TCONS_00059866 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059866
Unique NameTCONS_00059866
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2895

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059866 ID=TCONS_00059866|Name=TCONS_00059866|organism=Clytia hemisphaerica|type=transcript|length=2895bp
TGACTTTTTAGCCTCAAAGGTATTTGAGAGTAACCGAAGACGGCTGTGGG
CTAGATAAGCCTTTGAAACACTATGGATTCATTAGAAGAGGCTAGAGATG
ATaaatacaatgaaaaacatATTCAAGATCGAAAGACTTGGTTTATATCA
GAGTGCTGGCAAGTCAAAGGCAAGTGTGGAAGAGTTCGTTTCCAATTCAA
CCCATTGTCAACTTTTCTTGGTGCTTTCGTCTTGTGGGCCATCCTTATAT
GGGCCATTACTGATGAGGAGACCAGCATTGAAAAGATCAATGTTGCGCGA
CGGTGGATCACTGATAAATGCACGTGGTTTTACATTGGCAGTCAATTTAT
TTGGGTTATCTTGATCgtttatatttatttcaaatatgGACATATCAAAC
TTGGATTATCAACAGATCAGGTAGAATACGGAGATTTCGATTATTTTGCC
ATGATCTTTACAACCGGTATATGCAATGGATTGTTTTACGATGGTGCAAG
CGCTCCCATCGCTGGATATAATGATTCCACCGATAATTTACTCATCTACA
AGGGAAAGAGTAATCATATTACGCAAGCGCAGAACTCGTTGAACGTTGTG
ATGTTTCATTGGGGTTTCCATGGTTTCAGTGTGTACGTTTTACCTTGTCT
CCTCTTATCTGTTCTTTGCTATCGTAAAGGTTTACCTCTGACAATGCGTT
CCTGCTTGTACCCTGTGTTCGGTAAGAAGATCTTGGGACGATTAGGTGAC
GTCATCGACAGTATCTCCATTATTTGTATGGGGTTCGGAGTAGCTACCTC
CTTCCTATTAGGTGCCATCATGGTGGTAGTAGGGTTACAACCTATCTTTC
CTGAACTAGCTGACAACCAGACTACAAGATTGATTGCGTTATGGGCTATC
TCTATAATGTCAATGTTTTCGGCAATGAGTGGTATCAAGCTTGGTATCAG
GAGGATGTCGCAACTATGTTTCTTAACAGGAGCTTTATTCACATTAATCG
TTGCGTTCAGTGACAACCTGTGGTATTTACTCAATCTGGCTGTTCAATCG
ATTGGTTACTATTTCCAATACCTCATATCGACATCAACATTCACTAGTGC
TTTCGTTCAACAAAGAAATTATCCTAATGGCAAACAACAGGAATTTGATT
GGATGCATAAAAATACCATCTTCTATTGGGGCTGGTGGTTAGGTTGGGCA
CCTTTGGTTTCAATATTTGCTACACGGATCAGTAAAGGTCGAACAATCAA
AAGTGTGATCGAAATTGCTTTCTTAATCCCAAGCTTTGtcaattttattt
ggtttgtcGTTGTAGGAGGTGTGTCCATTGATATGGAAAATCAAGCCATT
TCCATGAGACTTCATTGCGGCATGAACAAAACAACACGTGATGCTTTAGG
AGCTCCTGATTGGCTACACAGTCTCGGTTGTATTGATGAAGACAAACGAT
TCTATATGGTAATCGAAAAATATGAAGATATCAAGATTATTCTTCAGATT
ATCGCTTTGATGCTTACCTTACTGTATTTTATCACGAGTTTCGATTCAGC
TGCTCTCGTCATGGGCACCATCTCCAGTAACGGTCTAGAGGAGCCACCAT
TGATTCAACGTATTTTCTGGTGCATCACCATAGCTGCTTGTACTTCAGCT
CTTATTGTTTATACTGAATTCACTGATCGTGCTGATGTCAATGCTTTTGC
TATTCTGGCTGGCCTTCCGTTCGCAGTTTTGATGTGTTTCTGTGCTATTT
CACTGTGGCGATTATTGAAAATGGAACCATATTGGTTTTACAATGAAGTC
GCTCACTGGGAAATGATTTATGGTCATATTGATGATATTCAAATACTGAA
AAAAGTCCTGTTAGCAATTGTTGCTCCCTGGTACTACCTAGGGCAAATGT
CAATTAAAATTAGCCTAAATCACCATGGCGACAAGAATGGTAATCATGTA
GGTGAAGGACATCCGCCCGTGTCCGCCCAAACTGCAGGAAGTCCACCCTT
ATCCAACCAAAAACGATTTTTCGCGTACTTCAAATTTGCTTTCCCATTCT
ACTTATGGATTGTTTTACTTCTTTTACAAATTCGATACCAAAAAATAAAT
AGTGTTGGCTGGGCTGTTTTTGTCGGGTTCTTGGTCCTTTCGAGTCGCAT
TCGTAGAGCTCTTCGTCGCCAGTATCGAATACAAGGAAATGTTTTCGAAG
ATATTGCGATCATGGCGATTTTCCCGTTTACCGTGGTCCAGATGTATCGA
CAGGTCACTTTCGGTGAAAGATCAATCGAAACTGGTGGACGAGCATCCAG
GCTAAACAGTGATACCACAGAAATGAAGAACAACCCATCCACCAAAAGTA
ACAGAGGACAACGCAATTTAGCCTACATACAGGATGAATCATTTTCGCCT
GAATCTCCGCCCATCTATCAATCTGGTGAAGATTTCTTAGCTGCTTAACG
TGTATTGCTCTGCAGTTGGTActcaacgttgttttaacattcACACAACA
TTATAAATTTGGATGTTAAAAGGATGTGATTTAAACTTTCGTTAATCTTT
AGATGGATCAATGCAGTTCATTCAAACAACTTTAAAACGATATTCCATag
tttaaaagaagtttttataTGGAAAAATGATACTCATCATCCCAAATTTA
AACATAGATTTCGGGTATCTTGTCGGGTATAATCTAAAAACTTGGTTTAG
ATTCTTTATAATAATAATTGATCTCGTGTCTCGATTTCCAATCAATTCTG
