TCONS_00059780 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059780
Unique NameTCONS_00059780
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2095

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059780 ID=TCONS_00059780|Name=TCONS_00059780|organism=Clytia hemisphaerica|type=transcript|length=2095bp
GTcgcatatatattttttgttatttttcttgttttgttgGCAAATTTGTt
agatctttttcaaaaacgatTATAGAAAAAGGCTTACCATGATCGCACAA
AAGTAAAAATTGGTCATAAGTGACACAAGTAGGGAATGAcgattttaaag
aatttttaagcAGAAAAAATTGAGCGATTTCTACATTTATTCTTTATTCA
ATATTGCTCTCTAATTCTAGAAATTattaatattttgaattttttgttgt
aCGAAAGatggcatttttttgtccgtatGGTTCAAAGGGTAACAAAGAAG
CAGCTCCCAAGCCCATCCCTCATGACGCCTATCAACGCAACAGAGAATAT
GATGACCTCGAAGATAACCTAGATAGGCTATCATTAAAAGAAAACAGAAC
ACACCAAACTTCACTTATGATCGTTGTTGAAGACTATTATCCTTGTTCTG
CTCTAGAACTTCCCGTACGTAAAGGCGAAATCGTACAATATATACAAAGT
GAAGGCGTGTGGACGTACGTGCGTGCACGGAACGGAGCAGACGGTTACAT
CCCACGCCGTCATTGTTGTTTAGTGGATCCTGCAGAACTTTCAGATGTTG
GTTATTTTTCGGATCACCAAAATTGGGAGAGAGTTTCTCCACCGTCAACG
GGTAATAGTCGCACGTCATCTTTCCAACGAGATTCGCCCCGTAGCGTACG
TTTCGTAGGGGCAAATATTAACCGTGATGGAAGCTTTAGCTTTAGTTCCA
CGACAAGTAGTCTATCAAGTTCATCACCAAAAAGCTTAGTAGTAGAGCCT
CTTAAACGAAGAAGCGGACTTTATACTGATGGCCCACATGTTGATAATAA
TAGACTGTTCGATCGAACACCAAAACAACTACGTAAAAACACTGCCCTGA
TGAATGAAGATATGCGACCAGTTTGTGGCCGTAAATGCGGTGAGAATTGC
GAGCATAAAAATGCACTTAAGAAAGATAGAACTTTCTCACAAACATCTCA
GATTAGTGGGCAATCGAGTAAAAGTCGAGCTGATTCTGACACCAGACCGC
GTTCTACATCTTCAAaccaaaaattaaagaaatcctCGGTTATAAGCGTT
TCAactaaaaacataaacaaaagtgTCTCATTCAATGAGATTAAAACAAA
GAGCTCACAACTCAAAGAGATTAAAACACAGAGCTCACAACTCATCTTTG
ACGATGTAGACGGTAGACCGAAAACACCAAcagaaaaatcatattttgag
CTGCCACATACAAAATGTGGTCATCCTGAACTGATTATTATTCAAAAACA
TAATAAGAAAAGTGAAACGGATATTTCAGTGGATAGAGGAGATTATGCCG
CCATTATTAATGATACGAAATATGACGATTGGATGTATATAGTCAATGAA
GCTGGCGAGAGAGGCTTTATACCTAAAAATTGCGCCATCAAACACGAATG
CCACGATTGTCAAGAAAACGCGACAACTCCTGTCAACGAAAACCCCAACA
AACCATTTGGAAGCGAAACACTTCCATCACCAAGATCACCTACAGATGAT
AAACCGGTATACACAACAGAAGATTTCAAAACAATGAGACAGTTAGTGAT
CACGAAAGATTATTCTGGTCACAGTCTTGATGATTTGTATGTTTGTATTG
GTGATATTGTTTACATGAGTCCTGATGAGCAGTCTGGTGACGAGTGGTTG
TGGGTTCACTCACTGAAATTGAATTCGTCAGGTTATATTCCGATTTGTGT
TAGCAAGGATATGATGTTGATCCAAAAAGCATCTGTATAATTGTTTCATT
ATTCATGAGAAATTTCATACTTGGCTTGAGTAGACTCGGGAGAAGAACTA
ATGTCGCCAGGCGTTTTTTTCCCTTCACGACCTTGTTTAAAACTTCAACT
TGTGAAAGTCTTGAACTTCATTCCTACTTCTCACAGAAATAACGAATCAA
AACTCGAAGGGGATTGACATTCCCATTTTTTATGGctagggatttgaatt
