TCONS_00059860 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059860
Unique NameTCONS_00059860
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2985

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059860 ID=TCONS_00059860|Name=TCONS_00059860|organism=Clytia hemisphaerica|type=transcript|length=2985bp
AATACCCAGAAGTAGGAAAGACATTGTGACGGATAGAATTATGTTGCTtg
aaatgttcattcttttatttttagggATCGCTCTGGCAACTGACTTTTTA
GCCTCAAAGGTATTTGAGAGTAACCGAAGACGGCTGTGGGCTAGATAAGC
CTTTGAAACACTATGGATTCATTAGAAGAGGCTAGAGATGATaaatacaa
tgaaaaacatATTCAAGATCGAAAGACTTGGTTTATATCAGAGTGCTGGC
AAGTCAAAGGCAAGTGTGGAAGAGTTCGTTTCCAATTCAACCCATTGTCA
ACTTTTCTTGGTGCTTTCGTCTTGTGGGCCATCCTTATATGGGCCATTAC
TGATGAGGAGACCAGCATTGAAAAGATCAATGTTGCGCGACGGTGGATCA
CTGATAAATGCACGTGGTTTTACATTGGCAGTCAATTTATTTGGGTTATC
TTGATCgtttatatttatttcaaatatgGACATATCAAACTTGGATTATC
AACAGATCAGGTAGAATACGGAGATTTCGATTATTTTGCCATGATCTTTA
CAACCGGTATATGCAATGGATTGTTTTACGATGGTGCAAGCGCTCCCATC
GCTGGATATAATGATTCCACCGATAATTTACTCATCTACAAGGGAAAGAG
TAATCATATTACGCAAGCGCAGAACTCGTTGAACGTTGTGATGTTTCATT
GGGGTTTCCATGGTTTCAGTGTGTACGTTTTACCTTGTCTCCTCTTATCT
GTTCTTTGCTATCGTAAAGGTTTACCTCTGACAATGCGTTCCTGCTTGTA
CCCTGTGTTCGGTAAGAAGATCTTGGGACGATTAGGTGACGTCATCGACA
GTATCTCCATTATTTGTATGGGGTTCGGAGTAGCTACCTCCTTCCTATTA
GGTGCCATCATGGTGGTAGTAGGGTTACAACCTATCTTTCCTGAACTAGC
TGACAACCAGACTACAAGATTGATTGCGTTATGGGCTATCTCTATAATGT
CAATGTTTTCGGCAATGAGTGGTATCAAGCTTGGTATCAGGAGGATGTCG
CAACTATGTTTCTTAACAGGAGCTTTATTCACATTAATCGTTGCGTTCAG
TGACAACCTGTGGTATTTACTCAATCTGGCTGTTCAATCGATTGGTTACT
ATTTCCAATACCTCATATCGACATCAACATTCACTAGTGCTTTCGTTCAA
CAAAGAAATTATCCTAATGGCAAACAACAGGAATTTGATTGGATGCATAA
AAATACCATCTTCTATTGGGGCTGGTGGTTAGGTTGGGCACCTTTGGTTT
CAATATTTGCTACACGGATCAGTAAAGGTCGAACAATCAAAAGTGTGATC
GAAATTGCTTTCATAATCCCAAGCTTTGTCAATTTCATTTGGTTTGTCGT
TGTAGGAGGTGTGTCCATTGATATGGAAAATCAAGCCATTTCAATGAGAC
TCCATTGCGGCATGAACAAAACAACACGTGATGCTTTAGGAGCTCCTGAT
TGGCTACACAGTCTCGGTTGCATTGATGAAGACAAAAGATTCTTCATGGT
GATCGAAAAATATGAAGATATCAAGATTATTCTTCAGATTATCGCTTTGA
TGATTACATTACTGTATTTTATCACGAGTTTCGATTCAGCTGCACTCGTC
ATGGGCACCATCTCGAGTAACGGTCTAGAGGAGCCACCATTGATTCAACG
TATTTTCTGGTGCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTT
ATACTGAATTCACTGATCGTGCTGATGTCAATGCTTTTGCTATTCTGGCT
GGCCTTCCGTTCGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCG
ATTATTGAAAATGGAACCATATTGGTTTTACAATGAAGTCGCTCACTGGG
AAATGATTTATGGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTG
TTAGCAATTGTTGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAAT
TAGCCTAAATCACCATGGCGACAAGAATGGTAATCATGTAGGTGAAGGAC
ATCCGCCCGTGTCCGCCCAAACTGCAGGAAGTCCACCCTTATCCAACCAA
AAACGATTTTTCGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGAT
TGTTTTACTTCTTTTACAAATTCGATACCAAAAAATAAATAGTGTTGGCT
GGGCTGTTTTTGTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTAGAGCT
CTTCGTCGCCAGTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGAT
CATGGCGATTTTCCCGTTTACCGTGGTCCAGATGTATCGACAGGTCACTT
TCGGTGAAAGATCAATCGAAACTGGTGGACGAGCATCCAGGCTAAACAGT
GATACCACAGAAATGAAGAACAACCCATCCACCAAAAGTAACAGAGGACA
ACGCAATTTAGCCTACATACAGGATGAATCATTTTCGCCTGAATCTCCGC
CCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAACGTGTATTGCTC
TGCAGTTGGTActcaacgttgttttaacattcACACAACATTATAAATTT
GGATGTTAAAAGGATGTGATTTAAACTTTCGTTAATCTTTAGATGGATCA
ATGCAGTTCATTCAAACAACTTTAAAACGATATTCCATagtttaaaagaa
