TCONS_00059614 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059614
Unique NameTCONS_00059614
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2199

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059614 ID=TCONS_00059614|Name=TCONS_00059614|organism=Clytia hemisphaerica|type=transcript|length=2199bp
CAAATTGCTCTCTCAAGATGGCAGTTTTATCTTTTACAAACAACGAAAAG
CTATCAATCTTTCAAAACCTGGTGTGGTATATTTAGCTGGTTACGGGTCT
GACTTGAATTGTAAGAAAGCCAAACATGTAGACCAGTATTGTGCAGAGAA
TGGTTTATCTTGTTTGAGATTTGATTATTCTGGTCATACTCATTCAAGTG
GAAATCTTGTAGATGCAACACTTTCATTATGGAAACAGAATTTTCTTGAC
ATTCTTGACAAATTAACAACAGGTTTAAAGAGTTTTCAGAAGACGAGAAA
AACACCATAAAGCAACAAGGGTATTGGATTGGCCCAAAAACAGGTTCTGT
ATTTGGGTACAACTTTTTACAAAGTTGTATTGATAATACGCTAATGACTG
TAAAGGAAAAGCAGATTCAAATCTATTGTCCCATTCGTATTTTACATGGA
ATGAGTGATGATGTAGTTCCATATCAAGTATCATTGAAACTTTCCAAAAT
GATTTCCAGTAATGATATTGAAGTTCATTTGGTGAAACATTTTGATCACA
TGATGAACTCTGATGAAGCCTTGGCATTGTTGAGCAAAGTTTTAGACGAA
ATGGTTAAGGTTGGTTTGGATTCTGATGTTTATTTACAAGCACCTTCTAA
GCTTTGATTATTCCTAATTATCATGAAAGGGTACACAATGTGATCTGTAG
AGAAATATGCAGCATATTTCTCAACTTAGAACCTTGatgaaaggttttgt
ttttaaataagagtgataaagtttgctttctcatcatttttaattcacaa
gcttttcatATTgtattgacacggatgtggagcaagactggtcagaaaga
ggaaaagaaaaacattttttcgcttatatcagcataatataacaaaaggc
agacactgccctgatatgaaataaTGGGTTTGATATAAAACGAAAACACT
TatgcaaaaataaaacctttaacgatTACAAGTGATGATAAAATcattaa
ttcatttttagaaaaatcaagaaatcattttaaatttcaaaaaagaatca
aTCTGAACAATCAATGAAATGCGTGATTGATTAAGAATGTCAATTGAAGG
GAGATTAGAACTGGAAAATGGAGATTATATCCATTATATCCAGCGAAAAA
GCCAAAACTTTACCAGACATGGGATTATTTATGTACATGGTTATGAATCC
CACTCTAATTGCCGACAAGCTAGATTTCTAGACAAATTTTGTACTGACAA
TGGTTTATCTTTTGTAAGATTTGATTTTTATGGTCATGGAAAATCGAGTG
GTACCTTATATGATTTGACGTTAtctaaaatgaaacaaaattttcttgat
GTTTTGGATAAGTTAACTCAGGGCCCACAAATCATCATTGGTTTTAGTAT
TGGCGGTTTGGTTTCATTTGTTGGAGCCTTGGAACGACCAGAGAGAATCC
ATAGcattatttcaatttcaaatgcTGCTGATGCAACTTACAACAACTTT
CATATTCACAGAACTGATGAAGAGAGACAAATGGTCAAAGATAAAGGTTA
CTTCATGAGCAGAGTAAATCATGTTGTTTGTTATGACTTGTGCATTGACA
GTAAAAACCACTTACTCGTGCACGACTCTGTTAAAGAAATCGCCCTGAAT
TGTCCTATACGTTTCTTGCATGGTATGTCTGATACAACTATACATTGGAA
AGTCTCTGTGGCGTTAGCCAAGAAGGTTGTTAGTCAAGATGTCAAAGTTC
AACTGGTGAAAACAGCAAAACATGGATTTAATTCTAAAAACGAGTTGAAT
ATACTGAAAGAGACTTTGAATGAATTGGTTGGAATGGATAGCCATAAATC
TAAATTGTAAAAGTATTGTAATGCTAATaatatgattttcaaatttacat
atttttcccatttttcttttttctttttgatggtttccttcactaagCAT
