TCONS_00059889 (transcript) - C. hemisphaerica

Overview
NameTCONS_00059889
Unique NameTCONS_00059889
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1858

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00059889 ID=TCONS_00059889|Name=TCONS_00059889|organism=Clytia hemisphaerica|type=transcript|length=1858bp
CCAGGTTAGAATCTAGTAATATAAATAGTACAAAAATGACTTGATTACAG
AAGCACCCGAATTCTGATTGAACAACTAAATGTCTTTTGAAATGGATCGT
GTTGAGAAAGGGAAAGAGGTGAAAGGTGAAAATTCTGATCTTTACTCTTA
TGATGCAAGTAGTAATCACGAAGCCAATCATGATCGTCCAAAAGCAGACC
TTTGTTGTTGTGCATGTCTGCCAAAACGTTACCTGGTCGCTATCATGGCT
TTTTTTGGATTTGTTAATGTTTACGCATTAAGAGTAAATCTTAGTGTAGC
TATGGTGGCAATGGTATCCAATAGGACAGCCAAATATGCAAATGGGACTG
AGTATACTGTgAGTCCAGAACTTGACTGGAGTCCAAAACTTCAAGGATTT
GTTCTTAGTTCATTTTTCTATGGTTATATTATCACACAAATACCTGGTGG
CTGGCTTGCTACAAAATATGGTGGTAAAAACTTGTTTGGTTGTGGTGTCC
TAATGACAGCTCTTTTTACATTGATTACACCACCTGCAGCTAGATGTAAT
GTTTATTTACTGGTGGCCGTAAGAATGGCGGAAGGATTATTTGAGGGTGT
AACATTCCCAAGCATTTATGCAATCTGGAGAAAATGGGCTCCACCTTTAG
AAAGAAGTAAACTTGCAACAATCTCATTTTCAGGACCCTTTGCTGGGACA
GTACTAGGAATGCCACTATCAGGTGTTATTGCTAATTCCTTTGGATGGCC
ATGGGTCTTTTATACTTTTGGATTGTTTGGTGTGATTTGGAGTTTCTTTT
GGTTTGCACTGGTGACAGACTCTCCTTGTGATCATCCGAAAATCTCTAAA
GAAGAATTAGATTACATTCAAATCTCTTTGAAGCAAGATAAACCGGAAAA
ACAGGTTGAAAATATACCTTGGAAAGACTTTATAACCTCGTTGCCAGTAT
GGGCAATCATTATTGCACACATGACCGAAAACTGGGGATGGTACACATTA
TTGACACAACTTCCAACATATCTGAAAAGCGTGCTGGATTTTAATCTACA
AGCTGCTGGATTTTTAGCTGCATTACCTTACTTGGCTATGGTGATTGTGG
TCCAGTGCGCTGGTCGGTTGGCTGATTTCTTGAGGAGCAGAAATATGATG
AGCACTACCGCTGTCCGAAAGATGTTCAATTCTATAGGTTTCTTCTCACA
GGCTTTATTCATGGTCATCGTTGGTTACACCAAGAATAAGGACTTGGCAA
TCATTGGATTGACCTTAGCTGTTGGATTAGGTGGTTTTGCATGGACGGGT
TTTCCAATCAACCACTTGGATATCGCACCACGTTATGCCTCCATTTTGTT
TGGTATTAGTAATTGCTTCGCAACGCTACCTGGTATTATAAGTCCATTGG
TCGTCGGATTGATTACTCCACATGAGACACAAGAAGAATGGCGAGTTGTT
TTCTTCATTGCTGCTTCAATCTACTTATTTGGTTTATTGTTTTACTGTAT
CTTTGCGTCTGGTGAGAAACAAGAATGGGCTGATGGCAATCAATACTTCA
ACCATACCAATGATGATGGTGAAGAGGGTCATGAATTGCTGGCTAACAAG
AGTGGCGTTGACGAGGAGGATGAGTAAATATGGTTTGTGAACAGTTGTGA
ATGGTTTTCTGTTATTTGGTTGGGGTTTGGTTGGTTTTCTGTCCTTTCTT
TTCGTCGACACTTAAGATGTTGAGCCACTCATTGAGTGGAAAATGGTATT
GGCGAAGGGCTATAAACTGCTGCTCAAAAGTTGTTTGGTTGAGGATGAAT
AAatatttgcttttttatttggtttggccGAGTGCATGACCTTTTTTCTG
CTCTGCCT
Run BLAST on NCBI

transcript from alignment at scaffold_331:315801..329279-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00059889 ID=TCONS_00059889|Name=TCONS_00059889|organism=Clytia hemisphaerica|type=transcript|length=13479bp|location=Sequence derived from alignment at scaffold_331:315801..329279- (Clytia hemisphaerica)