gtttttataTGGAAAAATGATACTCATCATCCCAAATTTAAACATAGATT
TCGGGTATCTTGTCGGGTATAATCTAAAAACTTGGTTTAGATTCTTTATA
ATAATAATTGATCTCGTGTCTCGATTTCCAATCAATTCTGTTACGTTTTT
TTCTCGGACACGCTAGACTAGAGTGTACTTCTGGCAAAAGTTTGCTTTTT
AATGATACCTTTTGATGACGCTAAGCCCGCGAGCTACTTGACAAGGATgc
aatttttgcgaaaaaaaaactttccgaATAACaag
Run BLAST on NCBI

transcript from alignment at scaffold_331:1221263..1239571+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059860 ID=TCONS_00059860|Name=TCONS_00059860|organism=Clytia hemisphaerica|type=transcript|length=18309bp|location=Sequence derived from alignment at scaffold_331:1221263..1239571+ (Clytia hemisphaerica)
AATACCCAGAAGTAGGAAAGACATTGTGACGGATAGAATTATGTTGCTtg
aaatgttcattcttttatttttagggATCGCTCTGGCAACTGACTTTTTA
GCCTCAAAGGTATTTGAGAGTAACCGAAGACGGCTGTGGGCTAGATAAGC
CTTTGAAACACTATGGATTCATTAGAAGAGGCTAGAGATGATaaatacaa
tgaaaaacatATTCAAGATCGAAAGACTTGGTTTATATCAGAGTAGGTTT
ATTATCATACAATTCGAAATAAAATGCATGGTAGCTATCACGTCTTAAAC
ACACACCTCTCTCTCACAGCCTCGTGAAACTCTTCcccacagcggggata
aaaatttctattgaaatctcaattctattgttccaagattgaaaaattca
gtggggatggttttggagtgcaattattAAATGCAATTAAAGATTgcatt
tcgaatggggatgaaatcaaagtcaatttcccagtggggcaaaaattcta
gggtatttttcccactggggacgaaatttttgccgaATTTTCCAGTGTGG
CTGGGGTTCCAGCGgggctgtgacacaggggtgttcttAAATTGAGTAAC
GAAGCGATTCTCAGGAATGTAAACAACCCATATAAGATATTAaggaatta
tttttacatgcATGGCAAAATGGTCATTTCTAATGTTTGAGATTTAGATA
TCCACGTGGAGCTTTCTTTCTTCATAAAATGTGCCTTTTCGGTTTATTAT
ATTTGTGACAACACGTATATCTGAGTAACTCAGTATTACCAAGGAATTTG
GATTATGTTTTATTAAAGTTCCTTGGTATTACAACTACTTAACTGAGGAC
TGCAAAGTGAGATTCGAACTCACGACTTTCGCATTACTAGTACAACTAAG
GTCAATGCGCAGATATACTTGTTTCACAATACGGTAAGCCCTTCATataa
gcgagtttatgtatttgcacttatgaggacggtaaagtgactgaagcgat
ttggaataacccacaGTTCTGACCCGAGAAATCGAGgatggtaaaagtgc
tgattttccgtcgtcctcagttgattAGGATGTTGACAAATTAGAGCCTt
gccgtctccgtcgcagaaaaacacacatacataaactcagtAATAAGGGC
ATATTAGTCCCATTCAGGTTCATCGAAACGCTGATTTATTTCAACATaac
tgtgtcacagacccgctgggaccccagccccactagaaaatttagcaaaa
atttcgtccccggtggaaaaataccctgaaatttcagccccactgggaaa
ttgactttgatttcatccccattcgaaattcaatgtttaataattgcact
ccaaacccatccccactggatttttaaccttggaacaatagaatttctat
ctatCCCATTGCGATTTCGATAGGAGTTTTTATttccactgaggaaaaaa
gttccaccggggctctGAGACAGAGGTGTATTTCAATTACAGGTGCTGGC
AAGTCAAAGGCAAGTGTGGAAGAGTTCGTTTCCAATTCAACCCATTGTCA
ACTTTTCTTGGTGCTTTCGTCTTGTGGGCCATCCTTATATGGGCCATTAC
TGATGAGGAGACCAGCATTGAAAAGATCAATGTTGCGCGACGGTGGATCA
CTGATAAATGCACGTGgttagtttaatattttttctgtATGTTAATAGGG
TTGTTAAAGAGAATGTTCATGTCTGTAAaactatttaagcaattttccTT
CGGATATGTATGTAGGAAATCTCAGCTGTAATATGAAACTTTGAAGTTCG
AaagtttttaaactttatttcTCGTTTCAGGTTTTACATTGGCAGTCAAT
TTATTTGGGTTATCTTGATCgtttatatttatttcaaatatgGACATATC
AAACTTGGTAAGTATGGACATAAAGTTTCAGTATTTTTTTTGTTGTGTGC
AGCTGAATTCTGTTGCAGTTTCAGCTGACAAAAACGTCGAATCAGGGGAA
ATGAGAGACTTTATGTTGGCATAGGGAGATTTCAAAATTCACGAAACGGC
CGTCATTTTGATTTTGCTCGGGTACCAGAAATCAGATGTCATTAAAATAC
ACggacaatagaaaaaacaaaagaaatcggaactttaatttttttttgta
agtcACCCTTCTCTCACACCCCTGGTCGAATCGACATCTAATTAAAGTCG
ATTGCAAAATATTACTTAtgtcactttttgaaaaaaaaagccGTTAATAC
AGTTATTAAGAACGCTTTGGTTCCATTCTCTTTTTCACAGGATTATCAAC
AGATCAGGTAGAATACGGAGATTTCGATTATTTTGCCATGATCTTTACAA
CCGGTATATGCAATGGATTGTTTTACGATGGTGCAAGCGCTCCCATCGCT
GGATATAATGATTCCACCGATAATTTACTCATCTACAAGGGAAAGTACGT
TGAAAAGTATTGGGCTGcgttatttaaaggttttatttttacatgagtgt
