TCONS_00059603 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059603
Unique NameTCONS_00059603
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1415

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059603 ID=TCONS_00059603|Name=TCONS_00059603|organism=Clytia hemisphaerica|type=transcript|length=1415bp
CCTTAATCGGGTTTGGAGGTTTTAACTGCTGTTTCTATGCTAGTTTCAAT
CAGTCGTTATTTTTCAGAATAAGATAGAAAAACAAACTTGGGCAGAGGGA
CACATTGAGCATTATTATGGATTTCAATGAATTACCTAATGAACTGCTGA
AAACAATCATCACATTTTTGGATATTAAAAGTGCAAAAAACATTGCATCA
TGCTCCGAGCGTATGTACGACCTGGCTTTAGATCGAATTTGGTCCAAGCC
ACGCTTCCGAGGTGCCAAAAAACGAAATTCATTTTTCGAAAAGATTAAAA
AGTTCCCGATCCAAGAACTTCACACGGAAGATTTCCTTTGCAGATGGGGA
AAAATTGCTGAAGTTTTTCCAGATCTCAAACTTTTGCATATCGATGGTGA
AGGAAGAAAGGAGCCACATACATTTCCAAAAGTTGTTGAAATTCGTAAGA
TCAAGGTCCCTATGGCTCTTTACTCGAAGCTATTTAGAGTAACAGACGAC
GATATGCAAATGCGATTCTTTTTGGAGAAAGGTTTAACATATAAATATAT
TTCCCAACTGGTTTTTGAGGAAGACGTCAACGCTGGTGAAACAATAGTAT
GGTCGCTTGAAGCTTTTAAACTTGCTGCCAAGATAACTTTCATTTCTAAA
GTTCAAGTGAACTGCCTAGACATCCAAAGTAGTTGTGACTTGAATGACTT
TCTTGATGACATATCAATGAACAAGAAAACAGAGCTTCACTTGCCGGCAA
TGAAGTATGGCATGTATAAATTTACTCGTCAAGATATTGAATCAATTGTA
AGCCGAGATATAAGAATTGTTAGCATCGATAGCAATTCTTTGAGTTTTGA
CGACACAAGTTCAGGGTTTGAACATTGGATTCCCATTCTAAACAAATTGA
AGTATTTAGAAgaattcattttgaatcatcCTGTTTCCTTTCAAGAAGAA
CTACCTCCAATCTCTTTACTGAAACACTTACCGATTCGAAAGATGAATAC
AAGTCATTTTAATTTCCATAAGGAAAGCATTCAAAATGTTGTTAAAACAA
TGCTGAAAATGAGACATCTGGAATCGGTTATTATTGATGAAGCCTCCAAT
TGGCACTGGGAATATAAGTTTTCACCTGACGAGATTCTCTTATTCAAATC
TTTACCAGTAAAATCGGTTAGTTTATACGCATTGAATCTAACCaaagaaa
atgttgaaatatttcgTCGGATCATCTGTGAAATCATGGAAATTGAAACG
ATCAAAGGATTTGATCAATTTGGTCGTTGTGAAGAGACTAAAGAACTTGG
CATTTCCAAAATCATGTCACGTGGACCTTTTGGAATCTTCAAAAGTATTT
AAACCACATGATCCGACAAGATTTGAtgcttttaaaggttttgtttttaa
agtgtcccccgtttc
Run BLAST on NCBI

protein sequence of TCONS_00059603-protein

>TCONS_00059603-protein ID=TCONS_00059603-protein|Name=TCONS_00059603-protein|organism=Clytia hemisphaerica|type=polypeptide|length=411bp
MDFNELPNELLKTIITFLDIKSAKNIASCSERMYDLALDRIWSKPRFRGA
