TCONS_00060010 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060010
Unique NameTCONS_00060010
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length917

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060010 ID=TCONS_00060010|Name=TCONS_00060010|organism=Clytia hemisphaerica|type=transcript|length=917bp
aaaaaatcgaaaaaattaacttgaaatttagcgtgaattttaataatttt
agaaGAATTCACGAATGTATAGAAACATCACAAATCCTGAAGACGCATGT
CGTTTTATGCTTTCTTTGAGTCACGTGACAACCAGTCATGGCAAATTGGA
ACTTTCATTCTACATCATCATATTTTTATTGATTATGTTTTCGAATATTA
CATTGATTTATGGACTggttaaaacaaaagaaatcaaaacaaatacgGCC
AGACTTCTGACTGCACTTAGTATTGGTGACCTCTTAACCGCATTGGTGCA
CATACCAACACATATCACCTTCACACATCTCCAGCGTAAATCATGTATTG
GCTACAGTATGGAATCCTTCTTCGCTGTTTTCCTTGGTACATCTGCTACG
ATTATTACTTCAGCAATGTGTCTTGATCGCTACCTCTTCATCAGCCGCCC
TTATAAACATCCCAAAACAGGAACATCGAAATATCTGGTGATAGTTTATT
TGGTCCTGGCATATTCAATATCGTTATCTTTGGCTATTTCAGTTGTGATC
GTTGCACTTAGTGATTTCGGATTTCGACTTGCTACCATTTTTAACATCAT
ATCAAGCACAATATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATA
CTTTATTGTATTCTTACATCCgaaatcaaacaaaagaaattaagaGGTTA
TCCAATTCTCACATCCAACAGAGGGGgTACAAGAGGAAGGCTACCAAAAC
TGTACTTATTATCTCCATCATACAAATTTTCACAATCACACCATGGGTTA
TCTCCTTAATTTACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAA
TATATGGATACCATTTATTACGCTCATGTCTGGTTGAGAATGCCTgtgtt
tttaaattcatttttta
Run BLAST on NCBI

protein sequence of TCONS_00060010-protein

>TCONS_00060010-protein ID=TCONS_00060010-protein|Name=TCONS_00060010-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MYRNITNPEDACRFMLSLSHVTTSHGKLELSFYIIIFLLIMFSNITLIYG
LVKTKEIKTNTARLLTALSIGDLLTALVHIPTHITFTHLQRKSCIGYSME
SFFAVFLGTSATIITSAMCLDRYLFISRPYKHPKTGTSKYLVIVYLVLAY
SISLSLAISVVIVALSDFGFRLATIFNIISSTIYVLILLTSLVVNTLLYS
YIRNQTKEIKRLSNSHIQQRGYKRKATKTVLIISIIQIFTITPWVISLIY
MTVEFGEKKYLEYMDTIYYAHVWLRMPVFLNSFF
Run BLAST on NCBI

transcript from alignment at scaffold_333:311083..315047+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060010 ID=TCONS_00060010|Name=TCONS_00060010|organism=Clytia hemisphaerica|type=transcript|length=3965bp|location=Sequence derived from alignment at scaffold_333:311083..315047+ (Clytia hemisphaerica)
aaaaaatcgaaaaaattaacttgaaatttagcgtgaattttaataatttt
agaaGAATTCACGAATGTATAGAAACATCACAAATCCTGAAGACGCATGT
CGTTTTATGCTTTCTTTGAGTCACGTGACAACCAGTCATGGCAAATTGGA
ACTTTCATTCTACATCATCATATTTTTATTGATTATGTTTTCGAATATTA
CATTGATTTATGGACTggttaaaacaaaagaaatcaaaacaaatacgGCC
AGGtatgtattttcaaaattcctttTTAGCGTCCATTTGTGATTTTAGCT
AAAGTTATAGCTACAGGTGACCCTCGCTAATTCGAACGGGGAAATCTCAT
TTGTTCGAATTGCAGAGAGATTCAAAGTATAGAGAGTTTTTCAAGAGAGT
TTCTCCATGACTGGAAACAAGCTCGAAAATTATAGAAAGactcgaataat
agaagttcgaataactgAGAGTTTACTGTATATCTGCTACAATGTAAAAC
CTATAAGGATCTCTACATAGTAACAACTGACTTTAGCTAAAAATCCCAAC
TTGAGCACGAATCTCCTTCCTCCTTCCAAAGGAACTATTGGACTATAGAA