tcccgttttatatcagacacatttcatatcaggacagtgtctacctacaa
tcaaggtcataatatatgagaaaaaagggaaattccccaggaagttctga
aaccacaatcgatttgtaagtgctctaaagtaggttcaaaGGGCAGAGTT
TTAActttgagttttaacgctagacttaagaccttaggatctaaggacct
taggatctgaggatccaaaagttcaaaaatagtccaataaggctcagaat
atagcctggaagtctgccaacccctcccaagttaagatattcgattaaat
taaagagatagcccaaaatcgactttctcgccgaaactttaaatcttgaa
aaacgttaaaacatcgatggttaaaataaccggaattttcaatatatttc
aaccatgctTATAATTGTCATATTGTGTTGAATGTTTTTCTTggcctctt
tctgaccaatcttgctccacatccgtgtcaatccaatgtgaaaaagctta
taaatcaaaattgatgagtaagcaaacgatatcattatATATACATTATA
TATCGATATCatatcttatttaaaaacaaaacctttgatATTGATCCACA
TATGGAGGCGGAAGgaaaaataagtttaaaaaacTTATAATTGTGTGGAT
ATTTCCTGGAAGGAtggcaaaatttacaaaaaaacccTGGAAAAGGATTC
TATTCCCCTTATGGAAAAATTTGCCTCTATGCggtaaagtgagggtggac
gaacaaaACTTCATCTTTTATCCCCTTTAAAGTTCAGAATAACTTTCGCC
TCGAAATTTCGGAAACTTTCTTCGAACCTAGAAATTAGCATGTTGTTTCA
TCCGTGGAAAAAGGAAAATAGACAGCCAATGCTTTCTCATCCAACAACAA
GCAAAACTTAAACTCCCTATAATCTCCCCTACACCACTTGGAATTTCTTA
TTTGGGGACACCTCAAAAATGTTCGTCAACCGTCAACCCATTGTGTGGGC
ATGAAATGGAAATGGTCgatttattaaaaaattctaGATTTATGATTTTC
TTGACGTATATTTACATACGGGAAAAAACAGGAGTAGTTCTTTTTTTTAA
CCAATATTGAGCCCCTATTGAATTTTACGTAATAAAATTATGacaatttt
aagtatttttctgtGTGGAAAATCATGAGTGATACATTAGCTAAATAATC
CAATGAAAACGCAGGGCAAGTTCACAAGTAGTTTTTGATTTATCAACACC
CTGAGTGACTTAAACTTTGGTAATCTTTTCTTTGccatttgttttcaatt
tttcggaGCTTCTAAACGCATAAATTTCCAGGAACAGTACAGCAGCTAGA
CAGAAGAACTTTCTTGTTCTGGTCAAAATTGATTGATTCATTGTTGGATT
AAGATTCTAAGAAAATGCTTACCAATTTTCTTGTCTAGGAGTAATCATAT
TACGCAAGCGCAGAACTCGTTGAACGTTGTGATGTTTCATTGGGGTTTCC
ATGGTTTCAGTGTGTACGTTTTACCTTGTCTCCTCTTATCTGTTCTTTGC
TATCGTAAAGGTAGGTAAATTCgaactttattttataagaactactATAT
CTTGCTTAGCCTTCACTgcttttacaagcttttttataagaaccagtaaa
ttttggttgGTGGTCGTGATTTTTAGGCCTAGATGATTTGTGATGTTTAT
CTTATTCACTTTTTAGCTAAAAAGATGTTTTAAATCCAGTAACTTCTGAA
ACCTTAAGCCTAAGCTTGTTCTTAATTGAGCCTcatgttctaataaaaat
gttttcataaAGTGAAGTTTTTAGGGCTCAAACCAGTCTTCAATCATAAA
TCTTCTTACATATGAGACTCTTGTTCTTGTTctttggttcttataaaatt
attattatataaaaccCCAACcattgttttattgaaaatcactATCTGCA
GGTTTACCTCTGACAATGCGTTCCTGCTTGTACCCTGTGTTCGGTAAGAA
GATCTTGGGACGATTAGGTGACGTCATCGACAGTATCTCCATTATTTGTA
TGGGGTTCGGAGTAGCTACCTCCTTCCTATTAGGTGCCATCATGGTGGTA
GTAGGGTTACAACCTATCTTTCCTGAACTAGCTGACAACCAGACTACAAG
ATTGATTGCGTTATGGGCTATCTCTATAATGTCAATGTTTTCGGCAATGA
GTGGTATCAAGCTTGGTATCAGGAGGATGTCGCAACTATGTTTCTTAACA
GGTACAGTCAActttcgcttattcgaacttctattatttgaatctttctg
taattcgaacttaatCTCAGTTCCCGTAAGGGAGGAACCCTCttaaaata
atttctataattcgaatctctctgttattCCGACAGATAAGATTTCCCGT
TCGAGCTAcagtaccgagtttatgtattcgagataaatcgagggggacgg
tataaagcaaagctgacatAGGACCGAagtcaccgtccactttgctcgac
gacggtaaaaacaccaagataccgtcgtctgtttaggtgagcaaaggcga
tataaagccgtacatcaactatcgactttgttttgtatcgatttcactta
ccgtcgccctcggtatcctccgatacataaactcggtagtgTTACAGAGT
TACAGTGTTCATAGTTTTTTAGTCCCAGTGAAGTATGAAAAGAGGGTTTT
CTGCCTTTctgaatttcagcaaaatttagcaaaatattgaaaacaatCTG
GACTAATTTGTCGTGCTTAGTCCATTTTACTTCTGAGAGGAAAAAATTGA
CCACTGCTTTTAGGATTTAAgtctttattttctattttttgtatTACCAC
TGACACTGTGGATATCGGTAGggatataaaaaaatgttgtcTCAAAGGTT
GAAGTTATTTTTCCCATTATATCTGTTTAAATTCAATTCCTGGAGCTTTG
TTCACATTGATTTTGGCGTTCACGAGTATTTAGTCACTCCACCCTCCTCA
CAAGGGTAGATAAATAAACTCGCTTATTTTCCgtcaaaaattgaagttag
cgaggttaagcacgggttAATTTTGACAGTAAAatgcgataccgtaggcc
tgtacataacttgccaaagcagaccatgcaagtgaaatcttatgtacagg
