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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00059579 ID=TCONS_00059579|Name=TCONS_00059579|organism=Clytia hemisphaerica|type=transcript|length=1861bp
TGATGAACAGACAAATCTCAATGAGGATGTTATTGAAAATTGCCAAAGAA
CAAGTCAGCCGTCAATTTATTTTGCTGACACCTCAAGATATGAGCAAGGT
GGCTTGTAGTGATCGTGTTCGATTGTTTAGGTTGAGTGATCCAGAACGTG
GTCAACAAACCATCGATTTTGAAGCTGCTTAAAAGTAACATTTATTGATA
AGTACCCTGGTGAAATCATTCCCTGTCAATGGGCTATTCctattccagaa
aaatttgtaccccctatgttgaggagatctttttttttaaggtgaccccc
ctggatttttttctaatttttcaggacccctttggatttttttctcccat
ctctttggaccaccctggattttcgatcTCGTTATACTGACCATCCTAGA
TTTTCAACCCGATTTTACTGACCACTTTGGActttatcattcaaaaaacc
aaaccctggattttttattttccagaccaccctggacgttacacctcctc
aacataggggtacagattatttctggaatagcccaatgctGTTCCTGATT
CTTTCAAAATGTACATGATGGAAATGCTCTTTCTGCTGACCTTGAAAGTT
GCAACCTTTTTTGGTACCTTTTCTTTTGTTACTTACCTGGATTTGATTGA
TGTTCATTACGAGAAAACAAGAGGCTGTATTATGAAGCTTAccatcttct
ttttgaagaagaagaaagtctAATTATCGGTATCCAATACGTATTTGATA
AAGGACGTTGATATGTAGATGTATAACCCTCGCCGTTATAATTTTCGATT
CCTAGCATGTTGCACAAATCTCGTACTTCCCGCTAAAGACGATTTCTGAA
TGAACTATTTATTGCATTCACGATACGGGTAGCTTACTACAATACAATTC
TACAACCCGTCTTTTCCAACTACCTTTCCCGTGTCCCGCCCAATACCTCC
AGTTCCAATTTTTAGCTGTAAAtacgtttatttttattttagtttttagt
tttataGATTTAAAAAACGATAACTCTCTTGTGTATTGTATACTTAGCAA
ATGTATAAACTAACCCTATCTTTATGATATGATAAACAGAAACACCATAT
ATAACTAGTTANGGGGTACAGATTATTTCTGGAATAGTCCAATGCTGTTC
CTGATTCTTTCAAAATGTACATGATGGAAATGCTCTTTCTGCTGACCTTG
AAAGTTGCAACCTTTTTTTGGTACCTTTTCTTTTGTTACTTACCTGGAGA
TTTGATTGATGTTCATTACGAGAAAACAAGAGGCTGTATTATGAAGCTTA
ccatcttctttttgaagaagaagaaagtctAATTATCGGTATCCAATACG
TATTTGATAAAGGACGTTGATATGTAGATGTATAACCCTCGCCGTTATAA
TTTTCGATTCCTAGCATGTTGCACAAATCTCGTACTTTCCGCTAAAGACG
TTTTCTGAATGAACTATTTATTGCAGTCACGATACGGGTAGCTTACTACA
TTACAATTCTACAACCCGCCTTTTCCAACTACCTTTCCCGTGTCCCGCCC
AATACCTCCAGTTCCAATTTTTAGCTGTAAAtacgtttatttttatttta
gtttttagttttataGATTTAAAAAACGATAACTCTCTTGTGTATTGTAT
ACTTAGCAAATGTATAAACTAACCCTATCTTTATGATAAACAGAAACACC
ATATATAACTAGTTAACCGCCAAGTTTCCTTTTTAttgtagtagtagtag
tatttGCATTAGTAAAGAGATATAAAAATTGTACATGATAAAGTTGCTAA
AAATAAagatagagaaaaaaaaattcctaaactAGAAACATTCGCAGGAG
TTAGAATAAGA Run BLAST on NCBI transcript from alignment at scaffold_329:193458..195318- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00059579 ID=TCONS_00059579|Name=TCONS_00059579|organism=Clytia hemisphaerica|type=transcript|length=1861bp|location=Sequence derived from alignment at scaffold_329:193458..195318- (Clytia hemisphaerica)
TGATGAACAGACAAATCTCAATGAGGATGTTATTGAAAATTGCCAAAGAA