TGCGCTGTAGTTTTGATGAAGATGATAAATTATTCtatacatatttttaa
aattttaagctGCAACCAGTAATATCAATTAggtattattgttttttttt
acaaaaagcaAACCAAATCATTTATCGAATTTGGCTCTAACCTTTAGATC
TAATTAAAAGAGTacaatattttatcatttaaaatctccaaaaattgtaa
ataaatGAATATGAATAGACAAACTTTCACGTCAACGATTGAAGATGAC
Run BLAST on NCBI

protein sequence of TCONS_00059614-protein

>TCONS_00059614-protein ID=TCONS_00059614-protein|Name=TCONS_00059614-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MSIEGRLELENGDYIHYIQRKSQNFTRHGIIYVHGYESHSNCRQARFLDK
FCTDNGLSFVRFDFYGHGKSSGTLYDLTLSKMKQNFLDVLDKLTQGPQII
IGFSIGGLVSFVGALERPERIHSIISISNAADATYNNFHIHRTDEERQMV
KDKGYFMSRVNHVVCYDLCIDSKNHLLVHDSVKEIALNCPIRFLHGMSDT
TIHWKVSVALAKKVVSQDVKVQLVKTAKHGFNSKNELNILKETLNELVGM
DSHKSKL
Run BLAST on NCBI

transcript from alignment at scaffold_329:722976..728260-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059614 ID=TCONS_00059614|Name=TCONS_00059614|organism=Clytia hemisphaerica|type=transcript|length=5285bp|location=Sequence derived from alignment at scaffold_329:722976..728260- (Clytia hemisphaerica)
CAAATTGCTCTCTCAAGATGGCAGTTTTATCTTTTACAAACAACGAAAAG
CTATCAATCTTTCAAAACCTGGTGTGGTATATTTAGCTGGTTACGGGTCT
GACTTGAATTGTAAGAAAGCCAAACATGTAGACCAGTATTGTGCAGAGAA
TGGTTTATCTTGTTTGAGATTTGATTATTCTGGTCATACTCATTCAAGTG
GAAATCTTGTAGATGCAACACTTTCATTATGGAAACAGAATTTTCTTGAC
ATTCTTGACAAATTAACAACAGGTGATTAAAATTTAGCTATCTATTGGGC
TCTTTTGCTCTGTCCGGGGGGCCAAAAGTTACTTTGTCCGGGAGGTAAAT
CACTGAAAATTGTTATATCCTCCACCCCCCCATATTCAAATTATTTCTGG
AATAGCCCATTGCAAGATTTATTCAATTTATAATTTTTGGTGTGTATAAC
ATTATAAAGAAAGTGAAGCTAGAAATTAGATTCTTTCTAACGTTTAAATG
CAGTAAATTTAAATTCTCTTTTACTGTTTGAATATCTTAAATTCATCCAA
AAAAGTGTATTTTCTATCCATGTCCGCAGATCATTGTTTGCTCAAGCATG
GGGTGTTGGGTGGCTATACTTGGCACTCTTGATCGACTAAATCGAATTCA
TAGTATAATCTCAATTGCAAGTGCTGTTGATACAATGTACCATAGGTTAG
CTCATATAAAAGCAATTAATATTTTTTAGTTTGCACAGATTTTGAATCTA
GTTGCCCTAAACTTATTTTCCAAGTTATTAGCTTCTTTTAACACTGTAAA
AAAATTGATATATTCAAAAGTTTAACACAAAGAACACGCTCTGCCTTTAG
GTTTAAAGAGTTTTCAGAAGACGAGAAAAACACCATAAAGCAACAAGGGT
ATTGGATTGGCCCAAAAACAGGTTCTGTATTTGGGTACAACTTTTTACAA
AGTTGTATTGATAATACGCTAATGACTGTAAAGGAAAAGCAGATTCAAAT
CTATTGTCCCATTCGTATTTTACATGGAATGAGTGATGATGTAGTTCCAT
ATCAAGTATCATTGAAACTTTCCAAAATGATTTCCAGTAATGATATTGAA
GTTCATTTGGTGAAACATTTTGATCACATGATGAACTCTGATGAAGCCTT
GGCATTGTTGAGCAAAGTTTTAGACGAAATGGTTAAGGTTGGTTTGGATT