CCAGGTTAGAATCTAGTAATATAAATAGTACAAAAATGACTTGATTACAG AAGCACCCGAATTCTGATTGAACAACTAAATGTCTTTTGAAATGGATCGT GTTGAGAAAGGGAAAGAGGTGAAAGGTGAAAATTCTGATCTTTACTCTTA TGATGCAAGTAGTAATCACGAAGCCAATCATGATCGTCCAAAAGCAGACC TTTGTTGTTGTGCATGTCTGCCAAAACGTTACCTGGTCGCTATCATGGCT TTTTTTGGATTTGTTAATGTTTACGCATTAAGAGTAAATCTTAGTGTAGC TATGGTGGCAATGGTATCCAATAGGACAGCCAAATATGCAAATGGGACTG AGTATACTGTGGTAAGTTTTTAAAATTTTATCAGGTTTTTGAAACTCAAG CTTGTTTTAAGAAAACAGCTGTTCATTTAGTAGGGAGATTTCGTTTTGAA AACCTTTCATATGGCTGAAGTTTGGATCAATAAGAAATGTTATTTCAGCC TTCTGATTACAGGGCTGTTTTTTTCCTTTTTCTTAAGCAGAGCTCTAAAC TCTAAACTTCTTGATCCAGTTTTAGAAAAATTCTTCTTTTAATAATAAAG ATGATTTATACTTCTCTATACTTCCCTTCGAAATTCTTTTTACAGAGTCC AGAACTTGACTGGAGTCCAAAACTTCAAGGTATTGATATTGTAATTTCTT TAAAGCTACTCATACTTTCTTTAATTCAGGCTCTGAGTTTCAAGATAGGC ACAGATCTTCATTAAATAAAACAACTTAGCTCTGCAAATAAGTGAATAGT CATACATTCATTGCTTAAGTTATCATTATGCTTACTAAGGTTATTATAAT AAGTCAATAGCAATGAACTTGACCAAAGCAATGTTAATTCTTATTGTTAA ACATGTTTCGATATCTAGTATCATCATCATTAATTATTATAGTGTTCTAA AAATAAATAAAAATTAGGATATTAAAAGTGTAAGCATAATTGTAAAATGA GACGAAGTACTAAGGACAAAAGCCAGATAAGTCAAACTATCAAATTAAGA TCATTAATATGTCTTTCTTTTTCAGGATTTGTTCTTAGTTCATTTTTCTA TGGTTATATTATCACACAAATACCTGGTGGCTGGCTTGCTACAAAATATG GTGGTAAAAACTTGTTTGGTTGTGGTGTCCTAATGACAGCTCTTTTTACA TTGATTACACCACCTGCAGCTAGATGTAATGTTTATTTACTGGTGGCCGT AAGAATGGCGGAAGGATTATTTGAGGTTAACAATTTTTTTATCTTATCAT AATGAATTTTGAGAATGAAAATTATTATTCTGGATTCTCTAATTCTCAAA CCTCCATTATGTTTAAGAGGAGATCGTAATCCTCTTTGTGAATGAGTATT ATTATTAGGTTATTGTAGATTTCACCCATTTTGGAATGCAATATTTAAGC AGATATTCGACAATAAAAATCGGATATCGAAAATCATTCAAGTCGACCTT GATGAGCAGAAAAGCCAATTAGCAGAAAAGCATTTTAATTTTTCCCTATT TCATTCAGTCTTCCCTCTTTGTAAGACATTTTCGAACGTTTTTCTTATTT AAGAATGTCAATTTCATTGGTTTTTTTCTCTTTCATTATAAAACGTTCAA ATTTCCTTTCTCTTTTGTTAAAAAGAACTTCCTTTTATCTGTTTTTATAT ATGTGACATTTAAATAATTATTAGATCAAAAATCTATTTTCTTTATGCTC GTTGCTACAGAAGAGATATTTTGCTATTGTTTATGTAAACTAAATATTAC TAGAAATATCGACTTTTCAGGGTGTAACATTCCCAAGCATTTATGCAATC TGGAGAAAATGGGCTCCACCTTTAGAAAGAAGTAAACTTGCAACAATCTC ATTTTCAGGTTTGAATTGTGATATATAATTAATTTTTGTTTTTTTTCAAA GTTTTTGACATTGCTTTTAGCATTTTAAAGTCAACTTGTGTGAGTATAGT CCAGCATACTCCAACGTGGAGTTCTGTTGAAAATTTGAACAAACTTTTTA GTTTACAACACGCCTAAACAAAGAAATGTACTAGCACAACATAATAGAGA ACTGGTCTAGAATAACCTCATCATTTAATATCAAATTCATAATGATTGAA ATAAATTAAATGTTTCAATACGTCCATTTTAACTGTCGAATCGTTTTCAT TATATACAGGACCCTTTGCTGGGACAGTACTAGGAATGCCACTATCAGGT GTTATTGCTAATTCCTTTGGATGGCCATGGGTCTTTTATACTTTTGGTAG GTTTGTATAATAACTACTGCAATAAGATTTTATATTGGACGATGAGAAGT ATCTGAGGCCATGTATATGGTGTTGTTTTTTTATATTTCTGAAAAATGTA GCTGCTTAGTTGTTGTTTGTCAATGATACTACAATAATATTGATATAGGA AAATGAATAGAAAACAAAATAATAACGAAACTTCTGATATTTTAATACGT TACGTTGCTTTCACCAGTATGGAAGCAAATGTTTGATTTATTTATCTCAT