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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060970 ID=TCONS_00060970|Name=TCONS_00060970|organism=Clytia hemisphaerica|type=transcript|length=1468bp
GTACAGTGATATTCAGTCAGGTAAAATCTGTCTAGTAGGAATGGAAGATG
AGCTGGGTGTTGTAGACACTGTGGACAACTCAAGAGCAAGGGCCAACAGT
GACAGgaGGACATGTTGGGTTTGCTTTGGAACAGACGAGGATGACCCAGG
AGCGAAATGGATCAATCCATGCAGGTGTCGAGGTACCACCAAGTGGGTAC
ATGATACTTGCTTACAAAGGTGGTTTGATGAAAAACAACATGGAAATCCA
GCAACTCAAGTCTTTTGTCCACAATGTAATACGGCATACACCATTTCCTA
CCCTCCACTCAGTCCACTTCTGGTATTGATTGACTATGGAGAGAAAGCAG
CCAACCGAGTGGCACCTGTAGCAGCGGCTGGAGCAGTAGTTGGTTCACTT
TATTGGTCTGCTGTGACTTTTGGTGCTGTTACAGTAATGCAAATACTTGG
ACATAAGGAAGGACTGCAAGTTATGGAGGGTGCAGATCCTCTATTCTTGC
TTGTTGCTTTACCTACTATACCCCTGGGGTTGATATTAGGAAAAATGATA
CGCTGGGAGGATAAAGTTTTACACTTGTGGAGAGAATATTCTCCCAAATG
GGAATTCCTGAATAAAATATTTGGTGGAGGAGAAGAGAATAATGGGGCAA
TACGACGACAGCCCCTTGAGAATGATAATCAAATAGATTTTGTGAACTCG
ACACGTGTTTTGTGTGGTGCTTTGATGTTACCGACTTTTGCCACCGCTGT
TGGCAACTACCTTTTCAAAAGAGTTCAATCACCATTGAAACGAACTTTCA
TGGGTGGAGTGTCGTTTATCTTTGTGAAAGGAATGATCAAGATCTACTAC
AGGCAACATCAATACGTTCGTTTGGCCAAGCGCAAAATCGAGGATTTCCA
AGGGTCGACCAGCGTCTAAAACTTGTAAGCAACAGTACACAGATAGTTAT
AAGAAGCATTGTATTGAGAACTGGTAGGTGATTTTCATGAGCCTGGATTT
TGTGAGATTTGTATACAAAGACTACAAACATCATATATCCatttcgaaaa
aagaaaaaaaaaacttactgtCATAAGATATTTGATTGGTCATAATTatc
tttaaaaaggtttatttgTAAATAGAGTACTAGAATTTGAGCCAGTAAGG
TCCCATctccaaaaaatgtttatatgattatttgttttttttgctgaatt
ttgcaATACACAAACCTAGTGAACCTCTACAAATAGACAAGAGACCTGAG
AAACTCTTTCACCCTCAAATTTCGGAAAGCTTTTCGAAATTTCACATATC
CTCAAAGACAAAACCATTATCAAATTTGccgaaaatatttacaaaaagat
acacttttagattttttataaaatgaaaacaaccgAAAGTATTTTACTAt
ctaaaagaaaagttttgtagATAATCTAATTTTTGGGAGCGATAGCCCCT
Gatacggggggggggggg Run BLAST on NCBI protein sequence of TCONS_00060970-protein >TCONS_00060970-protein ID=TCONS_00060970-protein|Name=TCONS_00060970-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
YSDIQSGKICLVGMEDELGVVDTVDNSRARANSDRRTCWVCFGTDEDDPG
AKWINPCRCRGTTKWVHDTCLQRWFDEKQHGNPATQVFCPQCNTAYTISY