CTGATGTTTATTTACAAGCACCTTCTAAGCTTTGATTATTCCTAATTATC
ATGAAAGGGTACACAATGTGATCTGTAGAGAAATATGCAGCATATTTCTC
AACTTAGAACCTTGATGAAAGGTTTTGTTTTTAAATAAGAGTGATAAAGT
TTGCTTTCTCATCATTTTTAATTCACAAGCTTTTCATATTGTATTGACAC
GGATGTGGAGCAAGACTGGTCAGAAAGAGGAAAAGAAAAACATTTTTTCG
CTTATATCAGCATAATATAACAAAAGGCAGACACTGCCCTGATATGAAAT
AATGGGTTTGATATAAAACGAAAACACTTATGCAAAAATAAAACCTTTAA
CGATTACAAGTGATGATAAAATCATTAATTCATTTTTAGAAAAATCAAGA
AATCATTTTAAATTTCAAAAAAGAATCAATCTGAACAATCAATGAAATGC
GTGATTGATTAAGAATGTCAATTGAAGGGAGATTAGAACTGGAAAATGGA
GATTATATCCATTATATCCAGCGAAAAAGCCAAAACTTTACCAGACATGG
GATTATTTATGTACATGGTTATGAATCCCACTCTAATTGCCGACAAGCTA
GATTTCTAGACAAATTTTGTACTGACAATGGTTTATCTTTTGTAAGATTT
GATTTTTATGGTCATGGAAAATCGAGTGGTACCTTATATGATTTGACGTT
ATCTAAAATGAAACAAAATTTTCTTGATGTTTTGGATAAGTTAACTCAGG
GTAATGTATTCTCATTATTTTTCAAGGTTTTGTTGGGGGTCATAATCAAA
GGCGTCCAAAGTCGTTATAAGAGCATAATCATTTCTGATTATTCACGTTA
AAAAGTCGGTTAGTGTAAAACACAGGTCACAGGTCACAGGTCACGGGTCA
CAGGTCACGGGTCACAGGTCACAGGTCATACAAATTACAGACCGGAAAAC
TGTAACGCACTCGTAACATACAACCCATAACATACAACTCATAACAAAAG
TTTCTGAAAATATTATATGTAAAGGAAATGTAATATCAAAATATGGTATT
TAGAAGACTTAAACGACAAATCATCAACCCCAAAAATTGACAACAAATGA
CACCTAAATTATGTAAATAATGATGTTATCTCAAAGTATGAGGTTTTGTA
CACCAATTAACAATAAAATATTTATCATGCGTAATAGGATGCCGACGCTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACATTT
ATAAAATATAATCCCATTGACGCTATTTTCATCAATTCTTGTTATCATAC
CCAAGGTGATGCAGGAGATAAAATGAGATATGACATTAGTGATCGTGAAA
TAGCTATTTTCCTGTTAGGAGCTGTTTAAGGCAAAGGTGAGATCGATATT
CGAATATTTCTTTATTCTTTGTATATAACATTCGTAACATGCGTATAACA
TTGAAAAGATAACTTTTTTGCATGTGTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTT
TTGCATGTGTGATATAGATGTAATATATAATACAAGTATTACAGGTCCGT
GTTATACACGGCATAAAACGCAAAATCACGTGGTAAGCACGTGGGTAGAA
TTTTAGCTTTAAAATAGTTCTAGATCAATAAAATACCTTTGGAATTATAT
CATTGACATTAACAACTGTTTTTCAAACATTTTCTTTGTGTTTTACAGTA
ATCAAAGCTGACCTGTCAACACTGACCTGTGACCTGTGACCTGCGTTTTA
CACTAACCGTTAAAAAGTGGTTTCAAAATGATCTTAATAGACTGGTTCCA
TGTGGCCTCATTTTCACCAACAATTAGCCATTTTTCTAGGACATGGTAGA
AAGAATATGTACATGATGATTCAGTAAAACCTTGATAGCTCAAAGTCTTA
TAATATTTTTCCATTTGGAAATAAAGTTTTTTGTTTGTTTGTAGGTGAAA
TTTATATCAATAAGGAACAGATAGCTTGCGTGAGGTTTACTTGAAGATAC
TCCATAACTGGATTTTGCCGATCCGGTTTATAGGTATCAATTTCTGTAAA
AGTGCGCGAAATAACACAAACATTATTATTTTAGGCCCACAAATCATCAT
TGGTTTTAGTATTGGCGGTTTGGTTTCATTTGTTGGAGCCTTGGAACGAC
CAGAGAGAATCCATAGCATTATTTCAATTTCAAATGCTGCTGATGCAACT
