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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061230 ID=TCONS_00061230|Name=TCONS_00061230|organism=Clytia hemisphaerica|type=transcript|length=1195bp
AGAACATCCTGATTTAGACTTTTCTAATGTTGATTTGAATTTAGATCTTG
AGGATAGGCATTCAACTTATGGACTGTTTTATAGAAGAACTCGCCCACCC
CCATATTAAATATATCAATAATAAATATCAGTAtaagtaataataataat
gataacaaTAACTTACTTTCTTTACCCTGCTTTATGCAGCAATCTCCCTT
GTTTGACTTGAAGACATCCAGGCtctaaaattcaataatttataTACATA
CTTAGTATTTATTGATGAAAAGAGCTCTTCAAATTGAGCAAAAGATGTTC
AACATTCAGACTGAGTTTCGAGTTCAGCTTTTCATTAATTTGAACCATCG
GAAACAAAAATTGGAAGGGGTAATTGtgataaaaaggaaaaatgaaataa
CAGATTGAAATGATGTTAATGAAGACATATCTCTTTTTTGATTAGACATA
TCTCTTTTCATTAATTTGAACCATCGGAAACAAAAATTGGAAGGGGTAAT
TGtgataaaaaggaaaaatgaaataaaagatTGAAATGATGTTAATGAAG
ACATATCTCTTTTTTAAGACTAACTAAAAAGTATCAAGGAACAGACTACA
ATTAGTGCTATCGTCAATATTTGATATGTCGATAGACAAACCCTGCAAAA
CCTCGGACCTTTTAGAAGATTGTTGAGGATTTCTTTTCATTCATCGTTAT
CATAAAAGGGAACATTAGGAAATTTTATATTGTTTCAGAGGGCCTGCTAA
GCAGTATTCTATTTAAAACCTTCACGCTTCCGAGCCAACCAGAAGCTGCT
CAAATCATATATAAAATTTAAAGGGTTTTCACAATCCATCATAAGTTTTG
GATTTCATTCAAGGAAAAActtattaaattttaaaagaacaatttttagg
TGAAAGTAGATATATTTTTGTATCAATTCTCATGAAAACCATCTTGGTTT
CTATCTAAGGCCTGTAATTTGAAAAGATGGTTTTTTGATACATTTGACTT
TCGATACttttaattttggtttataaagaaaatttggaTTTACCCGAAAT
TCGTTTCATTATACgctcaaatttcatatttctgCTGTCCGCTAAATTTG
ATCCTGGTTACGTATTTTCAAAGCTTGTGCTATTTCAGGGCATAAAACAC
GACTTTTAGCCAAAAACCATCCTTTAACCGCCAAAATTCTATCTA Run BLAST on NCBI transcript from alignment at scaffold_354:62334..63528 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061230 ID=TCONS_00061230|Name=TCONS_00061230|organism=Clytia hemisphaerica|type=transcript|length=1195bp|location=Sequence derived from alignment at scaffold_354:62334..63528 (Clytia hemisphaerica)
TAGATAGAATTTTGGCGGTTAAAGGATGGTTTTTGGCTAAAAGTCGTGTT
TTATGCCCTGAAATAGCACAAGCTTTGAAAATACGTAACCAGGATCAAAT
TTAGCGGACAGcagaaatatgaaatttgagcGTATAATGAAACGAATTTC
GGGTAAAtccaaattttctttataaaccaaaattaaaaGTATCGAAAGTC
AAATGTATCAAAAAACCATCTTTTCAAATTACAGGCCTTAGATAGAAACC
AAGATGGTTTTCATGAGAATTGATACAAAAATATATCTACTTTCAcctaa
aaattgttcttttaaaatttaataagTTTTTCCTTGAATGAAATCCAAAA
CTTATGATGGATTGTGAAAACCCTTTAAATTTTATATATGATTTGAGCAG
CTTCTGGTTGGCTCGGAAGCGTGAAGGTTTTAAATAGAATACTGCTTAGC
AGGCCCTCTGAAACAATATAAAATTTCCTAATGTTCCCTTTTATGATAAC
GATGAATGAAAAGAAATCCTCAACAATCTTCTAAAAGGTCCGAGGTTTTG
CAGGGTTTGTCTATCGACATATCAAATATTGACGATAGCACTAATTGTAG
TCTGTTCCTTGATACTTTTTAGTTAGTCTTAAAAAAGAGATATGTCTTCA
TTAACATCATTTCAatcttttatttcatttttcctttttatcaCAATTAC
CCCTTCCAATTTTTGTTTCCGATGGTTCAAATTAATGAAAAGAGATATGT
CTAATCAAAAAAGAGATATGTCTTCATTAACATCATTTCAATCTGttatt
tcatttttcctttttatcaCAATTACCCCTTCCAATTTTTGTTTCCGATG
GTTCAAATTAATGAAAAGCTGAACTCGAAACTCAGTCTGAATGTTGAACA
TCTTTTGCTCAATTTGAAGAGCTCTTTTCATCAATAAATACTAAGTATGT
AtataaattattgaattttagaGCCTGGATGTCTTCAAGTCAAACAAGGG
AGATTGCTGCATAAAGCAGGGTAAAGAAAGTAAGTTAttgttatcattat
tattattacttaTACTGATATTTATTATTGATATATTTAATATGGGGGTG
GGCGAGTTCTTCTATAAAACAGTCCATAAGTTGAATGCCTATCCTCAAGA
TCTAAATTCAAATCAACATTAGAAAAGTCTAAATCAGGATGTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061230-exon-scaffold_354-1491911889:62334..63528 | TCONS_00061230-exon-scaffold_354-1491911889:62334..63528 | Clytia hemisphaerica | exon |
| TCONS_00061230-exon-scaffold_354-1510915933:62334..63528 | TCONS_00061230-exon-scaffold_354-1510915933:62334..63528 | Clytia hemisphaerica | exon |
| TCONS_00061230-exon-scaffold_354-1575043694:62334..63528 | TCONS_00061230-exon-scaffold_354-1575043694:62334..63528 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_354 | supercontig | scaffold_354:62334..63528 . |
Blast
The following BLAST results are available for this feature:
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