TCONS_00061409 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061409
Unique NameTCONS_00061409
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2331

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061409 ID=TCONS_00061409|Name=TCONS_00061409|organism=Clytia hemisphaerica|type=transcript|length=2331bp
AAGCACCCGTAATACATGCCCTGCAAAGCATGAGGCTTCCATTTCAAACA
TTTGGAGAAGACGCAGCCCAGCGGAGCTTCAAGTTTATACCCTCGAAAGA
AAATCCAGAGTAATCGAATCCAGGAACTATGCCTTCAGGCGATTTGGATA
ACTGTTACTCCATTGGAGTCGACAACAAATTTGGAACTTGTGATAGTGAC
ATCGAAGATCCCTATGAACTTATTCTAGCTGCtcaagaaaaaccaaaaaa
ggaAAAGGAGCCAAAAGTCAAAGGAAAGAAAGATGTCAAAACAGCCAAAA
CTACCGAGAAAAAAACTGTGAAAATCGAAACTactactgaaaatgaaaac
tcgGAAAACAAAAGAAATGATCGACCAAGAAATGAACGTGGACGTGGTAG
AGGACGTGGAGGAAGAGGTGGTCGTGGAGGAGAACGCGGTGAGCGTGGTG
GTCGTGGACGTGGAGGATTCCGTAACAACAATTTCAGCCCAAACAATAAC
AACAATCAAGGTGGATTTGGATTTGACAACAACAATCAAGGAGGCTTTGG
ATCTTATCAAACACAAGTTGCTGAAACCAATGAGGGTGGATTTGGCTCTG
GATTTGGAGGAAATGATGGTGAGGAACGACGTGGAGGTAGAAGTGGCTTC
AGAGGGAGTGGACGAGGTGGCAGAGGGGGTCGTGGACGGGGGCGTGGTGG
AAACAGGGAGTACGACCGTAGAAGTGGTAGTGACAAAAGCTCTGTCAAAC
CAGCTGACAAACGTGATGGCTCTGGATCATACAACTGGGGATCTCCTCAA
GATGAAATCAATGCTGCAAGTGAAGAAAATGGTGGATTTGGAGCACCCAA
AGAAACTGAAGAAACTCCTGCTGAAAACGTCGAACAAACTCCAGAAACTG
aAGAAACGCCTGAAGTAGAGCCAGTTGATGAAGGGCCACAAGAAATGACA
TTAGAAGAATACAGAAAACAACAAGAATCAAGGAAACAACCTGAATTCAA
TTTGCGTAAAGTTGAATCAGACAAGAAAGGACTTAAACCATTGAAGAAAC
CAACTGAAAAAGACAATGAATCGTCAAGCTCATTCTTCTTCCCAAGAAAG
AATGTCCAAGAAACCTACAAGTCATCTGGTCGCGTCAAGGAAAACTTAAA
CGTGAACATCCGTTACGGAAGTGGTGATAACCGTCATTATGATGCTTCTC
GACGTGGACGCGGTCGTGGTGGTCGACGTGGTGGACGTAGAGACGGCGAA
GGAAACGCAAAGGACGCAACAGGTTACGCTTTGACGAACAATGAGGAATT
TCCATCATTGTAAACGTTGGCAGCGTTCGCCGTCCAACGCCTTTGACAGG
TTTTAGTTACCTGGATTCATTACTTTTGGATTtcttaaacaaaatctttc
gcCGCAAACAAACCATCAATAAAATCAATAGCTTTATAAAAAAAGACTAT
ACACATAGAGTGTAACCAGAAACTTTAACAACTATCTGGAATCAAAgcac
tttgtttattttttgtaataGAACTGGTATTACAAAATGCTTCGTGTTTT
TTAATTAAGATACGCAGGACAGTATTTTTAGTTTGGTAGACAACATCTTT
GGGATTGGAGAGATCACGTCGTCGAACCCCTTGTAAATATAATTTGCCAT
AACACTCCTCATCTCTCGCTTGtcacgtgattttttttaaatactgaaAC
AAAGTCTTTGGATAAACTTaaacattttcatattttctggtaccttaagg
gaactaattttcgcggttctAGAGGCTagagtctatttcaaattagctaa
ataacttttgatagaatttgaatcaagtAGCGATTTTATGttcgttgaaa
agacaaacaggagtgggaTATTGTCATAAAGAAGAAACGCAAAAAGATCG
GAAAATGAGGAAAATCtgcttttttaaaataattgcGCTATAATGatcat
tttcacacgagtgattctttgatcgTAGAACATCATTATtcaaaagtcat
caaaaaacgacaaaaagagCCCTTTTTAAGTCAACTAGGGCACTGTTTTA
GGGTgtagtttttttcttcttttttatttttcacctttgttttccttttt
ttttttcatttttggtaatattccactccggattatctttttaacgaccA
CAAAACCACTAACTAAtgcaaattctatcaaaagttattaatttcgctta
