TCONS_00060643 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060643
Unique NameTCONS_00060643
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1484

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060643 ID=TCONS_00060643|Name=TCONS_00060643|organism=Clytia hemisphaerica|type=transcript|length=1484bp
GCGGAAGCTGGAAGAAGACTGTCAGCCGCAgcctgacagcaaaacttttt
acaaagtCTGTTACACTAGAGTTTCCCTCTCTCTGTCTAGTTTTGTACAT
GGCTGATGTCAATTGGATCTGATCAATGAGCAATAAACCAAAAAGACAAA
GATGGTACCTGGGTGGACCAGCTGGTGCTGGAGCGGTCATGTTCACTCAT
CCATTGGATCTGCTCAAGGTTCACCTACAGCAAGCAAAAACAACCAATAG
AGGATTAATCTCAACTGCTTTGAAAGTCATCAAGAATGATGGTTTCTTAG
GGTTGTATGGTGGTATCAGTGCTTCCATATTACGACAGCTCACTTACAAC
ACAACACGTTTTGCCTTATATGAAAGACTCAGTGCAAAACTACTGGAAAA
TCGTAATGATGCCTTACCGTTTTATCAGAAGCTTGCTATTGGTTGTGTAA
GTGGGTTTGTCGCTGGTGTTGTTGGCAATCCTGCAGACATGGTTCTGACC
AGAATGCAAAACGATGTCAGACTGCCCAAAGATATGCGAAGAAAcTACAA
ACATGGGTTTGATGGTATTTATCGTGTGGTAGTTGAAGAAAGATTCCACA
CGTTATTTGCTGGTGTAACGATGACGGCAACGAGAGGTCTTTTCATGACT
CTTGGACAGGTGGCAACTTATGACCAAACAAAACAGATACTCATTATGAC
AGGATACTTCAAAGATAATGTCCCTACGCACGTACTTGGTAGCTTTTTTG
CAGGAACGATAGCGACAAGTATCACACAGCCgtttgacgtcatcaaaaca
cgGATGATGAATGCTAAACCTGGTGAATATCAGGGTATTTATCATTGTGC
GAAAGACATATCAAAAGATGGTATCTTCAAAGGATTGTACCGAGGTTTTG
TACCACGCTGGATCCGCCTTGGTCCGCACACCATCCTAACATGGGTATTT
CTTGAACAATTACGTAAGGCGTTTCCTTTGAAAAACGATTAATACTAAGG
GGTGATACCGTGTGTATAAAGGTCTATGTAAACTGTACAACATATTACCA
GGCTATAAATTTACCGAGTATCGGCATGAAACCATAGCCTTTACAAGGAA
TTTTTGCTGTGCGCGGAGCAGTTAGGATCTGTTTGGATATTAGCCATGTT
TATTCTGCTTTTGTGCCCACGTAACGTTACATGAATGTCAAAACGTCTTT
ATCGCGGGTCGGGATCTATCTacaattaaggtcataatatttgagaaaaa
atgaaaattccccaggaagttttgaaaccacaatcgatttataagtgctc
taaagtataggttcgaagggtagagttttaacgctagacttaggacttac
gaccttaggatctgacgatctaaaagttcaaaaatagtccaataagactc
agaatatagcctggaagtctgccaacccatcccaaatcgaaatattcgat
taagttaaagagatagcccaaaatcgactttctc
Run BLAST on NCBI

transcript from alignment at scaffold_348:404358..421900+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060643 ID=TCONS_00060643|Name=TCONS_00060643|organism=Clytia hemisphaerica|type=transcript|length=17543bp|location=Sequence derived from alignment at scaffold_348:404358..421900+ (Clytia hemisphaerica)
GCGGAAGCTGGAAGAAGACTGTCAGCCGCAgcctgacagcaaaacttttt
acaaagtCTGTTACACTAGAGTTTCCCTCTCTCTGTCTAGTTTTGTACAT
GGCTGATGTCAATTGGTAAGATTATTTTCGTGATGAACCCGGAACCCCCT
TTCAGCCTTTACTTTGTatgacgataattaagcctacaaacACCGAGaaa
caagccgtatatgtacaagccgtatatgtataaaagttgcgaagcgatcc
agagccacctcgattcgcaagttgcaagcaaaacataTAGTTCCAAATAA
TAggaatatttcatattttcaaaaaaaacggaatttataactgaaaatgt
ttaaaaggaaaaaaactttcaaaacaagaagcAATTTCATATTNCGGAAT
aactgaaaatgtttaaaaggaaaaaaactttcaaaacaagaagcAATTTC
ATATTATACTTAAGTTCAACAGATTAAAAGGATGGAAAAATGTcttgtat
atttggaaaaaaagttttttatctgaAAGAATGCCCTAAGGGAAAAAAAC
TCCACTCTCAGAAGCCATTTTCCATTCCAAAAGCATTCTGAAAAGTTATA
TAACATTTTATAAGGCCACAATCACAAATAACTAGTTCGCGCTGTCCAAC
TGActgataatatttttcttaattttctgaaCACTGCAATACAGTAgcta
tttatttaaaattttcgtTGGATTTGATTTCTGCCCAACACATagtttga
aaatccaatttttctgaCGTTTCAGCTGCCGACCAAACAATCAATTAATT
TCTTAACCTAAAAACGACGCAAACCAGCGCAAAAACCAGTTATTAGTGAT
GGTGACctattttcagaaaatatatatacctttaatttggcggatggccg
aaaaagttttttagatggaatttaatttggcggatggacgaaaaaactaa
atttggcgggaatttaatttggcgtttgctgaaaattttatccttaaaat
ggcgtaaaaacagcaaaaaaaaatgcaaaaacaccttaaaagagatcata
ttttcaaaaagtttaatttggtgggaatttaatttggcggatggcggaaa
