TCONS_00061781 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061781
Unique NameTCONS_00061781
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3170

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061781 ID=TCONS_00061781|Name=TCONS_00061781|organism=Clytia hemisphaerica|type=transcript|length=3170bp
TGATTCCATTTCCAACTTATAAGAAGGATCCAAGAGGCAGACACAACTGG
AAAAAACTCATCAAACGTGTCAATGCTGACAAATCGGAATTGGAACCCGG
ACATCAAGCAAGAGTATGCTCAATTCATTTTGTAGATGGTAAAAAGACAG
CTGAAAATCCAAACCCTGTATTGAAATTGGGCTATCCAGACTACTTGATc
ccaaaagaatttttgaagaCTGGAAGACGTACCCTTTCTTACAAATCCAA
CCGAACTAAGAACCACCTCCATCAAGAGAAAAGGATTCAACAAATAATGA
TCTTCCCTCTTCTGTTTCGTCAAATGATACAACAATCTACCACAATCAGT
TTATGGAAATTGAGTCTGATTTAGAAATAGATGATGTCACAATGGAAGTG
GAATTTGAATCTCAGCCAAcagaattgttttgaaaaaatctacttgagcc
atcttttacctatgatggtaccctactttcatgcaaaaaatcagaaaaag
ttaatgatccaatttttcacaagtccaaaaaaaccgttcCCTAAATGTTT
ACTCCCTTTTCTTTAGGTTGGCAGTTCGTAAACACTGTGCTTGATAGTGG
AACattcagtggtttcatttccaaAGTGACCTACAACTACGAGCTTGCAT
CCTCTCCACGTCCGTTTATGTTGCTTCAAACGTTCATCAAGTGGTTTTTT
GGATGGGCTTCTGCAATGAACATTGATTTTCGTATGGGTTGTAAAGGCTG
CGGTGAGAATCCCAAGGTAAAGATCCAAAACTATCTGTTTTTTGTAGTTT
AGATACGCTGCACAAATAACATGACCAAAAGTGTTGCCTTCAATATTGAT
GTGGAAATTTACTGTAACCAACTTCTGATTCACAATTTCTTTATTGCTTA
GGTATTGGCATGTGACGGAACCAAAATTGGTACTAACTTCAAAAACGTGT
TTGTCACTCCAATTGAGAAGCCAAGTTATGACCATCCCACGGAGACTCTT
GGTTCTATGGATCACTGCCCGTTGAAAAATCAGTTAGCAAGAACAGCATT
TGCAGAATTAGTTGATCAGGATACGACTGAGCACTTTGAGGCCATCCCTG
GCGAGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCAT
CTTAAAAAGGCTTACTCTAATGTTTACAAACAACTGTCAAGAACATCTTC
CGTCGACacaaaaattcataaagaatcaaagagccaatctcgagaaaagc
taatacctaagtaagtgataatgtgcttataaataaatatcgaatttggc
cagtttttttaaaaaaaaccgtcaagcaaccaaaatttcatgtctaaaca
aacaaattcttcaaaagtaagccctcatgagcaaagaaaacatctatctc
ataaaaaaaattgagtaatttaactaagaacattgatgtatgcttattaa
tagttattcttatagataaacatgcattttttgagccagaaaattttttt
tggaaaaatctgcttgagccatcttttacctatgatggtaccctttcatg
caaaaaatcagaaaaagttaatgatccaatttttcacaagtccaaaaaaa
ccgttcCCTAAATATTTACTCCCTTTTCTTTAGGTTGGCAGTTCGTAAAC
ACTGTACTTGATAGTGGAACattcagtggtttcatttccaaAATGACCTA
CAACTACGAGCTTGAATCCTCTCCACGTCCGTTCATGTTGCTTCAAACGT
TCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAACATTGATTTTCGG
ATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTATTGGCATGTGACGG
AACCAAAATTGGTACTAACTTCAAAAACGTGTTTGTCACTCCGATTGAGA
AGCCAAGTTATGACCATCCCACGGAGACTCTTGGTTCTATGGATCACTGC
CCGTTGAAAAATCAGTTAGCAAGAACAGCATTTGCAGAATTAGTTGATCA
GGATACGACTGAGCACTTTGAGGCCATCCCTGGCGAGTTAAAACCTTTTG
CTTCTCAAAGAAATGAAACAGATGTTGACCATCTTAAAAAGGCTTACTCT
AATGTTTACAAACAACTGTCAAGAACATCTTCCGTCGAcacaaaaaatca
taaagaatcaaagagccaatctcgagaaaagctaatacctaagtaagtga
taatgtgcttataaataaatatcgaatttagccagtttttctataaaaac
acgtcaagcaaccaaaatttcatgtctaaacaaacacattcttcaaaagt
aagccctcatgagcaaagaaaacatctatctcataaaataattgagtaat
ttaaccaagaacattgatgtatgcatATTAATAgttattcttatagataa
acatgcgttttttgagccaaaaaattctttttggaaaaatctgcttgagc
catcttttacctatgatggtaccctattttcatgcaaaaaatcagaaaaa
gttaatgatccaatttttcacaagtacaaaaaaccgttttttagccgttt
tttggcccaaatttgcccaaaatcgggctccgtcacatttgaaggtttat
agttacacatctttgtgcaaagaatcaatcacgaggaaagctaataacga
acgaacggacgaacgaacggacaaaggttaatttataggacctccacccc
accggggcaGGTCCAAAAAGATTATGACGATGCCAATGAAGAACAGTATG
ACTTTTTAATAGCATTTACCGGTATATAATAGATTCTTGATTGCCGGAAC
CATAGAGAACATAGAAACATAGAAATAAAGGAAAATAGTAACTTATCATT
ACTAGAGCCGTTTACTGTTTCTGTGCTTTTATTAGAAGTGATTCCAGTCT
TTTTATGATCACGACTTGCAGACTTCGTACGGgattttttttcgttcttt
gaATGTGCTAGTAATGGATTTCGGTATTTTTGGTACACAAagatgaatta
gaaaaaagaaaactcaCAATATATGGAAACAAAAAATGACATGCAGGAAC
GGTTGAAAGAATCGGCTACTCTGAATACTCGTAGAGAAAGGTCAGCAAAA
TTAACTTAAGATGATTTTTTCAACTAATATAATTGAGTTTAAGAAATTAA
TCACAAAGTTCGAGGACCTA
Run BLAST on NCBI

protein sequence of TCONS_00061781-protein

>TCONS_00061781-protein ID=TCONS_00061781-protein|Name=TCONS_00061781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=167bp
MTYNYELESSPRPFMLLQTFIKWFFGWASAMNIDFRMGCKGCGENPKVLA
CDGTKIGTNFKNVFVTPIEKPSYDHPTETLGSMDHCPLKNQLARTAFAEL
VDQDTTEHFEAIPGELKPFASQRNETDVDHLKKAYSNVYKQLSRTSSVDT
KNHKESKSQSREKLIPK
Run BLAST on NCBI

transcript from alignment at scaffold_360:32524..40049+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061781 ID=TCONS_00061781|Name=TCONS_00061781|organism=Clytia hemisphaerica|type=transcript|length=7526bp|location=Sequence derived from alignment at scaffold_360:32524..40049+ (Clytia hemisphaerica)