TGCTTCTTTAGGATTGTTTGGTGTGATTTGGAGTTTCTTTTGGTTTGCAC TGGTGACAGACTCTCCTTGTGATCATCCGAAAATCTCTAAAGAAGAATTA GATTACATTCAAATCTCTTTGAAGCAAGATAAACCGGAAAAACAGGTAAC TTTTTGAAAGTTTATTTTTTCGCCGTTATAGTCTTTTTGGCAAATAACTG ATGTTTCGAGAGTTACAATACAAGTTTAAATCTAAACCTTTATTAAATCA TGACATTATGTTTTCACAACTGGTAAAAAAGGAAAGGCCTACCATACTTT GAGACTTGATATTTATTCACGATGAAAAATTTGAAAAAAAACTTTTTTCA CACACAATGTACTGTTTGATTACGGATTACTGATTGAATAGAGAATCTTG TTGCAATTTTTTTAAATGATGAATTTGAAAATCCTGTTCTCCAAAAATGC CATCCATTTGCTTTCATTTTTCAAGGTTGAAAATATTAAAAAATTACAAG TCTAAAGATTGATCTTCNCGCTTTCATTTTTCAAGGTTGAAAATATTAAA AAGTCTAAAGATTGATCTTTACACATTATTATAAAGCGTTTATACAGAAT TACCTTTTGTATAAATACTACCCTAAATAATCCCCTAATTCTTTACAATT CATTCAAATTTTCCACATAAAAGCATTTGTCATTTTTCTTTTGATAACTG ACGATCCCATAAAACTTGAAGTATTATCATAATAGCATACCGCAGTGATT CTAAAAATAGACATCAAAATTACTGTTTGTCTGAGTTTTAATCCCATCAT CTATTGCATTAATTGCTTTTGCAAGTCAATCACACTTATTGACAATACAA AAGTAATAAGTATACATTAGTGCAGGATCCGTTGATTCATTACCTGTAAG TAATACGCACTTGATTCACACAAAAGTAATAACTTGCACGCATTACGAAT CAAGATGAAAAGGATTGTGGGATTGAATTTCGGTCAAATGTTAAAAGTAT TAATTATGACGTTTGCATAGTGGTGTGCTATTCAAACTTTGTTTTTTTTC TTGTACATAAGGTTGAAAATATACCTTGGAAAGACTTTATAACCTCGTTG CCAGTATGGGCAATCATTATTGCACACATGACCGAAAACTGGGGATGGTA CACATTATTGACACAACTTCCAACATATCTGAAAAGCGTGCTGGATTTTA ATCTACAAGCTGTAAGTTCCATTATCGTTGATACTGTATATGGTTTTTTA TGAGAACATTTTATGTCAGTTTTAGCCAAAGTTTATAAGAGAAATCTCAG CCTCAGATTTCAGAAATGGCTTAAGAAAACATTTAATTTCAGCCCCTTTT TGAGCTAGCGTGTTAGTGAATACAGAAAGTAAAGAAGAAAAAAACAATTA AAAACATTTTATCGTGATGAAAATAAAACTAAGAAATATTGTTCCAAAAC TTACTGGTGTTATTGGTGTTAGCAGGTTAACAACTGAGCTTTTTGTAAAA ACCAAACAGAATATTGAGTAATATTTATGCCAAATTTAATTAAACTTATC ACTCTTACACGACAGTTTCAGAAGAATTTCCAAGATTTGTTCAACATTCA GAAAAACTAGTCACATTGTAGGCAGATTCAAGGTTTTAGCTGCAATGAGA AGAAGTTTACACCCTAATATAATGGGCGGAGGTAGTACAATTATTAAAAT CAGATTCTTGTCTAATTTTTCTTTCATCGTTATTACTCTTAGGTGCCAAA TAAAATTTGAATACCGTAAAGTTGTTCTAGTGTCGACATCCCTCAACTGA CTCCCTTTCGAGAGATGGTTGGAATCACTTATTGAAAAAGGACCACTAAA CAAAGAAATTAAGTTTCAATTAGGGATTCCGACCTTCCTTTTAATCCCAG CTCTAAAAATGAGTGTCGGAATTAGAGGAGGTATGTCGACATTAGACCAA CTTACAGTAGCTTATACGTGCCTTTTTTCATTAATACGTTCTTTCAGGCT GGATTTTTAGCTGCATTACCTTACTTGGCTATGGTGATTGTGGTCCAGTG CGCTGGTCGGTTGGCTGATTTCTTGAGGAGCAGAAATATGATGAGCACTA CCGCTGTCCGAAAGATGTTCAATTCTATAGGTTTGTTAGCCCTAGTTTAG ACAGCCCACTTTTTGCCCTGCCTATTCTAATTGTGGATTAAAGTGGGCAG TAGGTTGGCTGTCTAAATTCAATGCATTGCCCTCTTTTGACGTCAATGCA ATGTTTTCTTTCAAGCTTTTCCAAGGAAAGATTTCAACTTTTTGCCCTCC TTTTGCTTACTCTAACAATTCATGATATGCACCACTGCAATGACTTCACG AAATTATGCAACTTTTCTGTGTTGTTCCACCCGATACGTCACTTTCTATT GTTTAAGTGACGTATATGGTGGAAAATTTTAAAAGTTCTCAGAAGACTCT CCAGTGGTGCATATCATGAATCAGAATTCATGATATGCACCATTGCAATG