gcgaaagtattacgatagcctttctgcggcggcggcgcgtattttttttc
cgtcagcggtCTAAACCCAACTTCAGCGGTCGAAACCCAGCTTAGCGGTC
GAAGCCCAACCTAACGGCCGAAACCCATTTT
Run BLAST on NCBI

transcript from alignment at scaffold_358:639000..654213+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061409 ID=TCONS_00061409|Name=TCONS_00061409|organism=Clytia hemisphaerica|type=transcript|length=15214bp|location=Sequence derived from alignment at scaffold_358:639000..654213+ (Clytia hemisphaerica)
AAGCACCCGTAATACATGCCCTGCAAAGCATGAGGCTTCCATTTCAAACA
TTTGGAGAAGACGCAGCCCAGCGGAGCTTCAAGTTTATACCCTCGAAAGA
AAATCCAGAGTAATCGAATCCAGGAACTATGCCTTCAGGCGATTTGGATA
ACTGTTACTCCATTGGAGTCGACAACAAATTTGGAACTTGTGATAGTGAC
ATCGAAGATCCCTATGAACTTATTCTAGCTGCtcaagaaaaaccaaaaaa
ggaAAAGGAGCCAAAAGTCAAAGGAAAGAAAGATGTCAAAACAGCCAAAA
CTACCGAGAAAAAAACTGTGAAAATCGAAACTactactgaaaatgaaaac
tcgGAAAGTGAGTATTACTGTTTCCAATGTTTTTAAATGcttctattttg
ttttgttgttgtattGCTTTGAATTGTAAggtcagtcagggaaatccctc
aattgcggtatactgcaatacaccttatcggaaattccacaaaaacaatC
GCGCTTAAATGGATCCGTTgaaattgggaggtaaacataTATGGGGAACA
ATGGTGGCGTGAGTAGTGCTAAAAGTTCCTGCGTAAAACAAGAACTCATT
TGCTTATCTGGCTTGTTTATATGTTCCCAAAAATACATTattgaatacac
ctttcccgtaattcaaatttcttagaaatggcccgggaaaatgtgggctc
caccgttgtgtatataattgtttgggaggtaaaaaacctctaacttttga
cagcgatcttcttttggcaaaatattttcagggtggtataatatcatgaa
tagattgaacatacaaaaatttgaggggattttgtttgacagaacttaag
aaaagctcaaaaaaccaactctccctaagggaacgcagccaaaaacaggt
ttgtttacctccagagaccaaacggtggagagcatcaaaataatgcgcac
acattagttttacgaaaggtgtatttgaaaaaaacaaacaaaacaaagct
ttcaagatgctagCAGAAGCTATAAGAAAGAGAATAACAACAACTTCGGT
GGTTTTTCAGTTGATTTGGAGGCTCTTTTGGCATCAATATTTTAggtgtt
ttgtaaggctttttgcctgaaaaccgcaaTATCACGCTTTGTTTATCTCC
CTAAAAGTGTTGCGTAGCAACAACACGATtaggtggaatttccgataagg
tgtattgcAGTAGTCAGAAAATTGCAGTAGTTTTCATTTGTGgttagcct
acaaaggcttataaaCAGCTACATATAGTGCCGGttgacaaagataaaca
aacatcgacGGTAAAAAATTTACCTCTGGGAGGTGAACAAACCTGTTTTA
GCTTGTGAGAACCCTTAAACATGCCCAGAAACTTTATTTCCAATGTCTCA
GTCTTCTAATTCACTTAAAAAGTCATCTGAGACATCTCTTATCTACCTCC
TCTATCAGGGGTCGCTCACAAATGGATTTTAGGTTAGCCACCGACCCACA
CCCAGAGGCTttgtggtatagtggacatcaaccttgattcctgtacaggc
gaccaaggttcgattcccactcacaacggttcacttggcaagtgaacaaa
ccttcgcccgggtcaacccatgccatatGAGGGGAACTGCCTTCATcgct
gtttcgtcagccatcttgattttcactacggctcgcatatttaatattta
aaaaaaagaaactgaGATAATTTCTAAGCTTGTTCACAAAATTCCCGTAA
TTAATTATCTCTATAGTATATAGCGAACAGAAAAAAATGGCCATCTGCAA
AAATTCGAGGACCAGTCGGgccgtcaaacaaagaaaagacaaaCATCAAG
CTGTTTCTTTTAGTTTTTAAAACAGACGAAGCGATCAATCAGAAACATGG
CGAGAAGTAATATATCGATGTTTctggatttgaaaaaaattgtcaacaTA
CTTAAACCCATCCACCCACTGAagtcaattgacgtttttctaatttaaaa
tcgatttgtgagtgaccccttacaGATCCTTGCATCATTTGCACAGGGTT
TTGGCGCCTGCAATTCGTTGCAAATATTCAGGGTGTCAAAAACTAAAATG
