TCONS_00060649 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060649
Unique NameTCONS_00060649
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1292

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060649 ID=TCONS_00060649|Name=TCONS_00060649|organism=Clytia hemisphaerica|type=transcript|length=1292bp
TCACTCATCCATTGGATCTGCTCAAGGTTCACCTACAGCAAGCAAAAACA
ACCAATAGAGGATTAATCTCAACTGCTTTGAAAGTCATCAAGAATGATGG
TTTCTTAGGGTTGTATGGTGGTATCAGTGCTTCCATATTACGACAGCTCA
CTTACAACACAACACGTTTTGCCTTATATGAAAGACTCAGTGCAAAACTA
CTGGAAAATCGTAATGATGCCTTACCGTTTTATCAGAAGCTTGCTATTGG
TTGTGTAAGTGGGTTTGTCGCTGGTGTTGTTGGCAATCCTGCAGACATGG
TTCTGACCAGAATGCAAAACGATGTCAGACTGCCCAAAGATATGCGAAGA
AAcTACAAACATGGGTTTGATGGTATTTATCGTGTGGTAGTTGAAGAAAG
ATTCCACACGTTATTTGCTGGTGTAACGATGACGGCAACGAGAGGTCTTT
TCATGACTCTTGGACAGGTGGCAACTTATGACCAAACAAAACAGATACTC
ATTATGACAGGATACTTCAAAGATAATGTCCCTACGCACGTACTTGGTAG
CTTTTTTGCAGGAACGATAGCGACAAGTATCACACAGCCgtttgacgtca
tcaaaacacgGATGATGAATGCTAAACCTGGTGAATATCAGGGTATTTAT
CATTGTGCGAAAGACATATCAAAAGATGGTATCTTCAAAGGATTGTACCG
AGGTTTTGTACCACGCTGGATCCGCCTTGGTCCGCACACCATCCTAACAT
GGGTATTTCTTGAACAATTACGTAAGGCGTTTCCTTTGAAAAACGATTAA
TACTAAGGGGTGATACCGTGTGTATAAAGGTCTATGTAAACTGTACAACA
TATTACCAGGCTATAAATTTACCGAGTATCGGCATGAAACCATAGCCTTT
ACAAGGAATTTTTGCTGTGCGCGGAGCAGTTAGGATCTGTTTGGATATTA
GCCATGTTTATTCTGCTTTTGTGCCCACGTAACGTTACATGAATGTCAAA
ACGTCTTTATCGCGGGTCGGGATCTATCTacaattaaggtcataatattt
gagaaaaaatgaaaattccccaggaagttttgaaaccacaatcgatttat
aagtgctctaaagtataggttcgaagggtagagttttaacgctagactta
ggacttacgaccttaggatctgacgatctaaaagttcaaaaatagtccaa
taagactcagaatatagcctggaagtctgccaacccatcccaaatcgaaa
tattcgattaagttaaagagatagcccaaaatcgactttctc
Run BLAST on NCBI

transcript from alignment at scaffold_348:410540..421900+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060649 ID=TCONS_00060649|Name=TCONS_00060649|organism=Clytia hemisphaerica|type=transcript|length=11361bp|location=Sequence derived from alignment at scaffold_348:410540..421900+ (Clytia hemisphaerica)
TCACTCATCCATTGGATCTGCTCAAGGTAGAATACAATACCATGTAATTA
TTTGTCTACTTTAAACAGATTCGAATCACATAATAAGTCACATTAGGCTT
TGATGTGTAAATTTTGGGTGTTTAACCTTTTAATAAACCAAAGTTGAAAC
AGGgatgttatttttttaatagataTAATAGATATTTCTCCCAATTCACT
GTCTCTGTTCAGTCAGTAAACCAAAATTCACTTCCAACTATACCAAGTGG
CAATTAAGTCCTCGAGTTCcacatggacccgtagctcaatggtagagcaa
atgcccacaaatggcatggttgtgagttcaaGTCTTGCTGGATCCGTTAG
TTTTCGAATGGCTCtcggtggctggtcagaagacaacatgagagctactg
tattcacttcattacTATATGATTATTTTAGGTTCACCTACAGCAAGCAA
AAACAACCAATAGAGGATTAATCTCAACTGCTTTGAAAGTCATCAAGAAT
GATGGTTTCTTAGGGTTGTATGGTGGTATCAGTGCTTCCATATTACGACA
GGTTTCATCATTACATCTTCTTTCCTTCAGTGTACAAGGTCTATGTAATC
ATGCAATTTAAAGTCTCAGGGGCACTTGAAACGATTAAATTTGACTTTTG
ATATTCTATGATATTCTTATAGTATTCAGACATTTTAGAAGATAGACATT
TTGATAATATCAAAGCTCATACTTCAGGTGTAGAACAATAAACTCAATAT
AAATTCACTCCCGATCTGTATAATATCACtgtctcactaacattctgctG