TTACGTTTTTTTCTCGGACACGCTAGACTAGAGTGTACTTCTGGCAAAAG
TTTGCTTTTTAATGATACCTTTTGATGACGCTAAGCCCGCGAGCTACTTG
ACAAGGATgcaatttttgcgaaaaaaaaactttccgaATAACaag
Run BLAST on NCBI

transcript from alignment at scaffold_331:1221353..1239571+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059866 ID=TCONS_00059866|Name=TCONS_00059866|organism=Clytia hemisphaerica|type=transcript|length=18219bp|location=Sequence derived from alignment at scaffold_331:1221353..1239571+ (Clytia hemisphaerica)
TGACTTTTTAGCCTCAAAGGTATTTGAGAGTAACCGAAGACGGCTGTGGG
CTAGATAAGCCTTTGAAACACTATGGATTCATTAGAAGAGGCTAGAGATG
ATaaatacaatgaaaaacatATTCAAGATCGAAAGACTTGGTTTATATCA
GAGTAGGTTTATTATCATACAATTCGAAATAAAATGCATGGTAGCTATCA
CGTCTTAAACACACACCTCTCTCTCACAGCCTCGTGAAACTCTTCcccac
agcggggataaaaatttctattgaaatctcaattctattgttccaagatt
gaaaaattcagtggggatggttttggagtgcaattattAAATGCAATTAA
AGATTgcatttcgaatggggatgaaatcaaagtcaatttcccagtggggc
aaaaattctagggtatttttcccactggggacgaaatttttgccgaATTT
TCCAGTGTGGCTGGGGTTCCAGCGgggctgtgacacaggggtgttcttAA
ATTGAGTAACGAAGCGATTCTCAGGAATGTAAACAACCCATATAAGATAT
TAaggaattatttttacatgcATGGCAAAATGGTCATTTCTAATGTTTGA
GATTTAGATATCCACGTGGAGCTTTCTTTCTTCATAAAATGTGCCTTTTC
GGTTTATTATATTTGTGACAACACGTATATCTGAGTAACTCAGTATTACC
AAGGAATTTGGATTATGTTTTATTAAAGTTCCTTGGTATTACAACTACTT
AACTGAGGACTGCAAAGTGAGATTCGAACTCACGACTTTCGCATTACTAG
TACAACTAAGGTCAATGCGCAGATATACTTGTTTCACAATACGGTAAGCC
CTTCATataagcgagtttatgtatttgcacttatgaggacggtaaagtga
ctgaagcgatttggaataacccacaGTTCTGACCCGAGAAATCGAGgatg
gtaaaagtgctgattttccgtcgtcctcagttgattAGGATGTTGACAAA
TTAGAGCCTtgccgtctccgtcgcagaaaaacacacatacataaactcag
tAATAAGGGCATATTAGTCCCATTCAGGTTCATCGAAACGCTGATTTATT
TCAACATaactgtgtcacagacccgctgggaccccagccccactagaaaa
tttagcaaaaatttcgtccccggtggaaaaataccctgaaatttcagccc
cactgggaaattgactttgatttcatccccattcgaaattcaatgtttaa
taattgcactccaaacccatccccactggatttttaaccttggaacaata
gaatttctatctatCCCATTGCGATTTCGATAGGAGTTTTTATttccact
gaggaaaaaagttccaccggggctctGAGACAGAGGTGTATTTCAATTAC
AGGTGCTGGCAAGTCAAAGGCAAGTGTGGAAGAGTTCGTTTCCAATTCAA
CCCATTGTCAACTTTTCTTGGTGCTTTCGTCTTGTGGGCCATCCTTATAT
GGGCCATTACTGATGAGGAGACCAGCATTGAAAAGATCAATGTTGCGCGA
CGGTGGATCACTGATAAATGCACGTGgttagtttaatattttttctgtAT
GTTAATAGGGTTGTTAAAGAGAATGTTCATGTCTGTAAaactatttaagc
aattttccTTCGGATATGTATGTAGGAAATCTCAGCTGTAATATGAAACT
TTGAAGTTCGAaagtttttaaactttatttcTCGTTTCAGGTTTTACATT
GGCAGTCAATTTATTTGGGTTATCTTGATCgtttatatttatttcaaata
tgGACATATCAAACTTGGTAAGTATGGACATAAAGTTTCAGTATTTTTTT
TGTTGTGTGCAGCTGAATTCTGTTGCAGTTTCAGCTGACAAAAACGTCGA
ATCAGGGGAAATGAGAGACTTTATGTTGGCATAGGGAGATTTCAAAATTC
ACGAAACGGCCGTCATTTTGATTTTGCTCGGGTACCAGAAATCAGATGTC
ATTAAAATACACggacaatagaaaaaacaaaagaaatcggaactttaatt
tttttttgtaagtcACCCTTCTCTCACACCCCTGGTCGAATCGACATCTA
ATTAAAGTCGATTGCAAAATATTACTTAtgtcactttttgaaaaaaaaag
ccGTTAATACAGTTATTAAGAACGCTTTGGTTCCATTCTCTTTTTCACAG
GATTATCAACAGATCAGGTAGAATACGGAGATTTCGATTATTTTGCCATG
ATCTTTACAACCGGTATATGCAATGGATTGTTTTACGATGGTGCAAGCGC
TCCCATCGCTGGATATAATGATTCCACCGATAATTTACTCATCTACAAGG
GAAAGTACGTTGAAAAGTATTGGGCTGcgttatttaaaggttttattttt
acatgagtgttcccgttttatatcagacacatttcatatcaggacagtgt
ctacctacaatcaaggtcataatatatgagaaaaaagggaaattccccag
gaagttctgaaaccacaatcgatttgtaagtgctctaaagtaggttcaaa
GGGCAGAGTTTTAActttgagttttaacgctagacttaagaccttaggat