AAGTAAGGTTTTGCTGAAGACAACCGTTGCATTTGCATgagacaaaaaat
tcaaagtgaaGATTTTTCCCTGTTAATGCTTAAAGGGacaaaagtagtaa
aatgtaaaaattgcgCAAAGCATGTAcctacgggaccttgaaaaccttga
aatattgttaaaaaccttgaaaagcactatccagtcattcgaaaagtaag
aataagtaaaaaaccgcctgcggcgctaaacctTTCCATGATTTAGAGAA
TTCCATATTTCCCTGTTTCTGTTGCGACTCTGTTGCAACGAATGCAacat
attcttttatcattagctgagtttttgtcactaattttcctatgcatgag
ccctaagaaatcggctgttccccattttttaaatcgcttcagggcgtctt
ggaataatggccgttcatcaataaaatttcaaggattccttaaaacaact
cttttggcaattgatttttgtaaaaaacaaaataaaaaacaaggcgtttt
ttagccatttgaaagagtcaaaatccaaattttctcCCGTTGGCGCAAAC
AATGGTTCCGCCTCCTCGGTCACTGTAAACAATTGGTTTTGCctctaatt
ctttatttttacaGTTGAAAGACTAGGGAGctggagtatttctttttatG
GTAGTGTCCTCGAGAGGGAGGTAGGAATTTAACTGTGGAAGTAATTCCCT
gggcaccaaaagcgaataaattttatttgctgtccTCTACTTTTCTTCCA
GCACCTaccactctgaaaaaaaaaattcctgtaaAGGGCCATATCAActg
agtatcaaaaaaccttgaaaaatgccaaagtttttgccaaaaaaccttga
aaaaccacttaaaaaggaccaaaaaatccttgaaaaccttgaaaatcccg
aaaaaaaatccgtagacaccctgatGTATCATTAACCCTTTATAGGCTGA
GTTCATCTCCTTTTTTCTTTACTCTCAAGGCATCCTTGATTATGCCAATA
CATAAGTTTTTAAATAACTTCTCAATAACTCTAGCTACAGCTCATTCATT
TAACCCCACTTTGCACACGTGAAATTGTACTAACTTTGAAGAATATCTCG
CCGAATAACTTTGCTATTGACATGCGGTTTTTTGTATTGGAAAGCTTATA
ATATAGCCTATTGGCTCAAATTTATTTCAGTAATGTATTCTCCTTGGGTG
TtgcataattaatttttgaaaattggggtATCCGTATGGATCTTGTGGCC
CAAATGGTATTGGAGAAATGGTATCCATATGGATATTGTGGCCCAAATGg
atagaaaatttttatttgtatcTTCAACATCATACTAAAAAATTAAGAGA
CTTCATTCATATGCGTCTGTTCAAGAGTAATCTAGCACATGTCTCAACCA
TGCTGAAAACAATGACATAATTTTTGCCATAAAAATAATACATCGAAGTG
GTTTATGTTGCTGTAGCGTACTACAAGGTGAATCACAAATTTAAGACAGC
AATTGAAAATTACTATTTCAAATTAGATGAGGCTACAGTGTGTCAGGAGT
AGCCTCTGCATCACATAAGAGAACCAAGAGGAACATGTCTGCAAATTGCC
TTTTTTTCggcatttttgaaaatctgtttATTTTATCCACGCCAGAGAAA
TCCGGGCGGGCGTGTTTGAGGATCCTTGCTTGTGTTCCCTTATAGGGAAA
GTTgggtttttgagcttttcttaaatTGTGTCAAACAGaatcctctcaaa
ttttgatgttctttcTATTTATGATACTATTATCGCCAGTTATCGCCCTG
AAAATTTTCATGATTGAATCAGGGGGTaccaagtcagtgtactggaccat
agggtactaacttgatttttggatttttgataccaccctttcagtacact
gtaTTAACTTTCTTCCACTGTCGAGGCTTTGGCACGACCCTTTTAGTATA
TTGTACTGACTTTTCTCGATGACCGGATttttgataccacccttttagtg
cACTACTAACTTCCTTCCACGGCCAgtgctttgacaccacccttttagcA
CACTGTACTGACTTTTCTCCATGACcggatttttgataccattcCTTATA
GTGCACTGTTACAATTTCTTCTTGGCCAGATAAGTTTAATTGCCACCATA
TACAAAGGTTTTGAAGCGTTTTGCTAAGAAAAGCATCAAATTAGCTAtat
aaaaggaaagattttaatattaaaatatttgaatccTTGTAGTACAAACA
CTGTAACAATGAAACAGACAAAGTCGTTCAAATACAGTGAAATTAGCATG
TCAATGCCATAATGTAGATAGGGCTTTAAAGAAAAGGCCAGTCTTCACTT
GTGCACGCTGCGACTctgaaacaaatccaatcaagtAAACAGGAAACATT
GGGAGAAAATCAGTGTACTAATTTGTACAGGGGGGttggtagtaaaatct
cagacatacatgagtagtaaaaagatttttacgaatttttacataccacc