ACTTGTTATTGTGAAGGTTccgatcacagacttgcaccgtGTTCAAATCC
CAAGTACTTTCCTAACAGGGTATTAGGGAAGATAGACTCTTAACCTACAC
TCATCCCattcaaacatttttgtaattGTTTGTCTTCTTCTTTGCTTAGC
TCACTTACAACACAACACGTTTTGCCTTATATGAAAGACTCAGTGCAAAA
CTACTGGAAAATCGTAATGGTAAGTTTTTATGAAGTATCTTTAGTAATGA
GTTAAGTCAGACTTGACTGAGTACAAAGCTCAAGGGTCAAGAACGGTTTA
GAAAGTGAGGATCTTTATTTGGAAGTGATAATTTTAGGGATGTCATTTTG
GATAAGCAATTTTTTATATATCTTATTTTGTCAGGATtatataatttgct
gtatcttGACTTCTTTGGAAGAAATCAATGTCCAAATCAATGTCCATTTT
TCATATTGAAGACATTTTTAATGTGGTATTTTGTTGGTAGTAATTCAAAA
CACCTCTCTATTCCCTCCTCCCCTTCATCGACCCAAAGACCACACCTTCT
GCACTATGTAATAATCTATATACCACTTAAAAAATTTTACGTAAAGAATT
GTAAGATCTATATCCAATATGTTGTTATCACGAGATTTACTTTAAATTGC
ataatatttcttaaaattgtTCCTTTAGATGCCTTACCGTTTTATCAGAA
GCTTGCTATTGGTTGTGTAAGTGGTGAGTTTTATATATATTTCTTTTCcg
attcgaaaaaaaaaaattctaaattggAGAGagacattttttttacaaaa
taatacaAATTAAAGCAAACCCTCTttcaattaaagtttttcatgtttCT
AGGCCAGTTGTATAGAGATAATCGTTCAAAGCTATATAAGACTGTGGATA
TATGTAGCTCTTTGTTTATGATTATTGACAAGTTGACAAAGATGGTGTCT
CCAATCATTGCAAAGTAGAGAGTCGGTGTCTCCTTTAACAGTATCAAAAC
AATacaatctttttttataagcataacctttatacacgttttttttataa
gaacatctaaaatttttgaagcctttggatgttcttaactttttgagttt
taagcctaaaaatgtccttaaacatgttcttatttttctcattttatgaa
tatttttgtccattttatcaagaatttcggtgtttttgagtcctcaaagc
cttaacttgttctttacaTTAAGCTTAGGTCGAAAAATTCatcattcaaa
ttttgttttaaaaatgggATCAATTATTAAAGAATTAAACAGTTTTTAAA
CTGTACACCTTCTTACAAGGTGGATGAAAtcattaaactttttaaatgat
GGTCCATTTTCTGGTTTTTAGGGTTTGTCGCTGGTGTTGTTGGCAATCCT
GCAGACATGGTTCTGACCAGGTAAATTATGAAATCATAAACCATCGTTAA
ATTATACGTCAATTACTTTTGTGGTCCAtttattgaaaaatcaaagaaat
tcaattaaaaaactCGAGTAAAATTTCGCATTATAATGCAATAACTtcct
aatttttaaaaatcttccaaACTGTTTAGGTTTTGTTAGCTGGCAAAATC
AACATCCTTTAAAAATACTGCTAGTATTTTAGCAAGTAGTGATCGGTTTG
AATTCAAGAATTTAGAATTGAATACTGAGCCATTTCTACCCTTTTGGTTT
TTGACATGACATGTTTTAAGTCCACCCTAGGAAAATAAGGTACCTTCTGA
ATTTTAGGCACCCCAAATAAACAGCAACTAGTAGGGGTtattataataca
tttttttgctcagaatttacatgctctttcagatggtatcaataattttc
gtttattttgactttaaaaaatcagccattttcctACCCCTTATTTcccc
ttgcaattttgcctatAGCGTCACTATTTtagtcataaaaagttttcccg
ggcctaatccgcgtcctccctctcaaaaatatcttttagtatactgttct
ttggaatagactaaaaatggttgGGTCGTAgaaagatgtcacgggacccC
AGGCTTGGTCCTCTactaaacacaaaaaaaatctttaaacagcGCATGTA
AAAAGATCTTCCCATGTCAAGTGATTTTAAGTACTATTAGATTTTGCGTC
TATAAATCGGGTGACTCAAAGTCATGAAAGAAATATCGTTCAGCTTGTGC
AATGACTTCAATAAGTTATTCAAAATCGCCTTTTCGAGGACTCCACTTTC
TTCGCCAAGACTGTATGATGAAATTGAACGCTTTATGCGacataacccag
ctggcacacaacgttgtttcagcgTTGacctaacgttaaatggaccttgt
gaacgttagataaacgttgaaacaacgttgtttgccaGCTGGCAAAGTAT
AGATCTACAATGATACATGATTAAGAAATggtgtatttcttctcaatact
ttaagtttcttccttacgcattcatcagttgattagaaatcTACAATGAT
CTACAATGATCTACAAGGATCTACAATGATCTATAAGGATCTACAATGAT
CTACAAGGATCTATAATGATCTACAATGATACATACAATGATCTACAAGG
ATCTACAATGATTTACAAGGATATATACAATGATCTACAAGGATATACAA
TGATCTATAAGGACCTACAATGATCTACAATGATCTACAATGATCTACAA