CAAGTCAGCCGTCAATTTATTTTGCTGACACCTCAAGATATGAGCAAGGT
GGCTTGTAGTGATCGTGTTCGATTGTTTAGGTTGAGTGATCCAGAACGTG
GTCAACAAACCATCGATTTTGAAGCTGCTTAAAAGTAACATTTATTGATA
AGTACCCTGGTGAAATCATTCCCTGTCAATGGGCTATTCCTATTCCAGAA
AAATTTGTACCCCCTATGTTGAGGAGATCTTTTTTTTTAAGGTGACCCCC
CTGGATTTTTTTCTAATTTTTCAGGACCCCTTTGGATTTTTTTCTCCCAT
CTCTTTGGACCACCCTGGATTTTCGATCTCGTTATACTGACCATCCTAGA
TTTTCAACCCGATTTTACTGACCACTTTGGACTTTATCATTCAAAAAACC
AAACCCTGGATTTTTTATTTTCCAGACCACCCTGGACGTTACACCTCCTC
AACATAGGGGTACAGATTATTTCTGGAATAGCCCAATGCTGTTCCTGATT
CTTTCAAAATGTACATGATGGAAATGCTCTTTCTGCTGACCTTGAAAGTT
GCAACCTTTTTTGGTACCTTTTCTTTTGTTACTTACCTGGATTTGATTGA
TGTTCATTACGAGAAAACAAGAGGCTGTATTATGAAGCTTACCATCTTCT
TTTTGAAGAAGAAGAAAGTCTAATTATCGGTATCCAATACGTATTTGATA
AAGGACGTTGATATGTAGATGTATAACCCTCGCCGTTATAATTTTCGATT
CCTAGCATGTTGCACAAATCTCGTACTTCCCGCTAAAGACGATTTCTGAA
TGAACTATTTATTGCATTCACGATACGGGTAGCTTACTACAATACAATTC
TACAACCCGTCTTTTCCAACTACCTTTCCCGTGTCCCGCCCAATACCTCC
AGTTCCAATTTTTAGCTGTAAATACGTTTATTTTTATTTTAGTTTTTAGT
TTTATAGATTTAAAAAACGATAACTCTCTTGTGTATTGTATACTTAGCAA
ATGTATAAACTAACCCTATCTTTATGATATGATAAACAGAAACACCATAT
ATAACTAGTTANGGGGTACAGATTATTTCTGGAATAGTCCAATGCTGTTC
CTGATTCTTTCAAAATGTACATGATGGAAATGCTCTTTCTGCTGACCTTG
AAAGTTGCAACCTTTTTTTGGTACCTTTTCTTTTGTTACTTACCTGGAGA
TTTGATTGATGTTCATTACGAGAAAACAAGAGGCTGTATTATGAAGCTTA
CCATCTTCTTTTTGAAGAAGAAGAAAGTCTAATTATCGGTATCCAATACG
TATTTGATAAAGGACGTTGATATGTAGATGTATAACCCTCGCCGTTATAA
TTTTCGATTCCTAGCATGTTGCACAAATCTCGTACTTTCCGCTAAAGACG
TTTTCTGAATGAACTATTTATTGCAGTCACGATACGGGTAGCTTACTACA
TTACAATTCTACAACCCGCCTTTTCCAACTACCTTTCCCGTGTCCCGCCC
AATACCTCCAGTTCCAATTTTTAGCTGTAAATACGTTTATTTTTATTTTA
GTTTTTAGTTTTATAGATTTAAAAAACGATAACTCTCTTGTGTATTGTAT
ACTTAGCAAATGTATAAACTAACCCTATCTTTATGATAAACAGAAACACC
ATATATAACTAGTTAACCGCCAAGTTTCCTTTTTATTGTAGTAGTAGTAG
TATTTGCATTAGTAAAGAGATATAAAAATTGTACATGATAAAGTTGCTAA
AAATAAAGATAGAGAAAAAAAAATTCCTAAACTAGAAACATTCGCAGGAG
TTAGAATAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00059579-exon-scaffold_329-1575043694:193458..195318 | TCONS_00059579-exon-scaffold_329-1575043694:193458..195318 | Clytia hemisphaerica | exon |
| TCONS_00059579-exon-scaffold_329-1510915933:193458..195318 | TCONS_00059579-exon-scaffold_329-1510915933:193458..195318 | Clytia hemisphaerica | exon |
| TCONS_00059579-exon-scaffold_329-1491911889:193458..195318 | TCONS_00059579-exon-scaffold_329-1491911889:193458..195318 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_329 | supercontig | scaffold_329:193458..195318 - |
Blast
The following BLAST results are available for this feature:
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