TCONS_00060635 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060635
Unique NameTCONS_00060635
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1043

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060635 ID=TCONS_00060635|Name=TCONS_00060635|organism=Clytia hemisphaerica|type=transcript|length=1043bp
gttGATCATTGAATATTGAGCATATTATTAGGATAGGAGgaattgttttt
tcatttgttggatatttcaaaatgttaaaatttaagAGGATGCTTTCGTC
CAGTGACAGAGAGAGTCCTGGGGCGAGACGAGGAGTTCGCCGACTTTCCG
ATCTTGAGAGACTGAGGATTTATAGACAAAGTCAAACTGATGAGtttttc
aGCACGTTAGCGATGTCATCGGAGCAATGTGCTCATCGTCTTCAAGAGTT
GATGCGTATCCCTGGTAACAGCCAGTGTGCTGATTGTGGAACTGAAGAAC
CGGAACCAAACTTTGTTTCATTGAATCTTGGTTTATTCATTTGCATCAAA
TGTTCAGGCCATCACAGGGCCCTGGGAACGAGATTCTCCGTAACGAAATC
CATATTGCTTGACACATTTGACGACGCCAAAGTCAAGCAAATGGAAGCTG
GTGGGAATATGTTAGGTGTAGAAAAATGGCAAGTAAACGTCCCAAAATGT
TGGCCAATTGTTGATAAACATTCACCAGATGATCTAATTGAGCAATGGAT
ACGAGCGAAATACGAGCGACAAGAATTCACCGAAAATCAAGTGACTGAGG
AATTAAGACCTTATTGCGTAGgTTCGAAGTATGGTTTtctgatgaaaaaa
aagaagaaggacAGTAAATGGCAACGCAGATTTTTCGTCTTATCCGCGGA
GGAAGGATATCTCAAAATGTACATCAAACAAGGGGACAATGAACCTAAAC
ACAAGATTAGCATCAGTGGAATTAATTTAATGATGGTTCATAGTGACGTC
ACCGGAGAAAAACATAGCATGCTAATCACTTTTCCCATCATGCAAAACAA
CCAATCGAAACAAAGGCATATTTATGTATATGCGGACAAAAGTTTTGAGA
TAGTTGACTGGTATCTAACAATTCGTGGAGCACGCCTGAAATTCTTAACA
CCCTATTTATACGAAGTTGAACGTCCAGTGgtTGACTTTTTGCAATCAAG
GAAATTTATCAAATCAGGATATCTACACAAAACTGGAGGCANt
Run BLAST on NCBI

transcript from alignment at scaffold_348:150751..166890+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060635 ID=TCONS_00060635|Name=TCONS_00060635|organism=Clytia hemisphaerica|type=transcript|length=16140bp|location=Sequence derived from alignment at scaffold_348:150751..166890+ (Clytia hemisphaerica)
gttGATCATTGAATATTGAGCATATTATTAGGATAGGAGgaattgttttt
tcatttgttggatatttcaaaatgttaaaatttaagAGGATGCTTTCGTC
CAGTGACAGAGAGAGTCCTGGGGCGAGACGAGGAGTTCGCCGACTTTCCG
ATCTTGAGAGACTGAGGATTTATAGACAAAGTCAAACTGATGAGGTTTGC
AACGAAATTCagagatttattttattttgttttattaaCCTTTCATCTAT
AGCTTGAAAATTtgtcccgcgaaaatttcttcccttgagGTATACCCCTG
ATTTATGTATGTATTAGATCTGCCTGTCTTAGTTAGAGCTTTTTTCAAAC
CAAGAATATAGGAGATATACAGTTCTACGTAAACagtcagaaaaaacaaa
agatataTTATCGACAGGTACTGCTCACATCCACTGTAACGATAACGTCA
AATTTCAATTGAATTGCTTAATCAGCGCGCCTTTTATGCTGACAGAgcag
aataaacaaaatattttctaaaaatctgtGTCCACGCGGTGCGTTAAAGA
TTGAAAGTTATTCCTTCTTTTGCTAAAGACTGCTGTGTAAAGGCCGGTCT
TCACTTTCGCGCAatatgagcgaaaactttttgacgtttttgtaaggtca
ttggtcggttgaaaaataaaggaattctattggtcgaaattgacgtggTT
ACACTAcattaatatctttaaaatttttgaaattttttaatcaaaaatac
attaaagaaattaactattttctttaaagtcttTTCGAAATGTTGTATca
aatcttcaatctttttttctcaaCTTATTTTCTCACTCAACAAACGACAT
GAGTGAAAGGAGGAAGGCTGCAGCACGTATTGTGCTAATTCTTTTGTAAC
GGAAATTTGAGaggaaatattcgaaaaagaaaagtcgAGCTTAAAAGGTC
TTGCTGAATACGCAAGTGGCTAAAGTTGAGGAACGAAAAAAGTGCCTACA
ACAACATATTTGCTGAACTTCTTCGTCTACGTGAccaagaagaaaagaag
aattctATATCTCAAGATGAACACAGAAACTCGTGGCTGATATCCATCca