ctaaggaccttaggatctgaggatccaaaagttcaaaaatagtccaataa
ggctcagaatatagcctggaagtctgccaacccctcccaagttaagatat
tcgattaaattaaagagatagcccaaaatcgactttctcgccgaaacttt
aaatcttgaaaaacgttaaaacatcgatggttaaaataaccggaattttc
aatatatttcaaccatgctTATAATTGTCATATTGTGTTGAATGTTTTTC
TTggcctctttctgaccaatcttgctccacatccgtgtcaatccaatgtg
aaaaagcttataaatcaaaattgatgagtaagcaaacgatatcattatAT
ATACATTATATATCGATATCatatcttatttaaaaacaaaacctttgatA
TTGATCCACATATGGAGGCGGAAGgaaaaataagtttaaaaaacTTATAA
TTGTGTGGATATTTCCTGGAAGGAtggcaaaatttacaaaaaaacccTGG
AAAAGGATTCTATTCCCCTTATGGAAAAATTTGCCTCTATGCggtaaagt
gagggtggacgaacaaaACTTCATCTTTTATCCCCTTTAAAGTTCAGAAT
AACTTTCGCCTCGAAATTTCGGAAACTTTCTTCGAACCTAGAAATTAGCA
TGTTGTTTCATCCGTGGAAAAAGGAAAATAGACAGCCAATGCTTTCTCAT
CCAACAACAAGCAAAACTTAAACTCCCTATAATCTCCCCTACACCACTTG
GAATTTCTTATTTGGGGACACCTCAAAAATGTTCGTCAACCGTCAACCCA
TTGTGTGGGCATGAAATGGAAATGGTCgatttattaaaaaattctaGATT
TATGATTTTCTTGACGTATATTTACATACGGGAAAAAACAGGAGTAGTTC
TTTTTTTTAACCAATATTGAGCCCCTATTGAATTTTACGTAATAAAATTA
TGacaattttaagtatttttctgtGTGGAAAATCATGAGTGATACATTAG
CTAAATAATCCAATGAAAACGCAGGGCAAGTTCACAAGTAGTTTTTGATT
TATCAACACCCTGAGTGACTTAAACTTTGGTAATCTTTTCTTTGccattt
gttttcaatttttcggaGCTTCTAAACGCATAAATTTCCAGGAACAGTAC
AGCAGCTAGACAGAAGAACTTTCTTGTTCTGGTCAAAATTGATTGATTCA
TTGTTGGATTAAGATTCTAAGAAAATGCTTACCAATTTTCTTGTCTAGGA
GTAATCATATTACGCAAGCGCAGAACTCGTTGAACGTTGTGATGTTTCAT
TGGGGTTTCCATGGTTTCAGTGTGTACGTTTTACCTTGTCTCCTCTTATC
TGTTCTTTGCTATCGTAAAGGTAGGTAAATTCgaactttattttataaga
actactATATCTTGCTTAGCCTTCACTgcttttacaagcttttttataag
aaccagtaaattttggttgGTGGTCGTGATTTTTAGGCCTAGATGATTTG
TGATGTTTATCTTATTCACTTTTTAGCTAAAAAGATGTTTTAAATCCAGT
AACTTCTGAAACCTTAAGCCTAAGCTTGTTCTTAATTGAGCCTcatgttc
taataaaaatgttttcataaAGTGAAGTTTTTAGGGCTCAAACCAGTCTT
CAATCATAAATCTTCTTACATATGAGACTCTTGTTCTTGTTctttggttc
ttataaaattattattatataaaaccCCAACcattgttttattgaaaatc
actATCTGCAGGTTTACCTCTGACAATGCGTTCCTGCTTGTACCCTGTGT
TCGGTAAGAAGATCTTGGGACGATTAGGTGACGTCATCGACAGTATCTCC
ATTATTTGTATGGGGTTCGGAGTAGCTACCTCCTTCCTATTAGGTGCCAT
CATGGTGGTAGTAGGGTTACAACCTATCTTTCCTGAACTAGCTGACAACC
AGACTACAAGATTGATTGCGTTATGGGCTATCTCTATAATGTCAATGTTT
TCGGCAATGAGTGGTATCAAGCTTGGTATCAGGAGGATGTCGCAACTATG
TTTCTTAACAGGTACAGTCAActttcgcttattcgaacttctattatttg
aatctttctgtaattcgaacttaatCTCAGTTCCCGTAAGGGAGGAACCC
TCttaaaataatttctataattcgaatctctctgttattCCGACAGATAA
GATTTCCCGTTCGAGCTAcagtaccgagtttatgtattcgagataaatcg
agggggacggtataaagcaaagctgacatAGGACCGAagtcaccgtccac
tttgctcgacgacggtaaaaacaccaagataccgtcgtctgtttaggtga
gcaaaggcgatataaagccgtacatcaactatcgactttgttttgtatcg
atttcacttaccgtcgccctcggtatcctccgatacataaactcggtagt
gTTACAGAGTTACAGTGTTCATAGTTTTTTAGTCCCAGTGAAGTATGAAA
AGAGGGTTTTCTGCCTTTctgaatttcagcaaaatttagcaaaatattga
aaacaatCTGGACTAATTTGTCGTGCTTAGTCCATTTTACTTCTGAGAGG
AAAAAATTGACCACTGCTTTTAGGATTTAAgtctttattttctatttttt
gtatTACCACTGACACTGTGGATATCGGTAGggatataaaaaaatgttgt
cTCAAAGGTTGAAGTTATTTTTCCCATTATATCTGTTTAAATTCAATTCC
TGGAGCTTTGTTCACATTGATTTTGGCGTTCACGAGTATTTAGTCACTCC
ACCCTCCTCACAAGGGTAGATAAATAAACTCGCTTATTTTCCgtcaaaaa
ttgaagttagcgaggttaagcacgggttAATTTTGACAGTAAAatgcgat
accgtaggcctgtacataacttgccaaagcagaccatgcaagtgaaatct
tatgtacaggcctacgatatcgcattggacggtctaaataaacacttgct
taacctcgctgtTACCTTTCCTATGATACCAGTTTAATTCAATAACAATT
CAATTCCAGGAGCTTTATTCACATTAATCGTTGCGTTCAGTGACAACCTG