TACAACAAGTAGGAATCGCCTTCAACACCCCTGTGACACAGACCTGCTGG
GACCCCTACCCCCACTTGATAATTTTGCCAAAACTTTAACCCATTGGGAA
ATTGACTTTGGTCTTATCCCCCATTTGAAATTCAAGGGAAAGAATTGCAC
TCAAAAGAACACCTACTGGATTTTTTCGACTTTGGAACAATAGAATTTCT
ATCCCAATTGAGATTTTGATAGAAATTTTCATCCCCACTGTAAGAAAAAT
TCTCATTGTGAGAAAACTTCTTACAGGGACTGCGAGACAATTTATTATTC
AACAAAAAGACAAATTATACTTTCTACCAGGCCCAAATACATTTTTTTTG
TTGAATAATAAATCCCAAAACTTACCAATACCGAGTTTATTTTCACAATT
AAAGGAGATCTTGAAAATTAATTTCAAAGATAATTAATAAAAATGTGTTT
TTGAAAAGAGGGACTAATCAATTCATGTGAATTATGAGGAATAAATTTCA
TTCTCTCTTGGTTTTTTTTTTGACAAAATGTAAAGAAGTAGAGCCTTGTG
GCGAGTATCTCTTCCACACTTTCTTAATTTTTTAGAACTGGATAATTTTA
AATGGAAAATTTCTGGAGGATATCGACGCTGTAATCGTGTCGTACTTTCA
TTGGGCTTGCTATTCCAGAAAAATTTGTACCCCTAATGTTGTGGAGGTTT
TTTTTGGGAAAGGTGACCTCCTGGATTTTTTCAAGTATCAAGCCCTCCTT
GGATTATTTTTCTCATTTTGTGGACCACCTTGGATTTTTTACCTCGTTTT
ACTGACCACCCTGGATTTTACACCTCATTTTACTGACCAAAACGAAAATT
TGAAAAAGGAACAAATTTCATATGATACTTTCTTGTTTCATAGCTTTCAT
ATTCACAGAACTGATGAAGAGAGACAAATGGTCAAAGATAAAGGTTACTT
CATGAGCAGAGTAAATCATGTTGTTTGTTATGACTTGTGCATTGACAGTA
AAAACCACTTACTCGTGCACGACTCTGTTAAAGAAATCGCCCTGAATTGT
CCTATACGTTTCTTGCATGGTATGTCTGATACAACTATACATTGGAAAGT
CTCTGTGGCGTTAGCCAAGAAGGTTGTTAGTCAAGATGTCAAAGTTCAAC
TGGTGAAAACAGCAAAACATGGATTTAATTCTAAAAACGAGTTGAATATA
CTGAAAGAGACTTTGAATGAATTGGTTGGAATGGATAGCCATAAATCTAA
ATTGTAAAAGTATTGTAATGCTAATAATATGATTTTCAAATTTACATATT
TTTCCCATTTTTCTTTTTTCTTTTTGATGGTTTCCTTCACTAAGCATTGC
GCTGTAGTTTTGATGAAGATGATAAATAGACTTTGTGAACTTACTAAAAC
TTTTAACGCCACACATTATTCTATACATATTTTTAAAATTTTAAGCTGCA
ACCAGTAATATCAATTAGGTATTATTGTTTTTTTTTACAAAAAGCAAACC
AAATCATTTATCGAATTTGGCTCTAACCTTTAGATCTAATTAAAAGAGTA
CAATATTTTATCATTTAAAATCTCCAAAAATTGTAAATAAATGAATATGA
ATAGACAAACTTTCACGTCAACGATTGAAGATGAC

Coding sequence (CDS) from alignment at scaffold_329:722976..728260-

>TCONS_00059614 ID=TCONS_00059614|Name=TCONS_00059614|organism=Clytia hemisphaerica|type=CDS|length=2322bp|location=Sequence derived from alignment at scaffold_329:722976..728260- (Clytia hemisphaerica)
CTTTCATATTCACAGAACTGATGAAGAGAGACAAATGGTCAAAGATAAAG
GTTACTTCATGAGCAGAGTAAATCATGTTGTTTGTTATGACTTGTGCATT
GACAGTAAAAACCACTTACTCGTGCACGACTCTGTTAAAGAAATCGCCCT
GAATTGTCCTATACGTTTCTTGCATGGTATGTCTGATACAACTATACATT
GGAAAGTCTCTGTGGCGTTAGCCAAGAAGGTTGTTAGTCAAGATGTCAAA
GTTCAACTGGTGAAAACAGCAAAACATGGATTTAATTCTAAAAACGAGTT
GAATATACTGAAAGAGACTTTGAATGAATTGGTTGGAATGGATAGCCATA