PPLSPLLVLIDYGEKAANRVAPVAAAGAVVGSLYWSAVTFGAVTVMQILG
HKEGLQVMEGADPLFLLVALPTIPLGLILGKMIRWEDKVLHLWREYSPKW
EFLNKIFGGGEENNGAIRRQPLENDNQIDFVNSTRVLCGALMLPTFATAV
GNYLFKRVQSPLKRTFMGGVSFIFVKGMIKIYYRQHQYVRLAKRKIEDFQ
GSTSV Run BLAST on NCBI transcript from alignment at scaffold_350:125217..131631- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060970 ID=TCONS_00060970|Name=TCONS_00060970|organism=Clytia hemisphaerica|type=transcript|length=6415bp|location=Sequence derived from alignment at scaffold_350:125217..131631- (Clytia hemisphaerica)
GTACAGTGATATTCAGTCAGGTTTGTATCGTTGATTTATTTTACACTTTT
AATACTTTTTAATTACTTTTACTATACTAATGAATCTCCAATGTTAACAG
CTCAAGTAACTGCAATGTTGTGTGATTGTTAGATGCACTGGAGAAAGGGA
CACACAACAACAACAAACAGACAGACAGGAAATCATGTTTGGGCCAAAAT
GGCAAAACATGATGGGCAAACTTCTGTTCTGATGTTTGGGTCACTAAAAT
TTGTATTTTAGCTCTTAAAACCTGGTGATCAAACACTTAGAACCCAGACC
GCTAACTACACCAAGTTTATCAATCATACTTTCTGTCCTTTTTAACTTTT
TCGTTTTCATTCAAAATGACTGGACGCCGATTGGAGAATTAGAGAACGCC
CGCTGCCTAACCACCTATCGCCCGATGGTAAATAGACCTTTTTTCAAATA
GGACGTCCTGTTGAATAATTATGTAGTCCAGCCATAAAAACAATGATAGG
GCCATCATGCATAATTACTGTATCATGCATATTGTAAATAATTATGCATG
GTTTTATCATTGTTTTTCTACTGGACTACATAATTATTCAACAGGGTGGC
CTCTTTGAAAAAAGGTCTATAACAAGTGTGTAACTTGCAGCGCGCGAGTG
AGGTTAAACGCTCCATCTTTTGCCACTAATTTGTTTTTCTTCGTTCCAGT
ATCCAGACCCGTGTGTGTTGTTCCACTACAAATTTTTTCATATTTTGCTT
TAAAAGCCTACTCTGTGAGAAAGAGAAATCGTAGGTTTTTTAATACGCTG
TTCATTAACTCAAATCAAATGACTTTGGAGGTTTGGTGAAATGAAAGCCA
AATTGCCGTCCCATGTTTTGTCAGATAGTCCCAAGCCAAGTTAGAGCAGT
TGGCGGTAATTTTTTTGCTACTATAGGGTACGATGTCATGTTGTTGGATA
TAATTAAAAACTCAAGCACAACAATCACATCATATATCACGATAACTCCA
CGTTTCAATGGATGCAAGGGAAACAACAACAATAACTAAAGTTTCACGCT
CTCCCATCCATCAAGTGATAACTTGTTGAACATAGGTCCATGGACCTTTG
GCTAGAGGTGATGTCATGTCGGACACATATTTTTGAAATTATAATGTTTT
TGCATAGAACATAGTGGGCAGAGGGGTATCAAGCCCCCCCCCTTAAAAAT
GGCACCCCCCCCTCTTTTAGCTCAACCCCCCTCTTAAAAATGAAAATTCC
TCAACCCCCCTCTTTTTATTCAACCCCCCTCTTTTTCCCAGGTTTAAGTT
CAACCCCCCTCTTTTTTTCGACCATTTGCGGTCGCAGCTGTCTTGCAAAG
GTTGAAAAAGCAACATACTCCATCAAGAGTTGTAGAAACAGAGTTTTTGC
TTCATTCAAATGAATGGAAATATAATAATTGTTGAGAAATCTAAAAATGA
