TCONS_00060861 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060861
Unique NameTCONS_00060861
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1817

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060861 ID=TCONS_00060861|Name=TCONS_00060861|organism=Clytia hemisphaerica|type=transcript|length=1817bp
GAATTTGTTGGCGTTCAAATGTATGGCAAAGGAATTTTATCGATGTGTGA
AGTTGTTGTTGCTTCAAGATTAGGTGCGATGGCTGATTGGTGCCAAATTG
AAAACGGTGGCTGTGAACATCTTTGTCACAACAAATGTGGAAGAGAGACA
TCGTGTAGCTGTCTACCTGGATATAGTCTGGCATATGATGGCAAGTCCTG
TATTGacATCAATGAATGTTTATCGAACAATGGAGGTTGCAGAGTTGACA
AACAAGCTCGTTGCATTAACTACCCTGGTGGATTCTACTGTGGTTGCAAT
AGAGGATATATTCTTGCTGATAACAGTTTGACTGAGTGTGTTGATTTGAA
CGAGTGCGGATCAGGGAATGGAGGTTGTGAACAGATGTGTAATAACACCC
TTGGTGGATACATGTGCACGTGTAGAAAGGGCTTTGAACGAAAACCAAAC
AATCCTTATGGATGCCAAGATATCAATGAATGTTTGACTAATAATGGTGG
ATGTGATCACAATTGCCATGACTACCAAGGTGGCCATTATTGTTCGTGTA
AGGTTGGATTCCGTCTCCGAGAAGATAGCAAATCATGCGAAGAGCTCTAT
TGTCCAGTGCTTGAAGCTCCATATCATGGTCACGTGACACCAGCCACGTG
TTCaaagaaatatgaaaacatTGCAGTGGGGAGCACGTGTAAATTCGAAT
GTTCTAAAGGATTCGAATTAAAGACCAATGTGGGTGCACAAACATTGTCG
TGTCGCATTGACGGTACATGGGATCATGGTACACCAAATTGCCACCCTGT
CAAATGTCCCACCCTTCAGCGTCCGATCAACGGAGGTCTGGTACCGGCCC
GTTGTCATGACGATCAGCGTGGTTACAACGAGTTCGGTCAGCGGTGTGTA
GCGTATTGTCGCCATGGATACCGGTTGAGAGGCGCACCAACGAAATATTG
TCAAGCTGATAAGTCATGGTCAAACAATAACGGAGCTCTAGAATGTGTCA
AGATTGTCGAGCCACCGTACATAAATTGCCCAACAGACGTGCAAGCTGTA
CTCCCTGATAACAGCAACTCAATGAGCCTGGCCTCCAAATTCCGACTTCC
GCAAACAAACGTCAACTCATCATCAATCGTTACGTATCCCGGTAATGTGG
GACCGGATTACAAATTCCGATTCGGGAAAACTTTGGTCTCGTATGTCGCT
AATCATGTTACTGGGGAGACTGTTTCTTGCTCGTATTTTGTTGATATTAA
AGATAAAACACCACCAACTGTACAGAACTGTCCAACCGACATCAACGTTC
AGACAACATCCAAACTAAGTACCATCATAACATGGACAGAACCAAAATTC
ACCGATAATGTTGGTGTTCGGAGAATCATGAGACCGCAACGCAAACCCGG
ACAAGCCTGGTATCCTGGTGAAGAAATGACTATTTTGTATTTGGCAACTG
ATGTTGCTGGCAATCAGGCTAGATGTAGCTTCAGAGTGACTGTTAAAACT
AAATACTGTCCCGAATTGACATCCACCAACCCGGATCACATGATCACACC
GTATTCACCCCGACAATCATACGGTGTACAATGTAAAGCAGGGAAGGCGT
TATTCGGTAACTTCAACCCGATGAGTAACATGGTGATGTGTGTTGGTGGA
CGGTATCGAATCGAAGCAACTTTCATTGATCACTCACTACCTGATTGTGT
CTCTTCATACAACTTGAGACAAGCTACAGATCAATGTTCTGAAGGGTACG
AAAGGAAAATCTTTGACGATTTCTGGATGGGTAAAACTTACTTCTGTGCC
ATGTGTCCATCTGGAAC
Run BLAST on NCBI

transcript from alignment at scaffold_349:488520..502639-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060861 ID=TCONS_00060861|Name=TCONS_00060861|organism=Clytia hemisphaerica|type=transcript|length=14120bp|location=Sequence derived from alignment at scaffold_349:488520..502639- (Clytia hemisphaerica)
GAATTTGTTGGCGTTCAAATGTATGGCAAAGGAATTTTATCGATGTGTGA
AGTTGTTGTTGCTTCAAGATTAGGTAAAAGTTTTAAGTATTTAGACTTAT
GAATGAGTTTTTTGTGACCCCCATCCCTGGGGAATTTGTTGGCGTTCAAA
TGTATGGCAAAGGAATTTTATCGATGTGTGAAGTTGTTGTTGCTTCAAGA
TTAGGTAAAAGTTTTAAGTATTTAGACTTATGAATGAGTTTTTTGTGACA