cctacgatatcgcattggacggtctaaataaacacttgcttaacctcgct
gtTACCTTTCCTATGATACCAGTTTAATTCAATAACAATTCAATTCCAGG
AGCTTTATTCACATTAATCGTTGCGTTCAGTGACAACCTGTGGTATTTAC
TCAATCTGGCTGTTCAATCGATTGGTTACTATTTCCAATACCTCATATCG
ACATCAACATTCACTAGTGCTTTCGTTCAACAAAGAAATTATCCTAATGG
CAAACAACAGGAATTTGATTGGATGCATAAAAATACCATCTTCTATTGTA
AGTTGAATTAGTATAACTACAGTAtggtctctttaactcgaacctttata
actcgaatgAACTCCGACAATTTTGTGTTCCCCGTGAGGGTTCGAGTTGT
GGAAAATCCACTGTAGTATAAAGCGGAACTCTGTGCCTCATTCCTGGTAG
GATGGCCGATAGTGTATCTCCTTTTTGGGGGCTTTCTTGAGGCTGTCGAC
AATGGAATTTGACATTACTTCAAAAGGGTTTTCTTTTCCACCGGCTTTTC
ATTCCCTTTAGCATacaaattttaaattcaagGGTTCtagttttcgcggt
ttttcgaaaaaaagcgACAATTAGTTCCTTCGAAAATTATTTCCCTTGTA
AACTTGACTATATACAGTAGTACTGAAATCATAATATACGAGCCTTAAAT
TGAAGTTGTTCTCACAAACACAGAAAAGAGTGTATCAATTTTTCACTAAG
ACAGAGAATTTAACAAATCGTTTGGGACGTTTCCAATGACGAATTACGTT
ACAAAATTATGACtattatcttctttttttcgaTTCACTCACTTAGAGTT
AATAAAACGCGATATGTAATGAAGGCCATGCAACATCTGCTattatcatt
ttcttttctttttctcgttTTAGGGGGCTGGTGGTTAGGTTGGGCACCTT
TGGTTTCAATATTTGCTACACGGATCAGTAAAGGTCGAACAATCAAAAGT
GTGATCGAAATTGCTTTCATAATCCCAAGCTTTGTCAATTTCATTTGGTT
TGTCGTTGTAGGAGGTGTGTCCATTGATATGGAAAATCAAGCCATTTCAA
TGAGACTCCATTGCGGCATGAACAAGTAGGTGGTCTCACGCACTAAGATA
GCTcggtttttgaaaagttttagcTACGTGGGacttattttacaaaataa
GTTGGGACTGAACCTCGAaagtttctcaaaattttctgatttttctaatT
TCGCATAAAATTGCACTCTTGGACTGAACtgactttttgtatttttgttt
tgacgGCCCTACCTAGAACTGTTACATGTTTACTTTGGCGGTAAACATTG
CTATAAATCCAGCGTtcgtgtgaaaaccacgcgggtcaTGCAACTTACAT
AAAAAAGGAGTTCAAAAATACAGCAAGATTTCATCGAAATACTATCTATC
TTATTTTTACTAGAACAACACGTGATGCTTTAGGAGCTCCTGATTGGCTA
CACAGTCTCGGTTGTATTGATGAAGACAAACGATTCTATATGGTAATCGA
AAAATATGAAGATATCAAGATTATTCTTCAGATTATCGCTTTGATGCTTA
CCTTACTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGC
ACCATCTCCAGTAACGGTTagtcctttgttttttttctcatttttgtgaC
TATTCCTTGTTCTTTAATTAAACTACAACTTTGTATCAAAACCGCGACTG
AAAcctgtccattttcctaatgaTAAAACGGTTCATAACAGCGAATGAGG
GCGGCATGGCCGAAACGAAAGATTTTCTGGGAAATAGAATCCTATACAAA
GCGATGGTATTTTGTACAATCTAcccttttcgaaattttattcTTATTCT
TACAGGTCTAGAGGAGCCACCATTGATTCAACGTATTTTCTGGTGCATCA
CCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTCACTGAT
CGTGCTGATGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTTCGCAGT
TTTGATGTGTTTCTGTGCTATTTCACTGTGGCGGTGAGTTAATTATCATT
AATCGGGAACTCTAGATAAGTCCCCCACCCTCCCGAACAGTTAGCTAAAA
CATTTTCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CAGTGACAACCTGTGGTATTTACTCAATCTGGCTGTTCAATCGATTGGTT
ACTATTTCCAATACCTCATATCGACATCAACATTCACAAGTGCTTTCGTT
CAACAAAGAAATTATCCTAATGGCAAACAACAGGAATTTGATTGGATGCA
TAAAAATACCATCTTCTATTGTAAGTTGAATTAGTATAACTACAGTAtgg
tctctttaactcgaacctttataactcgaatgAACTCCGACAATTTTGTG
TTCCCCGTGAGGGTTCGAGTTGTGGAAAATCCACTGTAGTATAAAGCGGA
ACTCTGTGCCTCATTCCTGGTAGGATGGCCGATAGTGTATCTCCTTTTTG
GGGGCTTTCTTGAGGCTGTCGACAATGGAATTTGACATTACTTCAAAAGG
GTTTTCTTTTCCACCGGCTTTTCATTCCCTTTAGCATacaaattttaaat
tcaagGGTTCtagttttcgcggtttttcgaaaaaaagcgACAATTAGTTC
CTTCGAAAATTATTTCCCTTGTAAACTTGACTATATACAGTAGTACTGAA
ATCATAATATATGAGCCTTAAATTGAAGTTGTTCTCACAAACACAGAAAA
GAGTGTATCAATTTTTCACTAAGACAGAGAATTTAACAAATCGTTTGGGA
CGTTTCCAATGACGAATTACGTTACAAAATTATGACtattatcttctttt
tttcgaTTCACTCACTTAGAGTTAATAAAACGCGATATGTAATGAAGGCC
ATGCAACATCTGCTattatcattttcttttctttttctcgttTTAGGGGG
CTGGTGGTTAGGTTGGGCACCTTTGGTTTCAATATTTGCTACACGGATCA
GTAAAGGTCGAACAATCAAAAGTGTGATCGAAATTGCTTTCTTAATCCCA