acccagactcttggaagaggtattttactaccctggtaggacaatttgtc
ataaagacatctttttggttgcttttcagactgattttacaaaataaGCT
AAAGAATggttatttctgtgacacatttttcactttgtgcaaaaattgat
gttttgcccttagaattaaagtcttttgatattgaattttttgtttgcag
aaaacaactttccaacagaaaatttttcaagttaaggaaattttcagatt
ttttcagaaaagtcatctaaaaaattaaaagaattacaaaaatagctaaa
atttgctacagtaattttaccagttttaactacccaggttgtaaaatttt
ttcaacatttaacaccatggcttggcagcaggttttaggtgccccctaag
aattcaggtgacccctaagatttaggtaacccctggttgccaaatatttt
aggtgacccctaagcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAAAATCCTTTTCATTcagacaatcaaacaaatacaatagtta
gtttagcttattgctaaatagaataaatgccctaCTAAGAAATAGGAAAT
AAGCTAAGTACTGAAGGTTCATGCcagattatcaaggttttgtaagtcaA
AGGGCAAATCCCTtgccagacagattttttatctaagtaatGCAACagaa
ttaaaaagtttttacagataatatattagataccaaattttcaatttttg
agcattgcttagaTTGGGCGGTTCAAGTTATAGTCCGTTAACCCCATGTG
AACGACATGGATTTTTCGTaacaattttaataatttacttttgaaaaact
tcaggattTCCATAACATTCAAGATTTATGGGAAAATATTGGATTTTCCG
AAACTTGGCAAGAAAATAGAGcacattttatggattttccaaTACATATG
ACTAAATAATGAGGAAAAATCCTGGATTTTccgaaacctttttcaaattt
ctcaggatttccaagtgaaaaaaattcccaaaaaccCTGTCGTCCACAGC
TTTGGTAATGGttttttctggaactgcccaACAAAATATAAGATGAGAAA
GTGCCAACCTATGGTCTGGTAGGCTGCTTATGATGAAAAGCatgttcaga
aaaaaatcaccaaacaataacatagaatctagcccccaggcagatccatc
tgaaaaaatttaggtgacccctaacatggttagtcccccctagccacagg
ctaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGAATCAATGAATATGGTCGGCAATG
AACTGCCGACCATACGCACTCTTTGGTCGGCTTTTAGGTCGGCActgccg
aatgccgacctgaaattcgagggctgcagataccacccattttagtattt
aactaccctgtgTAGTAAAACACCACCactagtaaacgtcattatgtctg
agattttactactgACCTTCCCCCCTGATTTGTATAGCTTAACCTGCCAT
GACTTAAAGGTCTCGGACCAGCTTGGACCTGGGAAATTAGGGCAAATATA
CATGGGAATTCTCTGTACAATGTACTAACAGCAAAGAAAAGTAATCAACC
ACCACCATCCaccaattttgaattttcaaggaGATCCCTGGACAGAGTTA
TTATCTTTAGAATTGGAGCCTTTGAATAAATATCATCTTTTTAATAGACA
AAAGAAATGATCGACCAAGAAATGAACGTGGACGTGGTAGAGGACGTGGA
GGAAGAGGTGGTCGTGGAGGAGAACGCGGTGAGCGTGGTGGTCGTGGACG
TGGAGGATTCCGTAACAACAATTTCAGCCCAAACAATAACAACAATCAAG
GTGGATTTGGATTTGACAACAACAATCAAGGAGGCTTTGGATCTTATCAA
ACACAAGTTGCTGAAACCAATGAGGGTGGATTTGGCTCTGGATTTGGAGG
AAATGATGGTGAGGAACGACGTGGAGGTAGAAGTGGCTTCAGAGGGAGTG
GACGAGGTGGCAGAGGGGGTCGTGGACGGGGGCGTGGTGGAAACAGGGAG
TACGACCGTAGAAGTGGTAGTGACAAAAGGTATTTATATTGTATTTCTAG
TGGTTCCTCTTACTGACTGTAAAGTATAGTCTTCATGACTGACCTGAATT
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTTTGAATAA
ATATCATCTTTTTAATAGACAAAAGAAATGATCGACCAAGAAATGAACGT
GGACGTGGTAGAGGACGTGGAGGAAGAGGTGGTCGTGGAGGAGAACGCGG
TGAGCGTGGTGGTCGTGGACGTGGAGGATTCCGTAACAACAATTTCAGCC
CAAACAATAACAACAATCAAGGTGGATTTGGATTTGACAACAACAATCAA
GGAGGCTTTGGATCTTATCAAACACAAGTTGCTGAAACCAATGAGGGTGG