tcatgcaaaatatttctCTTATCTTATCTTTCACCCCTATCTCATATTAG
CCATACTACGGTTTAAAAATTCCAAACGCTAGAAAATCCATTCATCGAAA
AAATGTACAGAACTATCATGTCGGTGCCTTTGATCTCGAGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGATTATACC
GCCAGGAGAGAGGaaccttataaaaagaaaaacgagaaaaaaaaaacaat
agaaaacttaggcaaaattaaacaaaaaacaagCTAAATGAGCATTGTGA
ACAATCAAAACAACGGACCCTCGAATCGACCAGTATCTTGGATAAATTTT
ACGGTTATACTTATTATATCATGATTTAGGTTGTTACTAAAATTCGAATC
CCCAAAGAGAAGTATTCTGGAGAGTATTCTTGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
aaaaaggaaaaaaggaagCACGATATCGTTCGGTTCGACAAAAGGGTGGC
ACAAAAGGAGGTCTAATCCTACGTCTTCCACCAGCATCCTCATCTTCATC
AACCTCCTCCCCCCTCTGGGGAGGAAGGATATTAGAAAGATAAGTTGGCG
CAAAGCCATTAATTATTTTATAGAAGAGAATAAGTCTGCGGCTAAGTCGC
CTGTCTGCTAGACTTTCAAGACCTAGCTCtagataaattttttctctaga
TGTTCCTCTGAAACATCCTGTTATCGCAAGACAGGCATTGTATTGAATTG
ATTCGATTTTTTCAGAGAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGGTAAAT
TGTTGAATGTAATTACTGGAGGATCTAGGTTTACCCTCCTTGTAAAGAAG
ACTTCGACGGCCTATTTAGAAGGATCAGGGTTGAAggacatcttccattg
atgagcccactCATTTATCTTCTGCAAGTCACTGTTCAGTTCTTGAGAAC
AGCGAATCTGATCAAGAATCAAGGAAAACAAAGAAGAGTCATCAGCAAAT
ATTTTTATCAAGGAAATTATATCTTCGGGGAGATCGTTAATATATACCAG
AAAAAAGAGGGGTCCCAGAATGGAACCCTGAGGAACACCTGCTGAAATCG
GGGTCCATTCAGAGGATTGACTATCAAGAACTACCCTCTGTGACcttcca
aatagaaaattttggatcAAAAGAAGGAGAGAGCCAGAAACCCCATATGA
CTTAAGCTTGAAAAGAAGGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTTGCTTTCT
TCCATTTATCAGGAAAAATACAAGactcaagagaaaattgatagATCTTC
ATAAGAGGCTTAACCAAGGATTCATCGCAAATTTTTATCACCCCTATCTC
ATATTAGCCATACTACGGTTTAAAAATTCTAAACGCTAGAAAATCCATTC
ATCGAAAAAATGTACAGAACTATCATGTCGGTGCCTTTGATCTCGagaga
agtgaagaaaaaaactttaaactcttTACCAAAAAAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNttattttctttaaaagaggaCTGTT
acacttgtaaattttttaatcataaagacttgattaaaaaatttcagaaa
ttttgaaataaattaatgtaatgtattcgcgcgaaacttttttatgacgt
aatcttttcttcaggcaaaaaaggttacgAAAAagctgtcgcccatttcg
cgcaaAAGTGGAGACCAGTCTTATACAAATGAattgaaataatgaaataa
aatgttatattaccctcttttacaaaaagtgctaagttttaatgggtaat
tttttgaattgtctgcaaaagattgaactatctaaaaattttctttctaa
attgatgtttcaaaagttataactctttttgtacgaaaattgggatgaaa
aattgctcaaaaccaatattttcaagattttgagacaaagaagtttttac
aaaaattttccgaaaatttattgttagtttggttaaagatacaccaNatt
gggatgaaaaattggtcaaaaccaatattttcaagattttgagacaaaga
agtttttacaaaaattttccgaaaatttattgttagtttggttaaagata
caccatctagcaaaaatattttcaaaatctttcttcttcgccgaaaataa
gctcctcaaagttgaaatacttgtcttcgcaaatgtcttcattttcagat
tcaggaatagtttgtctaacagaaaatgtataacatgccatagttttgtc
gGTTATCAGTCATAAAAACACATTTTATACACGacaatatgaaaaattca
cagTGGTCAAAGCccttaaggaaagaaattttcgtggaatttaatttcgt
ggttgagagaggattttttgttgaaaatatggcctatttttcccaaaaaa
ggccaattttataggtgttttttttaatcatgagaatattcgtgtttcgc
ggaatttaatttcgcggatttgtcgaaaaaccgcgaaaattgaattctgc
aaaaatttgttccgcgaaaatttgttcctGCGAAAATTTGTTCTCTTAAC
GTAAcctgtattttttcttttttctttagtttttcaGCACGTTAGCGATG
TCATCGGAGCAATGTGCTCATCGTCTTCAAGAGTTGATGCGTATCCCTGG