KKRNSFFEKIKKFPIQELHTEDFLCRWGKIAEVFPDLKLLHIDGEGRKEP
HTFPKVVEIRKIKVPMALYSKLFRVTDDDMQMRFFLEKGLTYKYISQLVF
EEDVNAGETIVWSLEAFKLAAKITFISKVQVNCLDIQSSCDLNDFLDDIS
MNKKTELHLPAMKYGMYKFTRQDIESIVSRDIRIVSIDSNSLSFDDTSSG
FEHWIPILNKLKYLEEFILNHPVSFQEELPPISLLKHLPIRKMNTSHFNF
HKESIQNVVKTMLKMRHLESVIIDEASNWHWEYKFSPDEILLFKSLPVKS
VSLYALNLTKENVEIFRRIICEIMEIETIKGFDQFGRCEETKELGISKIM
SRGPFGIFKSI
Run BLAST on NCBI

transcript from alignment at scaffold_329:616545..623351-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059603 ID=TCONS_00059603|Name=TCONS_00059603|organism=Clytia hemisphaerica|type=transcript|length=6807bp|location=Sequence derived from alignment at scaffold_329:616545..623351- (Clytia hemisphaerica)
CCTTAATCGGGTTTGGAGGTTTTAACTGCTGTTTCTATGCTAGTTTCAAT
CAGTCGTTATTTTTCAGAATAAGATAGAAAAACAAACTTGGGCAGAGGGA
CACATTGAGCATTATTATGGATTTCAATGAATTACCTAATGAACTGCTGA
AAACAATCATCACATTTTTGGATATTAAAAGTGCAAAAAACATTGCATCA
TGCTCCGAGCGTATGTACGACCTGGCTTTAGATCGAATTTGGTCCAAGCC
ACGCTTCCGAGGTGCCAAAAAACGAAATTCATTTTTCGAAAAGATTAAAA
AGTTCCCGATCCAAGAACTTCACACGGAAGATTTCCTTTGCAGATGGGGA
AAAATTGCTGAAGTTTTTCCAGATCTCAAACTTTTGCATATCGATGGTGA
AGGAAGAAAGGAGCCACATACATTTCCAAAAGTTGTTGAAATTCGTAAGA
TCAAGGTCCCTATGGCTCTTTACTCGAAGCTATTTAGAGTAACAGACGAC
GATATGCAAATGCGATTCTTTTTGGAGAAAGGTTTAACATATAAATATAT
TTCCCAACTGGTTTTTGAGGAAGACGTCAACGCTGGTGAAACAATAGTAT
GGTCGCTTGAAGCTTTTAAACTTGCTGCCAAGTTTTATAAAATATCCCAT
CATGGACCATCACTTCAGGATTGCTCCCAAAGGGATAGAGAATGGTGTGA
TATTTCGGGAAATTTGCGATCGTTATCCTAATGCTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGAA
TGGTGGAATAATAGTAAATTATAGTAGAGAGAAATACTCTTACGTTGACT
TGGCGATTGTCAAGATAATAAATAATGACCAACGAGCGACAGCAACAGCA
ACCAAAAACGGTGACGATAGAATAGTAAAAAGTGACAACGGTGACAATAG
AATAGTAAAAAGTAGAAAATGACTTTAAAAAAACGATTTGATGGCTTTTT
CACTGGCGTGGATGCTTTTTGCAGGTTTTGTGCAAGTGAGTGATAGAAAT
TGAAAACAAAAAAAATTATTTGTATTGGATGTACCATTTATAAACAGAAA
CCAAGGAAACGAAGGAAATGAATATACTGCAATGTCCTCTTCTACTTTAC
TGTTGTTGCATTTTCCCGTAGCGAATTCCAGGAAGTTGTGGGTCGTTTGG
GAAAACTGGACGGAAGTAAGAGTGAAAGTGATGGTAAAGTATTGTTAGTG
TTGTTGTTTGGAGTAAATTGGGATTGGAAGTGCTCTAGACCGTGCTCTGG