ATTTGGCTCTGGATTTGGAGGAAATGATGGTGAGGAACGACGTGGAGGTA
GAAGTGGCTTCAGAGGTAGTGGACGAGGTGGCAGAGGGGGTCGTGGACGG
GGGCGTGGTGGAAACAGGGAGTACGACCGTAGAAGTGGTAGTGACAAAAG
GTATTTATATTGTATTTCTAGTGGTTCCTCTTACTGACTGTATAGTATAG
TCTTCATGACTGACCTGAATTGGATTAAAGTCACTCATTTTAACAGTATG
TGTACAGGGCTACTGGTAAATAATGTCTTGAAAGTGGAAAAGATCCATAT
TCTGGGGTTTCGTGGAATTTTGAAAGGGGGTAGAACCTAGATTGGGGGTA
GTGAACCATGGCCATCTTTTCTATTCTAGTATCCAAGAAATCAaggatta
aaatttttttagcaTACATTACCACTGCTAACTAAATGccttttttagat
ttaaatACTGGCATCCTTGATTCTTAAAGATTCAGCTTAATCTATCAATA
CCTAAAATCTTGTCTGAATTTAATTTTCTTACAGCTCTGTCAAACCAGCT
GACAAACGTGATGGCTCTGGATCATACAACTGGGGATCTCCTCAAGATGA
AATCAATGCTGCAAGGTATGTATGGCAGGCTGCCTCTATCATTTAATTTT
AAATGGTACTTTTTCTGTACCTCCTTGGTAGATGATGTCTATTATCCAAT
CATTTGTCATCGTCATCAATTTCCAGGCCTTTCCACAAATAAAATCGATG
AATTGATCTTGTACAtgatttgacaaattttttacCAAATCACTTGCGTC
AATCAAATTTTGCGTGCGCAAATTAaccaaaatattataaaataacccaa
aaatatttttgatgtaaTGGTATGGATTCTTGCCTTATCTATATCATAGT
GTGTGTTTTGATTACAAAAAATATACAGTGGAATTTCTCCATTTCCACTA
CCCTTTAACTCAAACATGTCTGTCTACTCAAACATTACAGGATGCTAAAa
gtgtttaatttttctatttaaaCCTTTGTTAATtaaaccatttttaaaaa
gtctaTCATTCCCATTTTCAATTGAGCTTATCAGCTGCGAGATCACCCTT
AAACAAAGATAACTTTATTATGATAGAAACCTAATTGACGTGAGAAATTT
TTCGCCCACAAAGAGCGATCGTATGTGTCTTATTGAAATAACTGATTTCT
TATTTCAGTGAAGAAAATGGTGGATTTGGAGCACCCAAAGAAACTGAAGA
AACTCCTGCTGAAAACGTCGAACAAACTCCAGAAACTGagtaagaatgtt
tttttttcattggcatATGCATTGTTTTTTCTCCTAAATGAAATGCGTTT
TCAAAGGTACTGAAGCACTCCAATATTTCTAATTCCCAGTGGAAATTCCT
AGCACAATATTGTTAGGATAACAGTTTACTGAATACTGACTGATTTATAA
TTAAATAATGGTAATGTTATGAGAGATTTAAAGTCTAATGGTGATGGCAT
TCATAAATTGTGcaaggttttcaaaaacagcaaaaaaaagaaatttggat
atcctgtttaaaaataactctttttaaacaaaacttcacaatattggtTC
TAAAGGTGATATAAGtaggttgaaatttttttttttgtaaaatggtCCAA
AATTGCAGCACAAATCTAGAAAAacactatgttgataaaacagcagccac
aaatttgttcaatgagtaaaaaaaatcatttttttcagatgaaactcgta
gcaaaagggcattatccacaaaatatcaaaaatggaaccaaaattattgg
gctagaattgcggctcaaagttgacgattttttcatatatgatatgcttt
gattgaagccacattttaagcccattgaaaaccctgcagccacaaattaa
acccataagtatcttcatcagaccttaaactaccaatttcaagaaaaacg
gttaaaaaatattgaagtcataaagcaggacagcacatataaNacgttaa
taagacgtacctagtaaaatggtatcaaaaatgaggaattcagtgaaaaa
attgccaaatttggcattttttgggtggtatacaccaattttgagggtaa
aatcNTTAAATGGGACTTTTTCTGTACCTCCTTGGTAGATGATGTCTATT
ATCCAATCATTTGTCATCGTCATCAATTTCCAGGCCTTTCCACAAATAAA
ATCGATGAATTGATCTTGTACAtgatttgacaaattttttacCAAATCAC
TTGCGTCAATCAAATTTTGCGTGCGCAAATTAaccaaaatattataaaat
aacccaaaaatatttttgatgtaaTGGTATGGATTCTTGCCTTATCTATA
TCATAGTGTGTGTTTTGATTACAAAAAATATACAGTGGAATTTCTCCATT
TCCACTACCCTTTAACTCAAACATGTCTGTCTACTCAAACATTACAGGAT
GCTAAAagtgtttaatttttctatttaaaCCTTTGTTAATtaaaccattt
ttaaaaagtctaTCATTCCCATTTTCAATTGAGCTTATCAGCTGCGAGAT