AGCTTTGtcaattttatttggtttgtcGTTGTAGGAGGTGTGTCCATTGA
TATGGAAAATCAAGCCATTTCCATGAGACTTCATTGCGGCATGAACAAGT
AGGTGGTCTCACACACTAACATGAAGTTcaatttttgcgaagcgaatata
catgagcgaagcagttttgctatagtgtgcatgtacctttaaaaTCTATA
TACCCAGGGGAGTGCAAGACGAAAACGAAAATTTAGCTCCTATCTGTTAA
ATGTGGGTTAAGTATTCAGATCCCGGTTGTTTTCGTCCAGGTAAGAGGCG
TTACAATATCGGACTGGTAGATTGTATTTAGGATGGCTTCGTCGAGAAAA
AGAACCACTCTACGGCTCCGAAAATCTCCGAGTCAGGGCAACTTCCATAA
AAAATATTCCGTCGTTCCCGTATATTATTAACTTCTTTACTCCCGCTCCA
TATCAGAAAGCTGATTGGTTCGGAAAACCAGAGCGCGGTCGAAGCGTTCA
AATATCAGAAAGCTGNTGAACTCTGTGCCTCATTCCTGGTAGGATGGCCG
ATAGTGTATCTCCTTTTTGAGGGCTTTCTTGAGGCTGTCGACAATGGAAT
TTGACATTACTTCAAAAGGGTTTTCTTTTCCACCGGCTTTTCATTCCCTT
TAGCATacaaattttaaattcaagGGTTCtagttttcgcggtttttcgaa
aaaaagcgACAATTAGTTCCTTCGAAAATTATTTCCCTTGTAAACTTGAC
TATATACAGTAGTACTGAAATCATAATATACGAGCCTTAAATTGAAGTTG
TTCTCACAAACACAGAAAAGAGTGTATCAATTTTTCACTAAGACAGAGAA
TTTAACAAATCGTTTGGGACGTTTCCAATGACGAATTACGTTACAAAATT
ATGACtattatcttctttttttcgaTTCACTCACTTAGAGTTAATAAAAC
GCGATATGTAATGAAGGCCATGCAACATCTGCTattatcattttcttttc
tttttctcgttTTAGGGGGCTGGTGGTTAGGTTGGGCACCTTTGGTTTCA
ATATTTGCTACACGGATCAGTAAAGGTCGAACAATCAAAAGTGTGATCGA
AATTGCTTTCATAATCCCAAGCTTTGTCAATTTCATTTGGTTTGTCGTTG
TAGGAGGTGTGTCCATTGATATGGAAAATCAAGCCATTTCAATGAGACTC
CATTGCGGCATGAACAAGTAGGTGGTCTCACGCACTAAGATAGCTcggtt
tttgaaaagttttagcTACGTGGGacttattttacaaaataaGTTGGGAC
TGAACCTCGAaagtttctcaaaattttctgatttttctaatTTCGCATAA
AATTGCACTCTTGGACTGAACtgactttttgtatttttgttttgacgGCC
CTACCTAGAACTGTTACATGTTTACTTTGGCGGTAAACATTGCTATAAAT
CCAGCGTtcgtgtgaaaaccacgcgggtcaTGCAACTTACATAAAAAAGG
AGTTCAAAAATACAGCAAGATTTCATCGAAATACTATCTATCTTATTTTT
ACTAGAACAACACGTGATGCTTTAGGAGCTCCTGATTGGCTACACAGTCT
CGGTTGTATTGATGAAGACAAACGATTCTATATGGTAATCGAAAAATATG
AAGATATCAAGATTATTCTTCAGATTATCGCTTTGATGCTTACCTTACTG
TATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGGGCACCATCTC
CAGTAACGGTTagtcctttgttttttttctcatttttgtgaCTATTCCTT
GTTCTTTAATTAAACTACAACTTTGTATCAAAACCGCGACTGAAAcctgt
ccattttcctaatgaTAAAACGGTTCATAACAGCGAATGAGGGCGGCATG
GCCGAAACGAAAGATTTTCTGGGAAATAGAATCCTATACAAAGCGATGGT
ATTTTGTACAATCTAcccttttcgaaattttattcTTATTCTTACAGGTC
TAGAGGAGCCACCATTGATTCAACGTATTTTCTGGTGCATCACCATAGCT
GCTTGTACTTCAGCTCTTATTGTTTATACTGAATTCACTGATCGTGCTGA
TGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTTCGCAGTTTTGATGT
GTTTCTGTGCTATTTCACTGTGGCGGTGAGTTAATTATCATTAATCGGGA
ACTCTAGATAAGTCCCCCACCCTCCCGAACAGTTAGCTAAAACATTTTCG
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCAAGCCAG
AGCTTCCCAAGATTAAAAGGGGGTTTCCCAAATTTTAGATGGAGTTTCTC
AAATACACGGGCTGTAATAGTGTAAAATTATATCTAATCAAGtacaatgc
agtcaaaacacgTGATTActcaaaaaagttcacgtgatctTATTCCCATG
TTAATTaattgctttacaacttacagctgataactttgttagtgtcaata
aattcgaagcaatcagaaataaatgtcatgtaacaagcacataaaaattt
cgagtaaaagcgtgatttttcttcagactttaattttgcaacctgtgtat
tttttagtagaaactaaaaaaaatttgggaGACACCCAGCTTGATTTTGG
GAAACTCCGTTTAAAATTATTGGGAAACTCCGTCTAAAATTTGGGAAGCT
CTGGCTTGGTTTGAGAAACTCCATTTAAAATTTGGGAAACTCCGTCTAAA
ATTTGGGAAGCTCTGGCTTGNTATAAGAGAGTGAGCAAGAACATGAACTT
GGCCTTTTTGCATGCTTTGAGATGGGGACGAACATATTCAAGTTATGGAT
AATCTGGAAGAATTTATCCCTCCTTCAGTGGAAAAGAGAACTGATTGTTT
GTCGTTGTTGTTGAGAAATCTTGACTTGGCTGCTCGAAAATATGTGGGCT
CTGGTTGCTTGCTGTTATAAATATGCATTTGATGGCCAGGATAAAGTAAA
TATTGANTAACTCCATTTAAAATTTGGGAAACTCCGTCTAAAATTTGGGA
AACTCCGGCTTGATTTGGTTGAAAAGAAAAAGCTGAAACTACGATGGccc
