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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061634 ID=TCONS_00061634|Name=TCONS_00061634|organism=Clytia hemisphaerica|type=transcript|length=771bp
aggtacGAAAAAACTCGGaatggttttagggtggtaaaatggacaaaaaa
aatgcccgcgcggtatttggtggctacggtcggaAAGGTGTATTTCTTCT
AAGATAAATCTGCATTCATACGATCATAATCCTTAATCTGACCTATGGGT
TATTGCAAAGTCATCAAATCCTATATTATGTCATATAgaaaatttaccca
aaatagTTGTTCCAGGTTGTTGAGTTGTTACTGGAGCTTGAGTTGTTACT
GGAGCTTGAGTTGTTACTGGAGCTTGAGTTGTTACTGGAAGTCGAGTTGT
TACTGGTAGTCGAGTTGTTAATGGGAGTCGAGTTGTTAATGGGATTCGAG
TTGTTACTGGGAGTCGAGTTGTTACTGGGAGTCGAGTTGTTACTGGGAGT
CGAGTTGTTACTGGAGCTTGAGTGGTTTCCGGAGCTTGAGTGGTTTCCGG
AGCTTGAGTGGTTTCCGGAGCTTGAGTGGTTTCTGGAGCTTGGGTTGTTT
CAGGAGATCGGGTTGTTTCAGGAGCTTGGGTTGTTTCGGGGGCTTGAGTG
GTTTCGGGGGCTTGGGTTGTTTCAGGGGCTTGAGTGGTTTCAGGGGCTTG
AGTGGTTTCCGGAGCTTGAGTGGTTTCCGGAGCTTGAGTTGTTTCAGGGG
CTTGAGTAGTTTCTGGGACAGTCGTGGTTTCGGGGGCAGTGGTGGTTTCT
GGAGCTTCAGTAGTTGTCGGAATGGGTGTTGTTTGTGGTGCTGGAGCTTG
AGTGGTCGGTGTGTTATCTTC Run BLAST on NCBI transcript from alignment at scaffold_36:1373591..1374829+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061634 ID=TCONS_00061634|Name=TCONS_00061634|organism=Clytia hemisphaerica|type=transcript|length=1239bp|location=Sequence derived from alignment at scaffold_36:1373591..1374829+ (Clytia hemisphaerica)
aggtacGAAAAAACTCGGaatggttttagggtggtaaaatggacaaaaaa
aatgcccgcgcggtatttggtggctacggtcggaAAGGTGTATTTCTTCT
AAGATAAATCTGCATTCATACGATCATAATCCTTAATCTGACCTATGGGT
TATTGCAAAGTCATCAAATCCTATATTATGTCATATAgaaaatttaccca
aaatagTTGTTCCAGGTTGTTGAGTTGTTACTGGAGCTTGAGTTGTTACT
GGAGCTTGAGTTGTTACTGGAGCTTGAGTTGTTACTGGAAGTCGAGTTGT
TACTGGTAGTCGAGTTGTTAATGGGAGTCGAGTTGTTAATGGGATTCGAG
TTGTTACTGGGAGTCGAGTTGTTACTGGGAGTCGAGTTGTTACTGGGAGT
CGAGTTGTTACTGGAGCTTGAGTTGTTACTGGAGCTTGAGTTGTTACTGG
AGCTTGAGTTGTTACTGGAGCTTGAGTTGTTACTGGAGCTTGAGTGGTTT
CTGGAGCTTGAGTGGTTTCTGGAGCTTGAGTGGTTTCTGGAGCTTGAGTG
GTTTCCGGAGCTTGAGTGGTTTCCGAAGTTTGATTGGTTTCCGGAGCTTG
AGTGGTTTCTGGAGCTCGGGTTGTTTCAGGAGCTTGGGTTGTTTCAGGAG
CTTGGGTTGTTTCGGGGGCTTGGGTTGTTTCAGGGGCTTGAGTGGTTTCA
GGGGCTTGAGTGGTTTCCGGAGCTTGAGTGGTTTCTGGAGCTTGAGTGGT
TTCTGGAGCTTGGGTTGTTTCAGGAGATTGGGTTGTTTCAGGAGATCGGG
TTGTTTCGGGAGCTTGGGTTGTTTCGGGGGCTTGAGTGGTTTCGGGGGCT
TGAGTTGTTTCAGGGGCTTGAGTGGTTTCAGAGGCTTGAGTGGTTTCCGG
AGCTTGAGTGGTTTCCGGAGCTTGAGTGGTTTCCGGAGCTTGAGTGGTTT
CTGGAGCTTGGGTTGTTTCAGGAGATCGGGTTGTTTCAGGAGCTTGGGTT
GTTTCGGGGGCTTGAGTGGTTTCGGGGGCTTGGGTTGTTTCAGGGGCTTG
AGTGGTTTCAGGGGCTTGAGTGGTTTCCGGAGCTTGAGTGGTTTCCGGAG
CTTGAGTTGTTTCAGGGGCTTGAGTAGTTTCTGGGACAGTCGTGGTTTCG
GGGGCAGTGGTGGTTTCTGGAGCTTCAGTAGTTGTCGGAATGGGTGTTGT
TTGTGGTGCTGGAGCTTGAGTGGTCGGTGTGTTATCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061634-exon-scaffold_36-1491911889:1373591..1374005 | TCONS_00061634-exon-scaffold_36-1491911889:1373591..1374005 | Clytia hemisphaerica | exon |
| TCONS_00061634-exon-scaffold_36-1510915933:1373591..1374005 | TCONS_00061634-exon-scaffold_36-1510915933:1373591..1374005 | Clytia hemisphaerica | exon |
| TCONS_00061634-exon-scaffold_36-1575043694:1373591..1374005 | TCONS_00061634-exon-scaffold_36-1575043694:1373591..1374005 | Clytia hemisphaerica | exon |
| TCONS_00061634-exon-scaffold_36-1491911889:1374474..1374829 | TCONS_00061634-exon-scaffold_36-1491911889:1374474..1374829 | Clytia hemisphaerica | exon |
| TCONS_00061634-exon-scaffold_36-1510915933:1374474..1374829 | TCONS_00061634-exon-scaffold_36-1510915933:1374474..1374829 | Clytia hemisphaerica | exon |
| TCONS_00061634-exon-scaffold_36-1575043694:1374474..1374829 | TCONS_00061634-exon-scaffold_36-1575043694:1374474..1374829 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:1373591..1374829 + |
Blast
The following BLAST results are available for this feature:
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