ATGGAAAACACTCTTTTGCAAATTGCCAAATCTTCCAAGCCCCCCCTTAA
AAAATTAACCCCCCTCTTTTTGTCCAAGCCACCCCTTTTGTGAAGGTGGG
GGCTATGTTTCTAGAATTTAGCCGGGGGCTATTTTCCTTAGCCCCCCCTG
AAAAATGCTGGGGGCTGGACCCCTCTGCACACTATGAGTTTGTTGAACAA
CCATTAAAAGAGTGCTCAATACTCTTTGTAGAGCTAATTCATAAAGTTTT
TTTAAAATTATTTAGGTACCATCCATGGTCTATTCATATGGTCTATTCAT
ATATCACTGTTGAAAGTCTAAACAACTATTTTCTGAAATGTTATTTTAGG
GACCTTTCAAAAAGTATGTATGTTCAAATACAAGCAAAATTCCACCCTTC
TTCCTTGTGCGTTTGTGTACGCTTTTGCAACTACCTCCTCCTTCGTGTAT
GTACGCTTTTCCAAGGACCCCCCCCCTTCAAGGAAAATTTTTTGAAATGA
TAGCAAATTTTATTAGCAGCTCAACAAAAACCATAAAAAACAGGGAAGAA
AATCATAAGGTAGCCTAGATTCACCAGAAAAAGTTTCAGCCCATTGAAAA
CTGTGAATTTATATATAGTTTTTTGAGAGCTTATTAGGTGGTTTGAGTAT
ATAGTTTTTTTACCTAAATTTTTTTAATCCCTTTAAAATATGAACACTTA
GGTCCCAAAATTCATAGCGTCAGCCCCCCTGCTGGACCTATGTAATTGGG
GCGAGCTAAAATCTCATCACTTAACGTGGGGGCTAAAATAATTCAGCTTG
CTTCAATTACTCAAGTTGAAGCTCATGAATCTTAAAAATTTTTGTCTGCG
GCGCAATATTTTTATAGAAAGTGTGCAAAATATTTTATCTTAAACTTAGA
ACTGAACGCAATTTACATTGGAAAACCCTTTTTTACTGGATCAATTTTTT
GAAAGTGTCTAGGGTCAAAAGTCCTGGGGTCCCCGCCCCATAATTCTTTG
GGGGGGGGGACTTAAAACTCAGGGGGATCTAATTTTTGCCTAAGACCTAA
ACCCAGGCTGCCGCTATGAAAATTAGGGTTGCTCTGAAAGTTATCTCTGG
CCTTCTTCCTAATTTCAATTCATAATATTAGGGGCAGGAAGGAAAGAATT
TGCATTGCACATTATAAGTATTATCACTGATCAAGTCAAAAGTGGACTAA
GTGAACAAAATTTTCTGATGAATACTACTAGTACTAGAATTTTTTTTCTC
TCTCCCTTTATGATTGATTTTCACAGAAAGTGGTCCCGACAGTGTGTTTC
AAACAAACTGACCTAGTATACTTTAAGTGTACAAAGTTGGGTTAACAGAA
ACTTTCACAATTCTCACAATTCTCTTAGGCCCTTTTCGTGAAATCAAATA
AGCTTGAAATTTATGCTTTTGTCAAGTACCTTAAAGAACCTGATAATGTT
TCAAAACCACAATGAATTTGAACCTATTTAAAGTACTGTTTTAGCCCTAT
GCCCTAGGACCTTTGAATTTAAATGACAAAATTTTTTTATCATGCTCAAT
GATCACAATTCTCTAACTCTAAAATTTGTGATTCTGTTCACTGTTTGACA
TTGTTGTTATGGATTATTTAGGTAAAATCTGTCTAGTAGGAATGGAAGAT
GAGCTGGGTGTTGTAGACACTGTGGACAACTCAAGAGCAAGGGCCAACAG
TGACAGGCAAGAGATATTTTTTATACACGTCAATTTTAACCTTAAAAACT
TTAAAGTTCGAAACTATGTTGTTTGAGTGAATTTATTCGGGTCGAATATA
TCAGTATTACTGATACTGTCTTTTTGACGTTTTTTAACTGTTTTTTATAA
TGACTTTAGACTTTATACCTCCATATCTCGATAACTACTTTTCCAAAATT
AAAAATGATACATCAAAATTTAAGTTTGCCTTTCCTCTTTACCATGAAAA
AAGAATTTAGTTAAAATTCAACTTTTTCGGACATAGTTACCCTCCAAACT