ccattgttttcaagtcagaaaactATTCTTTCAGCGGGGAAAAGATAGGA
GAATAATTTTCAACTGGGGCGATATTTGGCCGATTTAGATCCCAC
Run BLAST on NCBI

protein sequence of TCONS_00059780-protein

>TCONS_00059780-protein ID=TCONS_00059780-protein|Name=TCONS_00059780-protein|organism=Clytia hemisphaerica|type=polypeptide|length=510bp
MAFFCPYGSKGNKEAAPKPIPHDAYQRNREYDDLEDNLDRLSLKENRTHQ
TSLMIVVEDYYPCSALELPVRKGEIVQYIQSEGVWTYVRARNGADGYIPR
RHCCLVDPAELSDVGYFSDHQNWERVSPPSTGNSRTSSFQRDSPRSVRFV
GANINRDGSFSFSSTTSSLSSSSPKSLVVEPLKRRSGLYTDGPHVDNNRL
FDRTPKQLRKNTALMNEDMRPVCGRKCGENCEHKNALKKDRTFSQTSQIS
GQSSKSRADSDTRPRSTSSNQKLKKSSVISVSTKNINKSVSFNEIKTKSS
QLKEIKTQSSQLIFDDVDGRPKTPTEKSYFELPHTKCGHPELIIIQKHNK
KSETDISVDRGDYAAIINDTKYDDWMYIVNEAGERGFIPKNCAIKHECHD
CQENATTPVNENPNKPFGSETLPSPRSPTDDKPVYTTEDFKTMRQLVITK
DYSGHSLDDLYVCIGDIVYMSPDEQSGDEWLWVHSLKLNSSGYIPICVSK
DMMLIQKASV
Run BLAST on NCBI

transcript from alignment at scaffold_331:117739..121511+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059780 ID=TCONS_00059780|Name=TCONS_00059780|organism=Clytia hemisphaerica|type=transcript|length=3773bp|location=Sequence derived from alignment at scaffold_331:117739..121511+ (Clytia hemisphaerica)
GTcgcatatatattttttgttatttttcttgttttgttgGCAAATTTGTt agatctttttcaaaaacgatTATAGAAAAAGGCTTACCATGATCGCACAA AAGTAAAAATTGGTCATAAGTGACACAAGTAGGGAATGAcgattttaaag aatttttaagcAGAAAAAATTGAGCGATTTCTACATTTATTCTTTATTCA ATATTGCTCTCTAATTCTAGAAATTattaatattttgaattttttgttgt aCGAAAGatggcatttttttgtccgtatGGTTCAAAGGGTAACAAAGGTG AGGAAagattgttgtttttgttttcctcAAGATTCCATGGCAACTCTACG AAAATATCTTCGTCACCCAAATTCTGGTATCAAGATTTTGGATGATAAAG CTTTATGTGTCGAAGGGGCCCATGTTAACAAGCATTTAGTTTCTAACATG CACCCATGTATCACCCGGTTGGGCCCCACATCAACTGGAACATTTGGTCA AATTTCTTTCCCTGTGGGAGAAATACCcttacaatttcagccccactgga aaattgactttgatttcatcctctTACGAAATTCAATGTAAAGAAATTGC ATTCCAAAACCACCTCATACCATCACTTTTGAGCTTGGAACAAAATCGAA CAAttccaccagggctgtgagacaggtgtGTCTTTATTAATTTCGCACAA CAAGAGTATTGTGGTAGCCTTACCAAATCAACTCTTTATTAGAGAtgata tacttttcggtaattacttagttctttaaaaataaacCTTAAAAGTATTA TTAATAATCATAATTCATTTCATTCCATCCTTCAAATCCTATGCAAGTAT AtttggcgaaattttcgacaTTAAGTTGTTTTGTTATATCTTCTTATATC TGTCTAACAGTTACGGGCTAATTTACCGTCGGGTAGGAATCATAGTCAAC CTTTGATTTGTGATATCCTcaatgaaaatttttccgaccttTTTCGGGAG AGATTTTCTGCATTGATTGTCTGATAAGCCAATATATACTGTATTTTTAG AAGCAGCTCCCAAGCCCATCCCTCATGACGCCTATCAACGCAACAGAGAA TATGATGACCTCGAAGATAACCTAGATAGGCTATCATTAAAAGAAAACAG