AATCTAAATTGTAAGCCCACAAATCATCATTGGTTTTAGTATTGGCGGTT
TGGTTTCATTTGTTGGAGCCTTGGAACGACCAGAGAGAATCCATAGCATT
ATTTCAATTTCAAATGCTGCTGATGCAACTTACAACAAATGTCAATTGAA
GGGAGATTAGAACTGGAAAATGGAGATTATATCCATTATATCCAGCGAAA
AAGCCAAAACTTTACCAGACATGGGATTATTTATGTACATGGTTATGAAT
CCCACTCTAATTGCCGACAAGCTAGATTTCTAGACAAATTTTGTACTGAC
AATGGTTTATCTTTTGTAAGATTTGATTTTTATGGTCATGGAAAATCGAG
TGGTACCTTATATGATTTGACGTTATCTAAAATGAAACAAAATTTTCTTG
ATGTTTTGGATAAGTTAACTCAGGCTTTCATATTCACAGAACTGATGAAG
AGAGACAAATGGTCAAAGATAAAGGTTACTTCATGAGCAGAGTAAATCAT
GTTGTTTGTTATGACTTGTGCATTGACAGTAAAAACCACTTACTCGTGCA
CGACTCTGTTAAAGAAATCGCCCTGAATTGTCCTATACGTTTCTTGCATG
GTATGTCTGATACAACTATACATTGGAAAGTCTCTGTGGCGTTAGCCAAG
AAGGTTGTTAGTCAAGATGTCAAAGTTCAACTGGTGAAAACAGCAAAACA
TGGATTTAATTCTAAAAACGAGTTGAATATACTGAAAGAGACTTTGAATG
AATTGGTTGGAATGGATAGCCATAAATCTAAATTGTAAGCCCACAAATCA
TCATTGGTTTTAGTATTGGCGGTTTGGTTTCATTTGTTGGAGCCTTGGAA
CGACCAGAGAGAATCCATAGCATTATTTCAATTTCAAATGCTGCTGATGC
AACTTACAACAAATGTCAATTGAAGGGAGATTAGAACTGGAAAATGGAGA
TTATATCCATTATATCCAGCGAAAAAGCCAAAACTTTACCAGACATGGGA
TTATTTATGTACATGGTTATGAATCCCACTCTAATTGCCGACAAGCTAGA
TTTCTAGACAAATTTTGTACTGACAATGGTTTATCTTTTGTAAGATTTGA
TTTTTATGGTCATGGAAAATCGAGTGGTACCTTATATGATTTGACGTTAT
CTAAAATGAAACAAAATTTTCTTGATGTTTTGGATAAGTTAACTCAGGCT
TTCATATTCACAGAACTGATGAAGAGAGACAAATGGTCAAAGATAAAGGT
TACTTCATGAGCAGAGTAAATCATGTTGTTTGTTATGACTTGTGCATTGA
CAGTAAAAACCACTTACTCGTGCACGACTCTGTTAAAGAAATCGCCCTGA
ATTGTCCTATACGTTTCTTGCATGGTATGTCTGATACAACTATACATTGG
AAAGTCTCTGTGGCGTTAGCCAAGAAGGTTGTTAGTCAAGATGTCAAAGT
TCAACTGGTGAAAACAGCAAAACATGGATTTAATTCTAAAAACGAGTTGA
ATATACTGAAAGAGACTTTGAATGAATTGGTTGGAATGGATAGCCATAAA
TCTAAATTGTAAGCCCACAAATCATCATTGGTTTTAGTATTGGCGGTTTG
GTTTCATTTGTTGGAGCCTTGGAACGACCAGAGAGAATCCATAGCATTAT
TTCAATTTCAAATGCTGCTGATGCAACTTACAACAAATGTCAATTGAAGG
GAGATTAGAACTGGAAAATGGAGATTATATCCATTATATCCAGCGAAAAA
GCCAAAACTTTACCAGACATGGGATTATTTATGTACATGGTTATGAATCC
CACTCTAATTGCCGACAAGCTAGATTTCTAGACAAATTTTGTACTGACAA
TGGTTTATCTTTTGTAAGATTTGATTTTTATGGTCATGGAAAATCGAGTG
GTACCTTATATGATTTGACGTTATCTAAAATGAAACAAAATTTTCTTGAT
GTTTTGGATAAGTTAACTCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037497XLOC_037497Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059614-proteinTCONS_00059614-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059614-exon-scaffold_329-1575043694:727989..728260TCONS_00059614-exon-scaffold_329-1575043694:727989..728260Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1575043694:726311..727410TCONS_00059614-exon-scaffold_329-1575043694:726311..727410Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1575043694:724603..724726TCONS_00059614-exon-scaffold_329-1575043694:724603..724726Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1575043694:723236..723717TCONS_00059614-exon-scaffold_329-1575043694:723236..723717Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1575043694:722976..723196TCONS_00059614-exon-scaffold_329-1575043694:722976..723196Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1510915933:727989..728260TCONS_00059614-exon-scaffold_329-1510915933:727989..728260Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1510915933:726311..727410TCONS_00059614-exon-scaffold_329-1510915933:726311..727410Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1510915933:724603..724726TCONS_00059614-exon-scaffold_329-1510915933:724603..724726Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1510915933:723236..723717TCONS_00059614-exon-scaffold_329-1510915933:723236..723717Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1510915933:722976..723196TCONS_00059614-exon-scaffold_329-1510915933:722976..723196Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1491911889:727989..728260TCONS_00059614-exon-scaffold_329-1491911889:727989..728260Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1491911889:726311..727410TCONS_00059614-exon-scaffold_329-1491911889:726311..727410Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1491911889:724603..724726TCONS_00059614-exon-scaffold_329-1491911889:724603..724726Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1491911889:723236..723717TCONS_00059614-exon-scaffold_329-1491911889:723236..723717Clytia hemisphaericaexon
TCONS_00059614-exon-scaffold_329-1491911889:722976..723196TCONS_00059614-exon-scaffold_329-1491911889:722976..723196Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_329supercontigscaffold_329:722976..728260 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.294914	4.47986	5.72913	6.67808	1.69162	2.27454	1.87232	1.72478	2.48411	2.31746	0.000140834	0.828542	0.816691	0.3055	0.638605	0.714712	2.4277	1.10902	0.7515	1.5548	2.00514	1.50094e-08	4.5373	5.77918	0	0	0.798148	0	2.05007	2.77263