CTTATACTTTTTCGTGGTTCACCCGGTAAATGGAAATTTTGATGATTTTA
ATTTTCAGGAGGACATGTTGGGTTTGCTTTGGAACAGACGAGGATGACCC
AGGAGCGAAATGGATCAATCCATGCAGGTGTCGAGGTACCACCAAGTGGG
TACATGATACTTGCTTACAAAGGTGGTTTGATGAAAAACAACATGGAAAT
CCAGCAACTCAAGTCTTTTGTCCACAATGTAATACGGCATACACCATTTC
CTACCCTCCACTCAGTCCACTTCTGGTATTGATTGACTATGGAGAGAAAG
CAGCCAACCGAGTGGCACCTGTAGCAGCGGCTGGAGCAGTAGTTGGTTCA
CTTTATTGGTCTGCTGTGACTTTTGGTGCTGTTACAGTAATGCAAATACT
TGGACATAAGGAAGGACTGCAAGTTATGGAGGGTGCAGATCCTCTATTCT
TGCTTGTTGCTTTACCTACTATACCCCTGGGGTTGATACTAGGAAAAATG
ATACGCTGGGAGGATAAAGTTTTACACTTGTGGAGAGAATATTCTCCTNT
ATTTTTTATACACGTCAATTTTAACCTTAAAAACTTTAAAGTTCGAAACT
ATGTTGTTTGAGTGAATTTATTCGGGTCGAATATATCAGTATTACTGATA
CTGTCTTTTTGACGTTTTTTAACTGTTTTTTATAATGACTTTAGACTTTA
TACCTCCATATCTCGATAACTACTTTTCCAAAATTAAAAATGATACATCA
AAATTTAAGTTTGCCTTTCCTCTTTACCATGAAAAAAGAATTTAGTTAAA
ATTCAACTTTTTCGGACATAGTTACCCTCCAAACTCTTATACTTTTTCGT
GGTTCACCCGGTAAATGGAAATTTTGATGATTTTAATTTTCAGGAGGACA
TGTTGGGTTTGCTTTGGAACAGACGAGGATGACCCAGGAGCGAAATGGAT
CAATCCATGCAGGTGTCGAGGTACCACCAAGTGGGTACATGATACTTGCT
TACAAAGGTGGTTTGATGAAAAACAACATGGAAATCCAGCAACTCAAGTC
TTTTGTCCACAATGTAATACGGCATACACCATTTCCTACCCTCCACTCAG
TCCACTTCTGGTATTGATTGACTATGGAGAGAAAGCAGCCAACCGAGTGG
CACCTGTAGCAGCGGCTGGAGCAGTAGTTGGTTCACTTTATTGGTCTGCT
GTGACTTTTGGTGCTGTTACAGTAATGCAAATACTTGGACATAAGGAAGG
ACTGCAAGTTATGGAGGGTGCAGATCCTCTATTCTTGCTTGTTGCTTTAC
CTACTATACCCCTGGGGTTGATATTAGGAAAAATGATACGCTGGGAGGAT
AAAGTTTTACACTTGTGGAGAGAATATTCTCCCAAATGGGAATTCCTGAA
TAAAATATTTGGTGGAGGAGAAGAGAATAATGGGGCAATACGACGACAGC
CCCTTGAGAATGATAATCAAATAGATTTTGTGAACTCGACACGTGTTTTG
TGTGGTGCTTTGATGTTACCGACTTTTGCCACCGCTGTTGGCAACTACCT
TTTCAAAAGAGTTCAATCACCATTGAAACGAACTTTCATGGTAAGTTTTA
GGGCGATCATTTCTGTTTTTTAAAACTTTGTGATTTAATTGATTTGTTGC
TTTCAGGTGGAAAGTTCTAGGTAAACTATAGTTGTGTTCGTCTGTCAGCC
AAAATTTGTTAGATTTGGACAGTAATGTAAATATCAGAGGGGGATGCTCA
AAGTGCAAATTGAGCTTTAGAAGATTAATTTAAATAAGATTTGTTTCTGG
GATGTTCGGGTTGTTAATTTCCATGCAATACTTTAGGCATACAAACTTTC
GCGAGCAGAAACTTCCGCGATTTTCGCGAATTTTGGCCTTTTTCGCGAAT
ATAAATGTCTTTAAAAATTCTAGGAAAAATTCGCGAAAAATTCTTGACAA
AATAGTAAAATCTGTAAAACTTCAAACTTTGAAGAAAATGTAACTTTTAT