CACCCTTAAACAAAGATAACTTTATTATGATAGAAACCTAATTGACGTGA
GAAATTTTTCGCCCACAAAGAGCGATCGTATGTGTCTTATTGAAATAACT
GATTTCTTATTTCAGTGAAGAAAATGGTGGATTTGGAGCACCCAAAGAAA
CTGAAGAAACTCCTGCTGAAAACGTCGAACAAACTCCAGAAACTGagtaa
gaatgtttttttttcattggcatATGCATTGTTTTTTCTCCTAAATGAAA
TGCGTTTTCAAAGGTACTGAAGCACTCCAATATTTCTAATTCCCAGTGGA
AATTCCTAGCACAATATTGTTAGGATAACAGTTTACTGAATACTGACTGA
TTTATAATTAAATAATGGTAATGTTATGAGAGATTTAAAGTCTAATGGTG
ATGGCATTCATAAATTGTGcaaggttttcaaaaacagcaaaaaaaagaaa
tttggatatcctgtttaaaaataactctttttaaacaaaacttcacaata
ttggtTCTAAAGGTGATATAAGtaggttgaaatttttttttttgtaaaat
ggtCCAAAATTGCAGCACAAATCTAGAAAAacactatgttgataaaacag
cagccacaaatttgttcaatgagtaaaaaaaatcatttttttcagatgaa
actcgtagcaaaagggcattatccacaaaatatcaaaaatggaaccaaaa
ttattgggctagaattgcggctcaaagttgacgattttttcatatatgat
atgctttgattgaagccacattttaagcccattgaaaaccctgcagccac
aaattaaacccataagtatcttcatcagaccttaaactaccaatttcaag
aaaaacggttaaaaaatattgaagtcataaagcaggacagcacatataag
ccaacaCGTTGAGTGAGCCACAGTGACATACAGCCACAAAACCTGCCCTC
ACTTTGCcatcttatatttcaagacTGAATCACTCAACTTCAAAGAGNNN
NNNNNNNNNNNNNNtagtacactatggaataactgcaagggtggtggtgt
ctgaagaaaatgtccaaaattgcagttactccacatagtgtcaaggagta
actgcaagacccccccctgACAAGAATGTTAACGCTGTGGtctaaaaagt
ggctgtgatttaaaacctcatttttggggatgggctggagtttttataag
agacttcactaattggttatttgaagtaatagagatgacgcgttctttag
aaaaagtaacaaaattgttttattacaggttaatgACCANGGAATTTTGT
ACTGCCTTAAGGGAACTTCTTTTGGCTAGCGGCGAAAATCTTAAACAATT
TTACTTTTGGCGAAtggtgaattttttattttggcgggaactaattttgg
cgaatgacagcgtaaacctgttctattttgccttactTTGAgcaattttg
gcgggaactaatttaagcaaattttgcccaaattcaccaaaattagttcc
cgcgaaaataaaaataagttccTTTAATACACAGCAGCCACAAGAacagg
gggggtcatgcagttattatataaacactatgacaattactaccgtggtg
gtatataaaccaaaatttgggaaaacagttactccNgagagcttgtaaaa
actccagcttgtccccacTTTTTGAGGTTCTATTTTTTAATGCAATCTGG
TTGAATTAAGAATTCCCCCAAAAATCATCACATCAGATTTTGATTATGGA
TAGGATTAGGCCTTGGAGGCCAGGGCTTAGAGGTCCTAAATGAAATGCat
gctttcttttttttgtttcatgggacaaaatgGTGTGGTGACACGAGAAA
TCGTTTCATGTTccattgcaccaacgcaaaaaaacttcttgtgtcTCAAT
TCAGCACATAGCTTATTGTTATTGATTTGTTTATCTTAATTCTAGAGAAA
CGCCTGAAGTAGAGCCAGTTGATGAAGGGCCACAAGAAATGACATTAGAA
GAATACAGAAAACAACAAGAATCAAGGAAACAACCTGAATTCAATTTGCG
TAAAGTTGAATCAGACAAGAAAGGACTTAAACCATTGAAGAAACCAACTG
AAAAAGACAATGAATCGTCAAGCTCATTCTTCTTCCCAAGAAAGGTaagc
tttttgctgattttttttccttttgatgAGAAAAAGGTATCGaggtttaa
ccctattcggactaggggggggggctctttctgttcggaggtcaaactat
tggtaatagctcctgaaataatagaacttttgccttgaaattttctgtaa
attcctaatttttatttagcttcaaaataaaaaaaaatttgacacctaaa
aattttcacaccttgagtatgatgacatttctgacagtaaggtgtcacaa
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacaaaaat
tgacacttttccaatacaaatttatttttaatgtcaaatatatcgtttaa