TAACAGCCAGTGTGCTGATTGTGGAACTGAAGGTTGTCAATATTAATTAT
CAAATAATTGTATCAAATAATTATACCCAGCAAATAATTAAtgtaaattc
tgtaaaaatccAGGAGCCCTGGTGGACCAAATAGGACAACAAGAACAATT
TTCATTATCTACGTTTTTAGCACTTTCCTCTCATCACTTAGTTTCAAATG
ATGTTTGTATAATGatcaaaattcattgtttaTGTGTAAAATAACGTCAT
TAAAAATTGGCCCCCAGCAGCTCCCAAGGCTCTTTTAGTCAATTGATGAT
ATTCATAACGTAATCTTTTCtaacggaaataccccggttttagccagtag
tggtaaattttaactagacaaaagttgtacaAAATTTGCCATTACTGGCA
AAAACCAGGGTCTTGTCGTATGaagcattacgtcatgaatatcatgaatt
gtatcTCTCAATAACTACTAGAAGTCTATTTATTGAGACTCAGAAAGCGA
GCCGAGTCAGAAGTAAATTATTAGCCTGTATGCTTATGTCCTTAATCATG
TTTCGTCATCGTTATTGTTTGTTCAGAACCGGAACCAAACTTTGTTTCAT
TGAATCTTGGTTTATTCATTTGCATCAAATGTTCAGGCCATCACAGGGCC
CTGGGAACGAGATTCTCCGTAACGAAATCCATATTGCTTGACACATTTGA
CGACGCCAAAGTCAAGGTAGGTGTTTTAGCTTTTTATGGCAgtgattctc
aacaacaaaattgCCTTAACAAAAAGTTCTTAAGatgttttgtaattttg
gaggattttttttttcaagagattTCTTCATGTTTCTAGTAAGCAAGTTT
TAaaacctctataacttgaaCAAGTTTTCGTGTTCCTTCAATTAATAATG
CCttattttaaacatattttaaccttggaacaatagaatttttatcccta
ttgagatttcaatcgaaattttcatcccaactgtaggaaaaagtttaacc
ggggctgtgagacaggggtgtacgaGATGAAAGTATATCATTAGCCCGTT
GCTCCTGCTTCAAGTGCAAGTGTCAAGTGGTAATACCCAATATTCCACAt
atcaaaataattaaaagaccGTCGAAAAGTCCTACATTACAAGGCTATCT
ACGCATATGTCGACTTTATTTTTCGACTTTGCGTTTCGGGAAGCTTGTTT
CTTGAAACCAAGTATTTCGAGGAGATAGCGCTTTTCATACCTTTACTTTT
ACCTCTACATATACGTTGAATATTATATGGTTTTTGATGTAGTTTAACAT
GCCAGACGACTAATTAAGAAAAAGTGGGGTATGATAAAGAAATTATATag
agccacagggttggatagtggcgATCAAATCCCAGTTCCTTCTCTTCTAG
TATGCTTTCTTcaacgttgtggcagaaacgtgtcaaaggtgtggtaactt
tgtctagtagaaacacgtagaaagtatacttcttttctcattgttatttt
agtttcttcgaCTGGTTCCGTGGTTTTCTTTCACTAAACACATTGTTTTA
CTATattttatctgtggtggtgtctaattaacactgcttggcGCCTACtt
acacaaccctatttccatcatataggaggatattttcgtaAGAGGCCGAA
ATtctgtgtaggtcgaaaactgaggaacagattatgtgttttcatgaaat
atttttttgactcatattgagttatttttttccatcttaactcatattga
gttgcTTTCTTCCTTATATtcattttagatcactagttttgcattgatgg
atttctatgtcatcatattttccttttcaactccgacctgattgattttc
tgtgaatgttcattctagatgtTTGTTGTGATTTGtcttgtctttttgtt
ttgtgggtttggTCTTtagtgtttccattttgagtagttgaaggttttat
acttctagactatatatatgaCAAAGCAATTCATTATACCGTAACAATTG
GTAAATGGTATTATCGTATAACAACTATTATTACTGTATTACGCGGATTA
TAAACGACTTCAGTCTATATTTGATATTATGTGAAATTCGACACACACAT
CACATGCATATCATATCTTGTTTACATTACGGAGACATATTTCCAGTTCT
GTCCTGTCTTTGAATTTAAGGGATATTCGACCAATTGATACCGTAGCAGT
GTAAGCAAAATAGACATACATATATAAACTCTTGGATAGAAATGGAACAG
TGTGGGGTTCATTAAGGATAAGTATAAAAGCATCAGTAGATTCAATAATT
GCAAGTCCAATCGCCTCGCGATTTGTATACAATACGCAGTCAGCCACCAA
ACCAATCAAAAATTTCTTACCGAAAGTTTTGAGTGATGGACAGATATTTT
AATCTCTAGAGGAGCAGGATTCAGACTAGAGGAGCAGGCTTCAGAAATGA
CAATGGCGAAATTATTACTATCCATCCACGTATTTGTATACATTTGTTCA
CTAACTGTTATCACAGTATGGCTATTTGGTAAAAAACACTCAACATTCAA
ATTAGAGTTTGGGGATCAATATGGAAATTCTGGGGTATTCGTATCCGGTG
TAGTGAATCATTATGGTCTTTTCCTATCAGGTATTACACTGTTGAATGTA
TGGACTATCATTGGATTTattgttttaattgttttgCTTCAGAAAACCGG
TGCAGATTGCTTTAACAAACCTATCATTTTCCTGGTACAGCAAGCTTCGT
TTTTACAGCTACTTTCTTTTGTTACATTAAATTGGATTTTAAGCGATATA
