Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060102 ID=TCONS_00060102|Name=TCONS_00060102|organism=Clytia hemisphaerica|type=transcript|length=164bp TCAAATGCAAACGATGAAAATAATCCTAGTGAAAAGACGTCTGACAAGCG GAAAGTAAAATGCATTCAATGCAACAAGGAGGTTGCCTCTGGTGGTCTTC CACGCCACATGAGACTAGTGCATGAATGGAGCAATGAAAGGGCCAAAAAT GTGATAAACCGATT Run BLAST on NCBI transcript from alignment at scaffold_334:316645..317087+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060102 ID=TCONS_00060102|Name=TCONS_00060102|organism=Clytia hemisphaerica|type=transcript|length=443bp|location=Sequence derived from alignment at scaffold_334:316645..317087+ (Clytia hemisphaerica) TCAAATGCAAACGATGAAAATAATCCTAGTGAAGTAAGTTTTAATGTTTC
TGgacccggttgttcaaaagtcgaTTAAATTTCATCCTGATTACCAATAA
TCGAGATTTTAATACTTTCGTCGTCAACAAAGCACGAAGCAATACAAAAA
AGCATTGACATGATGCACTGATTTACCCACGAGACTTTTGTAAAAACAAT
TCAAGTGAAGAAGTCGCCCTTCTATCATAAATCAATTTACACCAACGAGA
AATATACTACTCTAAAAATTCTAGGTGATGATTATTTGTCATAATTACTT
TCCCATTTTTAGAAGACGTCTGACAAGCGGAAAGTAAAATGCATTCAATG
CAACAAGGAGGTTGCCTCTGGTGGTCTTCCACGCCACATGAGACTAGTGC
ATGAATGGAGCAATGAAAGGGCCAAAAATGTGATAAACCGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00060102-exon-scaffold_334-1491911889:316645..316677 | TCONS_00060102-exon-scaffold_334-1491911889:316645..316677 | Clytia hemisphaerica | exon |
TCONS_00060102-exon-scaffold_334-1510915933:316645..316677 | TCONS_00060102-exon-scaffold_334-1510915933:316645..316677 | Clytia hemisphaerica | exon |
TCONS_00060102-exon-scaffold_334-1575043694:316645..316677 | TCONS_00060102-exon-scaffold_334-1575043694:316645..316677 | Clytia hemisphaerica | exon |
TCONS_00060102-exon-scaffold_334-1491911889:316957..317087 | TCONS_00060102-exon-scaffold_334-1491911889:316957..317087 | Clytia hemisphaerica | exon |
TCONS_00060102-exon-scaffold_334-1510915933:316957..317087 | TCONS_00060102-exon-scaffold_334-1510915933:316957..317087 | Clytia hemisphaerica | exon |
TCONS_00060102-exon-scaffold_334-1575043694:316957..317087 | TCONS_00060102-exon-scaffold_334-1575043694:316957..317087 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_334 | supercontig | scaffold_334:316645..317087 + |
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060102 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 ( blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match Name | E-value | Identity | Description | |
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