aaagaaattttggcgggaacttaatttggcggattctggccaaatccgcc
aaatccgccaaattttctttccgccaaaatttcttcctttaaggtatcaa
aaaggtaaaaaaaaaatttcatactgTAACAGGAAttatttccttatttt
caattagtacgtaaaaaaattgcaattgtaatcaacaaaagtttttcaca
ttttaaacgtggaagaCAATATTATATACTGTAGTTGACGACAAAGGTTT
TCCATGTTTTAGATgcatatcaaaaaaaaaattataagctcaggcgaaaa
tttaaaaagtgtagTTTTACCGGAAACCGGTCCagtgagaaaactttttt
tctgacccggtcgcaaaaatatatacttaaATGCGATAAACTTTTGtgga
gattaaattttgcggatttcacGGATTTGCGTGTTATCCccaaaaatctg
cataattaaaTCCCATTGAAAATTTGAGTAGGCCTTAtcagcaaaatatt
tctaaacaaaactcaaaaaatgttaaataaatactttttgaatgtttaat
GGCATNCATTAGTACTTGATACATAGAgattacttcatactgtttgtgta
cataaaagttatctttaaagttctatttcaatgatcttaagttatcaaaa
atagtaaaacaaattttttccagCAAGCTGCATGTTctcatgacaaaagt
tttccaaattttgaacacatgcaatgaaaagttcatggttcgctacaaaa
gttttccatatttTAAACCCATTCCGAAGCGAAGATAATTTCATATTTCA
CGACACATTTTCCACATTATAATCAAAACGGAAGATAATTTCGAAGTTCA
ATGAAAGGTGATAATTCCAATTGTTTACATCCAGCTTACTTTTTCAGAGG
TTGACATAACATTATTATTCATCAGGCCGCCTGGGCTGGCGGCTGTGGTT
GTCAGCTTCAAAAGTTGGAAATAAGCCGCTACTGTATATAATTTCCCCCT
CAAAGAGGTTTCAATTACCAGTTGAGTGTCATTGTTGTAGAAGAAGCACC
AAGTAAAATTCAATCTATATAGTAAGGCAAGGAATTTCTCCAGACTTTTT
TAAAGCTGCAAGTGTTTCATTTTCAGGCACAACATGGTCAGATTTCTCCA
AAAATATTCAGTCACTAGCCCTGTTACAATTCATTTTAACATGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTATCATCCACCATTTCTTGTGCCAATCAGACAAAAAA
CATGATCCAATTCGACTCTTGAAGcatgaaaatcgaagaaaaataaCCGA
GGAGCAGTATTTGTTGTCAATTTGTTGCCGCCATCTTAATGTTTTGACGG
CTAGAAACCAGTATGGTCTAATCATCAATACccttccgaaccgggcgacg
ttccCCGATCTGCAAGGAGAATAAAGCACCGCACTGATGTTTTCCCGCGA
CGTGTCTTCAAAAATAACGTTGTCCGTCTCAAAAAAAGGCACTCTACTGT
TCTCTCGCTCGGAGCTCGATTGAATATGAGCCATGTAGTCATACACGGAA
TTTCAAATTCGAATACGTCAAATTTAATGTAATGGAGATAATTTTCTCTA
TCATTTCCGGGAATATCCTTCATATTTTATCCCCTTAATATTCATTGTCG
CGCGACTCGGAGATACTAAACGTTTTTCCCATCTCCTGCCTTATAGATGG
TTGAAAGAATGgaaagttaaaggtacgcacacacgatagcaaaactgctt
cgctcatgtacattcgcttcgcaaaaacccaacatagaacaggtgtattt
tgtaatgcaGAATATGATagtgtgaatctttttgaatttctatgttagga
ttttttctcaatgccctgTAACTATGCTcattgctaagaccttatgttaa
aaacgaaagcgattacggcaaaaattcatcaaaaatattgatttttcgta
atagctcaaatattgatacttgtgATACGTCTTGTtatttcgacatagct
gtaggctggaaTACGCGATTGATATCGACAATCAGTCCGTCACAAACAGC
GACATTTCGATATCACAcagaagcgcttcaaaacaccagcttttttggag
ttttgtctcgtttacccaaacgcttcaatctcgcgtaggcttaggagtca
agactagaacccccaatacgagacatttgcctgaccgaaaaaaaatcatc
atcatcaattttgttaattgtcagaatcgtttactcactggaaacgcaac
tttttgaagtttcattttttttcgctTACAgtgcttcatttaaaaaaaac
gaagatgaaaagttaccatcaatcccgcgagtaaaagaaagtattccgac
tagtctacgaaaaatGTATATacaatataataaaactattatatATATTG
ACAATATTGACTCTTAGCCTAGACTAAAACTCccatatcaggattagaaa
ctaggctagtcttacctctacCTTTTCCTTTGCAGCAACAAGctgtatat
gtataaaagttgtgAAGCGTTCCAGAGCCTCCTCACCTTTAATGACATGC
AAACGCCATATATTTTATAACGACAAACGAGCTGTTTGACTTTTACGTTC
ACTGTagtctttaaagatttttcaaaaacccTCCCATTTGCAACATTTTT
ATAGTCcttctcttttaaaaaaaatatctgtAGACATCCCTATGTTGCTG
TCATGGCATTGGCCTATTACAGGCGATGTCAACCGAACGTTATGGAACCA
ATTTTCGTAATGGATCAATCGAAtttcatcgaactaatcgaacaataaat
gttcgattaccgaaccaaatcgaacagtaatcgaactttaccgGAAATAA
CTGTTTGATTATAGTTCAGTCACaaaaatccttgcatttgcacaggGTTC
GACATGCGGCAAATGCAACGGGTCGAAAACCAAAGTGATGAAAAAACCCC
GTGCAAATACACTCAATCACTTCAACTTGTTGCATTTACACAgagtggaa
aaatgtttcacttgattataaaaaaatgcatagatcaaaattttaacccg
tagacataaattttctaaaaaggctAATAAAGAATCTTCTAAAGAAATAA
TGAAATGCCATTCGTCTTCGTTTTAtgccattttcattttaaagttgaGA
