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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060613 ID=TCONS_00060613|Name=TCONS_00060613|organism=Clytia hemisphaerica|type=transcript|length=993bp
TGCTAGATATTTGCTACTTAGTATTTGTGGTTTGTTCTTCCCCGCTAAAA
TGGCTAATCAACGAGAGACCGCGCATGCAAAACGGAGAAGAGATGGGAAG
GGCAATCGCATACAACACATGATTTCACAAATCACACAACTGTTATCTAA
AGGTTGCAGTCACGCCAAATTGAATTTTCTTGCTACTTCACTGGCCGATA
CTTTACGAATGGGTTATACGGAACACGAATTGTTGATGTCACTTTTAGAT
GATCAAGATTCTGAGTTTAATGACATCTGGATCTGCGACTTAAAATGCAA
TGTGACTTCATACCTCGCAAACGTCAGTGATTATCTTGACGGTAATACAG
AGAACGAAATACTATCATCATCCTCTCAGCAGAATGCACTTGTACAGAAT
GAAGAAGAACACGCAGGGGAGGCGACGAAACCCTTGGCCGATACACAGAA
AAACCAATATTCAGAAGTAAGTTCTGATCCTAGTCTTGAAATAACGGACA
ATGCTCCAAATTTTCGATTGATGACTTCGAAATGCTCCATAATTGATGAC
GTACCAAGTCAAACTAACGAGTTTGAAATGAGTATAATAAAGAAATGCCG
AACACTTGTCAGCCCCGGAATACTGCATCTTAGAAATAGTCTTTCGAAGC
TGGGTATGGAGCATGTCACATTTTTGTTTTCGTTCCCTCCAGCAATAAAT
TCATGGGTTGATAAATTGAATCGGGACACGGACGTCGCTCATGAACTTGC
TACTTGGTCAAAGTTTTTCGCACCTGCATTTGGGAAATGTTTATCATTAT
TTAATGTTTATCATTATCAttatttatttgacgtcaaggAGATCAGACGT
CAAATACTTTTTTGGAAGAGCTTTAgtaaaaatacaacaaaatctacaaa
aattctcaaaaatctatgaaatctcagtattttttactaaaataagcTCA
CCAAAACCAACTCAATCACATCATCAACctcaaaataaccaaa Run BLAST on NCBI transcript from alignment at scaffold_346:50474..51466+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060613 ID=TCONS_00060613|Name=TCONS_00060613|organism=Clytia hemisphaerica|type=transcript|length=993bp|location=Sequence derived from alignment at scaffold_346:50474..51466+ (Clytia hemisphaerica)
TGCTAGATATTTGCTACTTAGTATTTGTGGTTTGTTCTTCCCCGCTAAAA
TGGCTAATCAACGAGAGACCGCGCATGCAAAACGGAGAAGAGATGGGAAG
GGCAATCGCATACAACACATGATTTCACAAATCACACAACTGTTATCTAA
AGGTTGCAGTCACGCCAAATTGAATTTTCTTGCTACTTCACTGGCCGATA
CTTTACGAATGGGTTATACGGAACACGAATTGTTGATGTCACTTTTAGAT
GATCAAGATTCTGAGTTTAATGACATCTGGATCTGCGACTTAAAATGCAA
TGTGACTTCATACCTCGCAAACGTCAGTGATTATCTTGACGGTAATACAG
AGAACGAAATACTATCATCATCCTCTCAGCAGAATGCACTTGTACAGAAT
GAAGAAGAACACGCAGGGGAGGCGACGAAACCCTTGGCCGATACACAGAA
AAACCAATATTCAGAAGTAAGTTCTGATCCTAGTCTTGAAATAACGGACA
ATGCTCCAAATTTTCGATTGATGACTTCGAAATGCTCCATAATTGATGAC
GTACCAAGTCAAACTAACGAGTTTGAAATGAGTATAATAAAGAAATGCCG
AACACTTGTCAGCCCCGGAATACTGCATCTTAGAAATAGTCTTTCGAAGC
TGGGTATGGAGCATGTCACATTTTTGTTTTCGTTCCCTCCAGCAATAAAT
TCATGGGTTGATAAATTGAATCGGGACACGGACGTCGCTCATGAACTTGC
TACTTGGTCAAAGTTTTTCGCACCTGCATTTGGGAAATGTTTATCATTAT
TTAATGTTTATCATTATCAttatttatttgacgtcaaggAGATCAGACGT
CAAATACTTTTTTGGAAGAGCTTTAgtaaaaatacaacaaaatctacaaa
aattctcaaaaatctatgaaatctcagtattttttactaaaataagcTCA
CCAAAACCAACTCAATCACATCATCAACctcaaaataaccaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060613-exon-scaffold_346-1491911889:50474..51466 | TCONS_00060613-exon-scaffold_346-1491911889:50474..51466 | Clytia hemisphaerica | exon |
| TCONS_00060613-exon-scaffold_346-1510915933:50474..51466 | TCONS_00060613-exon-scaffold_346-1510915933:50474..51466 | Clytia hemisphaerica | exon |
| TCONS_00060613-exon-scaffold_346-1575043694:50474..51466 | TCONS_00060613-exon-scaffold_346-1575043694:50474..51466 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_346 | supercontig | scaffold_346:50474..51466 + |
Blast
The following BLAST results are available for this feature:
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