TGCCGTTTAGATTTGGACTTTGGTCTTATGCTGAAAGAAATCAAGAAGGG
AAAATAAAAAGGGAGAAATCGAAAGTGAAAGGAGGGAGTGGCAGAAAAAA
TGTTGAAATAGAGGTCAGGATGATTTAGGATTGACAGAATATGGAGTGTG
TGAATGACCAGAATATAGTGTTGAAGTATAACTATTTGGAGTAAATTGAG
ATTAGAAGTATCATAGTGGGGTTCGAACTTGCTGTGCCAGAGGAAATCGA
GAAATCGAAAGTGAAAAAGAGAAATCGAAAGTGGAAGAGAGAAATCGAAA
GTGAAAGGACTGCAATCCAAGATGGCGAGGGGATGTAGAACATGGAGTGT
GTGGAAGACCAGAATTGTGCATTGGAGTGTTGCTATTTCGGAATCCTGAC
AGTTTGTCAAAGTTGTCCTGGTGGAGTTCGGACGTGTTGAAAGGGATTNG
CTATTTCGGAATCCTGACAGTTTGTCAAAGTTGTCCTGGTGGGGTTCGGA
CGTGTTGAAAGGGATTGAGAAATCGTTAAATCGAAAGTGAAAGGAGGAGT
TCGAGTGAGAATGAAAGAAGGTTGCAACAGAGGCCAAAATGATGAGGGGT
CAGCAGAGTGCGTAAGACCGGAAAATATGGTGAAAGAGTGTGACATGGGT
CACTGATTGGTATCGAACCCAGGCGATAGCGGTGAAAAATCCGACCGAGA
CCAACTGATTTTCACGTAGGGTACTTAGACAAAGATGTCGGGACAAGGGG
GGACAGCTTCTTTGTGTTGGGAGGGAGTGGAAACTTGTAGGCATGTAGGA
GAATAGTATGAAGCTTGAAAAATTAGTAGTAGAAAGGATGTTTGATCTTT
CTTCTGGTTTGGAAATTATCGATAAGATGATTATAAATGGATTGAAAGAA
TGAAGTATATAACATAATTAGGTTGACAAAATAAATAATTTTTAGGTCAA
ATGCCTGGTGATGTGGCTGTTGTTATAAATAAGTGTTATTGATAATTATT
GTAACAACTTGGTTGCAAACAAAGAGGCTTTTCGGAATACAAAGCAATAA
TTATGTTTCGTGATGTGAGGCAGATCTAATGACATATCTGTGTGAAACCC
AAGGGCAGTAAGAAACAATGAAAATGAGAAGCTATTTTTGATGTTCCTTA
GATGGAATGACCAAACAACAAACAAAAAATGATAGTCTGGGGAGGATTAG
AGCCTGGTCCGACGTGATCAAATGAGTAAGTGGATATGTTTGCAATCAGG
CATTTATAAAAATGTAATGAAAACTTTAAAACTTTATTCTGGAGCTCTCA
AATTTTTGTATCAGAGGAAGTGAGTTTAGTCCCTAGCGTCTTGTTGTTTT
TGTACACAGTGGTGGGTCTTTTAAGGATATTTGATAGATCAGCGTCCTGT
TCAATTGTTGACCAAGCATCTTGGATTTTGCTTTGGATGTTTTTGTCTCT
GTCATTGTGGAGGATGAGCGGTAGGATGTTCTTATTTTCATGTTGTTTGT
TGTCGTATAATAGGTTATGTCTGGTCTTGGTGAGCGCTTTCTTGATATTG
TCGTTGATGATACGGAGAGGGTAGCCACGGGCTAGGAGTATTTTGGATAG
GTTGTGGAGTTCATTGGTGAGAGTTTGAGAATCACTGATAATCATGTTGT
AGCGGAGGGCTTGGGAGTAGACAATACCTTCTTTTGTGTGTAAAGGGTGG
TTGGATTCAAAATGAAGGAGTTGAGAACGGTCAGTGGGTTTCCGGTAGAT
GCTTGTGGAAAATTGGTTGTTGGAAATGGTGATTTGGACATCTAGGAAAT
TGATAGTGGTTGGTGATTGATCAAAAGTGAATTTTATGGTGGGGTGTAGT
AAGTTCATGTATGATTTAAGTTCTGCCAGTTCTTCGTTGTTGCCTTTGAA
TATTATAAAGATATCATCTATAAAACGTCTCCATAGTAAAACGTTGTTGG
TGAATTCATTGATAATTTGTGTCTCTATTTTACCCATGAACAAGTTGGCG