TCTTCCATTCCACCCAATAGCTGATTGGTTGAAAGTGACGTATTGACTGA TTTTACGTCACTTACAACCAATGAGCTATTGGTTCCGTGATGTAATGTCA GAAGACATTGCAGTGGTGCATATCATGAATAGGCAGGGCAGAAAGGCGGC CGTCTAAAGTAGGCCTTATTATCCTTCTTACTAATCTTTCGTCATTAGAC GACGTTCAAACAAAATGAAACCATTCTTTTGAATTCAATTTTTACGTCAC TTCTAACCAATAGAATGGCTATATTTCTTTTTGGAGCGAAACGATAGCAA GATCACAAAGTGTCAAAGCATTTTTTTTCCAAAACTGAGAAATTTAAAAA TCGGATGTGTCTTTAACATAGTGTCCTCCCTCAAACCAATTTTCCAATTT TGAATGAGTGAGGGGGGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNATTCCTTTTGCAGCAAAATTTTACGTTTGTGTCAGGTTGAAA TTTGAGAAATTTATACGGGTATATGGGGGGAACTGATATTTTCAGAATTT TCTGGGGGGAAAGCACAAAAGAACTGAACTGAAAAGTCATAGGGGGGAAA AGGAGGGGGAGATTTTAAAAAATCAAGAATTTGGTGGGGGAACAAACCCT GGAGAACACTATGATTTCAGAAAGTTTCTTTTTGTTTTAANAAGAATTTG GTGGGGGAACAAACCCTGGAGAACACTATGATTTCACAAAGTTTCTTTTT GTTTTAAATTCGAGAAATAAAGAACTAAAAATTACAATTGCGACAACATG AATTTTTGATAATTACTCAATTTTTTTCGAATATTCAGGAGCACATATGG TTGCCTCTCTCTAATTATTTCTTCAAGGGACAAGGGCTTTTCTTTTAAAT AAAGAAAGATTCGAATTATATAGTCTCGAATTATAGCTTTTTGTATTGTT TTAAAGTTAAATTTTGAAATCCATAAACCCTTTTTTTTTCTTGGAATTTG ATTATTGTCATGGAAAAATCTCCTTGTTTGGAAAGTACAACGTTTGCACT CTTTAAATATTTTGAAATGTAGCGGAATTCTATTGCTATTGTCAATACTC GCAAATATTCAGAAATTCAATAGGTCTTTATCCTAGCATCACCAGGAGGT TTGCATTGTGATTAAATTATCAATTGGAATTTTTAAAAAACTCACAAGCA TCGGACCTTCTCAACAGGGAGTTTTTTTTATTGGCTGGAGGATTATATTC CTTCAATGGGCTGAATTAGTGGTTGATATACTGATCTGTAAATTGACTTT CGCTTGTGATCTCTTCCACATTTGATCTCTAAAATACTCTTTTGTATTTT TATGTTGATGGCACAACAAAGTATAAACTTTTGGTCCATAAAAAATGATC AAAAACAGTGTCTGCGCAACGGCCAGTATGAGCATTTGTATTGCACGTGT GATATTTTTATCTCTCTGAAGAAAGTATAATGGGAACACAGTTATGTATG TGAAAGTGACTGTTAGCGTTGAATATGCAATTGACATTGCTTCATTGAAA GGCCCTGGCAAATTACGTCCTCTGTAAGCTTGGACAGCTGAAAATAGATG TTGAATAATGATTAAGAGGATTTGCGCATTGATATGAAACCCAGTGTTAC AATCTAAGGAGATTTCATGAATGGAGTGACTGACGGTTTTCGTTATCTCT GGCAATCGGACCAGCAATGACCATAGAAGGACACTAGTGTCTATGACCAG AAACGCAATAACCATCGATGATTGAATAATATTTGATTTCTTTTTATCCG AATGCGTTACCACCGTTTTAGCTCTGAATGCAGCCAATATCTTGTGTGAT TTGACTAAAATGATGATCGCTGGACATGTAGATAGTAGAAAAATAGATAT TGGTCGGAGTTGACATTTCAATAAAGATGGCTCGCCAATGAAAAGCAGAG GGATGGACACAAATTGTAAGCCAGTCACTGCTAAATGCAACAAGCAATTA TACGTATTTATTGCTTTGGCGAACAGCGAATTTATGTGGGCTAAAAGAAC TGTAATAGTAAAGAATGACACCAGGAAGCCTATACTACAAACAGATACGG TTAGTATTGGTAGTAATTGATGAAATTTGATATACTCTTTATAGTAAGGG CTGTAACAATGGCTTCGATCCTTTGATGATACCATCATTTCTGGACAGCT CTGGCAACTTTGATTTGATGTTGGTTTATCATTGTAATAATTTAAAGAAC ATTTCCGACAACTGTGTCCATACCTCGTCATCCAAGGTTGTGATTGGTTG ATTTTGCCGAAGAATGGCTCATAACCTGTCGCACAGGTAGACAAGAGACA TTTGTTAGCTCCAGGATAGCCTAGTTTGTTTTGTGATAGGTCGTAAGCAC GAAGTAGAAATTCTCTTCTCCTGCTTTTTAAGCCGTTTAGGATATCAGCT AATTTTCTTTGACCGTTTGTGAAATATTTAAATTTCCCAATGTTTGCGTG CTTGAAATCTTTAAACGTAAAAAAGGACAAGACGCCCATGTTTTTTCGAA