CCCATCCCTTGACAATTTGTTGGCGTTGGCGTTCTAACGCATGGCATAGG
AATATGAAAGATGTTTTTTCGATGCTATATTCTGTTGACAGTTTGTTGGG
TTTTAATGTGTATACGATGGGGGAACGGATTTGATATTTTTTGTCGGTGT
TTCGGTGTGAATTTTTGGATCTTACACTACTGGTGTTGTTTGTGACGATG
TTTCAGTGTTTACGACCTTCGTAGGCCATTAATATTTTTTATTAGTGCGT
GAGTTTTGTTTAGATCGGCTCTGCCATCAGCATATTAGAGGTTTTCAGTG
ACCGGTCACTTCATTAACTTTTATACAGTCAATTCTCTCTTATTCGAATC
TTTCTGTAATTCGAACTAAATAAAGCATTTATCTTCTCAGCTAGAAAGTA
GTTTAAAAACACTCCATAATTTGAATCTTTCTCTAATTCGAAAAAAATAT
GTTAGCCCCTTGAAGATTGAATTGTAGAAGAGCAAATGTATCATAATTTC
ATATTAAAGGTGCGATGGCTGATTGGTGCCAAATTGAAAACGGTGGCTGT
GAACATCTTTGTCACAACAAATGTGGAAGAGAGACATCGTGTAGCTGTCT
ACCTGGATATAGTCTGGCATATGATGGCAAGTCCTGTATTGGTAAGTTAT
CAGTTCCTTAATCGGGTCCTTAAACGGGTCCTTAATCGGGAAATCGGGTT
TTTGTTATAGCAGGTTATAGAGGTTTTTCATGTTTTTTAAGTTCCGTCAT
TGGTAGCCTATACTAGACGTCACCCGCATTTTTTCTACGCAATTAACGTC
TATTCCACTTTGCTACTCTTTGACGTCATTTTTAATTTTCGAAGTCCCTG
CAGTAGCTAAAAAATGAAATTTGCGTCAAAACACTTGAAAGGCTTCCATT
TTTCAAAAATCGTCAAAGTGGAACTCACTAGGAAACGGGATGAAAAATCC
CGATTTTTGGAGAGGTGCTCGCTATCATTATGAAAGCAAACGTTCGATTT
GCATAAGGGGTCACATCTACAGATTCGAACGTTTGCTTTCATAATGGCGG
GAATTACGTAACTTAACAAAACACAAACAACCTCCAAGCAAACTTTCGAA
TTGCGTAAGGGATCACCTCTACAAATTCGAACGTTTGCTTTCATAATGGC
GGGAATTACGTAACTTAACAAAACACAAACAACCTCCAAGCAAACTTTCG
AATTGCGTAAGGGATCACCTCTACAAATTCGAACGTTTGCTTTCATAATG
GCGGAATTTAGGTAACTTAAGGGCTCTGACCATAGTCAGAAAATTGATTT
TAGTATCTGAAACATAAAAGTTATGTTTTAGATTCTTTAACACTTTTAAC
AAAGAATTGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTCAGAGCCCTTAACAAAACACAAACATTCGAT
TTGCGTAAGGGGATCACCTTTACAAATTCGAACGTTTGCTTCCATAATGG
CGGGAATTACGTAACTTAACAAAACACAAACAACCTCCAAGCAAACTTTC
GAATTGCGTAAGGGATCACCTCTACAAATTCGAACGTTTGCTTTCATAAT
GGCGGAAATTAGGTAACTTAACCAAACATGAAAAACCTCTATAGAGGTTT
CTTTTGTTGAAAATACATATACAAATACATACCCTACAATTGACTGACAC
ATCATTTTCAAAATTTATTTATTTTGCTTTCCCAGCATAGGGTGCATCCA
TATAATACGTACGCAAAATTTATCCAAATATTGGATTACCCCTTCCCCCC
TTGTACGCAGAGAACAATAGAAATGACGTCATTTAGACAATAGACGTACA
CTTTTGCGAAGTCCCCTTCTCTCCCCTTCACTGCGTACGTACTATTATGT
GGATGGCCCCTAGAGGCGCGCCTCTTTTCTATATCATAAAGCAATCTATT
ATCAAAAACAGTTTGTCCCAAAAAAGCGGACAAATATTTTTATTTTAGAA
AAGTTTCCAAGCTGCACACAACGTTTGTTCAACGTTCATCTAACGTTATA
TGGATGTTGTGAACGTTAGATAGACGTTGAAACAACGTTTTGTGTCAGCT
GGGTTTTTTTTTGTACTTACCTGAATCCGATAAATTAACCTTTAAATTCG
TTCATTTTTAACTTTCGCTTTCGTTTTCAGACATCAATGAATGTTTATCG
AACAATGGAGGTTGCAGAGTTGACAAACAAGCTCGTTGCATTAACTACCC
TGGTGGATTCTACTGTGGTTGCAATAGAGGATATATTCTTGCTGATAACA
GTTTGACTGAGTGTGTTGGTAAGTTATCGGGAAAATTGAGTTTCCTTTTT
CGGGATGCAGATCGTTTATCGGGGAACCATTCGGTAGAAACAAGCTCGTT
GCATTAACTACCCTGGTGGTTCTTACTGTGGTTGCAATAGATGATATATT
CTTGCTGATAGCAGTTTGACTGAGTGTGTTGGTAAGTTATCGGGGAAATC
GGGTTACTTTCTTCGGGATACAAATGGTTGATCGGGGAACCATTCGATAG
AACAAGCTCATTGCAATAGAGGATATATTCTTGCTGATAACAGTTTGACG
GAGTGTATTGGTAAGTTATCGGGGAAATTGGGTTACTTTTTTCGGGAATC