AATATTAACGATAAATACTATGACTATCAATCAGTTGTTCTTGACTTATT
CTTTAGTTGGAGAGAGACCCTAATACCATTTCTCGGCTTTAATATGGCTC
AATTATTACTAGTCCTCATATTTATAATCACCGATTACTACCTACACTAC
AAAACAGCCAACCAAAACTTACGAGGGGAGCTTTATATTTCTCTTGTCTG
TAAAGGTTTTGTCTTCATCGTAATCAATACTATTGTTGCGTTTTATTACC
CGGAGAACATTATCACATCGTATTATGCTATCATATTGAGCCCAATAACA
TTGGGTGGTCTTGTTATCTACATACTCGCTGTGAAAAGCGCATGGAGGTT
TTCCTGCTGCTGGAGAGATAATGCATTCAACCCGGTATTGGATGATTTTT
CACTCTGGGTTTATTGTGTATTGTCTATAATTCATGGTGCTGGATTGACT
TTTTACATTACCACGTATCTCAATATATTTGATAAAGGTACGGATCTTTG
TTCATCACAAAGAGAATGTATATTACAGGCATGGAAGATCAATAATTCTT
TAGATGATGGAGATTTACTGCTTTCTTTCGTTTTGATTGCTCCCTTGCTT
AATGTTACACTTATACTAGCAATCGAGAGGAAATTCCGACAACAAATTTT
CTTATACTGTGTCTGGACTAGCGATGTTCTGTCTGAATATTGTTGCAGAT
ATCAGGGTCCTGAAAATCCAGAACAAGATCCGCTATTACAGAATGGGGAG
CACAATCCAAGATATATGGCTGAAGGAAATATTGAAGCTAATCAAAATAA
TGATCCACACGAGGATAGACATGAGAGAGGAATTGAACCAGCGAAGCGCC
CTGATCAGCCAGATTTACGGCAGCCGAGGAACATTTTGGTAGACAAGGTT
ATCCCAGTACAAGAAACGAATCAAAACTCACAATTATATTCTGAATGCCA
TAATCAACTAAATCATGATTATGTACAGGGTAAACTCGAACCGACCACTT
CAGAACACCCGCCCCTTACTGAAGAACACCCACCGCCCACTACAGAACAC
CCATCGCTTACTGCAAAACACCCGCCACCCACTACAGAACACCCACCGCC
CACGGCAGAACTTCCACCGTCCACTACAGAACACCCACCACCCACTACAG
AACACCCACCGCACACGGCAGAACTTCCAACGCCCATTACAGAACACCCA
CCGCCCACTACAAAACACCCGCCGCCCACTACAAAACACCCGCCGCCCAG
CAACAGGGAAGAGAATTTTCATGGCTATCACACTGTTTCTACACAAACTG
AAAGCCATGAAGAAAACCAGAGAAACGATACAGGACAAGTTCATTCTGAT
ATTACTGTTCGACTTTATCTTCACATTTAGTTAAAAATGATCATCGACTT
TGATCGTGCATACAAAACCACCAGATCCTGTTATTACTGTTGGTTATGTG
TTGTAATATGTGTACCAATTTATGATAAATTCTTGTTAAAATCTCATCTA
TTATATTCATAATTTGTATGAATTGTCTTAACATTTTGGAAAGAAAGTAA
AGTTGAAATTTCAAGTAGAACCTTTTAGTAAAGAATTTCCCAACAGAACT
CTTTAAAAGCCAAATACAGTGTGTCCGTGAAACTCCTcaagataaaaatt
ttttaaatatgctCCGCTTTTTCTCTTGTCTGTACacacaatttcaaaat
tcattgccgtagagggtctgttgtcattgtcttttctcatttgagatttt
tcaaatcggccgctgcgatggagtgttggcgAGAGAGGGGAGaggatgag
agaagtgttgctatttattaATCATACTTTACCCACGTAtgggaattttt
ttaatcaaacagacaatgtgcacagagtgtactacgaagcgataaacgtg
agtgTATACTCTGGTACAGATTACTTTCTCTCCAGACACACTGTAGATTT
ATATGAGATTTCGACACTCCCTGGCAGCAAAGTGGCTTTTTTACCATTAa
tatctttctcaaaaattctCTCTGGCAAATTTTCCCGATTTTATCAACCC
TGTGAAATCCCCTGCCGTGGCTTATTCTAGTGATTTCTGATCCATAAGAT
GAATACTACTTAAACCGTTTGCACATCAAAATCATCCAAATATCAAAACT
CATTAATAATAcagaaatttctttcattgtaccttatcggccaaaactta
gttggNGATTAATAATACAGGAATTTCTTTCATTGTACGTTATCGACCAA
AACTTAgttggccctaagtgactaaattttgacttggtgactaaaattag
ggccgactaaaaatttagaaatagccaaaacttagttattagtcgaccct
tagtgactaaaattagggccgactaataattataaggccgactaagtttt
ggccgataaggtatcccTTATACACCTAACTTCACAGCCAAATAGGCTTA
CAAAACCCCATCCATCCAAAAAATtatattacattttatttttctagCAA
ATGGAAGCTGGTGGGAATATGTTAGGTGTAGAAAAATGGCAAGTAAACGT
CCCAAAATGTTGGCCAATTGTTGATAAACATTCACCAGAGTAAGTGAGAT
TGTATAAATTCGAATAAAAGTCCCTGATGTTTATTTAGAtctagacggcc
cacttttcgccctgcctattctaattatgAATTGAAGTTGGCAgaaagtt
ggctgtctaaagtttatgcattgccctcttttgacatCAATGCGATGTCT