AACACACCAAACTTCACTTATGATCGTTGTTGAAGACTATTATCCTTGTT CTGCTCTAGAACTTCCCGTACGTAAAGGCGAAATCGTACAATATATACAA AGTGAAGGCGTGTGGACGTACGTGCGTGCACGGAACGGAGCAGACGGTTA CATCCCACGCCGTCATTGTTGTTTAGTGGATCCTGCAGAACTTTCAGATG TTGGTTATTTTTCGGATCACCAAAATTGGGAGAGAGTTTCTCCACCGTCA ACGGGTAATAGTCGCACGTCATCTTTCCAACGAGATTCGCCCCGTAGCGT ACGTTTCGTAGGGGCAAATATTAACCGTGATGGAAGCTTTAGCTTTAGTT CCACGACAAGTAGTCTATCAAGTTCATCACCAAAAAGCTTAGTAGTAGAG CCTCTTAAACGAAGAAGCGGACTTTATACTGATGGCCCACATGTTGATAA TAATAGACTGTTCGATCGAACACCAAAACAACTACGTAAAAACACTGCCC TGATGAATGAAGATATGCGACCAGTTTGTGGCCGTAAATGCGGTGAGAAT TGCGAGCATAAAAATGCACTTAAGAAAGATAGAACTTTCTCACAAACATC TCAGATTAGTGGGCAATCGAGTAAAAGTCGAGCTGATTCTGACACCAGAC CGCGTTCTACATCTTCAAaccaaaaattaaagaaatcctCGGTTATAAGC GTTTCAactaaaaacataaacaaaagtgTCTCATTCAATGAGATTAAAAC AAAGAGCTCACAACTCAAAGAGATTAAAACACAGAGCTCACAACTCATCT TTGACGATGTAGACGGTAGACCGAAAACACCAAcagaaaaatcatatttt gagCTGCCACATACAAAATGTGGTCATCCTGAACTGATTATTATTCAAAA ACATAATAAGAAAAGTGAAACGGATATTTCAGTGGATAGAGGAGATTATG CCGCCATTATTAATGATACGAAATATGACGATTGGATGTATATAGTCAAT GAAGCTGGCGAGAGAGGCTTTATACCTAAAAATTGCGCCATCAAACACGA ATGCCACGGTAAGGTTTTGTCTCATCCATTCCGACTTTTAAactaaaaca cccctgtgtcacaaacccgctgggacccgagccccactggaaaatttcgc aaaaattttgtccccgttgggaaaataccctaaaaCTTCAGCCCcattgg gaaattgactttaatttcatccccattcgaaattcaatgtttaagaattg cactccaaacccatcgccactggattttttaaccttggaacaatagaatt tctatccctattgggatttcaataggagtttttatccctactgataggaa aaaagttccaccggggctgtgagacaggggtgtactaaAGGACTAATAGA GGCTGCTGGCATCAACTAATGGATTTGTTCACCTAAACTCTTTATATACA ACCTGGAGTTTTGTAGAGGTTTACAATTCAGATCAAAggaccaaaaattt tctttaattgaGGAGTTTGAATTATAAAGTCTTTTGTTGATAAAAATGAT TGCTATACAGTTAAGTTATTTAACAATACTTGAAACCAACCATGTTCGAG TTTAAAAGAGCCTTAAATGCATTGTATTTACGCACTATTAGCTTCAAACA TTTCACGTGGGACCCACGCCCCACAAGCAAATTACGTTAAAATTTCTTCC CCATTAGGAGAATGAATAACCTACAATTGCAGCCTCACTGGAAAGTTAAC TTTGCTTTCATCCCCCATTTGAATTCATTGGAGATAAATTGCATTTCAAA ACCATCTCTACTGGATTTTTTTCGATCTACCTTCGATCTCCTTATGGTGG GCTATGGTGTTAGGGTCAGTGAGGTTAGTGTGTTCCAATACTACACCTGA TGATGCATTTTGTAGTAAAGGATTCAGATTAGTATAGTAGGTgcttttgg caaatttctacCAGATCCTCTTATATTTTGTAGATTGTCAAGAAAACGCG ACAACTCCTGTCAACGAAAACCCCAACAAACCATTTGGAAGCGAAACACT TCCATCACCAAGATCACCTACAGATGATAAACCGGTATACACAACAGAAG ATTTCAAAACAATGAGACAGTTAGTGATCACGAAAGATTATTCTGGTCAC AGTCTTGATGATTTGTATGTTTGTATTGGTGATATTGTTTACATGAGTCC TGATGAGCAGTCTGGTGACGAGTGGTTGTGGGTTCACTCACTGAAATTGA ATTCGTCAGGTTATATTCCGATTTGTGTTAGCAAGGATATGATGTTGATC CAAAAAGCATCTGTATAATTGTTTCATTATTCATGAGAAATTTCATACTT GGCTTGAGTAGACTCGGGAGAAGAACTAATGTCGCCAGGCGTTTTTTTCC CTTCACGACCTTGTTTAAAACTTCAACTTGTGAAAGTCTTGAACTTCATT CCTACTTCTCACAGAAATAACGAATCAAAACTCGAAGGGGATTGACATTC CCATTTTTTATGGctagggatttgaattccattgttttcaagtcagaaaa ctATTCTTTCAGCGGGGAAAAGATAGGAGAATAATTTTCAACTGGGGCGA TATTTGGCCGATTTAGATCCCAC