AAATGGTTGATCGGGGAACCATTCCATAGAAACAAGTTTGTTGCATTAAC
TACCCTGGTGGATTCTACTGTGGTTGCAATAGAGGATATATTCTTGCTGA
TAACAGTTTGACTGAGTGTGTCGGTAAGTTATCGGGAAAATCGGGTTACT
TTTTTCGGGATACAAATGGTTGATCGGGAAACAATACGGGACAAACAAAC
TCATTGCATAACAATCCCAGTGGATTCTACTGTGGTTGTAATAGAGGATA
TATTCTTGCTGATAACAGTTTGACTGAGTGTGTCGGTAAGTTATCGGGAA
TGTTTTTCATGTTGGCATGTTAAGTTACGTAACTTCCGCCATCATGGAAG
CAAACGTTCGAATATGTAGAGGTGATCTCTTACACAAATGGAACGTTTGC
TTCCATAATGGCTGAAATTATGTAACTTAACAAAAAATAAAAAAACTCTA
TATATGGATGATCGTATTAACTATTCATATGGGTCACACCTGTGAATATA
GCAGAAGATATATTCTCGATGGTGACACTTTAATAAAAATATACTCTTAG
GCTCCAAATAAACGGACTCCCCCCCGTTTATTAAAATCTCGAAAATTTTC
CAACCCGGGGGGGGGGGGGGTTCGTTTATTCGACCCCCTGTTTATTTGGA
AACTTAGAGTAATAAAGTTGATATAATGTTGATAGTAAATTAATAATATA
ATAATGATAACAATGATATCTTCAAGTGACATATGGTAAGTTGCACACGT
CGTACGTAAGCACCAGAAGTAATAAGGCTCCATTTACATTTTACAGATTT
GAACGAGTGCGGATCAGGGAATGGAGGTTGTGAACAGATGTGTAATAACA
CCCTTGGTGGATACATGTGCACGTGTAGAAAGGGCTTTGAACGAAAACCA
AACAATCCTTATGGATGCCAAGGTAAACCTTGTACCTTATCGGGGAAAAA
ATGTCGGGAGGAAAGTGACGAAATATTTCCCCGACGAAATATTTCCCCGA
CATTTTATCACCTGACTAAAACTTGTTTACCTCAAATTTTATACCGCAAC
CAAAATTCAAATCTAATTTTCTTACACCTTTATTTACCGAAATTAGTGCT
TTAAACGTCGAATTACAAGATCTATTTTCGAGCTAGTGAAAAAAACCAAT
TCTTTTGCACAGTTTAGTCGAGGAAAAGTGACGAAAATGCCTCTAGGTGA
CGAAATTTTTCCCCGACGAAAAAAAAACCCAACTAAATAAAACTCCGACA
TTTTTTCCCCGATAAGGTATATTCTATGTTCTCAACTGGCACACAACGTC
GTTTGATATTGAGCTTCCAAAAGCGCAAAAACTGGACAAAACAGCTGTTT
CTGGCTGAAAACACTGTTTTTAAGGGCTACTGAATAGTCCTTTGATTACT
TTTTTTCTGACTTCAATTTTTTTCACACTTTCCTTTTTCAAGATATCAAT
GAATGTTTGACTAATAATGGTGGATGTGATCACAATTGCCATGACTACCA
AGGTGGCCATTATTGTTCGTGTAAGGTTGGATTCCGTCTCCGAGAAGATA
GCAAATCATGCGAAGGTAACATCCTAGCTGACATGCAACATCGTTTCAAC
GTTTATCTGATGTTCACAACGTCCATATAACGTTAGATGAACGTTGAAAC
AATCTTGTTTGTTTGTGGAGTCGTTTATATTTAATGCAATAATAATGGTG
TTGCGGAATCGTTGCGGAATAATATCAGTTTGTATATTATTTGTTCCGTT
CATCAGTGCCGTAGGAAGCATTTTCATATTGAGGGGGCTGAAGTTTAGTG
ACACCATGGTTTGGTCCGAGGCTGAGGGGAGGGGGGATTTTGAAAATTTG
AGCTCTAGATTGCTTGAAAATGCACCCAAAACAAAATACTTTCGAGAAAA
AACAAAATTAAAAAAGAAAAATTTGCATTTTGCAAAATAACCATTTTTGA
AAAAAATTATTGGGGGGGGGCTAGCCCCCCTTGCCTCCCAGCTGCTACGG
CACTGTTTATTGGTTTTGCTTAATATGTCTGTTATGTTTGAATTAGTTAT
CTAGCATACTTGTGACTACCTTGTATGCGCGCATACTTCTGTCTAAATTG
GAGTTCGTTCGTTCTTCCCCTTGTCATTTATTAACTGTTACAGTATGTGT
CCAATTTTTTAACATATGGCTTAGTTTTTGTGGGTTCATTTTTATAATGT
CATTAACTCTTACTGTTAACAATTTTTCACTTAGAATCGAATAGTTTCCT
TTCCCTCTGTCATATTATACCTTAAGGGAACTATTTTTTGCGGGAACTAA
TTTTTGCGGTTCGCAGTTCAAGATTTAATTTTTAATATTTGCGGGAACTT
AATTTTGCGGATTTCTGACTTGAAAAAAATTAGAGCCGTACTGTGAATCA
TTCGACCTTCGTTTTTTGCATATGAAAAATTTTGCGGGGACTTAATTTTA
CGGTTTAGGCCTAAATCCGCAAAAACCGCAAAATTTAGTTCACGCAAAAA
TTAGTTCCCTTAAGGTAATACCGAGTTTATGTATCGGAGGATATCGAGGG
CGACGGTAAGTGAAATCGATACAAAACAAAGTCAATAGTTGATGTACGGC
TCTATATTGCTTTTACTCACCTAAACAGACGACGGTATTTTGGTGTTTTT
ACCGTCGTCGGGCAAAGTGGACGTTGATTTTGGAGACATGTCAACTTTGC