GGCAATTTTTAGCCTGCTAAAAGACTAATAAGTCAAAGGACAAAGGTTTT
AAGTCAATCCAAGGCAAGAAGCATTTGTCTCTCTAAGCCATTTTTTCATG
TGAAAATTCTCAATTTTACGTCTTGATTCGCGAAAGTTTATGCTCGCGAA
AAATATTTTTTCGTCAATTTCGCGAAAGTAAATGTCGTCAATTTCGCGAT
TTTTCGTCCTCGCGAAAGTTTTTGCTCGCGAAAGTTTGTACGTCTAAAGT
AGTTTCTTATTTGTGTTGATTTGATATATTTGCTTTATTTGCGTTAAAGG
GTGGAGTGTCGTTTATCTTTGTGAAAGGAATGATCAAGATCTACTACAGG
CAACATCAATACGTTCGTTTGGCCAAGCGCAAAATCGAGGATTTCCAAGG
GTCGACCAGCGTCTAAAACTTGTAAGCAACAGTACACAGATAGTTATAAG
AAGCATTGTATTGAGAACTGGTAGGTGATTTTCATGAGCCTGGATTTTGT
GAGATTTGTATACAAAGACTACAAACATCATATATCCATTTCGAAAAAAG
AAAAAAAAAACTTACTGTCATAAGATATTTGATTGGTCATAATTATCTTT
AAAAAGGTTTATTTGTAAATAGAGTACTAGAATTTGAGCCAGTAAGGTCC
CATCTCCAAAAAATGTTTATATGATTATTTGTTTTTTTTGCTGAATTTTG
CAATACACAAACCTAGTGAACCTCTACAAATAGACAAGAGACCTGAGAAA
CTCTTTCACCCTCAAATTTCGGAAAGCTTTTCGAAATTTCACATATCCTC
AAAGACAAAACCATTATCAAATTTGCCGAAAATATTTACAAAAAGATACA
CTTTTAGATTTTTTATAAAATGAAAACAACCGAAAGTATTTTACTATCTA
AAAGAAAAGTTTTGTAGATAATCTAATTTTTGGGAGCGATAGCCCCTGAT
ACGGGGGGGGGGGGG Coding sequence (CDS) from alignment at scaffold_350:125217..131631- >TCONS_00060970 ID=TCONS_00060970|Name=TCONS_00060970|organism=Clytia hemisphaerica|type=CDS|length=3672bp|location=Sequence derived from alignment at scaffold_350:125217..131631- (Clytia hemisphaerica)
GGTGGAGTGTCGTTTATCTTTGTGAAAGGAATGATCAAGATCTACTACAG
GCAACATCAATACGTTCGTTTGGCCAAGCGCAAAATCGAGGATTTCCAAG
GGTCGACCAGCGTCTAAGAGGACATGTTGGGTTTGCTTTGGAACAGACGA
GGATGACCCAGGAGCGAAATGGATCAATCCATGCAGGTGTCGAGGTACCA
CCAAGTGGGTACATGATACTTGCTTACAAAGGTGGTTTGATGAAAAACAA
CATGGAAATCCAGCAACTCAAGTCTTTTGTCCACAATGTAATACGGCATA
CACCATTTCCTACCCTCCACTCAGTCCACTTCTGGTATTGATTGACTATG
GAGAGAAAGCAGCCAACCGAGTGGCACCTGTAGCAGCGGCTGGAGCAGTA
GTTGGTTCACTTTATTGGTCTGCTGTGACTTTTGGTGCTGTTACAGTAAT
GCAAATACTTGGACATAAGGAAGGACTGCAAGTTATGGAGGGTGCAGATC
CTCTATTCTTGCTTGTTGCTTTACCTACTATACCCCTGGGGTTGATATTA
GGAAAAATGATACGCTGGGAGGATAAAGTTTTACACTTGTGGAGAGAATA
TTCTCCCAAATGGGAATTCCTGAATAAAATATTTGGTGGAGGAGAAGAGA
ATAATGGGGCAATACGACGACAGCCCCTTGAGAATGATAATCAAATAGAT
TTTGTGAACTCGACACGTGTTTTGTGTGGTGCTTTGATGTTACCGACTTT