TGGTATTTACTCAATCTGGCTGTTCAATCGATTGGTTACTATTTCCAATA
CCTCATATCGACATCAACATTCACTAGTGCTTTCGTTCAACAAAGAAATT
ATCCTAATGGCAAACAACAGGAATTTGATTGGATGCATAAAAATACCATC
TTCTATTGTAAGTTGAATTAGTATAACTACAGTAtggtctctttaactcg
aacctttataactcgaatgAACTCCGACAATTTTGTGTTCCCCGTGAGGG
TTCGAGTTGTGGAAAATCCACTGTAGTATAAAGCGGAACTCTGTGCCTCA
TTCCTGGTAGGATGGCCGATAGTGTATCTCCTTTTTGGGGGCTTTCTTGA
GGCTGTCGACAATGGAATTTGACATTACTTCAAAAGGGTTTTCTTTTCCA
CCGGCTTTTCATTCCCTTTAGCATacaaattttaaattcaagGGTTCtag
ttttcgcggtttttcgaaaaaaagcgACAATTAGTTCCTTCGAAAATTAT
TTCCCTTGTAAACTTGACTATATACAGTAGTACTGAAATCATAATATACG
AGCCTTAAATTGAAGTTGTTCTCACAAACACAGAAAAGAGTGTATCAATT
TTTCACTAAGACAGAGAATTTAACAAATCGTTTGGGACGTTTCCAATGAC
GAATTACGTTACAAAATTATGACtattatcttctttttttcgaTTCACTC
ACTTAGAGTTAATAAAACGCGATATGTAATGAAGGCCATGCAACATCTGC
TattatcattttcttttctttttctcgttTTAGGGGGCTGGTGGTTAGGT
TGGGCACCTTTGGTTTCAATATTTGCTACACGGATCAGTAAAGGTCGAAC
AATCAAAAGTGTGATCGAAATTGCTTTCATAATCCCAAGCTTTGTCAATT
TCATTTGGTTTGTCGTTGTAGGAGGTGTGTCCATTGATATGGAAAATCAA
GCCATTTCAATGAGACTCCATTGCGGCATGAACAAGTAGGTGGTCTCACG
CACTAAGATAGCTcggtttttgaaaagttttagcTACGTGGGacttattt
tacaaaataaGTTGGGACTGAACCTCGAaagtttctcaaaattttctgat
ttttctaatTTCGCATAAAATTGCACTCTTGGACTGAACtgactttttgt
atttttgttttgacgGCCCTACCTAGAACTGTTACATGTTTACTTTGGCG
GTAAACATTGCTATAAATCCAGCGTtcgtgtgaaaaccacgcgggtcaTG
CAACTTACATAAAAAAGGAGTTCAAAAATACAGCAAGATTTCATCGAAAT
ACTATCTATCTTATTTTTACTAGAACAACACGTGATGCTTTAGGAGCTCC
TGATTGGCTACACAGTCTCGGTTGTATTGATGAAGACAAACGATTCTATA
TGGTAATCGAAAAATATGAAGATATCAAGATTATTCTTCAGATTATCGCT
TTGATGCTTACCTTACTGTATTTTATCACGAGTTTCGATTCAGCTGCTCT
CGTCATGGGCACCATCTCCAGTAACGGTTagtcctttgttttttttctca
tttttgtgaCTATTCCTTGTTCTTTAATTAAACTACAACTTTGTATCAAA
ACCGCGACTGAAAcctgtccattttcctaatgaTAAAACGGTTCATAACA
GCGAATGAGGGCGGCATGGCCGAAACGAAAGATTTTCTGGGAAATAGAAT
CCTATACAAAGCGATGGTATTTTGTACAATCTAcccttttcgaaatttta
ttcTTATTCTTACAGGTCTAGAGGAGCCACCATTGATTCAACGTATTTTC
TGGTGCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGA
ATTCACTGATCGTGCTGATGTCAATGCTTTTGCTATTCTGGCTGGCCTTC
CGTTCGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGGTGAGTT
AATTATCATTAATCGGGAACTCTAGATAAGTCCCCCACCCTCCCGAACAG
TTAGCTAAAACATTTTCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCAGTGACAACCTGTGGTATTTACTCAATCTGGCTGTTCAA
TCGATTGGTTACTATTTCCAATACCTCATATCGACATCAACATTCACAAG
TGCTTTCGTTCAACAAAGAAATTATCCTAATGGCAAACAACAGGAATTTG
ATTGGATGCATAAAAATACCATCTTCTATTGTAAGTTGAATTAGTATAAC
TACAGTAtggtctctttaactcgaacctttataactcgaatgAACTCCGA
CAATTTTGTGTTCCCCGTGAGGGTTCGAGTTGTGGAAAATCCACTGTAGT
ATAAAGCGGAACTCTGTGCCTCATTCCTGGTAGGATGGCCGATAGTGTAT
CTCCTTTTTGGGGGCTTTCTTGAGGCTGTCGACAATGGAATTTGACATTA
CTTCAAAAGGGTTTTCTTTTCCACCGGCTTTTCATTCCCTTTAGCATaca
aattttaaattcaagGGTTCtagttttcgcggtttttcgaaaaaaagcgA
CAATTAGTTCCTTCGAAAATTATTTCCCTTGTAAACTTGACTATATACAG
TAGTACTGAAATCATAATATATGAGCCTTAAATTGAAGTTGTTCTCACAA
ACACAGAAAAGAGTGTATCAATTTTTCACTAAGACAGAGAATTTAACAAA
TCGTTTGGGACGTTTCCAATGACGAATTACGTTACAAAATTATGACtatt
atcttctttttttcgaTTCACTCACTTAGAGTTAATAAAACGCGATATGT
AATGAAGGCCATGCAACATCTGCTattatcattttcttttctttttctcg
ttTTAGGGGGCTGGTGGTTAGGTTGGGCACCTTTGGTTTCAATATTTGCT
ACACGGATCAGTAAAGGTCGAACAATCAAAAGTGTGATCGAAATTGCTTT
CTTAATCCCAAGCTTTGtcaattttatttggtttgtcGTTGTAGGAGGTG