TTTGTGAATTTTCACGCATTTTGCCTTACATgttctagctcatttgcaca
gggttgggcgaacccgaaaaaaatttttgtttccggtccaccggccgggt
gaaaatttatttcgtcgtcatccggccgcatttttttttcgtacatcatc
gttagggttagggttagtttgtttgtttggaaaacttttgtgaatcagtt
tttgaggcgtgtgatttatcgcatgtgatattttatattctactgtaaaa
tgcacgcctagaaatcacttggaatgaaggttttatcctgatcattgtta
tagaaatgaaattttattcatctcaaactaaaccctgcattgtttttgtt
aattcttgcttgcaactcaacttttaagaatttttttatttttatataca
acttggtttttataaaagaatcatgttgatttgtgagtaaaataaataga
aacattcacaaagtggggacttttcagtaagtaaacagctttgtttttat
aaaaggaatcaTGCTGACTTGTGAGTAAAATANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacttgtgagta
aaataaaaagaaacattcataaagtgaggatttaaaaaattggggaaatg
tttctctcactctacttttttctcaaaaaagttcacttcGTGATCACAGT
TTGGAGCCTTTAGcaattgaagataaatattcaaaatgaaagagagtgtc
cagttctttgagatattgtaacacaattgaatatataaacgatgaaaatt
aagtatttgaatGATCGCATGCCTAGAccactataaatcaaaatctaggc
gtgcgatgatcacacgtgaatttttcttatgccgaagcctgtagcggtgt
caagttactacagatttaagataaagaagaccatcattttaacttctacg
agtgctttaaaaaatcgagttttgggatcgaaatttagcaaaaaaaattt
gtttgcggccggccgggtgagtgtttttttcgtcacccggtggaccggaa
acaaaaatatttttagggttcgcCTTGGAAAAAATCGTTGAAACCATTGC
AAATGCACACCtcgtgcaaatgcaaggatttccgtGACTGATAGTTCGAT
AACAAAACAATATATTGCTCAATTTAAGTattgcattttgaagttttttt
ttgggaATCCAGTGACATCATAGGATCCATTTACCCCTAGACAAGAGTCT
GTCTTCTGATAGAAAATGACtgttcaataatttgaaatgtatattgtcaa
ttaaaaaaaaaagaaatatgtaattttattatCAGAAAAATTAATTAACT
TTCTTTGTCCTACTTTTAACTATTGTATTAATTTTATAATAGGATCTGAT
CAATGAGCAATAAACCAAAAAGACAAAGATGGTACCTGGGTGGACCAGCT
GGTGCTGGAGCGGTCATGTTCACTCATCCATTGGATCTGCTCAAGGTAGA
ATACAATACCATGTAATTATTTGTCTACTTTAAACAGATTCGAATCACAT
AATAAGTCACATTAGGCTTTGATGTTTTAGGACACATGAGCAATTTTGGT
CGATTCTTCAGAGTAAATTTTGGGTGTTGNGTTCACTCATCCATTGGATC
TGCTCAAGGTAGAATACAATACCATGTAATTATTTGTCTACTTTAAACAG
ATTCGAATCACATAATAAGTCACATTAGGCTTTGATGTGTAAATTTTGGG
TGTTTAACCTTTTAATAAACCAAAGTTGAAACAGGgatgttattttttta
atagataTAATAGATATTTCTCCCAATTCACTGTCTCTGTTCAGTCAGTA
AACCAAAATTCACTTCCAACTATACCAAGTGGCAATTAAGTCCTCGAGTT
Ccacatggacccgtagctcaatggtagagcaaatgcccacaaatggcatg
gttgtgagttcaaGTCTTGCTGGATCCGTTAGTTTTCGAATGGCTCtcgg
tggctggtcagaagacaacatgagagctactgtattcacttcattacTAT
ATGATTATTTTAGGTTCACCTACAGCAAGCAAAAACAACCAATAGAGGAT
TAATCTCAACTGCTTTGAAAGTCATCAAGAATGATGGTTTCTTAGGGTTG
TATGGTGGTATCAGTGCTTCCATATTACGACAGGTTTCATCATTACATCT
TCTTTCCTTCAGTGTACAAGGTCTATGTAATCATGCAATTTAAAGTCTCA
GGGGCACTTGAAACGATTAAATTTGACTTTTGATATTCTATGATATTCTT
ATAGTATTCAGACATTTTAGAAGATAGACATTTTGATAATATCAAAGCTC
ATACTTCAGGTGTAGAACAATAAACTCAATATAAATTCACTCCCGATCTG
TATAATATCACtgtctcactaacattctgctGACTTGTTATTGTGAAGGT
TccgatcacagacttgcaccgtGTTCAAATCCCAAGTACTTTCCTAACAG
GGTATTAGGGAAGATAGACTCTTAACCTACACTCATCCCattcaaacatt
tttgtaattGTTTGTCTTCTTCTTTGCTTAGCTCACTTACAACACAACAC
GTTTTGCCTTATATGAAAGACTCAGTGCAAAACTACTGGAAAATCGTAAT
GGTAAGTTTTTATGAAGTATCTTTAGTAATGAGTTAAGTCAGACTTGACT
GAGTACAAAGCTCAAGGGTCAAGAACGGTTTAGAAAGTGAGGATCTTTAT
TTGGAAGTGATAATTTTAGGGATGTCATTTTGGATAAGCAATTTTTTATA
TATCTTATTTTGTCAGGATtatataatttgctgtatcttGACTTCTTTGG
AAGAAATCAATGTCCAAATCAATGTCCATTTTTCATATTGAAGACATTTT
TAATGTGGTATTTTGTTGGTAGTAATTCAAAACACCTCTCTATTCCCTCC
TCCCCTTCATCGACCCAAAGACCACACCTTCTGCACTATGTAATAATCTA
TATACCACTTAAAAAATTTTACGTAAAGAATTGTAAGATCTATATCCAAT
ATGTTGTTATCACGAGATTTACTTTAAATTGCataatatttcttaaaatt
gtTCCTTTAGATGCCTTACCGTTTTATCAGAAGCTTGCTATTGGTTGTGT
AAGTGGTGAGTTTTATATATATTTCTTTTCcgattcgaaaaaaaaaaatt
ctaaattggAGAGagacattttttttacaaaataatacaAATTAAAGCAA