TGCCACCGCTGTTGGCAACTACCTTTTCAAAAGAGTTCAATCACCATTGA
AACGAACTTTCATGGTAAAATCTGTCTAGTAGGAATGGAAGATGAGCTGG
GTGTTGTAGACACTGTGGACAACTCAAGAGCAAGGGCCAACAGTGACAGT
ACAGTGATATTCAGTCAGGGTGGAGTGTCGTTTATCTTTGTGAAAGGAAT
GATCAAGATCTACTACAGGCAACATCAATACGTTCGTTTGGCCAAGCGCA
AAATCGAGGATTTCCAAGGGTCGACCAGCGTCTAAGAGGACATGTTGGGT
TTGCTTTGGAACAGACGAGGATGACCCAGGAGCGAAATGGATCAATCCAT
GCAGGTGTCGAGGTACCACCAAGTGGGTACATGATACTTGCTTACAAAGG
TGGTTTGATGAAAAACAACATGGAAATCCAGCAACTCAAGTCTTTTGTCC
ACAATGTAATACGGCATACACCATTTCCTACCCTCCACTCAGTCCACTTC
TGGTATTGATTGACTATGGAGAGAAAGCAGCCAACCGAGTGGCACCTGTA
GCAGCGGCTGGAGCAGTAGTTGGTTCACTTTATTGGTCTGCTGTGACTTT
TGGTGCTGTTACAGTAATGCAAATACTTGGACATAAGGAAGGACTGCAAG
TTATGGAGGGTGCAGATCCTCTATTCTTGCTTGTTGCTTTACCTACTATA
CCCCTGGGGTTGATATTAGGAAAAATGATACGCTGGGAGGATAAAGTTTT
ACACTTGTGGAGAGAATATTCTCCCAAATGGGAATTCCTGAATAAAATAT
TTGGTGGAGGAGAAGAGAATAATGGGGCAATACGACGACAGCCCCTTGAG
AATGATAATCAAATAGATTTTGTGAACTCGACACGTGTTTTGTGTGGTGC
TTTGATGTTACCGACTTTTGCCACCGCTGTTGGCAACTACCTTTTCAAAA
GAGTTCAATCACCATTGAAACGAACTTTCATGGTAAAATCTGTCTAGTAG
GAATGGAAGATGAGCTGGGTGTTGTAGACACTGTGGACAACTCAAGAGCA
AGGGCCAACAGTGACAGTACAGTGATATTCAGTCAGGGTGGAGTGTCGTT
TATCTTTGTGAAAGGAATGATCAAGATCTACTACAGGCAACATCAATACG
TTCGTTTGGCCAAGCGCAAAATCGAGGATTTCCAAGGGTCGACCAGCGTC
TAAGAGGACATGTTGGGTTTGCTTTGGAACAGACGAGGATGACCCAGGAG
CGAAATGGATCAATCCATGCAGGTGTCGAGGTACCACCAAGTGGGTACAT
GATACTTGCTTACAAAGGTGGTTTGATGAAAAACAACATGGAAATCCAGC
AACTCAAGTCTTTTGTCCACAATGTAATACGGCATACACCATTTCCTACC
CTCCACTCAGTCCACTTCTGGTATTGATTGACTATGGAGAGAAAGCAGCC
AACCGAGTGGCACCTGTAGCAGCGGCTGGAGCAGTAGTTGGTTCACTTTA
TTGGTCTGCTGTGACTTTTGGTGCTGTTACAGTAATGCAAATACTTGGAC
ATAAGGAAGGACTGCAAGTTATGGAGGGTGCAGATCCTCTATTCTTGCTT
GTTGCTTTACCTACTATACCCCTGGGGTTGATATTAGGAAAAATGATACG
CTGGGAGGATAAAGTTTTACACTTGTGGAGAGAATATTCTCCCAAATGGG
AATTCCTGAATAAAATATTTGGTGGAGGAGAAGAGAATAATGGGGCAATA
CGACGACAGCCCCTTGAGAATGATAATCAAATAGATTTTGTGAACTCGAC
ACGTGTTTTGTGTGGTGCTTTGATGTTACCGACTTTTGCCACCGCTGTTG
GCAACTACCTTTTCAAAAGAGTTCAATCACCATTGAAACGAACTTTCATG
GTAAAATCTGTCTAGTAGGAATGGAAGATGAGCTGGGTGTTGTAGACACT