GCTTTcaacctttttcaagcaaacaTTTAACTGCCAAATTGCTTACttta
acaattagaataggcagggcagaaagtcagTCGTCTAAGCTTGAGCTTAA
TTATTTAGTTTTGAGGAGAGCTGTTTATTCGAGGGCACGTTTAAaggaag
gggcgtttattaaatcattttcaaccaaCGGCAATTTGAAAAGCGACAGG
TACCCCACGagctacttgtttcaaataaacgagGGGCGTTTTAAAGAATA
GTAATACGGTAATTTGTTGTTTAGCTATTTGCTCAatctgaaccaaaaaa
aatgttaataGATAAAATCTTGACAAAACAAACGACTCATAGGGATACAG
ATACACTTCGGTCCTTAAATCATCAACCCTTTTAAGGACGGGGGGGTAAA
TAAAACGATTGAGGAAGACCTGCAATTTGGATCCACAAGATCGAAGACGG
TAAAAATGCGGCTTTAAAGGGATCTTTCGTCATCaagtttttccttaaaa
ttaaTTGTCTCACCTTCAGTGATCTAATTGAGCAATGGATACGAGCGAAA
TACGAGCGACAAGAATTCACCGAAAATCAAGTGACTGAGGAATTAAGACC
TTATTGCGTAGGTAAGGTGGATCATTATTTCAGATCCTAAAATAAGACAT
TGTTCTCAATTGTACGGTAAAACAAGTAACCCTCTATTCCATATACTAAG
TGCGGCTAATGTTAGTTAATTATCGGAGCCTTCTAAATTTGCATTTTTAC
TTATTTTCAATGTTCGAATAACCTATTCGTTTTGATTGAAAACTATTTTA
AGGTGTTaattttttatggattttcaggTTCGAAGTATGGTTTtctgatg
aaaaaaaagaagaaggacAGTAAATGGCAACGCAGATTTTTCGTCTTATC
CGCGGAGGAAGGATATCTCAAAATGTACATCAAACAAGGGGTGAGAAAGT
CTTTACTGATATAATATTTATCCCAAATCGGGATGAAAAGATCAGTCGGT
GCGCCAAAttgggcagattctcttacgaTAAGCCATGGTCTACAGTGTGC
CATGTGTGGAGGCATTTATAGTATGCATATACTGAAATAGGGATAGTATG
TTAAAGGACATTTTGGACTCAAAATTACCAAAACCAGCCTCTAACTCTTA
TATAAAATACATTACACATTATATCGGGAATAAagaactacacgtttttt
tttatataaggaacacgtttataaggaactcgaggctcaaaatggttcaa
aaaataaggaattgtttaggaactgctcatgctgagaataagaaaacaag
ttttaaggaacagtaagagatggttatccaaacttagcagctatgtaaat
aaggaactcgataaggaactttgaggctgaaattctctgtaaaaataaaa
aactccaggctcagagcaaagttaaggttccttataaaaaaaaaaacgtg
taacttaCAGCTGCTACACGCGGTGCTTTCAATATTTGCtcgaatttttc
gaattttcttgaaCACTTTGTGATTCTACTTATTTGACTGTATTATACAT
CCCATTCATTTATTTTCCTCTTCATAGGACAATGAACCTAAACACAAGAT
TAGCATCAGTGGAATTAATTTAATGATGGTTCATAGTGACGTCACCGGAG
AAAAACATAGCATGCTAATCACTTTTCCCATCATGCAAAACAACCAATCG
AAACAAAGGCATATTTATGTATATGCGGACAAAAGTTTTGTAAGTTAGGA
CCCAGATCCTTTACTTTGCTTCGTTTGACTGTTTCAATCAGCAAACATTT
TTACATAGGGTTACCATATAGTGGGTATCAAGCCCCCCTTAAAATGGCAC
CCCCCTCTATTTTCCAGGTTTCAGTTTAACCCCCTCTTTTTTCGACCTTT
TACTCACAAACTCTTACAATTTCTAactataaaaataataattgttgaga
aatttaaaaatgaatggaaaacaAAGACACTCTTTTGTAAATTGGCAAAT
CTTCCtagccccccccctaaaaaattaacccccctctttttttgtccaag
ccaccccttttatttggaatttttacaagatcatgttcagacgttacaga
tgaaaatagtggagcgaagtcttttcgatctgttttgctttgtagcGTCT
TCTATTTTGACGTTTCCActtttgacgttcacacagtGTTTCGGAACTGT
TTAGTTTTGGAGCAAAACGGAACGTAGCGGCTGAACGTGGTGTttgacca
ctcggccatcgctcCTAATAATAACACTGTTGAGGATATGACTCACTGCG
ATGTAACAGAATTTAGACTTGCTCTCAATGAGAAAATAATAAAAGTAGAA
CATTGGGTCCCAATGACACCATGCTTCTCAAAACTTAACTTATTTACATT
GGAcatgatcaaaagttattcagCCAGCAGTAGACTCCAAAATTCCTTAA
TTAACTTTAAACAGGGTACCCAAAGAAATcctaaatttaaaattattatt
ttgaagatttttaggGTTCAGTCCCTTGTAAATAGCGCAACAACTTCACG
GTGATCTTTAATCGGATTTAGCGGATTAGAAAAATGCTTAAATTTGGTCG
TAAAGAAAGGGAGGGTATTTGATAGGGAAGTAAAAATTAGTTGTGCTCAA
ATTGTACACATATGCGCTTTATTTATTAAAAGGATAGGGTCGTTTTGAAA
AGTTACtttgaaattattacaaaaattaaactttaaatttcccagatttt