ACCCTCTttcaattaaagtttttcatgtttCTAGGCCAGTTGTATAGAGA
TAATCGTTCAAAGCTATATAAGACTGTGGATATATGTAGCTCTTTGTTTA
TGATTATTGACAAGTTGACAAAGATGGTGTCTCCAATCATTGCAAAGTAG
AGAGTCGGTGTCTCCTTTAACAGTATCAAAACAATacaatctttttttat
aagcataacctttatacacgttttttttataagaacatctaaaatttttg
aagcctttggatgttcttaactttttgagttttaagcctaaaaatgtcct
taaacatgttcttatttttctcattttatgaatatttttgtccattttat
caagaatttcggtgtttttgagtcctcaaagccttaacttgttctttaca
TTAAGCTTAGGTCGAAAAATTCatcattcaaattttgttttaaaaatggg
ATCAATTATTAAAGAATTAAACAGTTTTTAAACTGTACACCTTCTTACAA
GGTGGATGAAAtcattaaactttttaaatgatGGTCCATTTTCTGGTTTT
TAGGGTTTGTCGCTGGTGTTGTTGGCAATCCTGCAGACATGGTTCTGACC
AGGTAAATTATGAAATCATAAACCATCGTTAAATTATACGTCAATTACTT
TTGTGGTCCAtttattgaaaaatcaaagaaattcaattaaaaaactCGAG
TAAAATTTCGCATTATAATGCAATAACTtcctaatttttaaaaatcttcc
aaACTGTTTAGGTTTTGTTAGCTGGCAAAATCAACATCCTTTAAAAATAC
TGCTAGTATTTTAGCAAGTAGTGATCGGTTTGAATTCAAGAATTTAGAAT
TGAATACTGAGCCATTTCTACCCTTTTGGTTTTTGACATGACATGTTTTA
AGTCCACCCTAGGAAAATAAGGTACCTTCTGAATTTTAGGCACCCCAAAT
AAACAGCAACTAGTAGGGGTtattataatacatttttttgctcagaattt
acatgctctttcagatggtatcaataattttcgtttattttgactttaaa
aaatcagccattttcctACCCCTTATTTccccttgcaattttgcctatAG
CGTCACTATTTtagtcataaaaagttttcccgggcctaatccgcgtcctc
cctctcaaaaatatcttttagtatactgttctttggaatagactaaaaat
ggttgGGTCGTAgaaagatgtcacgggacccCAGGCTTGGTCCTCTacta
aacacaaaaaaaatctttaaacagcGCATGTAAAAAGATCTTCCCATGTC
AAGTGATTTTAAGTACTATTAGATTTTGCGTCTATAAATCGGGTGACTCA
AAGTCATGAAAGAAATATCGTTCAGCTTGTGCAATGACTTCAATAAGTTA
TTCAAAATCGCCTTTTCGAGGACTCCACTTTCTTCGCCAAGACTGTATGA
TGAAATTGAACGCTTTATGCGacataacccagctggcacacaacgttgtt
tcagcgTTGacctaacgttaaatggaccttgtgaacgttagataaacgtt
gaaacaacgttgtttgccaGCTGGCAAAGTATAGATCTACAATGATACAT
GATTAAGAAATggtgtatttcttctcaatactttaagtttcttccttacg
cattcatcagttgattagaaatcTACAATGATCTACAATGATCTACAAGG
ATCTACAATGATCTATAAGGATCTACAATGATCTACAAGGATCTATAATG
ATCTACAATGATACATACAATGATCTACAAGGATCTACAATGATTTACAA
GGATATATACAATGATCTACAAGGATATACAATGATCTATAAGGACCTAC
AATGATCTACAATGATCTACAATGATCTACAAGGATATACAATGATCTAT
AAGGATCTACAATGATCTACAAGGATCTATAATGATCTACAATGATACAA
ACAATGATCTACAAGGATCTACAATGATCTACAAGGATCTACAAGGATCT
ACAAGGATCTACAAGGATCTACAAGGATCTACAATGATCTACAATGATAC
ATGTCAAGGTTTATGAAGACTTTGATTCTTCCATTTAGAATGCAAAACGA
TGTCAGACTGCCCAAAGATATGCGAAGAAAGTAAGTTACCAATATTCACC
CCTCAAAGTTTACAGGGTATCTGGGGTTCAGAGTAGAGCACTGAAGATAA
TATTCTATTCAGGATATGCACCCCTGTGACATTTGCTGACATAACGTAAC
TTTTACAATAGCTGGTTGCTTGATTAAAAacataatgggctcttccagaa
aatgttcgtacgttcgtgccttgtccgggggggggggtaaacttgctatG
TTTGGGATTAATTTTGCTCtatttgagggtaattttgagtgtcctggggg
tcaactaatgcttgtccgggggttagacctgctgtccgagGGGTCAAAAG
TCACGATATCCGGGGGTAgatttatttctaaaaaatgttatatcctccac
ccccccatattcaaaattttctggaaaagcccaatttcatgaagtcattg
cagtggtacATATCATGGATAAACTTGTCTATCCTTGTCGGCGCGGTCGG
ACTTGTGACGAAAATACAAGGGAAATTATCCTTGACGAATGTATCAAAAA
CACAAGTGTTGGAGTGCTCTTGTGAAACATATACATAAGATGCCCTTTCA
TTGAAGTGATAAAGTAATGTCAATAAAGTTAAGATTAATTCGAATGCTAA
AAATAGTTTGCACTCGACTGTAGAGACTGCAGAGACTCTCTAAAATGTTT
CTAGAGTTTTTGCGGGAATATCCTTAGAATTGAAAAAATGCCGTGCGCCG
AGAATAAATcttccttgtaaattcattaccagtcTCCTAAAAAGCCGACC
GCGCTTCTAAGGGTTGGTGGGTGTATTTGATTCTGCATAACAATATTTCT
TCTGACTTAGGCTTCAATTATTTCTCAGATACCCTTGTTATTGCACTCAA
CTATGCACAGCATGCTTATCAGGACCATCACATACACTCACAATGCACTT
CACAAAAGTATAACACTTATCTATGAACTCTCACTCTAAAATATTACATA
GATAGATAGAaacgatattttacgtggataacccagtaatctaggacttt
taggcagtctttcgattgttttcacggggtccacggccagcctgCTCGGT