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
Blast
[Close]
BLAST of TCONS_00059614 vs. Swiss-Prot (Human)
Match: ABHDA (Mycophenolic acid acyl-glucuronide esterase, mitochondrial OS=Homo sapiens GN=ABHD10 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.091e-33
Identity = 76/226 (33.63%), Postives = 128/226 (56.64%), Query Frame = 1 
Query: 1171 GIIYVHGYESHSNCRQARFLDKFCTDNGLSFVRFDFYGHGKSSGTLYDLTLSKMKQNFLDVLDKLTQGPQIIIGFSIGGLVSFVGALERPERIHSIISISNAADATYNNFHIHRTDEERQMVKDKGYFMSRVNHV------VCYDLCIDSKNHLLVHDSVKEIALNCPIRFLHGMSDTTIHWXXXXXXXXXXXXQDVKVQLVKTAKHGFNSKNELNILKETLNELV 1830
            GII++ GY S+ N  +A  +++FC   G + +RFD+ G G S G   + TL K +++ L ++D L  GPQI++G S+GG +    A+ RPE++ ++I ++ AAD     F+     E ++ V+ KG +     +       V Y    ++++H L+H     I +NCPIR LHGM D  + W  S+ +A +V+S DV V L K + H    K ++ +L  T+++L+
Sbjct:   77 GIIFIPGYLSYMNGTKALAIEEFCKSLGHACIRFDYSGVGSSDGNSEESTLGKWRKDVLSIIDDLADGPQILVGSSLGGWLMLHAAIARPEKVVALIGVATAADTLVTKFN-QLPVELKKEVEMKGVWSMPSKYSEEGVYNVQYSFIKEAEHHCLLHSP---IPVNCPIRLLHGMKDDIVPWHTSMQVADRVLSTDVDVILRKHSDHRMREKADIQLLVYTIDDLI 298

HSP 2 Score: 70.4774 bits (171), Expect = 1.153e-25
Identity = 36/118 (30.51%), Postives = 63/118 (53.39%), Query Frame = 1 
Query:  268 NRFKEFSEDEKNTIKQQGYWIGPKTGSVFG-----YNFLQSCIDNTLMTVKEKQIQIYCPIRILHGMSDDVVPYQVSLKLSKMISSNDIEVHLVKHFDHMMNSDEALALLSKVLDEMV 606
             +F +   + K  ++ +G W  P   S  G     Y+F++    + L+      I + CPIR+LHGM DD+VP+  S++++  + S D++V L KH DH M     + LL   +D+++
Sbjct:  184 TKFNQLPVELKKEVEMKGVWSMPSKYSEEGVYNVQYSFIKEAEHHCLL---HSPIPVNCPIRLLHGMKDDIVPWHTSMQVADRVLSTDVDVILRKHSDHRMREKADIQLLVYTIDDLI 298

HSP 3 Score: 65.855 bits (159), Expect = 1.153e-25
Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 2 
Query:   68 PGVVYLAGYGSDLNCKKAKHVDQYCAENGLSCLRFDYSGHTHSSGNLVDATLSLWKQNFLDILDKLTTG 274
            PG++++ GY S +N  KA  ++++C   G +C+RFDYSG   S GN  ++TL  W+++ L I+D L  G
Sbjct:   76 PGIIFIPGYLSYMNGTKALAIEEFCKSLGHACIRFDYSGVGSSDGNSEESTLGKWRKDVLSIIDDLADG 144
The following BLAST results are available for this feature:
BLAST of TCONS_00059614 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABHDA2.091e-3333.63Mycophenolic acid acyl-glucuronide esterase, mitoc... [more]
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