caaaaattattctgAAGATCGCGGTGCTTCCGCAACTCAAAAAtagttaa
aggtttttttttaataagagtgatatcctTTGCTTACTCCCATCAAATTT
AATTCAcaagatttttggacctacctggaggtcctataaattaacctttg
ttcgtccgtccgtccgtccgtccgtctgttaccagcttttctcgagattg
gttcattagttttttctgatttttggcacaaagatgcaaaatggcaatgc
ccaaaatgtgacggagcccgattttcgaaaaaaaaaattttccggccgaa
aatgccggaaatatgccggaaaaaccggtttttttgacattttctcgaga
tttcatcattagttttttctgattttttgcttaaagatgcgtattaacaa
tgcccaaaacatggtcaagtccgaaaatgccggaaatatgccggaaatca
ccgtttttctggattttcattagactttttccatataattggttgttttt
tcattcaaaaacattattaatagcaatgcccaccatcaagcgtgtttcaa
ttttcaataaaattgatttttaaagccGGAACTATTAAAAAATCACCGGA
ataacctattttcgccggaaagacagtatttcttgaatttctcgagctgt
actttatatttttttatgaaattttgcacactgatgcaaaatgacaatac
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgacggagcccga
ttttcgaaaaacatttttttccggccgaaaatgccagaaatatgccggaa
aaaccggttttttttacattttctcgaattttcatccttagttttttctg
atctttttgCAGAAatatgcgtattcgcaatgctcaaaacatgacagagt
tcgattttttgagaaaattttttttacagccgaaaatgccggaaatatgc
cggaaatcgccgtttttgcagatttttattgggctttttcctaacatttc
tttgttttttctcaaaaaaaaaacatcattgatagcaattcccaccatca
atcatgattcgattgtcaataaaactgattttttttttctcaaagtagaa
aatgtcacggtagaggcgatggtttgagttttctagaaaccttatttatt
aagctgtgtaTTTTCTGAaagtggattgtttttataaagaaaagcgttta
taATAATTTCTTTTAGCTTTTTCAATAATAGGGCTGATAATTTCTCCCAA
TAGACATGctttcattatatattttttattttgtccagttatgtcttatg
tgtttcattgtttcaatgttcattgattagttttgataaccaggtaggtc
cataaaagtatcacttgttcacattggattgacagggatgtggagcaaga
ttcgTCAGAAaggggaaaagaaaaatattttttgcttatagcagacactg
tcctgatataagatatgtgtctgatatgaaacgggaacataCTTATGtaa
gataaaacctttaaaatagtATATATCATTTTGATGTTTCTTTCAGGAGA
TAGTTGACTGGTATCTAACAATTCGTGGAGCACGCCTGAAATTCTTAACA
CCCTATTTATACGAAGTTGAACGTCCAGTGGTATGTGATCATTTCTGGAC
TAAGGTCGTCTTTTAATATGGGCGTGGACTGATCTGGCTATTAGCTATTC
GtgatatttatgacgtcatgTTATTTACGGAAGCACCCATAAAAGACCGg
gtgtttgccactaattttgacTTTAACAATTAAACTAGTGGCAAACGTAC
GGATTATTTTGAGTGCTTTCATATAAAATATTACGTCACGAATAACATGA
ATTGGCTACATGGCACGTCACtttgtttgacgtcaaaaagtttttcagcC
AATCTCCATCTATTAAagcatggaattattatagacactggaaaaacaat
gagctgatttttgccaatttctcatgtacaagccttgtccgcagtaatga
cattattgttcaccctccttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCTGAGATTCAAAC
TCGtctagttaattactaattatacgtcgttctgacgttttaaatttcga
gaaagatggaaaaacatgttatgtataagaaattgaatgttaacaccaga
aatttttaaacttcaacctcaaaaaatccaccATGCCACCaccgtgccac
caaaagattttcagaccacagtggagctatgagactcacatctaatatat
gtcaatctcagctcttctagGAGatatattggaaagatattcccaattca
aaattcgtgtcattataagcattttgtttgattttactcatctgatgatt
tttttctcacatcagatttcataaatgtatccgtttggtattctagcatt
tattttcaaacttttggccagcaaaagtacgaatagaaaaagttaaaaaa
ctttttagaaattagagtattaatcatttttcaaaatcagagtccttcgc
gccgccatgacagttgtcctttgcggataaagctagaacatcaattgttt
tctgaaacaatagaaagacaatacttctctctccaccgtttcatttgatg
tttatccagagtctctataacaAATCCATGATTAAAGCTACTATTTCCAA
ACAGACTTATTTAGCCAGGCCAGATAGGccagaaagaaaaacatttttta
atacCTACGTTACCAACGTTTGTTCTTATTCAGCAAATTCTAGTGCCGTG