TTTATACCGTCCCCCTCACTTTATCTCGATACATAAACTCGCTAATAACT
GATAAGCGTCCAATTTTATGTTTTGAAGTTGTCTTAAATTTGATAATTAA
GATAGTGTGCGATTACTGTATTTTCTAACATTTTATTCAATCATTTTCGC
GTTCAGAGCTCTATTGTCCAGTGCTTGAAGCTCCATATCATGGTCACGTG
ACACCAGCCACGTGTTCAAAGAAATATGAAAACATTGCAGTGGGGAGCAC
GTGTAAATTCGAATGTTCTAAAGGATTCGAATTAAAGACCAATGTGGGTG
CACAAACATTGTCGTGTCGCATTGACGGTACATGGGATCATGGTACACCA
AATTGCCACCGTAAGTATATGTTTTTAACCCCCTCTAAGCCAAACTTATT
ATTAAGGTCGTGATAGACTAAATGTCTAAAGTCCATTCGCTTGAAGCGTG
CACACTTTCTTGTTATTATGTTGAAACCAATCTCATGAAAATTGGTCTAA
TTACACTGGCTTGGTTTCTACACATTGTAGCAAAAATGAGTTCACACTCT
TGAGCGAATGGACTTCAATTTATATTATTTTTATATTGCCCCCTCAGTGA
CTAATTTTTCATCGTTAAAAAGAAATACAAACTTACTGAAGAATCCCAAT
AAGGACGAAATGCATGCACCTGCTCTGTCACCCAATCTCCTGAAAGAAGA
TGGATAGTTGGACAGAAATTATATGAATTTCTTCTTACATACATTGTTCA
CTCTCAAGTTATAAGGTTTAGAAATTCATCTAAAATTAGCTTTTCATTTT
TACCTACAGCTGTCAAATGTCCCACCCTTCAGCGTCCGATCAACGGAGGT
CTGGTACCGGCCCGTTGTCATGACGATCAGCGTGGTTACAACGAGTTCGG
TCAGCGGTGTGTAGCGTATTGTCGCCATGGATACCGGTTGAGAGGCGCAC
CAACGAAATATTGTCAAGCTGATAAGTCATGGTCAAACAATAACGGAGCT
CTAGAATGTGTCAAGAGTAAGTCGTTTCAACGTTCATTTAATGTCCACAA
CGTCCATATAACGTTAGATGAACGTTAAAACAACGTCGTGTGCCAGCTGG
GTTGTTTATAGCGGCCGTAGCATCCAGTTACGGTGCGCAAGGTCGTAGGT
TCAATCCCCTGGCCGAGTCATACCAAAGACTTCTTACTGAGCACAAAATA
GTGCTTGTTGCCTCTCTGCTTGATGCTCAGTAATTAAGGGAAGGGTCAAG
GGTAAGTGGAGAAATCCAGGGAGAACTAGTGGCGCCCTCACCTACCTTCT
GTTAGAAGGCCGTAGCATGAAGGTAGATCATCCAGCTACGGTGCGCAAGG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAA
ATATTGGATGTAATGGTAATCAATTCGCCGCGACAAAGCATACGTGTCTA
CGTAAAAAGTTTTCGCTTAAATTCAACGTTGTTTTTTAGTTGTCGAGCCA
CCGTACATAAATTGCCCAACAGACGTGCAAGCTGTACTCCCTGATAACAG
CAACTCAATGAGCCTGGCCTCCAAATTCCGACTTCCGCAAACAAACGTCA
ACTCATCATCAATCGTTACGTATCCCGGTAATGTGGGACCGGATTACAAA
TTCCGATTCGGGAAAACTTTGGTCTCGTATGTCGCTAATCATGTTACTGG
GGAGACTGTTTCTTGCTCGTATTTTGTTGATATTAAAGGTAAGAAGCGGG
AAAATCAAACTGCTTAATTTAAGTTAAGACATGAAATAGCACACATTTGT
GGAATGAATACAATATTTTAAATTTGGCGGGAACTTTATTTGGCAGACTC
TGGCATAATTCACCAAATCTGCCAAATTTTCTTAACTCAACAAATTTTGG
ATTTTTTCGTTTCCATCCTGAAATGGTTTGTTTCAACGATAAATTTCAAA
ATTTCAAGGTTGCAACTCTCCTTTCACTCTAAAAATTTGTTTGATGAGCT
TTTAAAAAGAGGCTCCCCTCTACTAAAATGAACTTATATCGGACTTTAAT
ACTTTCTTTCTCATTTTTATACTTAATAATATTACAAAGTATAGCAATGT
GCCCTCCCGGTTATTACCATAATGGCTTTATGGCAACTCCTGAACTTGGG
CACAGGATGTACGGTACTTAATGATATTACCAAAAATCAGGAAAAAAATG
AAAATGACAAATTTGTTGAGTTCCCCTTTAATGACACATAACACATAACA
TTTCTACAACAGATAAAACACCACCAACTGTACAGAACTGTCCAACCGAC
ATCAACGTTCAGACAACATCCAAACTAAGTACCATCATAACATGGACAGA
ACCAAAATTCACCGATAATGTTGGTGTTCGGAGAATCATGAGACCGCAAC
GCAAACCCGGACAAGCCTGGTATCCTGGTGAAGAAATGACTATTTTGTAT
TTGGCAACTGATGTTGCTGGCAATCAGGCTAGATGTAGCTTCAGAGTGAC
TGTTAAAAGTGAGTTTTCTGTTGTTTTCAGTATTCCCAGATGGCACACAA
CGTCAAAACAACGTCCATGTACCATTAATAACGTCCATATAACGTTATTT
GAACGTTAAAATAACGTTGTGTGCCAGCTGGGTTAAATACACGTCGCGGT