Coding sequence (CDS) from alignment at scaffold_331:117739..121511+

>TCONS_00059780 ID=TCONS_00059780|Name=TCONS_00059780|organism=Clytia hemisphaerica|type=CDS|length=4599bp|location=Sequence derived from alignment at scaffold_331:117739..121511+ (Clytia hemisphaerica)
atggcatttttttgtccgtatGGTTCAAAGGGTAACAAAGAAGCAGCTCC
CAAGCCCATCCCTCATGACGCCTATCAACGCAACAGAGAATATGATGACC
TCGAAGATAACCTAGATAGGCTATCATTAAAAGAAAACAGAACACACCAA
ACTTCACTTATGATCGTTGTTGAAGACTATTATCCTTGTTCTGCTCTAGA
ACTTCCCGTACGTAAAGGCGAAATCGTACAATATATACAAAGTGAAGGCG
TGTGGACGTACGTGCGTGCACGGAACGGAGCAGACGGTTACATCCCACGC
CGTCATTGTTGTTTAGTGGATCCTGCAGAACTTTCAGATGTTGGTTATTT
TTCGGATCACCAAAATTGGGAGAGAGTTTCTCCACCGTCAACGGGTAATA
GTCGCACGTCATCTTTCCAACGAGATTCGCCCCGTAGCGTACGTTTCGTA
GGGGCAAATATTAACCGTGATGGAAGCTTTAGCTTTAGTTCCACGACAAG
TAGTCTATCAAGTTCATCACCAAAAAGCTTAGTAGTAGAGCCTCTTAAAC
GAAGAAGCGGACTTTATACTGATGGCCCACATGTTGATAATAATAGACTG
TTCGATCGAACACCAAAACAACTACGTAAAAACACTGCCCTGATGAATGA
AGATATGCGACCAGTTTGTGGCCGTAAATGCGGTGAGAATTGCGAGCATA
AAAATGCACTTAAGAAAGATAGAACTTTCTCACAAACATCTCAGATTAGT
GGGCAATCGAGTAAAAGTCGAGCTGATTCTGACACCAGACCGCGTTCTAC
ATCTTCAAaccaaaaattaaagaaatcctCGGTTATAAGCGTTTCAacta
aaaacataaacaaaagtgTCTCATTCAATGAGATTAAAACAAAGAGCTCA
CAACTCAAAGAGATTAAAACACAGAGCTCACAACTCATCTTTGACGATGT
AGACGGTAGACCGAAAACACCAAcagaaaaatcatattttgagCTGCCAC
ATACAAAATGTGGTCATCCTGAACTGATTATTATTCAAAAACATAATAAG
AAAAGTGAAACGGATATTTCAGTGGATAGAGGAGATTATGCCGCCATTAT
TAATGATACGAAATATGACGATTGGATGTATATAGTCAATGAAGCTGGCG
AGAGAGGCTTTATACCTAAAAATTGCGCCATCAAACACGAATGCCACGAT
TGTCAAGAAAACGCGACAACTCCTGTCAACGAAAACCCCAACAAACCATT
TGGAAGCGAAACACTTCCATCACCAAGATCACCTACAGATGATAAACCGG
TATACACAACAGAAGATTTCAAAACAATGAGACAGTTAGTGATCACGAAA
GATTATTCTGGTCACAGTCTTGATGATTTGTATGTTTGTATTGGTGATAT
TGTTTACATGAGTCCTGATGAGCAGTCTGGTGACGAGTGGTTGTGGGTTC
ACTCACTGAAATTGAATTCGTCAGGTTATATTCCGATTTGTGTTAGCAAG
GATATGATGTTGATCCAAAAAGCATCTGTATAAatggcatttttttgtcc
gtatGGTTCAAAGGGTAACAAAGAAGCAGCTCCCAAGCCCATCCCTCATG
ACGCCTATCAACGCAACAGAGAATATGATGACCTCGAAGATAACCTAGAT
AGGCTATCATTAAAAGAAAACAGAACACACCAAACTTCACTTATGATCGT
TGTTGAAGACTATTATCCTTGTTCTGCTCTAGAACTTCCCGTACGTAAAG