GGAAGCATTTTAATATGGAGGGCTGAGGTATAGTGACACCGCAAAAGCTA
ACTGTTGAggggattttgaaaatttaagttCCAGACGTCCGGAAAATGta
cttaaaatgaaaatttatttcgagAAAGCTTTTCTCAAGAAAAGTTATTc
gtggaaaaataaaaaaaagtggtTTGAGTCGACGTTCCCTTTATAATGCT
ACTTGCAGTCTAAAGTTTATGCTCTCTTTTTAACCAAGCATACAGATGAT
GatcatagttttttttaatttttctaggtTGACTTTTTGCAATCAAGGAA
ATTTATCAAATCAGGATATCTACACAAAACTGGAGGCANt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038134XLOC_038134Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060635-exon-scaffold_348-1491911889:150751..150944TCONS_00060635-exon-scaffold_348-1491911889:150751..150944Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:150751..150944TCONS_00060635-exon-scaffold_348-1510915933:150751..150944Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:150751..150944TCONS_00060635-exon-scaffold_348-1575043694:150751..150944Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:155230..155332TCONS_00060635-exon-scaffold_348-1491911889:155230..155332Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:155230..155332TCONS_00060635-exon-scaffold_348-1510915933:155230..155332Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:155230..155332TCONS_00060635-exon-scaffold_348-1575043694:155230..155332Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:155877..156016TCONS_00060635-exon-scaffold_348-1491911889:155877..156016Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:155877..156016TCONS_00060635-exon-scaffold_348-1510915933:155877..156016Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:155877..156016TCONS_00060635-exon-scaffold_348-1575043694:155877..156016Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:160598..160689TCONS_00060635-exon-scaffold_348-1491911889:160598..160689Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:160598..160689TCONS_00060635-exon-scaffold_348-1510915933:160598..160689Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:160598..160689TCONS_00060635-exon-scaffold_348-1575043694:160598..160689Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:161370..161461TCONS_00060635-exon-scaffold_348-1491911889:161370..161461Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:161370..161461TCONS_00060635-exon-scaffold_348-1510915933:161370..161461Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:161370..161461TCONS_00060635-exon-scaffold_348-1575043694:161370..161461Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:161678..161790TCONS_00060635-exon-scaffold_348-1491911889:161678..161790Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:161678..161790TCONS_00060635-exon-scaffold_348-1510915933:161678..161790Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:161678..161790TCONS_00060635-exon-scaffold_348-1575043694:161678..161790Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:162428..162589TCONS_00060635-exon-scaffold_348-1491