GGATATACAATGATCTATAAGGATCTACAATGATCTACAAGGATCTATAA
TGATCTACAATGATACAAACAATGATCTACAAGGATCTACAATGATCTAC
AAGGATCTACAAGGATCTACAAGGATCTACAAGGATCTACAAGGATCTAC
AATGATCTACAATGATACATGTCAAGGTTTATGAAGACTTTGATTCTTCC
ATTTAGAATGCAAAACGATGTCAGACTGCCCAAAGATATGCGAAGAAAGT
AAGTTACCAATATTCACCCCTCAAAGTTTACAGGGTATCTGGGGTTCAGA
GTAGAGCACTGAAGATAATATTCTATTCAGGATATGCACCCCTGTGACAT
TTGCTGACATAACGTAACTTTTACAATAGCTGGTTGCTTGATTAAAAaca
taatgggctcttccagaaaatgttcgtacgttcgtgccttgtccgggggg
gggggtaaacttgctatGTTTGGGATTAATTTTGCTCtatttgagggtaa
ttttgagtgtcctgggggtcaactaatgcttgtccgggggttagacctgc
tgtccgagGGGTCAAAAGTCACGATATCCGGGGGTAgatttatttctaaa
aaatgttatatcctccacccccccatattcaaaattttctggaaaagccc
aatttcatgaagtcattgcagtggtacATATCATGGATAAACTTGTCTAT
CCTTGTCGGCGCGGTCGGACTTGTGACGAAAATACAAGGGAAATTATCCT
TGACGAATGTATCAAAAACACAAGTGTTGGAGTGCTCTTGTGAAACATAT
ACATAAGATGCCCTTTCATTGAAGTGATAAAGTAATGTCAATAAAGTTAA
GATTAATTCGAATGCTAAAAATAGTTTGCACTCGACTGTAGAGACTGCAG
AGACTCTCTAAAATGTTTCTAGAGTTTTTGCGGGAATATCCTTAGAATTG
AAAAAATGCCGTGCGCCGAGAATAAATcttccttgtaaattcattaccag
tcTCCTAAAAAGCCGACCGCGCTTCTAAGGGTTGGTGGGTGTATTTGATT
CTGCATAACAATATTTCTTCTGACTTAGGCTTCAATTATTTCTCAGATAC
CCTTGTTATTGCACTCAACTATGCACAGCATGCTTATCAGGACCATCACA
TACACTCACAATGCACTTCACAAAAGTATAACACTTATCTATGAACTCTC
ACTCTAAAATATTACATAGATAGATAGAaacgatattttacgtggataac
ccagtaatctaggacttttaggcagtctttcgattgttttcacggggtcc
acggccagcctgCTCGGTTTtctatgaactgaacagaacattgggaggag
cggggattcgaaccgcgaacCCCTGGTTTAGGACGCTAACGCCTTTGGCC
ACTTGGCCATCCCTCCTTCAATAAATAAAACTTCTTTCACCTTAATTATT
GACCCATTATTGAACAAGAGCGCGATGTAACGTACCCCCTTTCTCTTGAA
CGACCGGTTGTAGTCCTCTTTGCGCGAAAACAAGATCagatttcgaatgt
ttttaaattcgaacattcgaaaatctaaggaatattagaaaaattagaaa
atggtATTGCTGACTAGTCAACTtcaaaactggacacacttccGCGGGAA
ATCTGTGAGCAGTTAGCCTATTTAGTGTGTAAAGGAATATGATATTTGTG
ATTGAAACATTCCAGGTCCCAAAACAAAGAATACAGTTTCTATTCATCTT
AATGAATAGGAGCTTCAAGCAGAATTAAAAAAACCTTGTCCTAGTTTACT
CATTCTAATGGTATTACTgggaataaacgccccccccccccatgaaaaaa
aataaaattaataagCATCCGCCATTCGCTCGCTTTAGTTTAGTGGCTTT
TGTCAAtcagctctagtttagacgtccgactttctgccctgcctattcta
attgttagagagggcagaaagtgggcacaaagttggtagttaaaatcttt
gcttggaaataattgaaagaagacattgcattgacgtcaaaagagggcaa
tgcattgactttagagagcccactttaattcataattagaataggcaggg
cgaaaagtgggccgtctaaactagagctcaGCAATCATCAATAATCAGCT
CTAAATTTTATAGTCTTGATTGACGACAAGTGTTCTATCTTTAATTTTAC
AGATGGAATGGCTGATGATTGTGGGCCCAGCTTGTATACATTGTACTGCT
TACTGCTTAAATACAATTGTCATCTAAACTTTTTGTCAGCGGCATTTCTA
ATATAGTTTGCATTTATGTTTTAttcttatttatatttattcTGATATAG
TTtgcatttaaatttttcttcagcTACAAACATGGGTTTGATGGTATTTA
TCGTGTGGTAGTTGAAGGTGAGGACcttggttaattttttttctccattg
ttCCATCTctttagattaaaaaaaaatgaataatagcatttcaaattaca
taggccttttaaggccggtctccatttttgcgcgacatgagcgaaaactt
tttgacgtttttgtaagggtCATttgtcggttgaaaaatgaagcaattcc
attgacgtaacgaattaaaaaagtagaacctttttcaactttttttttgt
tcgcgcaaaacttttttataacgtaatcttttctctaggcaaaaaaggtt