TTtctatgaactgaacagaacattgggaggagcggggattcgaaccgcga
acCCCTGGTTTAGGACGCTAACGCCTTTGGCCACTTGGCCATCCCTCCTT
CAATAAATAAAACTTCTTTCACCTTAATTATTGACCCATTATTGAACAAG
AGCGCGATGTAACGTACCCCCTTTCTCTTGAACGACCGGTTGTAGTCCTC
TTTGCGCGAAAACAAGATCagatttcgaatgtttttaaattcgaacattc
gaaaatctaaggaatattagaaaaattagaaaatggtATTGCTGACTAGT
CAACTtcaaaactggacacacttccGCGGGAAATCTGTGAGCAGTTAGCC
TATTTAGTGTGTAAAGGAATATGATATTTGTGATTGAAACATTCCAGGTC
CCAAAACAAAGAATACAGTTTCTATTCATCTTAATGAATAGGAGCTTCAA
GCAGAATTAAAAAAACCTTGTCCTAGTTTACTCATTCTAATGGTATTACT
gggaataaacgccccccccccccatgaaaaaaaataaaattaataagCAT
CCGCCATTCGCTCGCTTTAGTTTAGTGGCTTTTGTCAAtcagctctagtt
tagacgtccgactttctgccctgcctattctaattgttagagagggcaga
aagtgggcacaaagttggtagttaaaatctttgcttggaaataattgaaa
gaagacattgcattgacgtcaaaagagggcaatgcattgactttagagag
cccactttaattcataattagaataggcagggcgaaaagtgggccgtcta
aactagagctcaGCAATCATCAATAATCAGCTCTAAATTTTATAGTCTTG
ATTGACGACAAGTGTTCTATCTTTAATTTTACAGATGGAATGGCTGATGA
TTGTGGGCCCAGCTTGTATACATTGTACTGCTTACTGCTTAAATACAATT
GTCATCTAAACTTTTTGTCAGCGGCATTTCTAATATAGTTTGCATTTATG
TTTTAttcttatttatatttattcTGATATAGTTtgcatttaaatttttc
ttcagcTACAAACATGGGTTTGATGGTATTTATCGTGTGGTAGTTGAAGG
TGAGGACcttggttaattttttttctccattgttCCATCTctttagatta
aaaaaaaatgaataatagcatttcaaattacataggccttttaaggccgg
tctccatttttgcgcgacatgagcgaaaactttttgacgtttttgtaagg
gtCATttgtcggttgaaaaatgaagcaattccattgacgtaacgaattaa
aaaagtagaacctttttcaactttttttttgttcgcgcaaaactttttta
taacgtaatcttttctctaggcaaaaaaggttaagaaaaaaactgtcccC
CATTTCCCgacaagtggagaccggctttTACTATACCGGGTCACCAAAAT
AAAGGTTTGCCAAGTTGTTGTGAGTTTACGGATAAACATTTTCTGTCGAT
TCTCATTTTATTGGACAAAAGAAAGCCACTTAAATTTTGGTGTATaaaac
aatttcaattcagtccatcaaaagttatgtttaaaaagctgaaaattttc
acctacttaaaatgtcaaaattgagTTTGTACGtcttaagaatttctttt
cctTTATAACTTTGAATATGGGAATTTTTTACTTTCAGAAAGATTCCACA
CGTTATTTGCTGGTGTAACGATGACGGCAACGAGAGGTCTTTTCATGACT
CTTGGACAGGTTTGGAGATCTCTTAATAcacctaaaaatcggttttgttt
taaataagagtgatatcatttgcttactcatcaattttaattcacaagct
ttttaacaTTGGCTTGACatagatgtggagcaagattggccagaaagagg
aaaagaaaaacatttttgcttatatcagcataatataacaatagtaagac
actgtcctgatatgaaatatgtgtctgatatataaacacttatgtaaaaa
gaaaacctttaacgGCGCGGTCGGCTTTTGAGAGGTCTGGTAATGAATTT
ATAAGGAAATGACGTCACTCTTTGTTTTATGAGAATGCCAATGCaatgaa
ttgacaaaaaaagtcTTCTTGGAAAACTCGAACCCAGCCTCCCCTGCTGG
CACACAACAGCGAtacattgtgggattgtttcggttGTATTACAatatag
aattccctcgaggaattcctaagacattactattgtaatacccccgaaac
aatccggcacaatgcatcgcttttttagaaagatAAGGTCTATTCTGAAC
TTGCACGTGTTTAATCTACGTTACATTTACTAACCCTTAACACCACGGGT
GAAGTCCACAGATAtgttatataaaacactagatagagcttttcCAACCC
TAATTGAAGCAAAACAATTCGctataaaaaagtttcaacagTGAAAACCA
AGATTTCTACTGTGACCTATtgtgacctactttcagcaaagatggcgtAC
TATTTTGCTTCACCTGTCTTGGCTTGGAAAAGatagagtagctctatcta
gtgttttatataagatatctgtggccAAGTCTCCTAGGAAGGAATGACGT
CGAAAGTTTTTACCTTTGAGAGGATATCAATGCAACGACTTTTTGAcctc
aattcatgatattcatgacgtaatgttttttcGGAAAGACCCCGGTAGTG
GCACATTTTATACaatttttgtctagtttaaatttgccactactggctta
AACCGGGATCTTTTCGtcgaaaacattacgtcatgaatatcatgaattac
ctAACTCTAACACAGACTCTTAAAGGGACGTTTGTTCTTAACGTTTCACG
TTTTCCCATCCAGGAATTTCGGATCTAGCCCCTCTGTTTGGGGCATTAAA
ATCAATGAATGTGGACGTACTGgctaaaatatttcatttgcCTTCAACGA
GTTTCCACTTGATTTTCGTTCAAGAAGCAATCCTGATATTTTTCGCAGGA
TGTCTACCTTGCTTTCCGCTTAGTCTACTTTACTCAGCTTTACTACTCTT
TTCTTCCCTCATTAAATAGGTGGCAACTTATGACCAAACAAAACAGATAC
TCATTATGACAGGGTAAGTTTTTCTATATTCAATGAAACAATCTCGCGGA
AGATTTTTTGGCCGTCACATTTCTACATAACAGCCCTCAACCGTAAATTT
