TCONS_00060982 (transcript) - C. hemisphaerica

Overview
NameTCONS_00060982
Unique NameTCONS_00060982
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length366

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00060982 ID=TCONS_00060982|Name=TCONS_00060982|organism=Clytia hemisphaerica|type=transcript|length=366bp
ttcccctaccccttagctttccaaaaatgtataacaagtgcttctaacaa
aacagtcgagcgattccaaaaaatcgaacaaaattccccctactaatagc
cgtgaaatcatgcgtccggaaagggttaactTATTGGCGGCATTATAGAT
TAGCTCTGTTCTGATCTTTAGTTTATCAGATCGAGTTCAGACGTGATTGT
CATACTTCTCTGTAAGAAAGGGCGAACCCAATTTGTATTTTGCTTTAGTT
ATTTATAAATATTATTCGTGAAATTATTGGTtacaatttaaaatatttca
aagttgCATTATTTTTACGCTTGTCTTGAAGTCAGTTAAATGTTTTCTAC
TCTAcgggaataaaag
Run BLAST on NCBI

transcript from alignment at scaffold_350:113423..113788

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00060982 ID=TCONS_00060982|Name=TCONS_00060982|organism=Clytia hemisphaerica|type=transcript|length=366bp|location=Sequence derived from alignment at scaffold_350:113423..113788 (Clytia hemisphaerica)
cttttattcccgTAGAGTAGAAAACATTTAACTGACTTCAAGACAAGCGT
AAAAATAATGcaactttgaaatattttaaattgtaACCAATAATTTCACG
AATAATATTTATAAATAACTAAAGCAAAATACAAATTGGGTTCGCCCTTT
CTTACAGAGAAGTATGACAATCACGTCTGAACTCGATCTGATAAACTAAA
GATCAGAACAGAGCTAATCTATAATGCCGCCAATAagttaaccctttccg
gacgcatgatttcacggctattagtagggggaattttgttcgattttttg
gaatcgctcgactgttttgttagaagcacttgttatacatttttggaaag
ctaaggggtaggggaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038282XLOC_038282Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00060982-exon-scaffold_350-1491911889:113423..113788TCONS_00060982-exon-scaffold_350-1491911889:113423..113788Clytia hemisphaericaexon
TCONS_00060982-exon-scaffold_350-1510915933:113423..113788TCONS_00060982-exon-scaffold_350-1510915933:113423..113788Clytia hemisphaericaexon
TCONS_00060982-exon-scaffold_350-1575043694:113423..113788TCONS_00060982-exon-scaffold_350-1575043694:113423..113788Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:113423..113788 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.74225	4.19217	3.77916	3.53022	7.13111	0.812725	5.01491	2.77484	1.24874	2.04591	0.431596	2.06306	1.46291	0.424085	1.71057	1.94697	2.19995	3.57612	1.5568	0	3.2613	7.65219	2.12764	2.99024	1.43327	0.636637	8.16761	6.60064	8.2776	7.91339
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060982 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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