TATTGTGGTGCGTAGCGTCCCCCCATTGTCGTGCCTGATTTTTGTAAATA
GTGCTTGTCCATAAATCTAAAGTTGCTGTTAGTGAGGATTGTGTCCAGTA
GGATTTTGATGGTAGTGGTGTTTGGAGCGTGGTCTGGTAGTAGTCTTCGG
TGATCAGTGTAGTACTCTGTTGTGGTGTTTAGTCCTTCGTCATGTGGGAT
GTTGGTGTAGAGAGATGTCACGTCAGCTGTTATCATGGTGATGTTGTCTA
GTGGTTCGTTCCAGGTGTCTAACAGTTGTAGGAAGTGTTTGGTGTCTTTC
AAATATGTAGGGAGGGATTCCACCAGTGGTTGCAGATAGTGTGCAAGATA
GCGTGATAGGTTGTCTGTGGGGCTGTCAAATCCGGATACTATTGGGCGAA
GGGGATTGTTGGTTTTGTGGATTTTAGGTAGGCCGTAAAAAATTGGAGTT
CTTGGTTGGTCAGGGGGTTGGAGGAATTTAGCGGTGGCGTTGTCGATATA
GTGTTTGAGAGTGAGGTATTGGATTGTTGTGCGTACGTCATAGGTAATTC
GTTGGGTTGGGTCGTCTTCTAGTTCTTGATAGGTGTCCGTGTTGTTGAGG
TGTTCTTTGTTGATTTTGTCAATGTAGTCTTTTTTGTTGAGGATGACCAA
ACCTCCTCCTTTGTCCGCTTTCTTTATGATGATGTTGTGGTTGTTTAAGA
GAGAGTTGTAAGGTGTCAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTAGGATAACGA
TCGCAAATTTCCCGAAATATCACACCATTCTCTATCCCTTTGGGAGCAAT
CCTGAAGTGATGGTCCATGATGGGATATTTTATAAAACACATGGTCGCTT
GAAGCTTTTAAACTTGCTGCCAAGATAACTTTCATTTCTAAAGTTCAAGT
GAACTGCCTAGACATCCAAAGTAGTTGTGACTTGAATGACTTTCTTGATG
ACATATCAATGAACAAGAAAACAGAGCTTCACTTGCCGGCAATGAAGTAT
GGCATGTATAAATTTACTCGTCAAGATATTGAATCAATTGTAAGCCGAGA
TATAAGAATTGTTAGCATCGATAGCAATTCTTTGAGTTTTGACGACACAA
GTTCAGGGTTTGAACATTGGATTCCCATTCTAAACAAATTGAAGTATTTA
GAAGAATTCATTTTGAATCATCCTGTTTCCTTTCAAGAAGAACTACCTCC
AATCTCTTTACTGAAACACTTACCGATTCGAAAGATGAATACAAGTCATT
TTAATTTCCATAAGGAAAGCATTCAAAATGTTGTTAAAACAATGCTGAAA
ATGAGACATCTGGAATCGGTTATTATTGATGAAGCCTCCAATTGGCACTG
GGAATATAAGTTTTCACCTGACGAGATTCTCTTATTCAAATCTTTACCAG
TAAAATCGGTTAGTTTATACGCATTGAATCTAACCAAAGAAAATGTTGAA
ATATTTCGTCGGATCATCTGTGAAATCATGGAAATTGAAACGATCAAAGG
ATTTGATCAATTTGGTCGTTGTGAAGAGACTAAAGAACTTGGCATTTCCA
AAATCATGTCACGTGGACCTTTTGGAATCTTCAAAAGTATTTAAACCACA
TGATCCGACAAGATTTGATGCTTTTAAAGGTTTTGTTTTTAAAGTGTCCC
CCGTTTC

Coding sequence (CDS) from alignment at scaffold_329:616545..623351-

>TCONS_00059603 ID=TCONS_00059603|Name=TCONS_00059603|organism=Clytia hemisphaerica|type=CDS|length=2472bp|location=Sequence derived from alignment at scaffold_329:616545..623351- (Clytia hemisphaerica)
ATGGTCGCTTGAAGCTTTTAAACTTGCTGCCAAGATAACTTTCATTTCTA