TTAAATTTTACCGTAACTTACTGAGCAGATCAGTATTAATTTTATCTGGC
ACCCAGATGCAGAAATTTTCATCCGACACGCTCAAGCTCTGAAGGTCGGG
AAAGTTTTCAACATCTGGAAGGTTTAGATGATGGAATTTTGCGAGACCGC
GTCAAGAATTTTGCAGCGGGAGGTCTGGTAACCCAGCCCTCGTTTTCGGG
GATTGGCGGGTCGAACCAAAATATTTTTAGCTTTACGGGAAAGGGCTATT
GAACCCGACTGAGGATGCGGCACATCAAAGGCCGACTATCATTCCTCTCC
AATGGGAGATTGGCCCGCCCCTTTAGAGCTTTAGCGTGGGCGGCCGCCAA
TCCACCATCGGAATATCGGATAAATAATAATTTGAAAGTTCGCGTTTTAT
TCTGAACTGGTTTTCTGATTTTTGAAAATCGAATGAATGTCCTATTCATG
ATATGCAACACTGGACACTGGAGAGTCTTCCAAGAATTTTCAAAAAGTTC
AACCCAATACGTCACTTTTTCTATTGTTTAAGTGATGTACTAGTATTGGG
TTGAACTTTTTGAAATTTCTCAGAAGACTCTCCAGTGGTGCATATCATGA
ATTTATTTGGAAACGTTCCATGAAAACTCTGAAATCTGCCTCAAAAATAT
GTGAACATTTTACTTTTTCAACAATTTCTGTTCTTTTATTTCCTACGCAT
GTTATGTTGGATAGTTGGAAAGATAATCTTGAGAAACATAATTTAAAAGA
TTGAGGACATTTATAAAAGTCGAAAATTGAAGAAAAAAATAAAATATGAA
AAAAGGAGAAGAAGAATTATTCCTCATTTTTTTCATCTTCATTTTTTTTG
AATTTTATAACAGTCTTTCAATCCTCTTGATACTTCTTTGATACTCTTCT
CTAAAATATCTTTCCAACAGTGTATAACAATTTAACATAGCATTAAGTGG
GTGCTGAGTGAGAGATTGTTAAAAAAATAAAATGTCCACATACGTTTAAG
ACAGATTTTTACAATTATTTTCAGCTAAATACTGTCCCGAATTGACATCC
ACCAACCCGGATCACATGATCACACCGTATTCACCCCGACAATCATACGG
TGTACAATGTAAAGCAGGGAAGGCGTTATTCGGTAACTTCAACCCGATGA
GTAACATGGTGATGTGTGTTGGTGGACGGTATCGAATCGAAGCAACTTTC
ATTGATCACTCACTACCTGATTGTGTCTGTAAGTACAGTACAGCTGCCTG
TCCACTGGAAAATAAATTGCCAAAATAGTTCTATTTATACTGAGACGATT
AATTTGTCTGAGACGAGCAATTTAGAAAATGAGCATTATGGAGGAGTGTA
CTTTCCATTCATGTTTCAATAAATAGGATCTCCTCCACAGATCACATTTT
ACAAACTACTCGTCTCAGACGATTTTTCCCACACAAGAGGAATGAATGAA
TTTTTATCCACACAAATTTTTAGACTTATCAGAAATGCTGATTGAAGTTT
TCCGACGCGCCGCTTAAAATAAGCAAAAATGGTGATTCCTTTTTAGCATT
AGCTAAACTTATATTTTGGTGTGACCGCGCTCTTTGTCGTTTAAAAAGAA
CAATAGATTTTTAATTACGAACTTATTTTTATTCAGTGGACACCCAGCTT
ACATGTTTATACTTCAATTCATGATATTCATGACGTAATGTTTTTTACGG
AAGTGTAATAAAGTCTAGGCGTTGCCACCAGTTTTATTGTTTAATCTTAG
ACCATGTTCAGACGTTACGGCTCCGTTCCGTTCCGAAATGAAACGGTTCC
GAAACAAGTGTGAACAAACTTCGAAACGTCAAAAAAAAGAAGACGTTACA
AAGCAAAACAGATTGAAACGGTTTCGCTCCACTTTTTTCATCGGATTGAG
ACTGCTCCGTTTTCTTGCTCCGAAACGTTCCGAAACCAAAATGAACGCAC
TCGACCCGTAACTAAAATTATATCGGAGCAAAACGGAACAAAGCATGGTC
TTAATAAGTTGGAGTCTATCGACCCAGTAGTATTCATGTTGAAATTGAAT
CACAATATTGGGCTTTCCCAGAAAAGAATTTACCCCCACTGTTGAGGATA
TCAAACCCCCTGGATATCCTCTTTTATAAAGATGCTTACCCCTGGATATC
GTATTTTTTACTTGAAAAGACACTTTACTCCCCGGATGTCCGGTCCCTTG
TAGATATTTAACCCCCTGGATATCCACTTTTGAACAAAAATCGTTAACCC
CCCTGGATATCTGATATCCTCAACAGAGGGGACAGGGACTTTTTCTGGAA
AAGTCCATTTACGTTTGACTACGTTTTGAGAGATTCTTCTCCCATCATCG
GGTTTCATTTATTGTTTACATCCAACATGAGTGGTAAACGTCCGGTCTAT
TTTAGGTGCTTCCGTCTAAAACATTACGTCATGAATATCATCAATAGCTA
ACAAAATCTTAGATCAAAAGCATCACTATTCCTTAACAAAAACTTATCAT
TCAGAACAAACCAAAAATAGATTTAACTCACTACTCAAGATTCTCCCTGT
ATTTTAAATGCAACGAGCATGTAACTTTTGTTTGCTTAAGGTCGAGTTAC
CATATATTATGGACACCTTTTCAAGATATTGCCGGCACTCAGCAATATAT
CATCAATATATTGCCTGACAATATATTGTGTAGTGTATGGAGTCCTTAAG