TAACACATTTTAGTCCTCATTTCACATGAATTGATTAAAACCTTGAccaa
aaaaagtgttttagtgcgaaatattttaataaaagctCGATTcacgaaaa
atgttttaattcgATACTTGGTACtgtttttcgctattttttgttgaaag
tagGACCCATATCTAAGTATCGTTGGAAAATGATTGCGTAAATCTAATTT
ATacccttttttttttcttgcagATACTTCAAAGATAATGTCCCTACGCA
CGTACTTGGTAGCTTTTTTGCAGTAAGCGAATTCCTCGATTCTCCCCATA
TAGTtaaaagcccgaagagctacgATCCCCTAATTTATATCTGAAACATG
CCCCCCCCTTTCCCCCTTTCCCCCTTTCCCCCATTGTCAGCGTTGAGTCG
GCCATTTCCGGACTCAACACTGATAGTGGTCTGGGGACGGATTTTTATCT
TTCAATAATGTTTAGAATTCTTCTGTCTCAAGATATTTGCTGGGGGATTG
TAGAGTGGAATCAACCATTACTctgttaaggccggtctccacttgcgcgc
gctgcgatcgcactttttgacttcaatcctttttgcttggaaaaaagatt
acgtcataaaaatgtagcgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGATCgtgccaatggagttgcttcat
ttttcttttgaccaatagcgtggaagctttgctcgaaaaagtgcgatcga
agcgcgcgcaagtggagaccgacctTTAGCTGTCAGTTAAAAAGAAGAGG
ATTAAATATTGTATTGATGAATAATCTGGACAAAATTGAAAGATAAATTT
CTTAAGTATTAtcaagggggagggggtgttTAAGTTCCCACCAACTCAGC
AAATGAGTCGCTTGGACTGGATAATCTGATCCGAACAAGCGGTAACCAAC
TGGAAGCTGAGAGTAAATATGATACTCTACTTCCGCTTTCTATatccata
gtcattataaaaaaacctggtctggcaatgtattgttttagctttacgat
ttttgatcacgttaccaagatCTCCTGTTGGggttggtctattttctaat
cacatggtAAAAAAGtctgcaaaataaatcgattttggtacgtgCGCTCC
ATCTGTTAAcgataaaaagagacaaaagccttacAAAAAGACCAGTGTTT
TTGTGACTCTAACATAAGTAGAAAAGAGGATGAACCACTGGGGTCAGTTT
CTCGATTCCGGCCAACCAAAATCGCTAGACAAAACTTTAACACTGATATG
GCTTCTTTGTGGAAGAAACTACAATCAAAGATGGCAAATAAAGCCAAATG
AAGGTCCCATCTCAGCCCCGTcgacagatgaatgtttatactTATTTGTT
TCTAGGGAACGATAGCGACAAGTATCACACAGCCgtttgacgtcatcaaa
acacgGATGATGAATGCTAAACCTGGTGAATATCAGGTAGGTTTCCAGCA
CACTATGTTATTTCAACTTTCATCTAATGTTTTCAACGCCCATATAATGT
TAgctgaacgttgaaacaactttgCGTGTCAAGTGGATTGCTAACGGAAC
AGGTACCTCACCAAAAACAAATTAACGGAAAATATCATGCTACtgggact
tgaaattttcatccataattgtttttttttcgcagGGTATTTATCATTGT
GCGAAAGACATATCAAAAGATGGTATCTTCAAAGGATTGTACCGAGTAAG
ACTCACTTCATTTTCTTATTCAAACTAATTTCAAACCATCTAGACGTGTT
TTCATTTACGTCCACTTTATTTAGGGTGCGCTTTTCAACCTATTCTGCGA
CTTTATTAATGGATTTTGCTGTAACTCAAACAAGTAGTTTCTATGTTGAC
AGCCTCAGAAAtgtgcttaaaaagctccattggTTTTTAACAtaatattc
ttgatatgcgtgaGTCGTTTTCCTAataaaaaacctgaaaaaagccggga
tttgaccaatgtttgttactaaaaatagaaacacggtgGCCGAAACCCGA
CTTTTTCTGGTGCgtccgttagacgttaatttgtTTTGAGACCAAAATTT
GAATACTAACAGAATAATAAAAACTGATTAATTTTTGATATTTATCCAAC
AGGGTTTTGTACCACGCTGGATCCGCCTTGGTCCGCACACCATCCTAACA
TGGGTATTTCTTGAACAATTACGTAAGGCGTTTCCTTTGAAAAACGATTA
ATACTAAGGGGTGATACCGTGTGTATAAAGGTCTATGTAAACTGTACAAC
ATATTACCAGGCTATAAATTTACCGAGTATCGGCATGAAACCATAGCCTT
TACAAGGAATTTTTGCTGTGCGCGGAGCAGTTAGGATCTGTTTGGATATT
AGCCATGTTTATTCTGCTTTTGTGCCCACGTAACGTTACATGAATGTCAA
AACGTCTTTATCGCGGGTCGGGATCTATCTacaattaaggtcataatatt
tgagaaaaaatgaaaattccccaggaagttttgaaaccacaatcgattta
taagtgctctaaagtataggttcgaagggtagagttttaacgctagactt
aggacttacgaccttaggatctgacgatctaaaagttcaaaaatagtcca
ataagactcagaatatagcctggaagtctgccaacccatcccaaatcgaa
atattcgattaagttaaagagatagcccaaaatcgactttctc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038139XLOC_038139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060643-exon-scaffold_348-1491911889:404358..404472TCONS_00060643-exon-scaffold_348-1491911889:404358..404472Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:404358..404472TCONS_00060643-exon-scaffold_348-1510915933:404358..404472Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:404358..404472TCONS_00060643-exon-scaffold_348-1575043694:404