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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061716 ID=TCONS_00061716|Name=TCONS_00061716|organism=Clytia hemisphaerica|type=transcript|length=1477bp
tcttatattttttacgCCGTATTTTGACGAGACGTATAGGATTTagtgat
ttctttattttttgaatggtatattttttgaaagctaGTGGGAAATTTTA
GTTTCTATCTGTTATTGGTAGAAAAaacaggcgggtcgctcaaggccgta
CAACTTTGGTGGGATGGGAAGGCTTCAAATCCCACTGCACTAAGGAGATC
CAATTTAAGCCCCTCGGGCTTACTTCATTGATCAGTCCCAACTTAGGGCT
GTTTTTAAGAGTGAAATGCATGCAGGGATTGgatttgtttcaaaataatc
aCACAGGTGTGTTTGAAAGNttctgattagtagtttgtgggcatcGTTCT
AACTCGAcaaactcatctttcacatcttttaatctcttaagccggagctt
ccagcgcagctggtttatttgtgTTAATTTCAAATTGTAAAAACTTCATG
ACTGTTAAATACTTAAGACTAATTATATTTGTGTAATTAATAAAGTAGTT
TGATTTAGCGGTTCAAATTTCTGCCATGCTGGAAAAACGGACAAATGATG
TCAATTGCNTTCGAACTCAAAATGGTGGCCGTTTCAGATGAAATTTCAGC
AAGAGTGAAGCAAATCTGCAAGAATGTTCAAAataccaaccaaatcaaag
aaGTTTTAGAAGAGTTGAAAACTGGAGATGCAGAAATAATCGAGGAAAGT
ATTGATATACTTTTTGGTGTGTTTAGCTATCATATTGTTAAGAAAACATG
GCTTNATATTTtgtattccgcggaatatgattatatattttttttccata
atcacctataatcagcaatcggctacctttcccggggtgttgtttgagat
tttatgtttgagtgtTTCCCTTAGATATAACTAAGATATAATTGGCTGTA
TATGGAGGGCTGTAGNGCACAAGTTTGAGAGAAGACTGTTAAAATTCGGC
CTATTATATTTTTGTCTCTTCGGGGGAGAGGCACGAAGAAGTGAACTGTA
TCTATATTTGCACTAGCATGCCTACATTTACTCATATATTACTGATAGTG
TATAATATCATAAAAGATGCTAACTAAGTTTTCCAATCAGCTGAATGATG
AAAGAGATTGATTGAAACACTGCGTGGTCGAAACTCGGAACTCTTGTGAA
CAATATCCCATAACCACAAAACGATGATTGTAGATTTgcacatgaaaaaa
taaaaataaattaattaaagTTAAAGATAAACATTAATCAGTCCCAAAAT
GAAGTATAAgctgaatctttaacctttctcaggcaagaaaaagtgaattc
ttatattttttacgCCGTATTTTGACGAGANAAAACTTGTCAGTTTAGAA
AATGACCACTTTTGGAAAGGAGAATTTGATGTCGAAAGAAAACTCTTGAC
ACGGTTTGATGTCCTTTTTAATCAGCTTCTTGACACAAATTTTACAGAAG
AGCTTGCAGGCTATATGAATGAATTNT Run BLAST on NCBI transcript from alignment at scaffold_36:271387..272863 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061716 ID=TCONS_00061716|Name=TCONS_00061716|organism=Clytia hemisphaerica|type=transcript|length=1477bp|location=Sequence derived from alignment at scaffold_36:271387..272863 (Clytia hemisphaerica)
ANAATTCATTCATATAGCCTGCAAGCTCTTCTGTAAAATTTGTGTCAAGA
AGCTGATTAAAAAGGACATCAAACCGTGTCAAGAGTTTTCTTTCGACATC
AAATTCTCCTTTCCAAAAGTGGTCATTTTCTAAACTGACAAGTTTTNTCT
CGTCAAAATACGGcgtaaaaaatataagaattcactttttcttgcctgag
aaaggttaaagattcagcTTATACTTCATTTTGGGACTGATTAATGTTTA
TCTTTAActttaattaatttatttttattttttcatgtgcAAATCTACAA
TCATCGTTTTGTGGTTATGGGATATTGTTCACAAGAGTTCCGAGTTTCGA
CCACGCAGTGTTTCAATCAATCTCTTTCATCATTCAGCTGATTGGAAAAC
TTAGTTAGCATCTTTTATGATATTATACACTATCAGTAATATATGAGTAA
ATGTAGGCATGCTAGTGCAAATATAGATACAGTTCACTTCTTCGTGCCTC
TCCCCCGAAGAGACAAAAATATAATAGGCCGAATTTTAACAGTCTTCTCT
CAAACTTGTGCNCTACAGCCCTCCATATACAGCCAATTATATCTTAGTTA
TATCTAAGGGAAacactcaaacataaaatctcaaacaacaccccgggaaa
ggtagccgattgctgattataggtgattatggaaaaaaaatatataatca
tattccgcggaatacaAAATATNAAGCCATGTTTTCTTAACAATATGATA
GCTAAACACACCAAAAAGTATATCAATACTTTCCTCGATTATTTCTGCAT
CTCCAGTTTTCAACTCTTCTAAAACttctttgatttggttggtatTTTGA
ACATTCTTGCAGATTTGCTTCACTCTTGCTGAAATTTCATCTGAAACGGC
CACCATTTTGAGTTCGAANGCAATTGACATCATTTGTCCGTTTTTCCAGC
ATGGCAGAAATTTGAACCGCTAAATCAAACTACTTTATTAATTACACAAA
TATAATTAGTCTTAAGTATTTAACAGTCATGAAGTTTTTACAATTTGAAA
TTAAcacaaataaaccagctgcgctggaagctccggcttaagagattaaa
agatgtgaaagatgagtttgTCGAGTTAGAACgatgcccacaaactacta
atcagaaNCTTTCAAACACACCTGTGtgattattttgaaacaaatcCAAT
CCCTGCATGCATTTCACTCTTAAAAACAGCCCTAAGTTGGGACTGATCAA
TGAAGTAAGCCCGAGGGGCTTAAATTGGATCTCCTTAGTGCAGTGGGATT
TGAAGCCTTCCCATCCCACCAAAGTTGtacggccttgagcgacccgcctg
ttTTTTCTACCAATAACAGATAGAAACTAAAATTTCCCACtagctttcaa
aaaatataccattcaaaaaataaagaaatcactAAATCCTATACGTCTCG
TCAAAATACGGcgtaaaaaatataaga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061716-exon-scaffold_36-1491911889:271387..272863 | TCONS_00061716-exon-scaffold_36-1491911889:271387..272863 | Clytia hemisphaerica | exon |
| TCONS_00061716-exon-scaffold_36-1510915933:271387..272863 | TCONS_00061716-exon-scaffold_36-1510915933:271387..272863 | Clytia hemisphaerica | exon |
| TCONS_00061716-exon-scaffold_36-1575043694:271387..272863 | TCONS_00061716-exon-scaffold_36-1575043694:271387..272863 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:271387..272863 . |
Blast
The following BLAST results are available for this feature:
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