GCAAAGGTATGTAGCTGTTCAGGGTTCCTTTTGTTCGTCTCGCCGTATGA
GGTCCATgggtcaataaaaaaaaaaataaaaaaaaaaataagttccTTGA
AAGAGTATTGTCAGTTGAAAGTAAAATTCTAATAACTTTTAGTAAGTTTA
ACTGCTGAAGATTTTTGATTGTTATCTACCATTTTAGACTTCTGACTGCA
CTTAGTATTGGTGACCTCTTAACCGCATTGGTGCACATACCAACACATAT
CACCTTCACACATCTCCAGCGTAAATCATGTATTGGCTACAGTATGGAAT
CCTTCTTCGCTGTTTTCCTTGGTAAGTTTTATATAATCTTTATTTCCAAA
TTcccagcctaaatgttcttacaaACTGGGTCAGTCTCAAAAATGATTAG
ACACTTTACTTTAATGACAATAACTCAGATTTATGCCATGTTAAAAAGTT
GTACACCGTTAGAAAGAGACTCTTTAGAAGAATTATCATAAAACCGAAAA
CtagagaagaaaatgaagattttttcttatgTTTCAAGTGCTTGGCGTAA
TGTTTGCATTTTACTGCTTTAATGAATGTCCCTTTggctatcactttcaa
aacattAATTTGTAGGTACATCTGCTACGATTATTACTTCAGCAATGTGT
CTTGATCGCTACCTCTTCATCAGCCGCCCTTATAAACATCCCAAAACAGG
AACATCGAAATATCTGGTGATAGTTTATTTGGTCCTGGCATATTCAATAT
CGTTATCTTTGGCTATTTCAGTTGTGATCGTTGCACTTAGTGATTTCGGG
TAAGGTATGATTGATTTAGACAGGCTATCGTCCTTTAGAAGAATAGGAAA
CCCGGAGTTTACTTCCAAAGCAAAGTATGGTTTGAatattagcctatttc
ataggattcgtgatTTTggtaaattatatttttctacgtcactgcagttA
GGAGGGCATACGAGGGTCCTGAACACTGAAATACCTACAGTCTTTCACAA
AATCACCACAATACCGACACATTGTTAACGGAATAccgacagcaaaattt
tttcatgttttttttcaaaattctacatGAGATAAGAGGATAAGAGGGAT
TTCTGAGAAATAGCACTTGATTCAGCACCGTTTCTCCAACGTTTTAAGCA
CAATTATCGTATCACCGAtcgaaaatttaacattttccgtcaccgaaaaA
CATCTCAAACACCGAAATACGGACTTTTTGTTgatcaccgaaataccgaa
gtaGAAAAAGGTCAATACCGACACACCGACAAACTGGTCAAGCTCTCTTT
TGCGCATTGAAATAAGCACGAATCCTATGGAATAGGCTAATCATTAGCTT
TGGATACGAATTGAATCTTTTGAGAATTGAATTGAGACTTTCTTTATCTT
CATTTTTGCGTGACAATTCTTTTCGAAAGCTGGCGTTAAATctttcaata
caccttttcgaccgtagtcgcgcgggaaTCTTTtagtccgctttatccca
ctaacaccgtcccaatccttttttgacgcatttttctattgtctattggt
GCGAAAAGAGGACTGCGACGGTTTTAGTGttataaagcggacaaaaaaat
gcccgcgcagtAATgagtggctacggtcgaaaaggtgtatccaGCGCTTT
TGTAAAAATCACAAGGGACGCTCAAGTTATACAGGAAACAAATGGCTTCA
AATCATTACTGAGGAGATTCGCCTTTAGTTTTCGGTTTTGTCTAATTTGT
CCTTTCATCTTCTGCCTGGCCATCTCCTTTTTAGATTTCGACTTGCTACC
ATTTTTAACATCATATCAAGCACAATATACGTGTTAATACTTTTAACATC
TTTGGTCGTCAATACTTTATTGTATTCTTACATCCgaaatcaaacaaaag
aaattaagaGGTTATCCAATTCTCACATCCAACAGAGGGGGTGAGTAGTT
TGAACTATGTATTTCTTAGCAGAATGTTCACatgttactgttccgtttcg
atCCGGTATGATTTTTGTTACGGATCAAGTGTGTTCATACGGAACGTTTT
GGAGCATTTCGGAgaaagaaaacggagcagtttcgttccgatgaaaaaag
tataGCGAAAGCTTTTCTATCTGTTTTGCTTTGCTGTCTTCTTTTTTGga
gtttcgaattttgacgttcgcaCTTGTTTTCGGAACCGTTTTGTTTCGGA
ACGGAACAGAACCGTAACTGAGCCGTACTGAACAATGGCCTTAGCTGAAT
GTTATTTGCACTTTGgatgaagaaaaatgaacaaggttttttactttttc
ctgTTCTAAAGCATTTTTGGATTCTTTCAGATTTCTCAATCCGACAGCTA
TGGTAACTTAACGAAATTAGCCTGCTCGATTTATGGCATATTAACAGTTT
TGATTAGATACCTTAAGGAGCCTCTTTTTGACGAACATGAACATTTTGAT
TGAAATGGTATAAAAGCTAAATTTGTCTCTTTTGGAAAATAAACCATGTC
TACATACGTACACTCTCCGAGCGCGCGTCATTTATAGGCTATGGAGACTC
AGTTTTCGATAGGACTTATATTTCGACACTTTTCAGCTGTATGAAAAAAT
TTTGCCATCATtaggatagaccttttcatgaattacgttaaggccggtct
ccgcTTTGCGTGCGCTGCGATCGCAACTTtggcttcaatcatttttgctt