358..404472Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:410300..410402TCONS_00060643-exon-scaffold_348-1491911889:410300..410402Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:410300..410402TCONS_00060643-exon-scaffold_348-1510915933:410300..410402Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:410300..410402TCONS_00060643-exon-scaffold_348-1575043694:410300..410402Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:410971..411090TCONS_00060643-exon-scaffold_348-1491911889:410971..411090Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:410971..411090TCONS_00060643-exon-scaffold_348-1510915933:410971..411090Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:410971..411090TCONS_00060643-exon-scaffold_348-1575043694:410971..411090Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:411489..411558TCONS_00060643-exon-scaffold_348-1491911889:411489..411558Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:411489..411558TCONS_00060643-exon-scaffold_348-1510915933:411489..411558Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:411489..411558TCONS_00060643-exon-scaffold_348-1575043694:411489..411558Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:412018..412062TCONS_00060643-exon-scaffold_348-1491911889:412018..412062Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:412018..412062TCONS_00060643-exon-scaffold_348-1510915933:412018..412062Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:412018..412062TCONS_00060643-exon-scaffold_348-1575043694:412018..412062Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:412711..412759TCONS_00060643-exon-scaffold_348-1491911889:412711..412759Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:412711..412759TCONS_00060643-exon-scaffold_348-1510915933:412711..412759Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:412711..412759TCONS_00060643-exon-scaffold_348-1575043694:412711..412759Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:414246..414287TCONS_00060643-exon-scaffold_348-1491911889:414246..414287Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:414246..414287TCONS_00060643-exon-scaffold_348-1510915933:414246..414287Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:414246..414287TCONS_00060643-exon-scaffold_348-1575043694:414246..414287Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:416413..416456TCONS_00060643-exon-scaffold_348-1491911889:416413..416456Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:416413..416456TCONS_00060643-exon-scaffold_348-1510915933:416413..416456Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:416413..416456TCONS_00060643-exon-scaffold_348-1575043694:416413..416456Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:417046..417116TCONS_00060643-exon-scaffold_348-1491911889:417046..417116Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:417046..417116TCONS_00060643-exon-scaffold_348-1510915933:417046..417116Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:417046..417116TCONS_00060643-exon-scaffold_348-1575043694:417046..417116Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:418427..418470TCONS_00060643-exon-scaffold_348-1491911889:418427..418470Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:418427..418470TCONS_00060643-exon-scaffold_348-1510915933