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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00061734 ID=TCONS_00061734|Name=TCONS_00061734|organism=Clytia hemisphaerica|type=transcript|length=1137bp
CCCTTCTAAGCTCTGGCCAGGTAATATAAAAGCAAGTAATATAATAAAAG
ATGACAAGACTTAAAAATAAACGAGAGTATATTATAATTTAACGTGGCTA
CATATGAATTGTGAggaagttgttgttttttttatatcgTCACAACAGAG
AAAATGTTTATAATGATAATACATGACGTCATATAATCCTTGCTTTAATA
GTAACATAGTTGACATTGTAACATCAGGAGATTTATTGAAATTATTGTAC
AGTATTACAGAGTATTATgctgaataaaaagaaaaggaaataacattgat
aatttcaaaaaaagtatGCTACTGAGTgttatttttatgatattttaagc
TTAATTTAAAACTGCACACTgtagttttcttttgattttggaaACCATAT
TTGATAGTTATCCATCACTTACCAATCATAGATCCCTGTTCACCAGAATT
GATTAATCACACTGAAATTTCAGTAACACAGCATAATTAAAGTCAACATT
AGAGGGAATGTATCCATACCACAATCTCATTTTTGAAAGAGTTAAAACTA
AATTCCATGCCTAAATTATACTATGAActcattgtttttatgaaatCTTG
ACAATATCCTTGTCGGCTTGATACATCTTTGCAGGCTTTGCCTCTTCAGG
GCCTCCATTATCAACACTGTAATACtaaaaaaaattgggtttgaGTCTAA
CCATTTTGATTATTTATGCCAGTGATAGTTTCATTCAAATAGATTAAATA
TTTTGGCACCACTCCATCCTCTGGTAAACTCAGACGCTATCCCCATTCAT
GTAACTTTTAGTACAAGTGTATTTGAAATGATCGGATCTCATCCCCAGTA
TCATAACGTAAACCCACTCATCACTGGCATCACTTTCTTCCTGGACCATT
TGGGATTATGGCCAtacaaaattgctatttttcttAATTCCtcactcaaa
ataaaatcatttttcatcaaattgagATCTTGTTCTTGCAACATAAACTC
TTCAATTTTCAACCGCAAGTTATTCGATTCTGAAACTAGTANAACAAAAT
ATATGCCAAGAAgacaaactattttcaaatcACTAAGAAGCCATTTCCTA
tacaatcaaatacaatataaTTCAAATCCCTTCTAAG Run BLAST on NCBI transcript from alignment at scaffold_36:675008..676144 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00061734 ID=TCONS_00061734|Name=TCONS_00061734|organism=Clytia hemisphaerica|type=transcript|length=1137bp|location=Sequence derived from alignment at scaffold_36:675008..676144 (Clytia hemisphaerica)
CTTAGAAGGGATTTGAAttatattgtatttgattgtaTAGGAAATGGCTT
CTTAGTgatttgaaaatagtttgtcTTCTTGGCATATATTTTGTTNTACT
AGTTTCAGAATCGAATAACTTGCGGTTGAAAATTGAAGAGTTTATGTTGC
AAGAACAAGATctcaatttgatgaaaaatgattttattttgagtgaGGAA
TTaagaaaaatagcaattttgtaTGGCCATAATCCCAAATGGTCCAGGAA
GAAAGTGATGCCAGTGATGAGTGGGTTTACGTTATGATACTGGGGATGAG
ATCCGATCATTTCAAATACACTTGTACTAAAAGTTACATGAATGGGGATA
GCGTCTGAGTTTACCAGAGGATGGAGTGGTGCCAAAATATTTAATCTATT
TGAATGAAACTATCACTGGCATAAATAATCAAAATGGTTAGACtcaaacc
caattttttttaGTATTACAGTGTTGATAATGGAGGCCCTGAAGAGGCAA
AGCCTGCAAAGATGTATCAAGCCGACAAGGATATTGTCAAGatttcataa
aaacaatgagTTCATAGTATAATTTAGGCATGGAATTTAGTTTTAACTCT
TTCAAAAATGAGATTGTGGTATGGATACATTCCCTCTAATGTTGACTTTA
ATTATGCTGTGTTACTGAAATTTCAGTGTGATTAATCAATTCTGGTGAAC
AGGGATCTATGATTGGTAAGTGATGGATAACTATCAAATATGGTttccaa
aatcaaaagaaaactacAGTGTGCAGTTTTAAATTAAgcttaaaatatca
taaaaataacACTCAGTAGCatactttttttgaaattatcaatgttattt
ccttttctttttattcagcATAATACTCTGTAATACTGTACAATAATTTC
AATAAATCTCCTGATGTTACAATGTCAACTATGTTACTATTAAAGCAAGG
ATTATATGACGTCATGTATTATCATTATAAACATTTTCTCTGTTGTGAcg
atataaaaaaaacaacaacttccTCACAATTCATATGTAGCCACGTTAAA
TTATAATATACTCTCGTTTATTTTTAAGTCTTGTCATCTTTTATTATATT
ACTTGCTTTTATATTACCTGGCCAGAGCTTAGAAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00061734-exon-scaffold_36-1491911889:675008..676144 | TCONS_00061734-exon-scaffold_36-1491911889:675008..676144 | Clytia hemisphaerica | exon |
| TCONS_00061734-exon-scaffold_36-1510915933:675008..676144 | TCONS_00061734-exon-scaffold_36-1510915933:675008..676144 | Clytia hemisphaerica | exon |
| TCONS_00061734-exon-scaffold_36-1575043694:675008..676144 | TCONS_00061734-exon-scaffold_36-1575043694:675008..676144 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_36 | supercontig | scaffold_36:675008..676144 . |
Blast
The following BLAST results are available for this feature:
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