GTGGACAACTCAAGAGCAAGGGCCAACAGTGACAGTACAGTGATATTCAG
TCAGGGTGGAGTGTCGTTTATCTTTGTGAAAGGAATGATCAAGATCTACT
ACAGGCAACATCAATACGTTCGTTTGGCCAAGCGCAAAATCGAGGATTTC
CAAGGGTCGACCAGCGTCTAAGAGGACATGTTGGGTTTGCTTTGGAACAG
ACGAGGATGACCCAGGAGCGAAATGGATCAATCCATGCAGGTGTCGAGGT
ACCACCAAGTGGGTACATGATACTTGCTTACAAAGGTGGTTTGATGAAAA
ACAACATGGAAATCCAGCAACTCAAGTCTTTTGTCCACAATGTAATACGG
CATACACCATTTCCTACCCTCCACTCAGTCCACTTCTGGTATTGATTGAC
TATGGAGAGAAAGCAGCCAACCGAGTGGCACCTGTAGCAGCGGCTGGAGC
AGTAGTTGGTTCACTTTATTGGTCTGCTGTGACTTTTGGTGCTGTTACAG
TAATGCAAATACTTGGACATAAGGAAGGACTGCAAGTTATGGAGGGTGCA
GATCCTCTATTCTTGCTTGTTGCTTTACCTACTATACCCCTGGGGTTGAT
ATTAGGAAAAATGATACGCTGGGAGGATAAAGTTTTACACTTGTGGAGAG
AATATTCTCCCAAATGGGAATTCCTGAATAAAATATTTGGTGGAGGAGAA
GAGAATAATGGGGCAATACGACGACAGCCCCTTGAGAATGATAATCAAAT
AGATTTTGTGAACTCGACACGTGTTTTGTGTGGTGCTTTGATGTTACCGA
CTTTTGCCACCGCTGTTGGCAACTACCTTTTCAAAAGAGTTCAATCACCA
TTGAAACGAACTTTCATGGTAAAATCTGTCTAGTAGGAATGGAAGATGAG
CTGGGTGTTGTAGACACTGTGGACAACTCAAGAGCAAGGGCCAACAGTGA
CAGTACAGTGATATTCAGTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060970-exon-scaffold_350-1575043694:131612..131631 | TCONS_00060970-exon-scaffold_350-1575043694:131612..131631 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1575043694:128476..128560 | TCONS_00060970-exon-scaffold_350-1575043694:128476..128560 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1575043694:126592..127288 | TCONS_00060970-exon-scaffold_350-1575043694:126592..127288 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1575043694:125217..125882 | TCONS_00060970-exon-scaffold_350-1575043694:125217..125882 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1510915933:131612..131631 | TCONS_00060970-exon-scaffold_350-1510915933:131612..131631 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1510915933:128476..128560 | TCONS_00060970-exon-scaffold_350-1510915933:128476..128560 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1510915933:126592..127288 | TCONS_00060970-exon-scaffold_350-1510915933:126592..127288 