TGTCCATTGATATGGAAAATCAAGCCATTTCCATGAGACTTCATTGCGGC
ATGAACAAGTAGGTGGTCTCACACACTAACATGAAGTTcaatttttgcga
agcgaatatacatgagcgaagcagttttgctatagtgtgcatgtaccttt
aaaaTCTATATACCCAGGGGAGTGCAAGACGAAAACGAAAATTTAGCTCC
TATCTGTTAAATGTGGGTTAAGTATTCAGATCCCGGTTGTTTTCGTCCAG
GTAAGAGGCGTTACAATATCGGACTGGTAGATTGTATTTAGGATGGCTTC
GTCGAGAAAAAGAACCACTCTACGGCTCCGAAAATCTCCGAGTCAGGGCA
ACTTCCATAAAAAATATTCCGTCGTTCCCGTATATTATTAACTTCTTTAC
TCCCGCTCCATATCAGAAAGCTGATTGGTTCGGAAAACCAGAGCGCGGTC
GAAGCGTTCAAATATCAGAAAGCTGNTGAACTCTGTGCCTCATTCCTGGT
AGGATGGCCGATAGTGTATCTCCTTTTTGAGGGCTTTCTTGAGGCTGTCG
ACAATGGAATTTGACATTACTTCAAAAGGGTTTTCTTTTCCACCGGCTTT
TCATTCCCTTTAGCATacaaattttaaattcaagGGTTCtagttttcgcg
gtttttcgaaaaaaagcgACAATTAGTTCCTTCGAAAATTATTTCCCTTG
TAAACTTGACTATATACAGTAGTACTGAAATCATAATATACGAGCCTTAA
ATTGAAGTTGTTCTCACAAACACAGAAAAGAGTGTATCAATTTTTCACTA
AGACAGAGAATTTAACAAATCGTTTGGGACGTTTCCAATGACGAATTACG
TTACAAAATTATGACtattatcttctttttttcgaTTCACTCACTTAGAG
TTAATAAAACGCGATATGTAATGAAGGCCATGCAACATCTGCTattatca
ttttcttttctttttctcgttTTAGGGGGCTGGTGGTTAGGTTGGGCACC
TTTGGTTTCAATATTTGCTACACGGATCAGTAAAGGTCGAACAATCAAAA
GTGTGATCGAAATTGCTTTCATAATCCCAAGCTTTGTCAATTTCATTTGG
TTTGTCGTTGTAGGAGGTGTGTCCATTGATATGGAAAATCAAGCCATTTC
AATGAGACTCCATTGCGGCATGAACAAGTAGGTGGTCTCACGCACTAAGA
TAGCTcggtttttgaaaagttttagcTACGTGGGacttattttacaaaat
aaGTTGGGACTGAACCTCGAaagtttctcaaaattttctgatttttctaa
tTTCGCATAAAATTGCACTCTTGGACTGAACtgactttttgtatttttgt
tttgacgGCCCTACCTAGAACTGTTACATGTTTACTTTGGCGGTAAACAT
TGCTATAAATCCAGCGTtcgtgtgaaaaccacgcgggtcaTGCAACTTAC
ATAAAAAAGGAGTTCAAAAATACAGCAAGATTTCATCGAAATACTATCTA
TCTTATTTTTACTAGAACAACACGTGATGCTTTAGGAGCTCCTGATTGGC
TACACAGTCTCGGTTGTATTGATGAAGACAAACGATTCTATATGGTAATC
GAAAAATATGAAGATATCAAGATTATTCTTCAGATTATCGCTTTGATGCT
TACCTTACTGTATTTTATCACGAGTTTCGATTCAGCTGCTCTCGTCATGG
GCACCATCTCCAGTAACGGTTagtcctttgttttttttctcatttttgtg
aCTATTCCTTGTTCTTTAATTAAACTACAACTTTGTATCAAAACCGCGAC
TGAAAcctgtccattttcctaatgaTAAAACGGTTCATAACAGCGAATGA
GGGCGGCATGGCCGAAACGAAAGATTTTCTGGGAAATAGAATCCTATACA
AAGCGATGGTATTTTGTACAATCTAcccttttcgaaattttattcTTATT
CTTACAGGTCTAGAGGAGCCACCATTGATTCAACGTATTTTCTGGTGCAT
CACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTATACTGAATTCACTG
ATCGTGCTGATGTCAATGCTTTTGCTATTCTGGCTGGCCTTCCGTTCGCA
GTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGGTGAGTTAATTATCA
TTAATCGGGAACTCTAGATAAGTCCCCCACCCTCCCGAACAGTTAGCTAA
AACATTTTCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
ACCAAGCCAGAGCTTCCCAAGATTAAAAGGGGGTTTCCCAAATTTTAGAT
GGAGTTTCTCAAATACACGGGCTGTAATAGTGTAAAATTATATCTAATCA
AGtacaatgcagtcaaaacacgTGATTActcaaaaaagttcacgtgatct
TATTCCCATGTTAATTaattgctttacaacttacagctgataactttgtt
agtgtcaataaattcgaagcaatcagaaataaatgtcatgtaacaagcac
ataaaaatttcgagtaaaagcgtgatttttcttcagactttaattttgca
acctgtgtattttttagtagaaactaaaaaaaatttgggaGACACCCAGC
TTGATTTTGGGAAACTCCGTTTAAAATTATTGGGAAACTCCGTCTAAAAT
TTGGGAAGCTCTGGCTTGGTTTGAGAAACTCCATTTAAAATTTGGGAAAC
TCCGTCTAAAATTTGGGAAGCTCTGGCTTGNTATAAGAGAGTGAGCAAGA
ACATGAACTTGGCCTTTTTGCATGCTTTGAGATGGGGACGAACATATTCA
AGTTATGGATAATCTGGAAGAATTTATCCCTCCTTCAGTGGAAAAGAGAA
CTGATTGTTTGTCGTTGTTGTTGAGAAATCTTGACTTGGCTGCTCGAAAA
TATGTGGGCTCTGGTTGCTTGCTGTTATAAATATGCATTTGATGGCCAGG
ATAAAGTAAATATTGANTAACTCCATTTAAAATTTGGGAAACTCCGTCTA
AAATTTGGGAAACTCCGGCTTGATTTGGTTGAAAAGAAAAAGCTGAAACT