ATAGATAATCATGCTTTCACAGTGAACTTTATTCCCCTCACATTGGGATC
TTCCAGAAAATATTTGAATATGGAAGGTGGAGGACATTTTTTGGAAATTT
ATCTCCCTGACATTGTGAATTTTGACCCCCCCGGACAGAACAGATCTCAC
CCCGGAAAAGCATCAATAGACCCCCGCCCGGACATTAATAATTACCCTTA
AACAGAGCAAATTTGCCCCCAAAACAAGGCAGATTTTTCACTACCCCCAA
ACAAAGTATCCAATATATTCTCCACCCCCCCCCCATGTACAAAAATTTTT
CTGAAAGAGCCTATTCAATTTTTCTTATAGCTTCATACAACTTGAGACAA
GCTACAGATCAATGTTCTGAAGGGTACGAAAGGAAAATCTTTGACGATTT
CTGGATGGGTAAAACTTACTTCTGTGGTAAGTCTACGTATTTTAAGATAA
TTACCGTAAGTTGGTCTAATGCCGACATCCCTCATCTAATCTCGACACCC
TTTTTAGAGATAGGAATAATGGGAAGGTCAGAATCACTTATAGACAAACG
ATTTTTTCCTCTCTTATCGCTAAGTAAAGAAAAATAGTTTACATCAGCAA
TTCCGACATTCATATATCTCTAAAGAAGGGTGTCGAAATTACCTTAAGGG
AAGAAATTTTCACGGGAACGAAATTTCGCGGTTTTCGCGGATTTTGCCTA
AAACCGCGAAATTAAGTTCCCGCGAAATTTTACAAAATCGTCAATCCGCG
AAATTAAATTCCCGCGAAATTTAATTTATTTCACGCATTCCCCCAAATTC
TTACTATTTCAAGCCTTAAAACAGGTTTTTTGCTCATTTAATAACGTTTT
TGGTCAAAAATATCTTGCAACCGCGAAATTAAATTCCCGCGAATTTTTTG
AAAATTGATGAACCGCGAAATTAAGTTCCCGCGAAAAAATATAATTTGAC
CAACCGCGAAATTTAATTCCCACGAAAATTTCTTCCCTTAAGGTAGAAGA
AGGATGTTTACGGGGCAATAAAGAAATTAAAAAAAATTATTTTCAAAATT
CTCATAGTGGGAAAAACTTACGCGAAAATTTTGAATTTCTGTCGTGGTTT
TTTCGTCCCGCAAAACAGAGACTGCTCAAACCCCGCTTTGAAGAAAATCT
CTTCGTTATGTTTCGAATTTTTGCACACTACCATATCATAATTTTGAGAG
AAGTGCTGTTTGCTACCCCGTCTTTGCAAAATTTGGAATCACGTTAGAAA
AATTAGATTTAATCCTGATCCACGAAACTACGCGAAAAATCAGGGAACTC
CTCATCCGCAAAATTTAATCCCCGCGAAAGTTTATCCCATTAAAGTCTTA
GCCATGTGTCCATCTGGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038217XLOC_038217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060861-exon-scaffold_349-1575043694:502567..502639TCONS_00060861-exon-scaffold_349-1575043694:502567..502639Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:501749..501880TCONS_00060861-exon-scaffold_349-1575043694:501749..501880Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:499522..499659TCONS_00060861-exon-scaffold_349-1575043694:499522..499659Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:498268..498393TCONS_00060861-exon-scaffold_349-1575043694:498268..498393Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:497625..497747TCONS_00060861-exon-scaffold_349-1575043694:497625..497747Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:496130..496333TCONS_00060861-exon-scaffold_349-1575043694:496130..496333Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:495474..495680TCONS_00060861-exon-scaffold_349-1575043694:495474..495680Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:493502..493750TCONS_00060861-exon-scaffold_349-1575043694:493502..493750Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:492732..492977TCONS_00060861-exon-scaffold_349-1575043694:492732..492977Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:491362..491565TCONS_00060861-exon-scaffold