAAGAGCTCCATACA
ATGAATGTGGCATAGAATCCCATCAGAGAAATGGTGAATTGGTTTACACT
CAGACAATAATTGTTTCTTATAACGAAACAATCTCGGTTGAAAGACTGGT
TTATCGAGAACACATATTTGATATACATCTCGAATGTACTATAAGTAAGC
TTCATGAAGTCGAGTTGGATGGCTACCTCAACGTGACGAAATCGAAAGAA
CGAGTATTTACAAAAGTTGGTGATGTTACAATTGACCTGCAAATGATCCG
GTTTACAGATGCCACTTTTACCAAGGAAGATATTTCCCCCATACTAAAAT
TAGACAAGTTTATGTACTTTCTAATCACGATGTCTCCTGACAATGGGTTC
TTTTTGTCTCTGCAACAATGCTATGCTACTAATGAATGGAATTCTACCGA
GAGGCACTACATAATAGAAGACAAATGTCCAAACATAGACGATAACACTG
TACAGATTATGGAAAGTGAACACCCAACTGCTGTCATCAAATGGCAAAGT
AAAGCATTCAGATTTTTTGAATCAAATTCACTCTTCATCAAATGCGAAGT
TTTTATTTGTGATCCAGGAAGCCCTTTTCCACATCCAGAATGCATGCCTT
GTGATCTAAGTCTAGTTGATAAAAAACGTCGTGGTTTGAGATCACCCAGT
ACTGATGAATTGAAGAAATCAACTGTAACATCAAAAATGTACTATTTAAT
tgGTGAAGAAGAAGACCATTATGCTCCagaaaaccaaaaacaaccagcCA
TCTTTTCTGGTACTAAAGGCACAATCATCTTGGTATTgttgattcttttt
attttggctgttttgatttgttttatcAAGAAATTCATTGAGTTCGTTGC
AAAGTACAATGAACGGCATGCTAAAGACGTGAATCTAGAAGAAAATACTC
AGAATGTGAACGAAGAAAAATTATGAATGGAGACGTTTTACTGTGTTTTC
TTGTTCATGCTTTACTTGCTGTCATATTTGCATCGGACGATTTCAGTTCC
AGGAAGAACAGGCTTagATGAGGAATTCCATTGTCATCCGAACGGTATGA
CATTTGTAATATACAATTTTACCCTGTATGAAAGAAATAATATTACAATA
AAGTTCAAAAATGTTACCGGAAAATCAGCTGGAGACTGCACTCGAAAATA
TACGCAAGAAGTGAAAGTGCCGCCTGCACTAAGAGCTCCATACAATGAAT
GTGGCATAGAATCCCATCAGAGAAATGGTGAATTGGTTTACACTCAGACA
ATAATTGTTTCTTATAACGAAACAATCTCGGTTGAAAGACTGGTTTATCG
AGAACACATATTTGATATACATCTCGAATGTACTATAAGTAAGCTTCATG
AAGTCGAGTTGGATGGCTACCTCAACGTGACGAAATCGAAAGAACGAGTA
TTTACAAAAGTTGGTGATGTTACAATTGACCTGCAAATGATCCGGTTTAC
AGATGCCACTTTTACCAAGGAAGATATTTCCCCCATACTAAAATTAGACA
AGTTTATGTACTTTCTAATCACGATGTCTCCTGACAATGGGTTCTTTTTG
TCTCTGCAACAATGCTATGCTACTAATGAATGGAATTCTACCGAGAGGCA
CTACATAATAGAAGACAAATGTCCAAACATAGACGATAACACTGTACAGA
TTATGGAAAGTGAACACCCAACTGCTGTCATCAAATGGCAAAGTAAAGCA
TTCAGATTTTTTGAATCAAATTCACTCTTCATCAAATGCGAAGTTTTTAT
TTGTGATCCAGGAAGCCCTTTTCCACATCCAGAATGCATGCCTTGTGATC
TAAGTCTAGTTGATAAAAAACGTCGTGGTTTGAGATCACCCAGTACTGAT
GAATTGAAGAAATCAACTGTAACATCAAAAATGTACTATTTAATtgGTGA
AGAAGAAGACCATTATGCTCCagaaaaccaaaaacaaccagcCATCTTTT
CTGGTACTAAAGGCACAATCATCTTGGTATTgttgattctttttattttg
gctgttttgatttgttttatcAAGAAATTCATTGAGTTCGTTGCAAAGTA
CAATGAACGGCATGCTAAAGACGTGAATCTAGAAGAAAATACTCAGAATG
TGAACGAAGAAAAATTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037466XLOC_037466Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059520-exon-scaffold_329-1491911889:431649..431894TCONS_00059520-exon-scaffold_329-1491911889:431649..431894Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1510915933:431649..431894TCONS_00059520-exon-scaffold_329-1510915933:431649..431894Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1575043694:431649..431894TCONS_00059520-exon-scaffold_329-1575043694:431649..431894Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1491911889:433198..433590TCONS_00059520-exon-scaffold_329-1491911889:433198..433590Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1510915933:433198..433590TCONS_00059520-exon-scaffold_329-1510915933:433198..433590Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1575043694:433198..433590TCONS_00059520-exon-scaffold_329-1575043694:433198..433590Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1491911889:437355..437562TCONS_00059520-exon-scaffold_329-1491911889:437355..437562Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1510915933:437355..437562TCONS_00059520-exon-scaffold_329-1510915933:437355..437562Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1575043694:437355..437562TCONS_00059520-exon-scaffold_329-1575043694:437355..437562Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1491911889:438286..438563TCONS_00059520-exon-scaffold_329-1491911889:438286..438563Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1510915933:438286..438563TCONS_00059520-exon-scaffold_329-1510915933:438286..438563Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1575043694:438286..438563TCONS_00059520-exon-scaffold_329-1575043694:438286..438563Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1491911889:439053..439730TCONS_00059520-exon-scaffold_329-1491911889:439053..439730Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1510915933:439053..439730TCONS_00059520-exon-scaffold_329-1510915933:439053..439730Clytia hemisphaericaexon
TCONS_00059520-exon-scaffold_329-1575043694:439053..439730TCONS_00059520-exon-scaffold_329-1575043694:439053..439730Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059520-proteinTCONS_00059520-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:431649..439730 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
321.414 328.818 61.3634 30.3008 0.630313 0.332054 0.371994 0.241101 0.0562668 0.720187 0.135296 0.0444692 0.11842 0.169098 0.0379149 0.244131 0.0501249 0.102753 0.0236597 0 0.473426 0.220424 105.421 90.2748 0.0955856 0.0639809 4.91353 6.93752 37.8212 41.7303
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001507ZP_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059520 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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