ATTCTATTATAGCCATGATTCGTGAAACTTCAGTTTGGTATGAATCATAA CAGTACTTCGCCAAGAATGTTTGGGCTAGGTTAAGGTCCACCTCTGGTAA AGGTGACGACCATCCAACATATCTGAGAGATGGCAAATAATATGAGTACA AATTCCAATACTCGAAGTCATACCATTCTGTGTTATAGTCGAAATCGTAA GAAATCCAAGTTCTTTTTGTACCTTCGGTGTAGTTTTAGCATATAATCTG AATAGCGTATTTTGACTTTGTGAATCTCCAATAACTATAAAAATCTTAAG CTGGGTGTTTCGGTTGACTTCTTTTACAAGACTCTTAAGGGCTGTAGCGT TTGAAGAATCGATTTTATATAGTGTATGGCAAAGCTTCAATTCTTGGTAC TTTGACATTAACTTTTTATAAAAATGTTCAATAGCTACATCATAAATTGT TGTCCGGTCCTTTTCATCCAAATGAATAATACCAATATTGTCAACCTTAG ATGTGACGAGTTTGTGCAATAAATCTTCAGCATTTGATTGTAAGACATTG CTGTAAGAAGCAAGATTGTCATCAACCAGAGATGAAGTGACATCGAAATC CATATTCAAGAAACTAACAACATACTCTTCACTGTATAAGAAATACTCCA AGAAATGTGAAACCTCTTTAGATGCATAAACCAAGATGTGGATTATCTTG GACATTTGTTGCCAATCACGTAGACGATTCTTATTCCAATGTGGAATTCC CTGCACCTTATCTGATACGTAAAAACTTTGGTTTAGTTTTAATTGAACTC CAAGTTCGACAGCTTCGGAATACGTACAGAAAATATAGTTCTGGAACTCC ATATCGTTGGGGTTGATAGTATCTTTGAGATCAAATTTCGAAGTTTTAAG GACATGGTTCCAATAGCTTTGCCTCCTATTGTAAGCCTTGTCTATTGCGG TTCTACATATACTAGCGTTTGTGTAAGATGTTTGTAACGAGTGGTCCGTA GGAAATGTTTGGTGGTCCGTAGGAACGCACTCTTGGAATAAGCCTACAAA GAGCATGGGTTCGTTACCAGGCCGCATAGATTGATGGGCGAGTTTGATGA TGATAAAAAAGATTACAAGAGTAAAGATTGTCCTGAACATTTTCTTCTGG TAGAGTCTTGATTATTTGTTTGTAGTTTTTTTCTTACCAATCCAGATTTT TCCAGTTTATCCAAGCCAATAAGTATGGGGATTAGATTGTAGCTATGTGA TCAAAGTTTGAAGCAACATTCCCAATTCTGCATCATTTTTAGATTTTTTT ACGTTTTCTGTGTGGATTATTTGCCATTCAAGACTGTGGTGCTCTACGCG AAATATGTTTCTTTGCTTGGAACTAATATTGATTTTGAACTTCGATTTCT TTGTTACGGTAGCTCAAAAATATGTTAGATAGGATGAAATATAGTATTAT TTAGCACGATACGTTTTTTCATTATCCAGTGATTAGATTAGAATCTAAAA TTAGAATTCTAAAATTAAAAAAATAAAGATATCTGAGATATCATAATTCC AAACAAAATCCATTGAAATTTTTAATTAAAGTTTGACTGTTCGTGACATC ACAAATTCAATTCACGTCTCTTTTTTGTGGAGAAAAACATCTAATTGAAA AAGACACGTAAGAGGTCGAAATATCGTATTTTAATTTTGAATGAAGGTTC TTTAAAAAACAATAATTTTAAAGTGAAATTGAAGATTTTCATTTTCATTC TGAGCAAAAGAGCCTTAAGTGAGAAGCGTAAAAACTACTTTCCCTCTTTG ATTTTATGGATTCTAAAACACCCAATTTCTTAGAAGTTGCACAAAATACT CACAAAATGTTGAAATTAAGAATATTTTAAGAACCTTTTTGGAATTGAAA CTCAAAAAGGTAAGAGCATCCATAGGCTTCAAAATTTTGGGTGTTTTCCA CTACACACCTTTTTATAAGATCATCGGACAGGAAGACATTCAGGATAGAT TCAGCCTTTGTTTACGTTTTTTGCTGACAATGTATTTTAATTCTTGAAAT GTTCGATTTTTTTCAATTTGAGACATTTTGATAGCGGAAAAGTTGGATTT TCTCAACTTTTTATTTTCCGCCGAGAAAACTTCAAATTCCGCCTTGCTTA TAGATCGAACATGCGCAGATGAACCAATATAGGCGGAAAGCACTTTGCGT TTTCCGCCGAATGGAAAACGGCCTTTAGATATCTTTAAAGTCAAGGAAAA AAACGTTTTAAGTCAATAAGTGAACAGAGTAAACACATCAAGAATATTGA AGAATATTTTAACCCTTCGAGCATCTTGGGGGGGGGGGCTCAGACTGAAT CTATCCTGAATAAACGAAGTTTTGAAATATTTCTCCGATTGACTTGAAAC TTTGCAAGTGTGCGCAAATATGAATTGGCATCTTTGACATCATTGATGAT GTCATCATTTTTTTGAATGCTCAAAGTAGAACCCCCTCTAGCTTCTTTTC