tgaaggctcaaaatttctcttgaaaaaacaaccagaGTTTCCCAAAATCA
AGCTGGAGTTTCCCAAATTTTAGACAGAGTTTCCCAAAACCAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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ATGCAAGGGACTCTAAAATAAAGACTAGATTTGATATCAacatttacatg
taaaaatcttcGAAACCATGAATACTATCATCGATTCACCAATCATTTAC
TGAGGAAAGACTGTCTACCCTGGGATTCGGCAATCTCCATTAACccgacc
tcgacctcgaccctgacccttgaaaaaggcctaccctcgacccttggaaa
aaagccgaccctcgaccaaaatacaataaaaagccgaccctgggtaaaaa
aacagtttttctggcagtgttttttttaAGGGTCAAAGTCGAGGTCGAGG
TCGGGTTAATGGAGATTGTCCTGGGATTCTAACATAATAAAAAACTATTA
TGGCAGGGGGGATTcgaatgtttgtttttatttaaacattcgaaattcga
aagaTTAGAAAGTTCGATTTTCGAACACGAGGAATTTAAAACCGGAAGTA
AAATGagtcaaaataaaaaccaaaattgaaaataatttactttCTAGGTC
TAGGTGGAAAAGCTTTCCCGAACAAAAGACgcgattttaatattttcttc
gaACATTTTTTACTTACCTTACATGAGTATTAGGAGACGTGTAATTAAGt
gaattaacacgaattgagaaatttcatgttaatttcaaggccgttaaata
aATTATGAATCATTTTTGTTTGGTGAGACCCCTATAACGTTAGAAAAAAG
AACTTATCGGGCTCATTCAATACTTTCTAtctttttgcttgcaacttgcg
aatttagTGACCTGCctcgatcgcttcgcaacttttatacatatacggct
tgtttATTCAGTCGCGATAAGAAATCATGCACTCTAATTTACAGAAGTGA
AGAAAAGCTTAAAATTCAACTCCACAGTACTACCCTTTGCAGAAATAAGC
GCAGAGAAAGCCTTCTGTAGGAGCACGTGGTACATTACTAAAGCACAAGG
ATATTGAACTTTTATCCCATTGACTTCAAatccccgaaggggctagaccc
gaaactcctggatgagaaatgaagccgcttatttcccatccaaaacgcgt
gaCCTTTCAAGCTGAAAGTAAAGCCTAtagctagattttgaaaaatatgt
tgcgcgaaaagaaaaaaagggcTAGTTTCAATCCGTCATCTTAAGTGCCG
CGCAAATCTtaaagtttcactttttcttgcttgtgaaaggttaaagattc
ctATTTAGTCCCNCGAAAAATATGTCGCGCGAAAACAAAAAAAGGGCTAG
TTTCAATCCGTCATCCTAAGTGCCGCGTAAATCTtaaagtttcacttttt
cttgcttgtgaaaggttaaagattcctATTTAGTCCCTTCTGCGGGGGCT
TCAAACTCGATGTTTTGTCCGTCATTAGCCTCGGCTTAGTTAAGATTATC
ATAAAGGTAGACAAAAGTCCACAACGAGGGGGACACTTtcgattacacgc
ttttttataagaatatactttataagaatattcatgatgaaattgatgAG
ATtaaccaaaaaaattagaaaatgccGAGAATAAACCATCACGAAAGGTG
ACAGCTGAACCTAAGAATGacatttttagagtatttttgactttaaattg
ccaattattcccCTGTAATGCTCaaaacttttacaaaagtgccattttcc
tttttttttactaGANATTATTCCCCTGTAATGctgaaaacttttacaaa
agtgccattttcctttttttttactaGAACAACACGTGATGCTTTAGGAG
CTCCTGATTGGCTACACAGTCTCGGTTGCATTGATGAAGACAAAAGATTC
TTCATGGTGATCGAAAAATATGAAGATATCAAGATTATTCTTCAGATTAT
CGCTTTGATGATTACATTACTGTATTTTATCACGAGTTTCGATTCAGCTG
CACTCGTCATGGGCACCATCTCGAGTAACGGTTAGTCCTTTGTTTNTTCA
GCTGCACTCGTCATGGGCACCATCTCCAGTAACGGTTAgtcctttgtttt
tttctcatttttgtaaCTATTCCTTGTTCTTTAAACTACAACTTTGTATC
AAAACCGCTACTGAAACTTGCCCATATGATAAAACGGATCACAACAGCGA
ATGAGGGCGGCATGGCCGAAACGAAAGATTTTCTGGGAAATATAATCCTA
TACAAAGCGATGGTATTTTGTACAATCTactcttttcgaaattttattcT
TATTCTTACAGGTCTAGAGGAGCCACCATTGATTCAACGTATTTTCTGGT
GCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTC
ACTGATCGTGCTGATGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTT
CGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGGTGAGTTAATT
ATCATTAATCGGGCACCCTCCCGAACAGTTAGCTAAAACATTTTCGCACG
GGAAATTGAATCAATCCAACTAGCTCCTTTTAAAATCAAACCCTTGGCAG
GTACCAAGATGAACGTTCTGTTTGAAAGAATATTCATTAAAGCAAAGGTA
ACATATACCAAACATGTATATTTTCATAGATTATTGAAAATGGAACCATA
TTGGTTTTACAATGAAGTCGCTCACTGGGAAATGATTTATGGTCATATTG
ATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGTTGCTCCCTGG
TACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATCACCATGGCGA
CAAGAATGGTAATCATGTAGGTGAAGGACATCCGCCCGTGTCCGCCCAAA
CTGCAGGAAGTCCACCCTTATCCAACCAAAAACGATTTTTCGCGTACTTC
AAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTCTTTTACAAAT
TCGATACCAAAAAATAAATAGTGTTGGCTGGGCTGTTTTTGTCGGGTTCT
TGGTCCTTTCGAGTCGCATTCGTAGAGCTCTTCGTCGCCAGTATCGAATA
CAAGGAAATGTTTTCGAAGATATTGCGATCATGGCGATTTTCCCGTTTAC
CGTGGTCCAGATGTATCGACAGGTTACTACAAATTATACTTTTAAATCTT
GAATTGACGTTTTTCGTACCCCATCGTATGAGTTTTAGgaaaaaaggatc
aaaatctAAATCAAATATCACTACGGATGTTACTTGCCATtgcgaaaaga
ttttttcaatatgTAGTTAAATTcccttttcatttgaaataagtttttct
tttttcaaaactacggTACTCATCGCCTGACCCATGAAGTTATTGCCTTT
TTCTCGCGTCATTTCAGGTCACTTTCGGTGAAAGATCAATCGAAACTGGT
GGACGAGCATCCAGGCTAAACAGTGATACCACAGAAATGAAGAACAACCC
ATCCACCAAAAGTAACAGAGGACAACGCAATTTAGCCTACATACAGGATG
AATCATTTTCGCCTGAATCTCCGCCCATCTATCAATCTGGTGAAGATTTC
TTAGCTGCTTAACGTGTATTGCTCTGCAGTTGGTActcaacgttgtttta
acattcACACAACATTATAAATTTGGATGTTAAAAGGATGTGATTTAAAC
TTTCGTTAATCTTTAGATGGATCAATGCAGTTCATTCAAACAACTTTAAA
ACGATATTCCATagtttaaaagaagtttttataTGGAAAAATGATACTCA
TCATCCCAAATTTAAACATAGATTTCGGGTATCTTGTCGGGTATAATCTA
AAAACTTGGTTTAGATTCTTTATAATAATAATTGATCTCGTGTCTCGATT
TCCAATCAATTCTGTTACGTTTTTTTCTCGGACACGCTAGACTAGAGTGT
ACTTCTGGCAAAAGTTTGCTTTTTAATGATACCTTTTGATGACGCTAAGC
CCGCGAGCTACTTGACAAGGATgcaatttttgcgaaaaaaaaactttccg
aATAACaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037650XLOC_037650Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059860-exon-scaffold_331-1491911889:1221263..1221504TCONS_00059860-exon-scaffold_331-1491911889:1221263..1221504Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1221263..1221504TCONS_00059860-exon-scaffold_331-1510915933:1221263..1221504Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1221263..1221504TCONS_00059860-exon-scaffold_331-1575043694:1221263..1221504Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1222755..1222928TCONS_00059860-exon-scaffold_331-1491911889:1222755..1222928Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1222755..1222928TCONS_00059860-exon-scaffold_331-1510915933:1222755..1222928Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1222755..1222928TCONS_00059860-exon-scaffold_331-1575043694:1222755..1222928Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1223093..1223169TCONS_00059860-exon-scaffold_331-1491911889:1223093..1223169Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1223093..1223169TCONS_00059860-exon-scaffold_331-1510915933:1223093..1223169Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1223093..1223169TCONS_00059860-exon-scaffold_331-1575043694:1223093..1223169Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1223553..1223706TCONS_00059860-exon-scaffold_331-1491911889:1223553..1223706Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1223553..1223706TCONS_00059860-exon-scaffold_331-1510915933:1223553..1223706Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1223553..1223706TCONS_00059860-exon-scaffold_331-1575043694:1223553..1223706Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1225201..1225322TCONS_00059860-exon-scaffold_331-1491911889:1225201..1225322Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1225201..1225322TCONS_00059860-exon-scaffold_331-1510915933:1225201..1225322Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1225201..1225322TCONS_00059860-exon-scaffold_331-1575043694:1225201..1225322Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