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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059563 ID=TCONS_00059563|Name=TCONS_00059563|organism=Clytia hemisphaerica|type=transcript|length=785bp
TAATATCGGTTTAGAATTCCGTCATAAAATGGTGCATCGCTTGAAAGATT
TACGGGAAGCTTACACAGTTGAAGAACTTCAAGCTAATGGCTCAGAAAAG
TTTAATTCAACCAGATTGGAAAGTATTCTATTTTTCAATGGATTGGTTGA
ACATTTCTGCTAAGAAAATAAAATCGAGATGAAACTACATATTCCAAACA
AATACAAGTCATTGTATGAATGGATGTGTTTTACTTCGccttcctttgaa
aatgaacTATTAGATGAAGTTGATTCAAAGATCTTCCCAAGGAGTTCACT
TCCCTTAGAGAAGATGAAGAAATACCATGGTCTTGAGATGAAAGGTACCA
TTCCATTGAAATATATTGCATTGGTGAAGTGCAATTAGAAGAGCATAAAT
CGTTGGATAGACATTTATCACAGTTACCGAAAACGTTTGGTCGCACTGCC
ATGAGAGTAAGAATACTTTACCAACTTCAAATATATCTTATACGATTTCA
TTGTTGTGAGGTGATTTTCTCATTAGAGATGCTTCAGACCCGGTGGAAGC
AGTGAGACTGGGGAGACTCCCCATTGTTGCGTAAATGAGATTTTTCCcct
caaattcctagcgaattttatctcattttgagccttcagcctgcTCTCTC
TTACAGGAGAGGAAGATTGTGATCTTTTAACAATATAGTGAACGCAGGTT
CTTTTCCTTCCCTTAGATAGTCTTAGTATTCATTCCAGTATTTCCATCAA
TGGTTTTTaccatacacgcttttttttataagaat Run BLAST on NCBI transcript from alignment at scaffold_329:817807..819296+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059563 ID=TCONS_00059563|Name=TCONS_00059563|organism=Clytia hemisphaerica|type=transcript|length=1490bp|location=Sequence derived from alignment at scaffold_329:817807..819296+ (Clytia hemisphaerica)
TAATATCGGTTTAGAATTCCGTCATAAAATGGTGCATCGCTTGAAAGATT
TACGGGAAGCTTACACAGTTGAAGAACTTCAAGCTAATGGCTCAGAAAAG
GTattgtttaatttttagttagggaattacatgtttttctttcataagCA
AAACGTTTATGAGAATATaaaggctcagtttttggtaccttaacaatggc
tctattgtttgagaacaatagaatgctaagcataatgcgagcctgatata
gggacagacacttgcttataaaaaaaatgtaagtgTTTATTCCTGAGAAA
ATGTTATTCTGTTTACAGCTAAGGGTAACATTTTATAAGCAGTTCACTAT
AATATTTGTAAACACGGCCAGTCttacattttcatcttaaaacaACTTTT
CTGAAGTGATTACTTACGGATTTGAGGCCAACAAATTGCTTGCACTTGCC
GAATTGGACTGGCAGAGTTGTGAAGTCTTTCAGGTTTCTCAGAGGATACT
CACTGTATAACAAAGAAGGAAAATTGTCTTTATGGAAGAATACAATCGAT
TTTGAAAAGGTGGCTCTTTATCCAAACCGAAtgatttttattagtttttt
tttcataaagggCGGGTGAATGTGACTAAGCCAAACCTGAAAGACTTCCA
GTAGCTTAGACAAGAGGAGCCACagtacattttatttttattttacgaat
gGATAAAAACAGTGTCATGAAAATCTgcacacaaattttgcgccccacTT
GTCTTCGCTTCTGAATTTTTATCCCCAGAACAAGTCAATTTTCTTTCCAT
TTCAGTTTAATTCAACCAGATTGGAAAGTATTCTATTTTTCAATGGATTG
GTTGAACATTTCTGCTAAGAAAATAAAATCGAGATGAAACTACATATTCC
AAACAAATACAAGTCATTGTATGAATGGATGTGTTTTACTTCGccttcct
ttgaaaatgaacTATTAGATGAAGTTGATTCAAAGATCTTCCCAAGGAGT
TCACTTCCCTTAGAGAAGATGAAGAAATACCATGGTCTTGAGATGAAAGG
TACCATTCCATTGAAATATATTGCATTGGTGAAGTGCAATTAGAAGAGCA
TAAATCGTTGGATAGACATTTATCACAGTTACCGAAAACGTTTGGTCGCA
CTGCCATGAGAGTAAGAATACTTTACCAACTTCAAATATATCTTATACGA
TTTCATTGTTGTGAGGTGATTTTCTCATTAGAGATGCTTCAGACCCGGTG
GAAGCAGTGAGACTGGGGAGACTCCCCATTGTTGCGTAAATGAGATTTTT
CCcctcaaattcctagcgaattttatctcattttgagccttcagcctgcT
CTCTCTTACAGGAGAGGAAGATTGTGATCTTTTAACAATATAGTGAACGC
AGGTTCTTTTCCTTCCCTTAGATAGTCTTAGTATTCATTCCAGTATTTCC
ATCAATGGTTTTTaccatacacgcttttttttataagaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059563-exon-scaffold_329-1491911889:817807..817906 | TCONS_00059563-exon-scaffold_329-1491911889:817807..817906 | Clytia hemisphaerica | exon |
| TCONS_00059563-exon-scaffold_329-1510915933:817807..817906 | TCONS_00059563-exon-scaffold_329-1510915933:817807..817906 | Clytia hemisphaerica | exon |
| TCONS_00059563-exon-scaffold_329-1575043694:817807..817906 | TCONS_00059563-exon-scaffold_329-1575043694:817807..817906 | Clytia hemisphaerica | exon |
| TCONS_00059563-exon-scaffold_329-1491911889:818612..819296 | TCONS_00059563-exon-scaffold_329-1491911889:818612..819296 | Clytia hemisphaerica | exon |
| TCONS_00059563-exon-scaffold_329-1510915933:818612..819296 | TCONS_00059563-exon-scaffold_329-1510915933:818612..819296 | Clytia hemisphaerica | exon |
| TCONS_00059563-exon-scaffold_329-1575043694:818612..819296 | TCONS_00059563-exon-scaffold_329-1575043694:818612..819296 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:817807..819296 + |
Blast
The following BLAST results are available for this feature:
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