ATTTAAATTGTTTTTGCTCAAATTTTGCAAGGAACTCCACAGAAAATGTA TTTTAAATTTCAAGTTCATAAGCACTTGTCAATATTGAGATGTTCAGGGG AGCCTCCCCCTCCACCCAAGAAGCTTCCCCTCGTAAAAAAATAGGAAGAT GTTCGAAGGGTTAAGCTTGAAAATTACAAATAATAAGACAAACCAAGCCT CGGTCTAATTCTTATGACTTTTAACCCTATTTTTATCAGGGGGGGGTGTT TTCCACCAGGCTGGCACTCTTTTGTTAATAGCTCACTGAAAAAATTTTTT AACACTCTGAAAGTTCTTGACTTTTAATATAATCCTATTAGCAGCATGTA TACCAAATTTTACAATTATACACCGACCAGATCAGGTTTTATGACTTTTT TGTGCAGGCATATTATAAAATCCAGCTAAAACCCTGTGAAATCCAAAAAT CTTAAATTTAGCATAACTTTTGACCTAGTCATCCAACTGACTTCAAATTT TGACAGGTTTTAGGTATCAATAATAAATTCTAAAAAATATTAAAAAAATT TTCAAAAACTGCTGACGTCATCAAAAATGACGTCAGTGTTTTTTGAAAAA ATTTACTCATTTTCTGCATGGATTTTAAAGGTCAATTTTATTAGTATGTT TAAAACCGGCAAATATGTTAAAGATATTTATTTTGGCTTTTAGAAATTCA AAACAGAATTGAAAAATCTCCATTCGTTCAACTTTAATTGCTATTTTATT GAATAGTACTTTTTCATTAGTAAGCGATAAATGTGAAAGTTTGTGATGAC GTCACCACCTTTATGATGACGTCATCAACCCAAATTTTTTTCTATGAACT CCTTTTATGGTAGAGAACATTTATGCCAAATTTCAAGTCANAAATTGTTT TTGCTCAAATTTTGCAAGGAACTCCACATAAAATGTATTTTAAATTTCAA ACTCATAAGCACTTGTCAATATTGAGATGTTCAGGGGAGCCTCCCCCTCC CCCCAAGAAGCTTCCCCTCGTAAAAAAATAGGAAGATGCTCGAAGGGTTA AGCTTGAAAATCGCAAATAATAAGACAAACCAAGCCTCGGTCTAATTCTT ATGACTTTTAACTTCCTTTTCTATTTTTCCACACACAGGTTTCTTCTCAC AGGCTTTATTCATGGTCATCGTTGGTTACACCAAGAATAAGGACTTGGCA ATCATTGGATTGACCTTAGCTGTTGGATTAGGTGGTTTTGCATGGACGGG TTTTCCAATCAACCACTTGGATATCGCACCACGTTATGCCTCCATTTTGT TTGGTATTAGTAATTGCTTCGCAACGCTACCTGGTATTATAAGTCCATTG GTCGTCGGATTGATTACTCCACATGAGGTTTGTACACGCTTTTTTGTATG AAAACTATTTTTATCAGAACAGGAGCTTTTAATTAAAGTGTGTACGTCCG TATCTACTTGACGGTACTTTGAACCTTGCGCTTTATCGAGATTTTATGAT TTATAGATACTTCTATAAAATGAGCTAGTTCTCTGTCCCTGTCAAGAGAA TATCANTGTGCGCAAATATGAATTGGCATCTTTGACATCATTGATGATGT CATCATATTTTAAAATGCTCAAAGTAGAACCCCCTCTAACTTCTTTTAAG TTAAATTGTTTTTGCTCAAATTTTGCAAGGAACTCCACATAAAATGTATT TTAAATTTCAAACTCATAAGCACTTGTCAATATTGAGATGTTCAGGGGAG CCTCCCCCTCCCCCCAAGAAGCTTCCCCTCGTAAAAAAATAGGAAGATGC TCGAAGGGTTAAGCTTGAAAATCGCAAATAATAAGACAAACCAAGCCTCG GTCTAATTCTTATGACTTTTAACTTCCTTTTCTATTTTTCCACACACAGG TTTCTTCTCACAGGCTTTATTCATGGTCATCGTTGGTTACACCAAGAATA AGGACTTGGCAATCATTGGATTGACCTTAGCTGTTGGATTAGGTGGTTTT GCATGGACGGGTTTTCCAATCAACCACTTGGATATCGCACCACGTTATGC CTCCATTTTGTTTGGTATTAGTAATTGCTTCGCAACGCTACCTGGTATTA TAAGTCCATTGGTCGTCGGATTGATTACTCCACATGAGGTTTGTACACGC TTTTTTGTATGAAAACTATTTTTATCAGAACAGGAGCTTTTAATTAAAGT GTGTACGTCCGTATCTACTTGACGGTACTTTGAACCTTGCGCTTTATCGA GATTTTATGATTTATAGATACTTCTATAAAATGAGCTAGTTCTCTGTCCC TGTCAAGAGAATATCATTTAAATGCTTTTTTAATCCGAGTCCCTCTGTAT TAGATGTGGCGTCGATACCTTGCCTTGATAGTTTCAACCGAAAGACAGTG GGAAATCGAACTATTTATTCAACACGGCCCTCGTTATTCCCTATTTCTTA AAAGAAATAAGTAAATAAAACTCGTATTGTGTTTTCGTACATTTCAGACA CAAGAAGAATGGCGAGTTGTTTTCTTCATTGCTGCTTCAATCTACTTATT