1225714..1226013TCONS_00059860-exon-scaffold_331-1491911889:1225714..1226013Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1225714..1226013TCONS_00059860-exon-scaffold_331-1510915933:1225714..1226013Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1225714..1226013TCONS_00059860-exon-scaffold_331-1575043694:1225714..1226013Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1227012..1227209TCONS_00059860-exon-scaffold_331-1491911889:1227012..1227209Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1227012..1227209TCONS_00059860-exon-scaffold_331-1510915933:1227012..1227209Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1227012..1227209TCONS_00059860-exon-scaffold_331-1575043694:1227012..1227209Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1227836..1228037TCONS_00059860-exon-scaffold_331-1491911889:1227836..1228037Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1227836..1228037TCONS_00059860-exon-scaffold_331-1510915933:1227836..1228037Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1227836..1228037TCONS_00059860-exon-scaffold_331-1575043694:1227836..1228037Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1237340..1237542TCONS_00059860-exon-scaffold_331-1491911889:1237340..1237542Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1237340..1237542TCONS_00059860-exon-scaffold_331-1510915933:1237340..1237542Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1237340..1237542TCONS_00059860-exon-scaffold_331-1575043694:1237340..1237542Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1237824..1238001TCONS_00059860-exon-scaffold_331-1491911889:1237824..1238001Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1237824..1238001TCONS_00059860-exon-scaffold_331-1510915933:1237824..1238001Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1237824..1238001TCONS_00059860-exon-scaffold_331-1575043694:1237824..1238001Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1238192..1238684TCONS_00059860-exon-scaffold_331-1491911889:1238192..1238684Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1238192..1238684TCONS_00059860-exon-scaffold_331-1510915933:1238192..1238684Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1238192..1238684TCONS_00059860-exon-scaffold_331-1575043694:1238192..1238684Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1491911889:1238930..1239571TCONS_00059860-exon-scaffold_331-1491911889:1238930..1239571Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1510915933:1238930..1239571TCONS_00059860-exon-scaffold_331-1510915933:1238930..1239571Clytia hemisphaericaexon
TCONS_00059860-exon-scaffold_331-1575043694:1238930..1239571TCONS_00059860-exon-scaffold_331-1575043694:1238930..1239571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:1221263..1239571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0810952	0.0252794	0.433216	0	0.0463475	0.0548435	0.0367502	0.106167	0	0.0983619	4.57573	3.36674	0.639958	1.1653	0.0776474	0	2.04393	2.09023	0.315179	0.153465	2.27042	3.76718	10.8063	6.64989	0.334713	0.522397	0.166562	0.12759
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059860 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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