:418427..418470Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:418427..418470TCONS_00060643-exon-scaffold_348-1575043694:418427..418470Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:418781..418829TCONS_00060643-exon-scaffold_348-1491911889:418781..418829Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:418781..418829TCONS_00060643-exon-scaffold_348-1510915933:418781..418829Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:418781..418829TCONS_00060643-exon-scaffold_348-1575043694:418781..418829Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:420563..420643TCONS_00060643-exon-scaffold_348-1491911889:420563..420643Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:420563..420643TCONS_00060643-exon-scaffold_348-1510915933:420563..420643Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:420563..420643TCONS_00060643-exon-scaffold_348-1575043694:420563..420643Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:420843..420902TCONS_00060643-exon-scaffold_348-1491911889:420843..420902Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:420843..420902TCONS_00060643-exon-scaffold_348-1510915933:420843..420902Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:420843..420902TCONS_00060643-exon-scaffold_348-1575043694:420843..420902Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1491911889:421310..421900TCONS_00060643-exon-scaffold_348-1491911889:421310..421900Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1510915933:421310..421900TCONS_00060643-exon-scaffold_348-1510915933:421310..421900Clytia hemisphaericaexon
TCONS_00060643-exon-scaffold_348-1575043694:421310..421900TCONS_00060643-exon-scaffold_348-1575043694:421310..421900Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:404358..421900 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.80381	0	1.48053	0	6.8527	1.41927	0.769173	0.309801	2.04065	3.99432	0.885626	0.926365	2.92205	1.7027	1.32314	1.07237	8.05863	7.96563	4.09756	5.77332	7.92303	10.846	3.54535	3.12355	5.85601	4.93993	4.05172	2.94231	2.22629	2.3199
Blast
[Close]
BLAST of TCONS_00060643 vs. Swiss-Prot (Human)
Match: DIC (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 5.470e-104
Identity = 148/286 (51.75%), Postives = 197/286 (68.88%), Query Frame = 3 
Query:  126 MSNKPKRQRWYLGGPAGAGAVMFTHPLDLLKVHLQQAKTTNRGLISTALKVIKNDGFLGLYGGISASILRQLTYNTTRFALYERLSAKLLENRNDALPFYQKLAIGCVSGFVAGVVGNPADMVLTRMQNDVRLPKDMRRNYKHGFDGIYRVVVEERFHTLFAGVTMTATRGLFMTLGQVATYDQTKQILIMTGYFKDNVPTHVLGSFFAGTIATSITQPFDVIKTRMMNAKPGEYQGIYHCAKDISKDGIFKGLYRGFVPRWIRLGPHTILTWVFLEQLRKAFPLK 983
            M+ + +  RWY GG A  GA   THPLDLLKVHLQ  +     +   AL+V++ DG L LY G+SAS+ RQ+TY+ TRFA+YE +  ++ +     LPF++K+ +G VSG   G VG PAD+V  RMQNDV+LP+  RRNY H  DG+YRV  EE    LF+G TM ++RG  +T+GQ++ YDQ KQ+++ TGY  DN+ TH + SF AG  AT + QP DV+KTR+MN+K GEYQG++HCA + +K G     Y+G VP  IRL PHT+LT+VFLEQLRK F +K
Sbjct:    1 MAAEARVSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSK-GEYQGVFHCAVETAKLGPL-AFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIK 284
The following BLAST results are available for this feature:
BLAST of TCONS_00060643 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIC5.470e-10451.75Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
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