TGGTTTATTGTTTTACTGTATCTTTGCGTCTGGTGAGAAACAAGAATGGG CTGATGGCAATCAATACTTCAACCATACCAATGATGATGGTGAAGAGGGT CATGAATTGCTGGCTAACAAGAGTGGCGTTGACGAGGAGGATGAGTAAAT ATGGTTTGTGAACAGTTGTGAATGGTTTTCTGTTATTTGGTTGGGGTTTG GTTGGTTTTCTGTCCTTTCTTTTCGTCGACACTTAAGATGTTGAGCCACT CATTGAGTGGAAAATGGTATTGGCGAAGGGCTATAAACTGCTGCTCAAAA GTTGTTTGGTTGAGGATGAATAAATATTTGCTTTTTTATTTGGTTTGGCC GAGTGCATGACCTTTTTTCTGCTCTGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037659XLOC_037659Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00059889-exon-scaffold_331-1575043694:328919..329279TCONS_00059889-exon-scaffold_331-1575043694:328919..329279Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:328601..328634TCONS_00059889-exon-scaffold_331-1575043694:328601..328634Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:328005..328204TCONS_00059889-exon-scaffold_331-1575043694:328005..328204Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:327372..327459TCONS_00059889-exon-scaffold_331-1575043694:327372..327459Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:326984..327070TCONS_00059889-exon-scaffold_331-1575043694:326984..327070Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:326585..326718TCONS_00059889-exon-scaffold_331-1575043694:326585..326718Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:325519..325668TCONS_00059889-exon-scaffold_331-1575043694:325519..325668Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:324600..324732TCONS_00059889-exon-scaffold_331-1575043694:324600..324732Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:316592..316830TCONS_00059889-exon-scaffold_331-1575043694:316592..316830Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1575043694:315801..316232TCONS_00059889-exon-scaffold_331-1575043694:315801..316232Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:328919..329279TCONS_00059889-exon-scaffold_331-1510915933:328919..329279Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:328601..328634TCONS_00059889-exon-scaffold_331-1510915933:328601..328634Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:328005..328204TCONS_00059889-exon-scaffold_331-1510915933:328005..328204Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:327372..327459TCONS_00059889-exon-scaffold_331-1510915933:327372..327459Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:326984..327070TCONS_00059889-exon-scaffold_331-1510915933:326984..327070Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:326585..326718TCONS_00059889-exon-scaffold_331-1510915933:326585..326718Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