aagaaaaaaactgtcccCCATTTCCCgacaagtggagaccggctttTACT
ATACCGGGTCACCAAAATAAAGGTTTGCCAAGTTGTTGTGAGTTTACGGA
TAAACATTTTCTGTCGATTCTCATTTTATTGGACAAAAGAAAGCCACTTA
AATTTTGGTGTATaaaacaatttcaattcagtccatcaaaagttatgttt
aaaaagctgaaaattttcacctacttaaaatgtcaaaattgagTTTGTAC
GtcttaagaatttcttttcctTTATAACTTTGAATATGGGAATTTTTTAC
TTTCAGAAAGATTCCACACGTTATTTGCTGGTGTAACGATGACGGCAACG
AGAGGTCTTTTCATGACTCTTGGACAGGTTTGGAGATCTCTTAATAcacc
taaaaatcggttttgttttaaataagagtgatatcatttgcttactcatc
aattttaattcacaagctttttaacaTTGGCTTGACatagatgtggagca
agattggccagaaagaggaaaagaaaaacatttttgcttatatcagcata
atataacaatagtaagacactgtcctgatatgaaatatgtgtctgatata
taaacacttatgtaaaaagaaaacctttaacgGCGCGGTCGGCTTTTGAG
AGGTCTGGTAATGAATTTATAAGGAAATGACGTCACTCTTTGTTTTATGA
GAATGCCAATGCaatgaattgacaaaaaaagtcTTCTTGGAAAACTCGAA
CCCAGCCTCCCCTGCTGGCACACAACAGCGAtacattgtgggattgtttc
ggttGTATTACAatatagaattccctcgaggaattcctaagacattacta
ttgtaatacccccgaaacaatccggcacaatgcatcgcttttttagaaag
atAAGGTCTATTCTGAACTTGCACGTGTTTAATCTACGTTACATTTACTA
ACCCTTAACACCACGGGTGAAGTCCACAGATAtgttatataaaacactag
atagagcttttcCAACCCTAATTGAAGCAAAACAATTCGctataaaaaag
tttcaacagTGAAAACCAAGATTTCTACTGTGACCTATtgtgacctactt
tcagcaaagatggcgtACTATTTTGCTTCACCTGTCTTGGCTTGGAAAAG
atagagtagctctatctagtgttttatataagatatctgtggccAAGTCT
CCTAGGAAGGAATGACGTCGAAAGTTTTTACCTTTGAGAGGATATCAATG
CAACGACTTTTTGAcctcaattcatgatattcatgacgtaatgttttttc
GGAAAGACCCCGGTAGTGGCACATTTTATACaatttttgtctagtttaaa
tttgccactactggcttaAACCGGGATCTTTTCGtcgaaaacattacgtc
atgaatatcatgaattacctAACTCTAACACAGACTCTTAAAGGGACGTT
TGTTCTTAACGTTTCACGTTTTCCCATCCAGGAATTTCGGATCTAGCCCC
TCTGTTTGGGGCATTAAAATCAATGAATGTGGACGTACTGgctaaaatat
ttcatttgcCTTCAACGAGTTTCCACTTGATTTTCGTTCAAGAAGCAATC
CTGATATTTTTCGCAGGATGTCTACCTTGCTTTCCGCTTAGTCTACTTTA
CTCAGCTTTACTACTCTTTTCTTCCCTCATTAAATAGGTGGCAACTTATG
ACCAAACAAAACAGATACTCATTATGACAGGGTAAGTTTTTCTATATTCA
ATGAAACAATCTCGCGGAAGATTTTTTGGCCGTCACATTTCTACATAACA
GCCCTCAACCGTAAATTTTAACACATTTTAGTCCTCATTTCACATGAATT
GATTAAAACCTTGAccaaaaaaagtgttttagtgcgaaatattttaataa
aagctCGATTcacgaaaaatgttttaattcgATACTTGGTACtgtttttc
gctattttttgttgaaagtagGACCCATATCTAAGTATCGTTGGAAAATG
ATTGCGTAAATCTAATTTATacccttttttttttcttgcagATACTTCAA
AGATAATGTCCCTACGCACGTACTTGGTAGCTTTTTTGCAGTAAGCGAAT
TCCTCGATTCTCCCCATATAGTtaaaagcccgaagagctacgATCCCCTA
ATTTATATCTGAAACATGCCCCCCCCTTTCCCCCTTTCCCCCTTTCCCCC
ATTGTCAGCGTTGAGTCGGCCATTTCCGGACTCAACACTGATAGTGGTCT
GGGGACGGATTTTTATCTTTCAATAATGTTTAGAATTCTTCTGTCTCAAG
ATATTTGCTGGGGGATTGTAGAGTGGAATCAACCATTACTctgttaaggc
cggtctccacttgcgcgcgctgcgatcgcactttttgacttcaatccttt
ttgcttggaaaaaagattacgtcataaaaatgtagcgcNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATCgtg
ccaatggagttgcttcatttttcttttgaccaatagcgtggaagctttgc
tcgaaaaagtgcgatcgaagcgcgcgcaagtggagaccgacctTTAGCTG
TCAGTTAAAAAGAAGAGGATTAAATATTGTATTGATGAATAATCTGGACA
AAATTGAAAGATAAATTTCTTAAGTATTAtcaagggggagggggtgttTA