TGATTCCATTTCCAACTTATAAGAAGGATCCAAGAGGCAGACACAACTGG AAAAAACTCATCAAACGTGTCAATGCTGACAAATCGGAATTGGAACCCGG ACATCAAGCAAGAGTATGCTCAATTCATTTTGTAGATGGTAAAAAGACAG CTGAAAATCCAAACCCTGTATTGAAATTGGGCTATCCAGACTACTTGATc ccaaaagaatttttgaagaCTGGAAGACGTACCCTTTCTTACAAATCCAA CCGAACTAAGAACCACCTCCATCAAGAGAAAAGGATTCAACAAATAATGA TCTTCCCTCTTCTGTTTCGTCAAATGATACAACAATCTACCACAATCAGT TTATGGAAATTGAGTCTGATTTAGAAATAGATGATGTCACAATGGAAGTG GAATTTGAATCTCAGCCAAcagaattgttttgaaaaaatctacttgagcc atcttttacctatgatggtaccctactttcatgcaaaaaatcagaaaaag ttaatgatccaatttttcacaagtccaaaaaaaccgttcCCTAAATGTTT ACTCCCTTTTCTTTAGGTTGGCAGTTCGTAAACACTGTGCTTGATAGTGG AACattcagtggtttcatttccaaAGTGACCTACAACTACGAGCTTGCAT CCTCTCCACGTCCGTTTATGTTGCTTCAAACGTTCATCAAGTGGTTTTTT GGATGGGCTTCTGCAATGAACATTGATTTTCGTATGGGTTGTAAAGGCTG CGGTGAGAATCCCAAGGTAAAGATCCAAAACTATCTGTTTTTTGTAGTTT AGATACGCTGCACAAATAACATGACCAAAAGTGTTGCCTTCAATATTGAT GTGGAAATTTACTGTAACCAACTTCTGATTCACAATTTCTTTATTGCTTA GGTATTGGCATGTGACGGAACCAAAATTGGTACTAACTTCAAAAACGTGT TTGTCACTCCAATTGAGAAGCCAAGTTATGACCATCCCACGGAGACTCTT GGTTCTATGGATCACTGCCCGTTGAAAAATCAGTTAGCAAGAACAGCATT TGCAGAATTAGTTGATCAGGATACGACTGAGCACTTTGAGGCCATCCCTG GCGAGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCAT CTTAAAAAGGCTTACTCTAATGTTTACAAACAACTGTCAAGAACATCTTC CGTCGACacaaaaattcataaagaatcaaagagccaatctcgagaaaagc taatacctaagtaagtgataatgtgcttataaataaatatcgaatttggc cagtttttttaaaaaaaaccgtcaagcaaccaaaatttcatgtctaaaca aacaaattcttcaaaagtaagccctcatgagcaaagaaaacatctatctc ataaaaaaaattgagtaatttaactaagaacattgatgtatgcttattaa tagttattcttatagataaacatgcattttttgagccagaaaattttttt tggaaaaatctgcttgagccatcttttacctatgatggtaccctttcatg caaaaaatcagaaaaagttaatgatccaatttttcacaagtccaaaaaaa ccgttcCCTAAATATTTACTCCCTTTTCTTTAGGTTGGCAGTTCGTAAAC ACTGTACTTGATAGTGGAACattcagtggtttcatttccaaAATGACCTA CAACTACGAGCTTGAATCCTCTCCACGTCCGTTCATGTTGCTTCAAACGT TCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAACATTGATTTTCGG ATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTAAAGATCCAAAACTA TCTGTTTTTTGTAGTTTAGATACGCTGCACAAATAATATGACCAAAAGTG TTGCCTTCAATATTGATGTGGAAATTTACTGTAACCTAACTTCTGATTCA CAATTTCTTTATTGCTTAGGTATTGGCATGTGACGGAACCAAAATTGGTA CTAACTTCAAAAACGTGTTTGTCACTCCGATTGAGAAGCCAAGTTATGAC CATCCCACGGAGACTCTTGGTTCTATGGATCACTGCCCGTTGAAAAATCA GTTAGCAAGAACAGCATTTGCAGAATTAGTTGATCAGGATACGACTGAGC