GCGAAATCGTACAATATATACAAAGTGAAGGCGTGTGGACGTACGTGCGT
GCACGGAACGGAGCAGACGGTTACATCCCACGCCGTCATTGTTGTTTAGT
GGATCCTGCAGAACTTTCAGATGTTGGTTATTTTTCGGATCACCAAAATT
GGGAGAGAGTTTCTCCACCGTCAACGGGTAATAGTCGCACGTCATCTTTC
CAACGAGATTCGCCCCGTAGCGTACGTTTCGTAGGGGCAAATATTAACCG
TGATGGAAGCTTTAGCTTTAGTTCCACGACAAGTAGTCTATCAAGTTCAT
CACCAAAAAGCTTAGTAGTAGAGCCTCTTAAACGAAGAAGCGGACTTTAT
ACTGATGGCCCACATGTTGATAATAATAGACTGTTCGATCGAACACCAAA
ACAACTACGTAAAAACACTGCCCTGATGAATGAAGATATGCGACCAGTTT
GTGGCCGTAAATGCGGTGAGAATTGCGAGCATAAAAATGCACTTAAGAAA
GATAGAACTTTCTCACAAACATCTCAGATTAGTGGGCAATCGAGTAAAAG
TCGAGCTGATTCTGACACCAGACCGCGTTCTACATCTTCAAaccaaaaat
taaagaaatcctCGGTTATAAGCGTTTCAactaaaaacataaacaaaagt
gTCTCATTCAATGAGATTAAAACAAAGAGCTCACAACTCAAAGAGATTAA
AACACAGAGCTCACAACTCATCTTTGACGATGTAGACGGTAGACCGAAAA
CACCAAcagaaaaatcatattttgagCTGCCACATACAAAATGTGGTCAT
CCTGAACTGATTATTATTCAAAAACATAATAAGAAAAGTGAAACGGATAT
TTCAGTGGATAGAGGAGATTATGCCGCCATTATTAATGATACGAAATATG
ACGATTGGATGTATATAGTCAATGAAGCTGGCGAGAGAGGCTTTATACCT
AAAAATTGCGCCATCAAACACGAATGCCACGATTGTCAAGAAAACGCGAC
AACTCCTGTCAACGAAAACCCCAACAAACCATTTGGAAGCGAAACACTTC
CATCACCAAGATCACCTACAGATGATAAACCGGTATACACAACAGAAGAT
TTCAAAACAATGAGACAGTTAGTGATCACGAAAGATTATTCTGGTCACAG
TCTTGATGATTTGTATGTTTGTATTGGTGATATTGTTTACATGAGTCCTG
ATGAGCAGTCTGGTGACGAGTGGTTGTGGGTTCACTCACTGAAATTGAAT
TCGTCAGGTTATATTCCGATTTGTGTTAGCAAGGATATGATGTTGATCCA
AAAAGCATCTGTATAAatggcatttttttgtccgtatGGTTCAAAGGGTA
ACAAAGAAGCAGCTCCCAAGCCCATCCCTCATGACGCCTATCAACGCAAC
AGAGAATATGATGACCTCGAAGATAACCTAGATAGGCTATCATTAAAAGA
AAACAGAACACACCAAACTTCACTTATGATCGTTGTTGAAGACTATTATC
CTTGTTCTGCTCTAGAACTTCCCGTACGTAAAGGCGAAATCGTACAATAT
ATACAAAGTGAAGGCGTGTGGACGTACGTGCGTGCACGGAACGGAGCAGA
CGGTTACATCCCACGCCGTCATTGTTGTTTAGTGGATCCTGCAGAACTTT
CAGATGTTGGTTATTTTTCGGATCACCAAAATTGGGAGAGAGTTTCTCCA
CCGTCAACGGGTAATAGTCGCACGTCATCTTTCCAACGAGATTCGCCCCG
TAGCGTACGTTTCGTAGGGGCAAATATTAACCGTGATGGAAGCTTTAGCT
TTAGTTCCACGACAAGTAGTCTATCAAGTTCATCACCAAAAAGCTTAGTA
GTAGAGCCTCTTAAACGAAGAAGCGGACTTTATACTGATGGCCCACATGT
TGATAATAATAGACTGTTCGATCGAACACCAAAACAACTACGTAAAAACA
CTGCCCTGATGAATGAAGATATGCGACCAGTTTGTGGCCGTAAATGCGGT
GAGAATTGCGAGCATAAAAATGCACTTAAGAAAGATAGAACTTTCTCACA
AACATCTCAGATTAGTGGGCAATCGAGTAAAAGTCGAGCTGATTCTGACA
CCAGACCGCGTTCTACATCTTCAAaccaaaaattaaagaaatcctCGGTT
ATAAGCGTTTCAactaaaaacataaacaaaagtgTCTCATTCAATGAGAT
TAAAACAAAGAGCTCACAACTCAAAGAGATTAAAACACAGAGCTCACAAC
TCATCTTTGACGATGTAGACGGTAGACCGAAAACACCAAcagaaaaatca