:325519..325668TCONS_00059889-exon-scaffold_331-1510915933:325519..325668Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:324600..324732TCONS_00059889-exon-scaffold_331-1510915933:324600..324732Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:316592..316830TCONS_00059889-exon-scaffold_331-1510915933:316592..316830Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1510915933:315801..316232TCONS_00059889-exon-scaffold_331-1510915933:315801..316232Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:328919..329279TCONS_00059889-exon-scaffold_331-1491911889:328919..329279Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:328601..328634TCONS_00059889-exon-scaffold_331-1491911889:328601..328634Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:328005..328204TCONS_00059889-exon-scaffold_331-1491911889:328005..328204Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:327372..327459TCONS_00059889-exon-scaffold_331-1491911889:327372..327459Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:326984..327070TCONS_00059889-exon-scaffold_331-1491911889:326984..327070Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:326585..326718TCONS_00059889-exon-scaffold_331-1491911889:326585..326718Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:325519..325668TCONS_00059889-exon-scaffold_331-1491911889:325519..325668Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:324600..324732TCONS_00059889-exon-scaffold_331-1491911889:324600..324732Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:316592..316830TCONS_00059889-exon-scaffold_331-1491911889:316592..316830Clytia hemisphaericaexon
TCONS_00059889-exon-scaffold_331-1491911889:315801..316232TCONS_00059889-exon-scaffold_331-1491911889:315801..316232Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:315801..329279 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (1.68202 tpm) - - (8.26961 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.84541 2.0403 2.1587 1.97005 3.00469 2.03936 4.56787 5.51706 5.74625 8.26961 5.53268 4.31607 3.15875 2.89418 1.68202 2.51384 2.26071 2.71203 3.16169 4.60352 3.16697 2.88158 2.76782 3.91281 4.27463 3.82184 4.45234 3.98722 2.62237 2.78271
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059889 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
ZOOM
x 1
POSITION
0
20040060080010001200140016001800Expect = 8.32e-151 / Id = 44.82SequenceVGLU3
Match NameE-valueIdentityDescription
VGLU38.318e-15144.82Vesicular glutamate transporter 3 OS=Homo sapiens ... [more]
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