ACGATGGccctgaaggctcaaaatttctcttgaaaaaacaaccagaGTTT
CCCAAAATCAAGCTGGAGTTTCCCAAATTTTAGACAGAGTTTCCCAAAAC
CAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTTTGGTTGTATGCAAGGGACTCTAAAATAAAGACTAGATTTGATATCAa
catttacatgtaaaaatcttcGAAACCATGAATACTATCATCGATTCACC
AATCATTTACTGAGGAAAGACTGTCTACCCTGGGATTCGGCAATCTCCAT
TAACccgacctcgacctcgaccctgacccttgaaaaaggcctaccctcga
cccttggaaaaaagccgaccctcgaccaaaatacaataaaaagccgaccc
tgggtaaaaaaacagtttttctggcagtgttttttttaAGGGTCAAAGTC
GAGGTCGAGGTCGGGTTAATGGAGATTGTCCTGGGATTCTAACATAATAA
AAAACTATTATGGCAGGGGGGATTcgaatgtttgtttttatttaaacatt
cgaaattcgaaagaTTAGAAAGTTCGATTTTCGAACACGAGGAATTTAAA
ACCGGAAGTAAAATGagtcaaaataaaaaccaaaattgaaaataatttac
tttCTAGGTCTAGGTGGAAAAGCTTTCCCGAACAAAAGACgcgattttaa
tattttcttcgaACATTTTTTACTTACCTTACATGAGTATTAGGAGACGT
GTAATTAAGtgaattaacacgaattgagaaatttcatgttaatttcaagg
ccgttaaataaATTATGAATCATTTTTGTTTGGTGAGACCCCTATAACGT
TAGAAAAAAGAACTTATCGGGCTCATTCAATACTTTCTAtctttttgctt
gcaacttgcgaatttagTGACCTGCctcgatcgcttcgcaacttttatac
atatacggcttgtttATTCAGTCGCGATAAGAAATCATGCACTCTAATTT
ACAGAAGTGAAGAAAAGCTTAAAATTCAACTCCACAGTACTACCCTTTGC
AGAAATAAGCGCAGAGAAAGCCTTCTGTAGGAGCACGTGGTACATTACTA
AAGCACAAGGATATTGAACTTTTATCCCATTGACTTCAAatccccgaagg
ggctagacccgaaactcctggatgagaaatgaagccgcttatttcccatc
caaaacgcgtgaCCTTTCAAGCTGAAAGTAAAGCCTAtagctagattttg
aaaaatatgttgcgcgaaaagaaaaaaagggcTAGTTTCAATCCGTCATC
TTAAGTGCCGCGCAAATCTtaaagtttcactttttcttgcttgtgaaagg
ttaaagattcctATTTAGTCCCNCGAAAAATATGTCGCGCGAAAACAAAA
AAAGGGCTAGTTTCAATCCGTCATCCTAAGTGCCGCGTAAATCTtaaagt
ttcactttttcttgcttgtgaaaggttaaagattcctATTTAGTCCCTTC
TGCGGGGGCTTCAAACTCGATGTTTTGTCCGTCATTAGCCTCGGCTTAGT
TAAGATTATCATAAAGGTAGACAAAAGTCCACAACGAGGGGGACACTTtc
gattacacgcttttttataagaatatactttataagaatattcatgatga
aattgatgAGATtaaccaaaaaaattagaaaatgccGAGAATAAACCATC
ACGAAAGGTGACAGCTGAACCTAAGAATGacatttttagagtatttttga
ctttaaattgccaattattcccCTGTAATGCTCaaaacttttacaaaagt
gccattttcctttttttttactaGANATTATTCCCCTGTAATGctgaaaa
cttttacaaaagtgccattttcctttttttttactaGAACAACACGTGAT
GCTTTAGGAGCTCCTGATTGGCTACACAGTCTCGGTTGCATTGATGAAGA
CAAAAGATTCTTCATGGTGATCGAAAAATATGAAGATATCAAGATTATTC
TTCAGATTATCGCTTTGATGATTACATTACTGTATTTTATCACGAGTTTC
GATTCAGCTGCACTCGTCATGGGCACCATCTCGAGTAACGGTTAGTCCTT
TGTTTNTTCAGCTGCACTCGTCATGGGCACCATCTCCAGTAACGGTTAgt
cctttgtttttttctcatttttgtaaCTATTCCTTGTTCTTTAAACTACA
ACTTTGTATCAAAACCGCTACTGAAACTTGCCCATATGATAAAACGGATC
ACAACAGCGAATGAGGGCGGCATGGCCGAAACGAAAGATTTTCTGGGAAA
TATAATCCTATACAAAGCGATGGTATTTTGTACAATCTactcttttcgaa
attttattcTTATTCTTACAGGTCTAGAGGAGCCACCATTGATTCAACGT
ATTTTCTGGTGCATCACCATAGCTGCTTGTACTTCAGCTCTTATTGTTTA
TACTGAATTCACTGATCGTGCTGATGTCAATGCTTTTGCTATTCTGGCTG
GCCTTCCGTTCGCAGTTTTGATGTGTTTCTGTGCTATTTCACTGTGGCGG
TGAGTTAATTATCATTAATCGGGCACCCTCCCGAACAGTTAGCTAAAACA
TTTTCGCACGGGAAATTGAATCAATCCAACTAGCTCCTTTTAAAATCAAA
CCCTTGGCAGGTACCAAGATGAACGTTCTGTTTGAAAGAATATTCATTAA
AGCAAAGGTAACATATACCAAACATGTATATTTTCATAGATTATTGAAAA
TGGAACCATATTGGTTTTACAATGAAGTCGCTCACTGGGAAATGATTTAT
GGTCATATTGATGATATTCAAATACTGAAAAAAGTCCTGTTAGCAATTGT
TGCTCCCTGGTACTACCTAGGGCAAATGTCAATTAAAATTAGCCTAAATC
ACCATGGCGACAAGAATGGTAATCATGTAGGTGAAGGACATCCGCCCGTG
TCCGCCCAAACTGCAGGAAGTCCACCCTTATCCAACCAAAAACGATTTTT
CGCGTACTTCAAATTTGCTTTCCCATTCTACTTATGGATTGTTTTACTTC