accgtaatttattgaatatttaggataaaataagcattttaaactgagac
aacttttttctaaagcttttgttagaatacaatagctatttataagaaca
aaggaaatttttggtttttgttcactttgggcatgatgagtgacgtcatc
aaaaattcttgtgtgtcaaatttcatccaaaaagacccactagatcaaaa
gttaaggggtggtacaggaaaagcccccccagCCCCCGCCcttaaaagcc
taggttgaatagggttaaaggacGGGTAAGATTTTCTTTGGCTTAGAGTG
TTTAAAATACATTGTGGTATTGAGCTTCTCAAAAGGGCGAATGATTTTAC
AAAACATCAATGAACTTGTTTCTCTCCTCTCAGAATGTCCAAGAAACCTA
CAAGTCATCTGGTCGCGTCAAGGAAAACTTAAACGTGAACATCCGTTACG
GAAGTGGTGATAACCGTCATTATGATGCTTCTCGACGTGGACGCGGTCGT
GGTGGTCGACGTGGTGGACGTAGAGACGGCGAAGGAAACGCAAAGGACGC
AACAGGTTACGCTTTGACGAACAATGAGGAATTTCCATCATTGTAAACGT
TGGCAGCGTTCGCCGTCCAACGCCTTTGACAGGTTTTAGTTACCTGGATT
CATTACTTTTGGATTtcttaaacaaaatctttcgcCGCAAACAAACCATC
AATAAAATCAATAGCTTTATAAAAAAAGACTATACACATAGAGTGTAACC
AGAAACTTTAACAACTATCTGGAATCAAAgcactttgtttattttttgta
ataGAACTGGTATTACAAAATGCTTCGTGTTTTTTAATTAAGATACGCAG
GACAGTATTTTTAGTTTGGTAGACAACATCTTTGGGATTGGAGAGATCAC
GTCGTCGAACCCCTTGTAAATATAATTTGCCATAACACTCCTCATCTCTC
GCTTGtcacgtgattttttttaaatactgaaACAAAGTCTTTGGATAAAC
TTaaacattttcatattttctggtaccttaagggaactaattttcgcggt
tctAGAGGCTagagtctatttcaaattagctaaataacttttgatagaat
ttgaatcaagtAGCGATTTTATGttcgttgaaaagacaaacaggagtggg
aTATTGTCATAAAGAAGAAACGCAAAAAGATCGGAAAATGAGGAAAATCt
gcttttttaaaataattgcGCTATAATGatcattttcacacgagtgattc
tttgatcgTAGAACATCATTATtcaaaagtcatcaaaaaacgacaaaaag
agCCCTTTTTAAGTCAACTAGGGCACTGTTTTAGGGTgtagtttttttct
tcttttttatttttcacctttgttttcctttttttttttcatttttggta
atattccactccggattatctttttaacgaccACAAAACCACTAACTAAt
gcaaattctatcaaaagttattaatttcgcttagcgaaagtattacgata
gcctttctgcggcggcggcgcgtattttttttccgtcagcggtCTAAACC
CAACTTCAGCGGTCGAAACCCAGCTTAGCGGTCGAAGCCCAACCTAACGG
CCGAAACCCATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038527XLOC_038527Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061409-exon-scaffold_358-1491911889:639000..639356TCONS_00061409-exon-scaffold_358-1491911889:639000..639356Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1510915933:639000..639356TCONS_00061409-exon-scaffold_358-1510915933:639000..639356Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1575043694:639000..639356TCONS_00061409-exon-scaffold_358-1575043694:639000..639356Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1491911889:646397..646705TCONS_00061409-exon-scaffold_358-1491911889:646397..646705Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1510915933:646397..646705TCONS_00061409-exon-scaffold_358-1510915933:646397..646705Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1575043694:646397..646705TCONS_00061409-exon-scaffold_358-1575043694:646397..646705Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1491911889:647527..647599TCONS_00061409-exon-scaffold_358-1491911889:647527..647599Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1510915933:647527..647599TCONS_00061409-exon-scaffold_358-1510915933:647527..647599Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1575043694:647527..647599TCONS_00061409-exon-scaffold_358-1575043694:647527..647599Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1491911889:647984..648064TCONS_00061409-exon-scaffold_358-1491911889:647984..648064Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1510915933:647984..648064TCONS_00061409-exon-scaffold_358-1510915933:647984..648064Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1575043694:647984..648064TCONS_00061409-exon-scaffold_358-1575043694:647984..648064Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1491911889:648658..648738TCONS_00061409-exon-scaffold_358-1491911889:648658..648738Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1510915933:648658..648738TCONS_00061409-exon-scaffold_358-1510915933:648658..648738Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1575043694:648658..648738TCONS_00061409-exon-scaffold_358-1575043694:648658..648738Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1491911889:651945..652143TCONS_00061409-exon-scaffold_358-1491911889:651945..652143Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1510915933:651945..652143TCONS_00061409-exon-scaffold_358-1510915933:651945..652143Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1575043694:651945..652143TCONS_00061409-exon-scaffold_358-1575043694:651945..652143Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1491911889:652983..654213TCONS_00061409-exon-scaffold_358-1491911889:652983..654213Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1510915933:652983..654213TCONS_00061409-exon-scaffold_358-1510915933:652983..654213Clytia hemisphaericaexon
TCONS_00061409-exon-scaffold_358-1575043694:652983..654213TCONS_00061409-exon-scaffold_358-1575043694:652983..654213Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_358supercontigscaffold_358:639000..654213 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
432.855	440.453	544.473	411.424	156.767	52.9423	323.201	221.331	461.429	484.269	530.156	500.361	683.025	552.216	1031.23	1099.59	854.107	1100.6	571.833	660.016	905.259	930.069	439.172	431.655	91.8756	212.452	581.052	711.31	495.763	485.949
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061409 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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