tattttgagCTGCCACATACAAAATGTGGTCATCCTGAACTGATTATTAT
TCAAAAACATAATAAGAAAAGTGAAACGGATATTTCAGTGGATAGAGGAG
ATTATGCCGCCATTATTAATGATACGAAATATGACGATTGGATGTATATA
GTCAATGAAGCTGGCGAGAGAGGCTTTATACCTAAAAATTGCGCCATCAA
ACACGAATGCCACGATTGTCAAGAAAACGCGACAACTCCTGTCAACGAAA
ACCCCAACAAACCATTTGGAAGCGAAACACTTCCATCACCAAGATCACCT
ACAGATGATAAACCGGTATACACAACAGAAGATTTCAAAACAATGAGACA
GTTAGTGATCACGAAAGATTATTCTGGTCACAGTCTTGATGATTTGTATG
TTTGTATTGGTGATATTGTTTACATGAGTCCTGATGAGCAGTCTGGTGAC
GAGTGGTTGTGGGTTCACTCACTGAAATTGAATTCGTCAGGTTATATTCC
GATTTGTGTTAGCAAGGATATGATGTTGATCCAAAAAGCATCTGTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037609XLOC_037609Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059780-proteinTCONS_00059780-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059780-exon-scaffold_331-1491911889:117739..118035TCONS_00059780-exon-scaffold_331-1491911889:117739..118035Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1510915933:117739..118035TCONS_00059780-exon-scaffold_331-1510915933:117739..118035Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1575043694:117739..118035TCONS_00059780-exon-scaffold_331-1575043694:117739..118035Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1491911889:118789..119946TCONS_00059780-exon-scaffold_331-1491911889:118789..119946Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1510915933:118789..119946TCONS_00059780-exon-scaffold_331-1510915933:118789..119946Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1575043694:118789..119946TCONS_00059780-exon-scaffold_331-1575043694:118789..119946Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1491911889:120872..121511TCONS_00059780-exon-scaffold_331-1491911889:120872..121511Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1510915933:120872..121511TCONS_00059780-exon-scaffold_331-1510915933:120872..121511Clytia hemisphaericaexon
TCONS_00059780-exon-scaffold_331-1575043694:120872..121511TCONS_00059780-exon-scaffold_331-1575043694:120872..121511Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:117739..121511 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0.172122 0 0.190221 0 0 0 0.420695 0 0.152041 0.163158 0.50251 0.515056 3.55789 2.38277 0.517744 0.378791 0.307004 0.418667 0 0.25655 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059780 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top