ggagaaaagattacgtcataaaaacgcAGCGCGCgcttggaaaaaaagtt
gaatgtatttcaactttgttttCAAGCACGCGATCGTTACGTCATATCGC
atcaatggagttgcttcattttttttttgaccaatagcgtggaagctttg
ctcgaagaagagcgattgcagcgcgcgcaagtggagaccggcctttgcGA
AGAACACTTACAGTACCTCGTTTTTGAtatattgctatggtaattggatt
tttttttcgtaacaattagcggggaggacgtctattcgggaagACAAGAG
TAGGCTCTATTGATAAAAGTAACACTTGAAGTCTCAAGGGATATAACCAT
CTTGATGGTagtggtttcaaaacgaggcagtcgttgcactcaaaataatt
tatgaaaatgccTATTGTTATAGTTAGGTAATGAGACACGGGTgtaaaat
tttttctctttttcgaaattccaggTACAAGAGGAAGGCTACCAAAACTG
TACTTATTATCTCCATCATACAAATTTTCACAATCACACCATGGGTTATC
TCCTTAATTTACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATA
TATGGATACCATTTATTACGCTCATGTCTGGTTGAGAATGCCTgtgtttt
taaattcatttttta

Coding sequence (CDS) from alignment at scaffold_333:311083..315047+

>TCONS_00060010 ID=TCONS_00060010|Name=TCONS_00060010|organism=Clytia hemisphaerica|type=CDS|length=4260bp|location=Sequence derived from alignment at scaffold_333:311083..315047+ (Clytia hemisphaerica)
ATGTATAGAAACATCACAAATCCTGAAGACGCATGTCGTTTTATGCTTTC
TTTGAGTCACGTGACAACCAGTCATGGCAAATTGGAACTTTCATTCTACA
TCATCATATTTTTATTGATTATGTTTTCGAATATTACATTGATTTATGGA
CTggttaaaacaaaagaaatcaaaacaaatacgGCCAGACTTCTGACTGC
ACTTAGTATTGGTGACCTCTTAACCGCATTGGTGCACATACCAACACATA
TCACCTTCACACATCTCCAGCGTAAATCATGTATTGGCTACAGTATGGAA
TCCTTCTTCGCTGTTTTCCTTGGTACATCTGCTACGATTATTACTTCAGC
AATGTGTCTTGATCGCTACCTCTTCATCAGCCGCCCTTATAAACATCCCA
AAACAGGAACATCGAAATATCTGGTGATAGTTTATTTGGTCCTGGCATAT
TCAATATCGTTATCTTTGGCTATTTCAGTTGTGATCGTTGCACTTAGTGA
TTTCGGATTTCGACTTGCTACCATTTTTAACATCATATCAAGCACAATAT
ACGTGTTAATACTTTTAACATCTTTGGTCGTCAATACTTTATTGTATTCT
TACATCCgaaatcaaacaaaagaaattaagaGGTTATCCAATTCTCACAT
CCAACAGAGGGGgTACAAGAGGAAGGCTACCAAAACTGTACTTATTATCT
CCATCATACAAATTTTCACAATCACACCATGGGTTATCTCCTTAATTTAC
ATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATATATGGATACCAT
TTATTACGCTCATGTCTGGTTGAGAATGCCTgtgtttttaaattcatttt
ttATGTATAGAAACATCACAAATCCTGAAGACGCATGTCGTTTTATGCTT
TCTTTGAGTCACGTGACAACCAGTCATGGCAAATTGGAACTTTCATTCTA
CATCATCATATTTTTATTGATTATGTTTTCGAATATTACATTGATTTATG
GACTggttaaaacaaaagaaatcaaaacaaatacgGCCAGACTTCTGACT
GCACTTAGTATTGGTGACCTCTTAACCGCATTGGTGCACATACCAACACA
TATCACCTTCACACATCTCCAGCGTAAATCATGTATTGGCTACAGTATGG
AATCCTTCTTCGCTGTTTTCCTTGGTACATCTGCTACGATTATTACTTCA
GCAATGTGTCTTGATCGCTACCTCTTCATCAGCCGCCCTTATAAACATCC
CAAAACAGGAACATCGAAATATCTGGTGATAGTTTATTTGGTCCTGGCAT
ATTCAATATCGTTATCTTTGGCTATTTCAGTTGTGATCGTTGCACTTAGT
GATTTCGGATTTCGACTTGCTACCATTTTTAACATCATATCAAGCACAAT
ATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATACTTTATTGTATT
CTTACATCCgaaatcaaacaaaagaaattaagaGGTTATCCAATTCTCAC
ATCCAACAGAGGGGgTACAAGAGGAAGGCTACCAAAACTGTACTTATTAT
CTCCATCATACAAATTTTCACAATCACACCATGGGTTATCTCCTTAATTT
ACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATATATGGATACC
ATTTATTACGCTCATGTCTGGTTGAGAATGCCTgtgtttttaaattcatt
ttttATGTATAGAAACATCACAAATCCTGAAGACGCATGTCGTTTTATGC
TTTCTTTGAGTCACGTGACAACCAGTCATGGCAAATTGGAACTTTCATTC
TACATCATCATATTTTTATTGATTATGTTTTCGAATATTACATTGATTTA
TGGACTggttaaaacaaaagaaatcaaaacaaatacgGCCAGACTTCTGA
CTGCACTTAGTATTGGTGACCTCTTAACCGCATTGGTGCACATACCAACA
CATATCACCTTCACACATCTCCAGCGTAAATCATGTATTGGCTACAGTAT
GGAATCCTTCTTCGCTGTTTTCCTTGGTACATCTGCTACGATTATTACTT
CAGCAATGTGTCTTGATCGCTACCTCTTCATCAGCCGCCCTTATAAACAT
CCCAAAACAGGAACATCGAAATATCTGGTGATAGTTTATTTGGTCCTGGC
ATATTCAATATCGTTATCTTTGGCTATTTCAGTTGTGATCGTTGCACTTA
GTGATTTCGGATTTCGACTTGCTACCATTTTTAACATCATATCAAGCACA
ATATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATACTTTATTGTA
TTCTTACATCCgaaatcaaacaaaagaaattaagaGGTTATCCAATTCTC
ACATCCAACAGAGGGGgTACAAGAGGAAGGCTACCAAAACTGTACTTATT
ATCTCCATCATACAAATTTTCACAATCACACCATGGGTTATCTCCTTAAT
TTACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATATATGGATA
CCATTTATTACGCTCATGTCTGGTTGAGAATGCCTgtgtttttaaattca
ttttttATGTATAGAAACATCACAAATCCTGAAGACGCATGTCGTTTTAT
GCTTTCTTTGAGTCACGTGACAACCAGTCATGGCAAATTGGAACTTTCAT
TCTACATCATCATATTTTTATTGATTATGTTTTCGAATATTACATTGATT
TATGGACTggttaaaacaaaagaaatcaaaacaaatacgGCCAGACTTCT
GACTGCACTTAGTATTGGTGACCTCTTAACCGCATTGGTGCACATACCAA
CACATATCACCTTCACACATCTCCAGCGTAAATCATGTATTGGCTACAGT
ATGGAATCCTTCTTCGCTGTTTTCCTTGGTACATCTGCTACGATTATTAC
TTCAGCAATGTGTCTTGATCGCTACCTCTTCATCAGCCGCCCTTATAAAC
ATCCCAAAACAGGAACATCGAAATATCTGGTGATAGTTTATTTGGTCCTG
GCATATTCAATATCGTTATCTTTGGCTATTTCAGTTGTGATCGTTGCACT
TAGTGATTTCGGATTTCGACTTGCTACCATTTTTAACATCATATCAAGCA
CAATATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATACTTTATTG
TATTCTTACATCCgaaatcaaacaaaagaaattaagaGGTTATCCAATTC
TCACATCCAACAGAGGGGgTACAAGAGGAAGGCTACCAAAACTGTACTTA
TTATCTCCATCATACAAATTTTCACAATCACACCATGGGTTATCTCCTTA
ATTTACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATATATGGA
TACCATTTATTACGCTCATGTCTGGTTGAGAATGCCTgtgtttttaaatt
cattttttATGTATAGAAACATCACAAATCCTGAAGACGCATGTCGTTTT
ATGCTTTCTTTGAGTCACGTGACAACCAGTCATGGCAAATTGGAACTTTC
ATTCTACATCATCATATTTTTATTGATTATGTTTTCGAATATTACATTGA
TTTATGGACTggttaaaacaaaagaaatcaaaacaaatacgGCCAGACTT
CTGACTGCACTTAGTATTGGTGACCTCTTAACCGCATTGGTGCACATACC
AACACATATCACCTTCACACATCTCCAGCGTAAATCATGTATTGGCTACA
GTATGGAATCCTTCTTCGCTGTTTTCCTTGGTACATCTGCTACGATTATT
ACTTCAGCAATGTGTCTTGATCGCTACCTCTTCATCAGCCGCCCTTATAA
ACATCCCAAAACAGGAACATCGAAATATCTGGTGATAGTTTATTTGGTCC
TGGCATATTCAATATCGTTATCTTTGGCTATTTCAGTTGTGATCGTTGCA
CTTAGTGATTTCGGATTTCGACTTGCTACCATTTTTAACATCATATCAAG
CACAATATACGTGTTAATACTTTTAACATCTTTGGTCGTCAATACTTTAT
TGTATTCTTACATCCgaaatcaaacaaaagaaattaagaGGTTATCCAAT
TCTCACATCCAACAGAGGGGgTACAAGAGGAAGGCTACCAAAACTGTACT
TATTATCTCCATCATACAAATTTTCACAATCACACCATGGGTTATCTCCT
TAATTTACATGACAGTAGAGTTTGGAGAAAAGAAGTATTTAGAATATATG
GATACCATTTATTACGCTCATGTCTGGTTGAGAATGCCTgtgtttttaaa
ttcatttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_037762XLOC_037762Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060010-exon-scaffold_333-1491911889:311083..311334TCONS_00060010-exon-scaffold_333-1491911889:311083..311334Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1510915933:311083..311334TCONS_00060010-exon-scaffold_333-1510915933:311083..311334Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1575043694:311083..311334TCONS_00060010-exon-scaffold_333-1575043694:311083..311334Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1491911889:311870..312003TCONS_00060010-exon-scaffold_333-1491911889:311870..312003Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1510915933:311870..312003TCONS_00060010-exon-scaffold_333-1510915933:311870..312003Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1575043694:311870..312003TCONS_00060010-exon-scaffold_333-1575043694:311870..312003Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1491911889:312298..312481TCONS_00060010-exon-scaffold_333-1491911889:312298..312481Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1510915933:312298..312481TCONS_00060010-exon-scaffold_333-1510915933:312298..312481Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1575043694:312298..312481TCONS_00060010-exon-scaffold_333-1575043694:312298..312481Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1491911889:313467..313622TCONS_00060010-exon-scaffold_333-1491911889:313467..313622Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1510915933:313467..313622TCONS_00060010-exon-scaffold_333-1510915933:313467..313622Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1575043694:313467..313622TCONS_00060010-exon-scaffold_333-1575043694:313467..313622Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1491911889:314857..315047TCONS_00060010-exon-scaffold_333-1491911889:314857..315047Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1510915933:314857..315047TCONS_00060010-exon-scaffold_333-1510915933:314857..315047Clytia hemisphaericaexon
TCONS_00060010-exon-scaffold_333-1575043694:314857..315047TCONS_00060010-exon-scaffold_333-1575043694:314857..315047Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060010-proteinTCONS_00060010-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_333supercontigscaffold_333:311083..315047 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0501098	0	0	0	0	0	0.0644241	0.180939	0.253359	0.732262	1.37073	0.100119	7.63176	4.32623	2.98767	5.28264	0.789962	0.616903	2.23725	2.34112	0	0	0.11491	0	0.538007	0.336111	0	0	0.222472	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060010 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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