AAGTTCAAGTGAACTGCCTAGACATCCAAAGTAGTTGTGACTTGAATGAC
TTTCTTGATGACATATCAATGAACAAGAAAACAGAGCTTCACTTGCCGGC
AATGAAGTATGGCATGTATAAATTTACTCGTCAAGATATTGAATCAATTG
TAAGCCGAGATATAAGAATTGTTAGCATCGATAGCAATTCTTTGAGTTTT
GACGACACAAGTTCAGGGTTTGAACATTGGATTCCCATTCTAAACAAATT
GAAGTATTTAGAAGAATTCATTTTGAATCATCCTGTTTCCTTTCAAGAAG
AACTACCTCCAATCTCTTTACTGAAACACTTACCGATTCGAAAGATGAAT
ACAAGTCATTTTAATTTCCATAAGGAAAGCATTCAAAATGTTGTTAAAAC
AATGCTGAAAATGAGACATCTGGAATCGGTTATTATTGATGAAGCCTCCA
ATTGGCACTGGGAATATAAGTTTTCACCTGACGAGATTCTCTTATTCAAA
TCTTTACCAGTAAAATCGGTTAGTTTATACGCATTGAATCTAACCAAAGA
AAATGTTGAAATATTTCGTCGGATCATCTGTGAAATCATGGAAATTGAAA
CGATCAAAGGATTTGATCAATTTGGTCGTTGTGAAGAGACTAAAGAACTT
GGCATTTCCAAAATCATGTCACGTGGACCTTTTGGAATCTTCAAAAGTAT
TTAAATGGATTTCAATGAATTACCTAATGAACTGCTGAAAACAATCATCA
CATTTTTGGATATTAAAAGTGCAAAAAACATTGCATCATGCTCCGAGCGT
ATGTACGACCTGGCTTTAGATCGAATTTGGTCCAAGCCACGCTTCCGAGG
TGCCAAAAAACGAAATTCATTTTTCGAAAAGATTAAAAAGTTCCCGATCC
AAGAACTTCACACGGAAGATTTCCTTTGCAGATGGGGAAAAATTGCTGAA
GTTTTTCCAGATCTCAAACTTTTGCATATCGATGGTGAAGGAAGAAAGGA
GCCACATACATTTCCAAAAGTTGTTGAAATTCGTAAGATCAAGGTCCCTA
TGGCTCTTTACTCGAAGCTATTTAGAGTAACAGACGACGATATGCAAATG
CGATTCTTTTTGGAGAAAGGTTTAACATATAAATATATTTCCCAACTGGT
TTTTGAGGAAGACGTCAACGCTGGTGAAACAATAGTATGGTCGCTTGAAG
CTTTTAAACTTGCTGCCAAGATAACTTTCATTTCTAAAGTTCAAGTGAAC
TGCCTAGACATCCAAAGTAGTTGTGACTTGAATGACTTTCTTGATGACAT
ATCAATGAACAAGAAAACAGAGCTTCACTTGCCGGCAATGAAGTATGGCA
TGTATAAATTTACTCGTCAAGATATTGAATCAATTGTAAGCCGAGATATA
AGAATTGTTAGCATCGATAGCAATTCTTTGAGTTTTGACGACACAAGTTC
AGGGTTTGAACATTGGATTCCCATTCTAAACAAATTGAAGTATTTAGAAG
AATTCATTTTGAATCATCCTGTTTCCTTTCAAGAAGAACTACCTCCAATC
TCTTTACTGAAACACTTACCGATTCGAAAGATGAATACAAGTCATTTTAA
TTTCCATAAGGAAAGCATTCAAAATGTTGTTAAAACAATGCTGAAAATGA
GACATCTGGAATCGGTTATTATTGATGAAGCCTCCAATTGGCACTGGGAA
TATAAGTTTTCACCTGACGAGATTCTCTTATTCAAATCTTTACCAGTAAA
ATCGGTTAGTTTATACGCATTGAATCTAACCAAAGAAAATGTTGAAATAT
TTCGTCGGATCATCTGTGAAATCATGGAAATTGAAACGATCAAAGGATTT
GATCAATTTGGTCGTTGTGAAGAGACTAAAGAACTTGGCATTTCCAAAAT
CATGTCACGTGGACCTTTTGGAATCTTCAAAAGTATTTAAATGGATTTCA