TTTTACAAATTCGATACCAAAAAATAAATAGTGTTGGCTGGGCTGTTTTT
GTCGGGTTCTTGGTCCTTTCGAGTCGCATTCGTAGAGCTCTTCGTCGCCA
GTATCGAATACAAGGAAATGTTTTCGAAGATATTGCGATCATGGCGATTT
TCCCGTTTACCGTGGTCCAGATGTATCGACAGGTTACTACAAATTATACT
TTTAAATCTTGAATTGACGTTTTTCGTACCCCATCGTATGAGTTTTAGga
aaaaaggatcaaaatctAAATCAAATATCACTACGGATGTTACTTGCCAT
tgcgaaaagattttttcaatatgTAGTTAAATTcccttttcatttgaaat
aagtttttcttttttcaaaactacggTACTCATCGCCTGACCCATGAAGT
TATTGCCTTTTTCTCGCGTCATTTCAGGTCACTTTCGGTGAAAGATCAAT
CGAAACTGGTGGACGAGCATCCAGGCTAAACAGTGATACCACAGAAATGA
AGAACAACCCATCCACCAAAAGTAACAGAGGACAACGCAATTTAGCCTAC
ATACAGGATGAATCATTTTCGCCTGAATCTCCGCCCATCTATCAATCTGG
TGAAGATTTCTTAGCTGCTTAACGTGTATTGCTCTGCAGTTGGTActcaa
cgttgttttaacattcACACAACATTATAAATTTGGATGTTAAAAGGATG
TGATTTAAACTTTCGTTAATCTTTAGATGGATCAATGCAGTTCATTCAAA
CAACTTTAAAACGATATTCCATagtttaaaagaagtttttataTGGAAAA
ATGATACTCATCATCCCAAATTTAAACATAGATTTCGGGTATCTTGTCGG
GTATAATCTAAAAACTTGGTTTAGATTCTTTATAATAATAATTGATCTCG
TGTCTCGATTTCCAATCAATTCTGTTACGTTTTTTTCTCGGACACGCTAG
ACTAGAGTGTACTTCTGGCAAAAGTTTGCTTTTTAATGATACCTTTTGAT
GACGCTAAGCCCGCGAGCTACTTGACAAGGATgcaatttttgcgaaaaaa
aaactttccgaATAACaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037650XLOC_037650Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059866-exon-scaffold_331-1491911889:1221353..1221504TCONS_00059866-exon-scaffold_331-1491911889:1221353..1221504Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1221353..1221504TCONS_00059866-exon-scaffold_331-1510915933:1221353..1221504Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1221353..1221504TCONS_00059866-exon-scaffold_331-1575043694:1221353..1221504Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1222755..1222928TCONS_00059866-exon-scaffold_331-1491911889:1222755..1222928Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1222755..1222928TCONS_00059866-exon-scaffold_331-1510915933:1222755..1222928Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1222755..1222928TCONS_00059866-exon-scaffold_331-1575043694:1222755..1222928Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1223093..1223169TCONS_00059866-exon-scaffold_331-1491911889:1223093..1223169Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1223093..1223169TCONS_00059866-exon-scaffold_331-1510915933:1223093..1223169Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1223093..1223169TCONS_00059866-exon-scaffold_331-1575043694:1223093..1223169Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1223553..1223706TCONS_00059866-exon-scaffold_331-1491911889:1223553..1223706Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1223553..1223706TCONS_00059866-exon-scaffold_331-1510915933:1223553..1223706Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1223553..1223706TCONS_00059866-exon-scaffold_331-1575043694:1223553..1223706Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1225201..1225322TCONS_00059866-exon-scaffold_331-1491911889:1225201..1225322Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1225201..1225322TCONS_00059866-exon-scaffold_331-1510915933:1225201..1225322Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1225201..1225322TCONS_00059866-exon-scaffold_331-1575043694:1225201..1225322Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1225714..1226013TCONS_00059866-exon-scaffold_331-1491911889:1225714..1226013Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1225714..1226013TCONS_00059866-exon-scaffold_331-1510915933:1225714..1226013Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1225714..1226013TCONS_00059866-exon-scaffold_331-1575043694:1225714..1226013Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1227012..1227209TCONS_00059866-exon-scaffold_331-1491911889:1227012..1227209Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1227012..1227209TCONS_00059866-exon-scaffold_331-1510915933:1227012..1227209Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1227012..1227209TCONS_00059866-exon-scaffold_331-1575043694:1227012..1227209Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1230109..1230310TCONS_00059866-exon-scaffold_331-1491911889:1230109..1230310Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1230109..1230310TCONS_00059866-exon-scaffold_331-1510915933:1230109..1230310Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1230109..1230310TCONS_00059866-exon-scaffold_331-1575043694:1230109..1230310Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1231768..1231970TCONS_00059866-exon-scaffold_331-1491911889:1231768..1231970Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1231768..1231970TCONS_00059866-exon-scaffold_331-1510915933:1231768..1231970Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1231768..1231970TCONS_00059866-exon-scaffold_331-1575043694:1231768..1231970Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1237824..1238001TCONS_00059866-exon-scaffold_331-1491911889:1237824..1238001Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1237824..1238001TCONS_00059866-exon-scaffold_331-1510915933:1237824..1238001Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1237824..1238001TCONS_00059866-exon-scaffold_331-1575043694:1237824..1238001Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1238192..1238684TCONS_00059866-exon-scaffold_331-1491911889:1238192..1238684Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1238192..1238684TCONS_00059866-exon-scaffold_331-1510915933:1238192..1238684Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1238192..1238684TCONS_00059866-exon-scaffold_331-1575043694:1238192..1238684Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1491911889:1238930..1239571TCONS_00059866-exon-scaffold_331-1491911889:1238930..1239571Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1510915933:1238930..1239571TCONS_00059866-exon-scaffold_331-1510915933:1238930..1239571Clytia hemisphaericaexon
TCONS_00059866-exon-scaffold_331-1575043694:1238930..1239571TCONS_00059866-exon-scaffold_331-1575043694:1238930..1239571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:1221353..1239571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0144062	0	0	0.0819675	0	0	0.0613117	0	0	0	0.11467	0	0	0	0	0	0	0	1.52664	1.83066	0	0	0.231289	1.86897e-10	0	0	0.226525	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059866 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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