AGTTCCCACCAACTCAGCAAATGAGTCGCTTGGACTGGATAATCTGATCC
GAACAAGCGGTAACCAACTGGAAGCTGAGAGTAAATATGATACTCTACTT
CCGCTTTCTATatccatagtcattataaaaaaacctggtctggcaatgta
ttgttttagctttacgatttttgatcacgttaccaagatCTCCTGTTGGg
gttggtctattttctaatcacatggtAAAAAAGtctgcaaaataaatcga
ttttggtacgtgCGCTCCATCTGTTAAcgataaaaagagacaaaagcctt
acAAAAAGACCAGTGTTTTTGTGACTCTAACATAAGTAGAAAAGAGGATG
AACCACTGGGGTCAGTTTCTCGATTCCGGCCAACCAAAATCGCTAGACAA
AACTTTAACACTGATATGGCTTCTTTGTGGAAGAAACTACAATCAAAGAT
GGCAAATAAAGCCAAATGAAGGTCCCATCTCAGCCCCGTcgacagatgaa
tgtttatactTATTTGTTTCTAGGGAACGATAGCGACAAGTATCACACAG
CCgtttgacgtcatcaaaacacgGATGATGAATGCTAAACCTGGTGAATA
TCAGGTAGGTTTCCAGCACACTATGTTATTTCAACTTTCATCTAATGTTT
TCAACGCCCATATAATGTTAgctgaacgttgaaacaactttgCGTGTCAA
GTGGATTGCTAACGGAACAGGTACCTCACCAAAAACAAATTAACGGAAAA
TATCATGCTACtgggacttgaaattttcatccataattgtttttttttcg
cagGGTATTTATCATTGTGCGAAAGACATATCAAAAGATGGTATCTTCAA
AGGATTGTACCGAGTAAGACTCACTTCATTTTCTTATTCAAACTAATTTC
AAACCATCTAGACGTGTTTTCATTTACGTCCACTTTATTTAGGGTGCGCT
TTTCAACCTATTCTGCGACTTTATTAATGGATTTTGCTGTAACTCAAACA
AGTAGTTTCTATGTTGACAGCCTCAGAAAtgtgcttaaaaagctccattg
gTTTTTAACAtaatattcttgatatgcgtgaGTCGTTTTCCTAataaaaa
acctgaaaaaagccgggatttgaccaatgtttgttactaaaaatagaaac
acggtgGCCGAAACCCGACTTTTTCTGGTGCgtccgttagacgttaattt
gtTTTGAGACCAAAATTTGAATACTAACAGAATAATAAAAACTGATTAAT
TTTTGATATTTATCCAACAGGGTTTTGTACCACGCTGGATCCGCCTTGGT
CCGCACACCATCCTAACATGGGTATTTCTTGAACAATTACGTAAGGCGTT
TCCTTTGAAAAACGATTAATACTAAGGGGTGATACCGTGTGTATAAAGGT
CTATGTAAACTGTACAACATATTACCAGGCTATAAATTTACCGAGTATCG
GCATGAAACCATAGCCTTTACAAGGAATTTTTGCTGTGCGCGGAGCAGTT
AGGATCTGTTTGGATATTAGCCATGTTTATTCTGCTTTTGTGCCCACGTA
ACGTTACATGAATGTCAAAACGTCTTTATCGCGGGTCGGGATCTATCTac
aattaaggtcataatatttgagaaaaaatgaaaattccccaggaagtttt
gaaaccacaatcgatttataagtgctctaaagtataggttcgaagggtag
agttttaacgctagacttaggacttacgaccttaggatctgacgatctaa
aagttcaaaaatagtccaataagactcagaatatagcctggaagtctgcc
aacccatcccaaatcgaaatattcgattaagttaaagagatagcccaaaa
tcgactttctc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038139XLOC_038139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060649-exon-scaffold_348-1491911889:410540..410565TCONS_00060649-exon-scaffold_348-1491911889:410540..410565Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:410540..410565TCONS_00060649-exon-scaffold_348-1510915933:410540..410565Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:410540..410565TCONS_00060649-exon-scaffold_348-1575043694:410540..410565Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:410971..411090TCONS_00060649-exon-scaffold_348-1491911889:410971..411090Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:410971..411090TCONS_00060649-exon-scaffold_348-1510915933:410971..411090Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:410971..411090TCONS_00060649-exon-scaffold_348-1575043694:410971..411090Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:411489..411558TCONS_00060649-exon-scaffold_348-1491911889:411489..411558Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:411489..411558TCONS_00060649-exon-scaffold_348-1510915933:411489..411558Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:411489..411558TCONS_00060649-exon-scaffold_348-1575043694:411489..411558Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:412018..412062TCONS_00060649-exon-scaffold_348-1491911889:412018..412062Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:412018..412062TCONS_00060649-exon-scaffold_348-1510915933:412018..412062Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:412018..412062TCONS_00060649-exon-scaffold_348-1575043694:412018..412062Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:412711..412759TCONS_00060649-exon-scaffold_348-1491911889:412711..412759Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:412711..412759TCONS_00060649-exon-scaffold_348-1510915933:412711..412759Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:412711..412759TCONS_00060649-exon-scaffold_348-1575043694:412711..412759Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:414246..414287TCONS_00060649-exon-scaffold_348-1491911889:414246..414287Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:414246..414287TCONS_00060649-exon-scaffold_348-1510915933:414246..414287Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:414246..414287TCONS_00060649-exon-scaffold_348-1575043694:414246..414287Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:416413..416456TCONS_00060649-exon-scaffold_348-1491911889:416413..416456Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:416413..416456TCONS_00060649-exon-scaffold_348-1510915933:416413..416456Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:416413..416456TCONS_00060649-exon-scaffold_348-1575043694:416413..416456Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:417046..417116TCONS_00060649-exon-scaffold_348-1491911889:417046..417116Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:417046..417116TCONS_00060649-exon-scaffold_348-1510915933:417046..417116Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:417046..417116TCONS_00060649-exon-scaffold_348-1575043694:417046..417116Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:418427..418470TCONS_00060649-exon-scaffold_348-1491911889:418427..418470Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:418427..418470TCONS_00060649-exon-scaffold_348-1510915933:418427..418470Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:418427..418470TCONS_00060649-exon-scaffold_348-1575043694:418427..418470Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:418781..418829TCONS_00060649-exon-scaffold_348-1491911889:418781..418829Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:418781..418829TCONS_00060649-exon-scaffold_348-1510915933:418781..418829Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:418781..418829TCONS_00060649-exon-scaffold_348-1575043694:418781..418829Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:420563..420643TCONS_00060649-exon-scaffold_348-1491911889:420563..420643Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:420563..420643TCONS_00060649-exon-scaffold_348-1510915933:420563..420643Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:420563..420643TCONS_00060649-exon-scaffold_348-1575043694:420563..420643Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:420843..420902TCONS_00060649-exon-scaffold_348-1491911889:420843..420902Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:420843..420902TCONS_00060649-exon-scaffold_348-1510915933:420843..420902Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:420843..420902TCONS_00060649-exon-scaffold_348-1575043694:420843..420902Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1491911889:421310..421900TCONS_00060649-exon-scaffold_348-1491911889:421310..421900Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1510915933:421310..421900TCONS_00060649-exon-scaffold_348-1510915933:421310..421900Clytia hemisphaericaexon
TCONS_00060649-exon-scaffold_348-1575043694:421310..421900TCONS_00060649-exon-scaffold_348-1575043694:421310..421900Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_348supercontigscaffold_348:410540..421900 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00060649 vs. Swiss-Prot (Human)
Match: DIC (Mitochondrial dicarboxylate carrier OS=Homo sapiens GN=SLC25A10 PE=1 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 5.497e-97
Identity = 139/263 (52.85%), Postives = 185/263 (70.34%), Query Frame = 3 
Query:    3 THPLDLLKVHLQQAKTTNRGLISTALKVIKNDGFLGLYGGISASILRQLTYNTTRFALYERLSAKLLENRNDALPFYQKLAIGCVSGFVAGVVGNPADMVLTRMQNDVRLPKDMRRNYKHGFDGIYRVVVEERFHTLFAGVTMTATRGLFMTLGQVATYDQTKQILIMTGYFKDNVPTHVLGSFFAGTIATSITQPFDVIKTRMMNAKPGEYQGIYHCAKDISKDGIFKGLYRGFVPRWIRLGPHTILTWVFLEQLRKAFPLK 791
            THPLDLLKVHLQ  +     +   AL+V++ DG L LY G+SAS+ RQ+TY+ TRFA+YE +  ++ +     LPF++K+ +G VSG   G VG PAD+V  RMQNDV+LP+  RRNY H  DG+YRV  EE    LF+G TM ++RG  +T+GQ++ YDQ KQ+++ TGY  DN+ TH + SF AG  AT + QP DV+KTR+MN+K GEYQG++HCA + +K G     Y+G VP  IRL PHT+LT+VFLEQLRK F +K
Sbjct:   24 THPLDLLKVHLQTQQEVKLRMTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSK-GEYQGVFHCAVETAKLGPL-AFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIK 284
The following BLAST results are available for this feature:
BLAST of TCONS_00060649 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIC5.497e-9752.85Mitochondrial dicarboxylate carrier OS=Homo sapien... [more]
back to top