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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00060987 ID=TCONS_00060987|Name=TCONS_00060987|organism=Clytia hemisphaerica|type=transcript|length=1087bp
AACtacaacaataaattttgaaattctgcaGAACACAAAACGGACCATAA
ACACAACATGGAAAAAATCAATATTCATCAAACATCGCCGTACAAACTGT
CAGTATTGTCATTTGAAATTAATCACACAAGTTTAAAATAATGCAAATCG
TACAGCAACCAGCATGAGATTCAAGCCTAATTTCCCATCAGCATTCCTCC
AGTATAAAGTatgcaaaagtttttatctAATAGTCACAAATAAGAAATAA
AGCAAAGCAGAATAGAGATTCCATTGAAATATAATCTCGATAAAAAAAGA
CGGGTTTAATAGGTGATTAAGTGAAATAAAACGCTATTTCTAAATTCCAT
TTTAAAGTTTTGCAACAggaataaagatatccaaaagTGTTGACATTAAG
CTGACGCTGTTCATTGATTCCAACCTTTGTTTGATCCTTTGATCCTTGGA
TAGTCCAGTGATATGTCCCAAGTAAATCCCACCCTACAGTCCGTCTATAG
AAAACATCCATCTATTAAAACCAAGAAGAATTCAAAGCGTTGAAAACAGG
TCATAAAAAGTATATCACACTGCAAAATGTAACACTTTACCTTAGGCACA
CGTAACGTAACGAAATGTGACACGAAAGACAAGTCTGTCTACAAATAGAT
ACCAAGTTTAACCTTTTAAGATTTTTAGTTTCAGTGTTTTCGTTCTCATT
CAATTTATATACAAAGTGATGATATAAATTGAACATTAAACGGTCCTCTC
AAATTCCATCCCCTCACATTTAAACCTTTTAGAGGTTGGACGTTAGCATC
GTGATTACTCTCTTGTAATCACGTAAAGAAACGATCACGCTGTTTCTCAA
TAGAGATTCTCTTTGCATGAACTggtacgaaaaaaaaaacatactgagta
cttttccatgttttttatttaagagCTGTGAACCATGGCATCGTAAGATA
TCTTTTGGACCTTATTTTCAATAGATCGACTAACTAATAATAGTGAAACA
GTGAGTGTCTTAACAAGATAATGCTGACAACTCATGGTCGAtgaatattt
ttgccatttcGAATCTTCATCATCACAACAATTCCCC Run BLAST on NCBI transcript from alignment at scaffold_350:175163..176249 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00060987 ID=TCONS_00060987|Name=TCONS_00060987|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at scaffold_350:175163..176249 (Clytia hemisphaerica)
GGGGAATTGTTGTGATGATGAAGATTCgaaatggcaaaaatattcaTCGA
CCATGAGTTGTCAGCATTATCTTGTTAAGACACTCACTGTTTCACTATTA
TTAGTTAGTCGATCTATTGAAAATAAGGTCCAAAAGATATCTTACGATGC
CATGGTTCACAGctcttaaataaaaaacatggaaaagtactcagtatgtt
ttttttttcgtaccAGTTCATGCAAAGAGAATCTCTATTGAGAAACAGCG
TGATCGTTTCTTTACGTGATTACAAGAGAGTAATCACGATGCTAACGTCC
AACCTCTAAAAGGTTTAAATGTGAGGGGATGGAATTTGAGAGGACCGTTT
AATGTTCAATTTATATCATCACTTTGTATATAAATTGAATGAGAACGAAA
ACACTGAAACTAAAAATCTTAAAAGGTTAAACTTGGTATCTATTTGTAGA
CAGACTTGTCTTTCGTGTCACATTTCGTTACGTTACGTGTGCCTAAGGTA
AAGTGTTACATTTTGCAGTGTGATATACTTTTTATGACCTGTTTTCAACG
CTTTGAATTCTTCTTGGTTTTAATAGATGGATGTTTTCTATAGACGGACT
GTAGGGTGGGATTTACTTGGGACATATCACTGGACTATCCAAGGATCAAA
GGATCAAACAAAGGTTGGAATCAATGAACAGCGTCAGCTTAATGTCAACA
cttttggatatctttattccTGTTGCAAAACTTTAAAATGGAATTTAGAA
ATAGCGTTTTATTTCACTTAATCACCTATTAAACCCGTCTTTTTTTATCG
AGATTATATTTCAATGGAATCTCTATTCTGCTTTGCTTTATTTCTTATTT
GTGACTATTagataaaaacttttgcatACTTTATACTGGAGGAATGCTGA
TGGGAAATTAGGCTTGAATCTCATGCTGGTTGCTGTACGATTTGCATTAT
TTTAAACTTGTGTGATTAATTTCAAATGACAATACTGACAGTTTGTACGG
CGATGTTTGATGAATATTGATTTTTTCCATGTTGTGTTTATGGTCCGTTT
TGTGTTCtgcagaatttcaaaatttattgttgtaGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00060987-exon-scaffold_350-1491911889:175163..176249 | TCONS_00060987-exon-scaffold_350-1491911889:175163..176249 | Clytia hemisphaerica | exon |
| TCONS_00060987-exon-scaffold_350-1510915933:175163..176249 | TCONS_00060987-exon-scaffold_350-1510915933:175163..176249 | Clytia hemisphaerica | exon |
| TCONS_00060987-exon-scaffold_350-1575043694:175163..176249 | TCONS_00060987-exon-scaffold_350-1575043694:175163..176249 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_350 | supercontig | scaffold_350:175163..176249 . |
Blast
The following BLAST results are available for this feature:
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