ATGAATTACCTAATGAACTGCTGAAAACAATCATCACATTTTTGGATATT
AAAAGTGCAAAAAACATTGCATCATGCTCCGAGCGTATGTACGACCTGGC
TTTAGATCGAATTTGGTCCAAGCCACGCTTCCGAGGTGCCAAAAAACGAA
ATTCATTTTTCGAAAAGATTAAAAAGTTCCCGATCCAAGAACTTCACACG
GAAGATTTCCTTTGCAGATGGGGAAAAATTGCTGAAGTTTTTCCAGATCT
CAAACTTTTGCATATCGATGGTGAAGGAAGAAAGGAGCCACATACATTTC
CAAAAGTTGTTGAAATTCGTAAGATCAAGGTCCCTATGGCTCTTTACTCG
AAGCTATTTAGAGTAACAGACGACGATATGCAAATGCGATTCTTTTTGGA
GAAAGGTTTAACATATAAATATATTTCCCAACTGGTTTTTGAGGAAGACG
TCAACGCTGGTGAAACAATAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037490XLOC_037490Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059603-proteinTCONS_00059603-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059603-exon-scaffold_329-1575043694:622754..623351TCONS_00059603-exon-scaffold_329-1575043694:622754..623351Clytia hemisphaericaexon
TCONS_00059603-exon-scaffold_329-1575043694:616545..617361TCONS_00059603-exon-scaffold_329-1575043694:616545..617361Clytia hemisphaericaexon
TCONS_00059603-exon-scaffold_329-1510915933:622754..623351TCONS_00059603-exon-scaffold_329-1510915933:622754..623351Clytia hemisphaericaexon
TCONS_00059603-exon-scaffold_329-1510915933:616545..617361TCONS_00059603-exon-scaffold_329-1510915933:616545..617361Clytia hemisphaericaexon
TCONS_00059603-exon-scaffold_329-1491911889:622754..623351TCONS_00059603-exon-scaffold_329-1491911889:622754..623351Clytia hemisphaericaexon
TCONS_00059603-exon-scaffold_329-1491911889:616545..617361TCONS_00059603-exon-scaffold_329-1491911889:616545..617361Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:616545..623351 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.235342	0.0860607	0.0999247	0.0325869	0.2777	0.0313489	0.264748	0.389484	0.148738	0.214943	0.0894122	0	1.48692	1.54418	0.484426	0.860463	0.0662513	0.294257	0	0.0654471	0.199099	0.0832401	0.134919	0.0613305	0.063169	0.0845652	0.121013	0	0.097954	0.133066
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059603 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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