_349-1575043694:491362..491565Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:489464..489559TCONS_00060861-exon-scaffold_349-1575043694:489464..489559Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1575043694:488520..488538TCONS_00060861-exon-scaffold_349-1575043694:488520..488538Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:502567..502639TCONS_00060861-exon-scaffold_349-1510915933:502567..502639Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:501749..501880TCONS_00060861-exon-scaffold_349-1510915933:501749..501880Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:499522..499659TCONS_00060861-exon-scaffold_349-1510915933:499522..499659Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:498268..498393TCONS_00060861-exon-scaffold_349-1510915933:498268..498393Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:497625..497747TCONS_00060861-exon-scaffold_349-1510915933:497625..497747Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:496130..496333TCONS_00060861-exon-scaffold_349-1510915933:496130..496333Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:495474..495680TCONS_00060861-exon-scaffold_349-1510915933:495474..495680Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:493502..493750TCONS_00060861-exon-scaffold_349-1510915933:493502..493750Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:492732..492977TCONS_00060861-exon-scaffold_349-1510915933:492732..492977Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:491362..491565TCONS_00060861-exon-scaffold_349-1510915933:491362..491565Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:489464..489559TCONS_00060861-exon-scaffold_349-1510915933:489464..489559Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1510915933:488520..488538TCONS_00060861-exon-scaffold_349-1510915933:488520..488538Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:502567..502639TCONS_00060861-exon-scaffold_349-1491911889:502567..502639Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:501749..501880TCONS_00060861-exon-scaffold_349-1491911889:501749..501880Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:499522..499659TCONS_00060861-exon-scaffold_349-1491911889:499522..499659Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:498268..498393TCONS_00060861-exon-scaffold_349-1491911889:498268..498393Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:497625..497747TCONS_00060861-exon-scaffold_349-1491911889:497625..497747Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:496130..496333TCONS_00060861-exon-scaffold_349-1491911889:496130..496333Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:495474..495680TCONS_00060861-exon-scaffold_349-1491911889:495474..495680Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