911889:162428..162589Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:162428..162589TCONS_00060635-exon-scaffold_348-1510915933:162428..162589Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:162428..162589TCONS_00060635-exon-scaffold_348-1575043694:162428..162589Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:165147..165230TCONS_00060635-exon-scaffold_348-1491911889:165147..165230Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:165147..165230TCONS_00060635-exon-scaffold_348-1510915933:165147..165230Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:165147..165230TCONS_00060635-exon-scaffold_348-1575043694:165147..165230Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1491911889:166828..166890TCONS_00060635-exon-scaffold_348-1491911889:166828..166890Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1510915933:166828..166890TCONS_00060635-exon-scaffold_348-1510915933:166828..166890Clytia hemisphaericaexon
TCONS_00060635-exon-scaffold_348-1575043694:166828..166890TCONS_00060635-exon-scaffold_348-1575043694:166828..166890Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:150751..166890 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0788412	0.012843	0.0107762	28.9988	25.9754	12.804	17.6017	1.48873	0	1.02553	3.30081	8.79481	2.0939	3.96207	6.38563	0.00018791	0.964005	0.108421	0.196936	0	0	0	0	2.76471	4.93422	0	0	0	0
Blast
[Close]
BLAST of TCONS_00060635 vs. Swiss-Prot (Human)
Match: ADAP2 (Arf-GAP with dual PH domain-containing protein 2 OS=Homo sapiens GN=ADAP2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.397e-46
Identity = 106/275 (38.55%), Postives = 154/275 (56.00%), Query Frame = 3 
Query:  222 EQCAHRLQELMRIP--GNSQCADCGTEEPEPNFVSLNLGLFICIKCSGHHRALGTRFSVTKSILLDTFDDAKVKQMEAGGNMLGVEKWQVNVPKCWPIVDKHSPDDLIEQWIRAKYERQEFTENQVTEELRPYCVGSKYGFLMXXXXXDSKWQRRFFVLSAEEGYLKMYIKQGDNEPKHKISISGINLMMVHSDVTGEKHSMLITFPIMQNNQSKQRHIYVYADKSFEIVDWYLTIRGARLKFLTPYLYEV-ERPVVDFLQSRKFIKSGYLHKTG 1037
            E+   RL EL+R P  GN+ CADCG  +P+  + S  LG+FIC+ C G HR      S  KS+ LD +DD+ V+ M   GN+    K++  VP  + I   +    L EQWIRAKYER+EF  +  T  L     G++ GFL K+ + +S++ RR FVL A EG LK + K+    PK  ISI  +N     ++  G  H + IT+          R+++VY +   EIVDW+  +R ARL++L     E+ E  +V FL +R ++K G++ KTG
Sbjct:    5 ERNKKRLLELLRAPDTGNAHCADCGAADPD--WASYKLGIFICLNCCGVHRNFPD-ISRVKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERREFMADGETISL----PGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISIKDLN-ATFQTEKIGHPHGLQITY----RRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMAFPELPESELVPFL-TRNYLKQGFMEKTG 266
The following BLAST results are available for this feature:
BLAST of TCONS_00060635 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADAP23.397e-4638.55Arf-GAP with dual PH domain-containing protein 2 O... [more]
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