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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059555 ID=TCONS_00059555|Name=TCONS_00059555|organism=Clytia hemisphaerica|type=transcript|length=731bp
AAAATCGAAAGCAAACAATAAAACTTCATCGTCTGTCGTAAGGTACGCAA
GACTGGTGTATTCCAAACAATCATACAACAATTACCGAAAAGAAGCTGAA
CAGTTGTTAAATCAATTACCATTCCCTGCTCGTTACGAACTAGTCGATGA
TGACACATCACAAAACGAAAGTCTTGATGAAGATATGGATTTGATAGCTG
ATCTCTTGGATGCATACGATTTAGAATCTACTTCAATAACATCCAATATT
TCTAATTTTAATGACCAAGACGCTGAAGCTCTGAGAGAATATCtggaaaa
attgaaacagaatTTATGATGAGTTCTTGAACCTTCAATAATTAGTTCaa
acagtttttttgttttgtttttcgctACCATTTCTAATTTTAATGACCAA
GACGCAGAAACTCTGTGAGAGAATATCtggaaaaattgaaacagaatCCA
TGATGAGGTTCTGCTGGTTGAAAGCTTTCAAATACAGTTGTCTCTCTCTa
aatcgatcttcaagggactaaAAACtgtattcgaattagagaaagtttaG
TAATGAAAATCACTTctcagctgaggggaccaatatttagttcgaattat
agaaagaatcgaataatagagattcgaattagaaagagttGACTTTATTA
CTTTTGTTGTAACCTTTCAATATTcgggattttcaaaaaattagtaTTTG
CATGAATACGTCTGTGTCTTTTGCATTAAGg Run BLAST on NCBI transcript from alignment at scaffold_329:721038..722128+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059555 ID=TCONS_00059555|Name=TCONS_00059555|organism=Clytia hemisphaerica|type=transcript|length=1091bp|location=Sequence derived from alignment at scaffold_329:721038..722128+ (Clytia hemisphaerica)
AAAATCGAAAGCAAACAATAAAACTTCATCGTCTGTCGTAAGGTACGCAA
GGTAAACATTTCCTTCGAAAAAAACTTGCCTGAAAATTCATCTCTTTGAA
CTCAACGACCAAGATAGCTTAAATCTTAAGCTTTCTTGGCTCAAGCAAAA
AGCGAAGATATCCAATGCTATGAGAAAAGTAATATTTGATAAGGAGGGGT
TTATTCAGTTTAACTGTTTATTGGAAAAATAGATTAACGACCAAGATAGA
TTTAGATCTTAAGCTTTCTTGGCtcaagcaaaaaagtgaaaaatgcttCC
AATGCTAAAAATGATTAtgagaaaatcaatatttgatgAGGAGGGGTTGA
TTCAGTTTAACTGTTTATTGGAAAAATAGattatttatattttgattGCC
TTCATCTTCAGACTGGTGTATTCCAAACAATCATACAACAATTACCGAAA
AGAAGCTGAACAGTTGTTAAATCAATTACCATTCCCTGCTCGTTACGAAC
TAGTCGATGATGACACATCACAAAACGAAAGTCTTGATGAAGATATGGAT
TTGATAGCTGATCTCTTGGATGCATACGATTTAGAATCTACTTCAATAAC
ATCCAATATTTCTAATTTTAATGACCAAGACGCTGAAGCTCTGAGAGAAT
ATCtggaaaaattgaaacagaatTTATGATGAGTTCTTGAACCTTCAATA
ATTAGTTCaaacagtttttttgttttgtttttcgctACCATTTCTAATTT
TAATGACCAAGACGCAGAAACTCTGTGAGAGAATATCtggaaaaattgaa
acagaatCCATGATGAGGTTCTGCTGGTTGAAAGCTTTCAAATACAGTTG
TCTCTCTCTaaatcgatcttcaagggactaaAAACtgtattcgaattaga
gaaagtttaGTAATGAAAATCACTTctcagctgaggggaccaatatttag
ttcgaattatagaaagaatcgaataatagagattcgaattagaaagagtt
GACTTTATTACTTTTGTTGTAACCTTTCAATATTcgggattttcaaaaaa
ttagtaTTTGCATGAATACGTCTGTGTCTTTTGCATTAAGg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059555-exon-scaffold_329-1491911889:721038..721088 | TCONS_00059555-exon-scaffold_329-1491911889:721038..721088 | Clytia hemisphaerica | exon |
| TCONS_00059555-exon-scaffold_329-1510915933:721038..721088 | TCONS_00059555-exon-scaffold_329-1510915933:721038..721088 | Clytia hemisphaerica | exon |
| TCONS_00059555-exon-scaffold_329-1575043694:721038..721088 | TCONS_00059555-exon-scaffold_329-1575043694:721038..721088 | Clytia hemisphaerica | exon |
| TCONS_00059555-exon-scaffold_329-1491911889:721449..722128 | TCONS_00059555-exon-scaffold_329-1491911889:721449..722128 | Clytia hemisphaerica | exon |
| TCONS_00059555-exon-scaffold_329-1510915933:721449..722128 | TCONS_00059555-exon-scaffold_329-1510915933:721449..722128 | Clytia hemisphaerica | exon |
| TCONS_00059555-exon-scaffold_329-1575043694:721449..722128 | TCONS_00059555-exon-scaffold_329-1575043694:721449..722128 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:721038..722128 + |
Blast
The following BLAST results are available for this feature:
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