:493502..493750TCONS_00060861-exon-scaffold_349-1491911889:493502..493750Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:492732..492977TCONS_00060861-exon-scaffold_349-1491911889:492732..492977Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:491362..491565TCONS_00060861-exon-scaffold_349-1491911889:491362..491565Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:489464..489559TCONS_00060861-exon-scaffold_349-1491911889:489464..489559Clytia hemisphaericaexon
TCONS_00060861-exon-scaffold_349-1491911889:488520..488538TCONS_00060861-exon-scaffold_349-1491911889:488520..488538Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_349supercontigscaffold_349:488520..502639 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0877563	0.282594	0.163783	0.095975	0.267233	0.0511766	0.179563	0.201605	0.10182	0.160929	0.649213	0.297579	2.53059	0	0.116109	1.67586	0.296023	0.367503	4.50758	2.21867	0.993654	1.70784	1.45976	4.41164	2.80114	4.07698	0.49696	0	0.00587378	0.252605
Blast
[Close]
BLAST of TCONS_00060861 vs. Swiss-Prot (Human)
Match: SVEP1 (Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 1.486e-35
Identity = 110/399 (27.57%), Postives = 160/399 (40.10%), Query Frame = 1 
Query:  415 CTCRKGFE--------------RKPNNPYGCQDINECLTN-NGGCDHNCH---DYQGGHYCSCKVGFRLREDSKSCEELYCPVLEAPYHGHVTPATCSKKYENIAVGSTCKFECSKGFELKTNVGAQTLSCRIDGTWDHGTPNCHPVKCPTLQRPINGGLVPARCHDDQRGYNEFGQRCVAYCRHGYRLRGAPTKY-CQADKSWSNNNGALECVKIVEPPYINCPTDVQAVLPDNSNSMSLASKFRLPQTNVNSSSIVTYPGNVGPDYKFRFGKTLVSYVANHVTGETVSCSYFVDIKDKTPPTVQNCPTDINVQTTSKLSTIITWTEPKFTDNVGVRRIMRPQRKPGQAWYPGEEMTILYLATDVAGNQARCSFRVTVKTKYCP-ELTSTNPDHMITP 1551
            C CR+G+               + P N Y  Q  N C  + N  C   CH   D  G     C            C    CP L  P HGH++ +T    Y+     +TC   C +G+ L+   G+  L+C+ +  WD   P C    C T Q P +  + P  C        +FG  C   CR G+ L G      C     W+    A  C K VE P INCP D++A   +  +S ++  +    + N      V       P Y F  G   + Y A  ++G   SC + + + D  PP +  C +   VQ + K+    +W EP+F+DN G   ++      G   +P  E  + Y ATD +GN   C   + +K   C    T  N D + TP
Sbjct:  360 CVCREGYRASGQTCELVHCPALKPPENGYFIQ--NTCNNHFNAACGVRCHPGFDLVGSSIILCLPNGLWSGSESYCRVRTCPHLRQPKHGHISCSTREMLYK-----TTCLVACDEGYRLE---GSDKLTCQGNSQWDGPEPRCVERHCSTFQMPKDVIISPHNCGKQPA---KFGTICYVSCRQGFILSGVKEMLRCTTSGKWNVGVQAAVC-KDVEAPQINCPKDIEAKTLEQQDSANVTWQIPTAKDNSGEKVSVHVHPAFTPPYLFPIGDVAIVYTATDLSGNQASCIFHIKVIDAEPPVIDWCRSPPPVQVSEKVHA-ASWDEPQFSDNSGAELVITRSHTQGDL-FPQGETIVQYTATDPSGNNRTCDIHIVIKGSPCEIPFTPVNGDFICTP 742
The following BLAST results are available for this feature:
BLAST of TCONS_00060861 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SVEP11.486e-3527.57Sushi, von Willebrand factor type A, EGF and pentr... [more]
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