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1510915933:125217..125882 | TCONS_00060970-exon-scaffold_350-1510915933:125217..125882 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1491911889:131612..131631 | TCONS_00060970-exon-scaffold_350-1491911889:131612..131631 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1491911889:128476..128560 | TCONS_00060970-exon-scaffold_350-1491911889:128476..128560 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1491911889:126592..127288 | TCONS_00060970-exon-scaffold_350-1491911889:126592..127288 | Clytia hemisphaerica | exon |
| TCONS_00060970-exon-scaffold_350-1491911889:125217..125882 | TCONS_00060970-exon-scaffold_350-1491911889:125217..125882 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_350 | supercontig | scaffold_350:125217..131631 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
BLAST of TCONS_00060970 vs. Swiss-Prot (Human)
Match: MARH5 (E3 ubiquitin-protein ligase MARCH5 OS=Homo sapiens GN=MARCH5 PE=1 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 2.368e-104 Identity = 151/264 (57.20%), Postives = 194/264 (73.48%), Query Frame = 2
Query: 107 RTCWVCFGTDEDDPGAKWINPCRCRGTTKWVHDTCLQRWFDEKQHGNPATQVFCPQCNTAYTISYPPLSPLLVLIDYGEKXXXXXXXXXXXXXXXGSLYWSAVTFGAVTVMQILGHKEGLQVMEGADPLFLLVALPTIPLGLILGKMIRWEDKVLHLWREYSPKWEFLNKIFGGGEENNGAIRRQPLENDNQIDFVNSTRVLCGALMLPTFATAVGNYLFKRVQSPLKRTFMGGVSFIFVKGMIKIYYRQHQYVRLAKRKIEDF 898
R+CWVCF TDEDD A+W+ PCRCRG+TKWVH CLQRW DEKQ GN +V CPQCN Y I +P L P++ ++D ++ ++ P AAAG +VGS+YW+AVT+GAVTVMQ++GHKEGL VME ADPLFLL+ LPTIP+ LILGKMIRWED VL LWR+YS K + LN IF G + R P E + D V++TR+LCGAL+ PT AT VG +F V S L+RT +GG++F+ +KG K+Y++Q QY+R A RKI ++
Sbjct: 12 RSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEYLIVFPKLGPVVYVLDLADRLISKACPFAAAGIMVGSIYWTAVTYGAVTVMQVVGHKEGLDVMERADPLFLLIGLPTIPVMLILGKMIRWEDYVLRLWRKYSNKLQILNSIFPG---IGCPVPRIPAEANPLADHVSATRILCGALVFPTIATIVGKLMFSSVNSNLQRTILGGIAFVAIKGAFKVYFKQQQYLRQAHRKILNY 272
The following BLAST results are available for this feature:
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