ACTTTGAGGCCATCCCTGGCGAGTTAAAACCTTTTGCTTCTCAAAGAAAT GAAACAGATGTTGACCATCTTAAAAAGGCTTACTCTAATGTTTACAAACA ACTGTCAAGAACATCTTCCGTCGAcacaaaaaatcataaagaatcaaaga gccaatctcgagaaaagctaatacctaagtaagtgataatgtgcttataa ataaatatcgaatttagccagtttttctataaaaacacgtcaagcaacca aaatttcatgtctaaacaaacacattcttcaaaagtaagccctcatgagc aaagaaaacatctatctcataaaataattgagtaatttaaccaagaacat tgatgtatgcatATTAATAgttattcttatagataaacatgcgttttttg agccaaaaaattctttttggaaaaatctgcttgagccatcttttacctat gatggtaccctattttcatgcaaaaaatcagaaaaagttaatgatccaat ttttcacaagtacaaaaaaccgttttttagccgttttttggcccaaattt gcccaaaatcgggctccgtcacatttgaaggtttatagttacacatcttt gtgcaaagaatcaatcacgaggaaagctaataacgaacgaacggacgaac gaacggacaaaggttaatttataggacctccaccccaccggggcaGGTCC AAAAAGATTATGACGATGCCAATGAAGAACAGTATGACTTTTTAATAGCA TTTACCGGTATATAATAGATTCTTGATTGCCGGAACCATAGAGAACATAG AAACATAGAAATAAAGGAAAATAGTAACTTATCATTACTAGAGCCGTTTA CTGTTTCTGTGCTTTTATTAGAAGTGATTCCAGTCTTTTTATGATCACGA CTTGCAGACTTCGTACGGgattttttttcgttctttgaATGTGCTAGTAA TGGATTTCGGTATTTTTGGTACACAAagatgaattagaaaaaagaaaact caCAATATATGGAAACAAAAAATGACATGCAGGAACGGTTGAAAGAATCG GCTACTCTGAATACTCGTAGAGAAAGGTCAGCAGTATCAACTCAAGATGA TTTTTTCAACTAATATAATTGAGTTTCATCACAAAATTCGAGGCCTTTAA AAAGGGGAAAATTGAAATGGGTTAGCCActtggttgaaaaattaaaattt atttctGAAACATATTTACTTGATTCACATATAGTTAAAACATTGGaatt ttatgatttcaaaagttttccttcAGAAAACCAGCCCATTTTATAGCCTT CTAAACTTGAGGCATTTTTGCTACATTTTGTCACGGACGAAATCAAAAAG GTCAACAAATTAATCAATACAATGTCTGGTAAAGAATTTGCAGAGAAGTT GAAGAATGGATTAGTTGGACCACGTATCAGAACCCACAATTATAAAACAT TTATCTCCAATATTCTGAGCTAAAGCATGTGAAAAAGACACTGGGTAAAA ATTTTGAGCATGTTTCCTCTAACACAATACAACTATGTTTGAACAGGTAG GAGAAGTAGAAACTGCAGGTGGCTTCCCTTCTTTGTTCTAACTAAAAGTT CTTCGTAAACATAGTTAACAGAGAATATTATATTCATCTTAGCAATTACC AATTACAAGAGAAATGCCATCGAATCGAGGACAGTATAACTTGTATGACG TGCCATATGtcgttttattattttcagggaGGGTGTTTCAACATCAATAT TTCTCGACATCTCAAAGTCATATTTTTGCGAAGTCTCAACGTCATTTTTC TCCATATTCCAAAGTCAACTTTTCTCGACATCTCAAAGTCATATTTTGAA GAATGGATTAGTTGGACCACGTATCAGAACCCACaataataacaTTTATC TCCAATATTCTGAGATAAAGCATATGGAAAAGACACTGGATAAAAATGTT GAGTGTGTTCCCTCTAACACAATACAACTAATAATCTAAAGCTCTTCATA TGGAGTAGTTAGAATGTTGAATGATATGTAACAGTTTGCAGTTGCGTTTC CATTTCAGGAATCCTCTTCGACCTCGGGATCTTAAAGAAGCCGGAAATAG TGGAAGTGCAACGAAACGACTTGATTTCGGACCACATTGGTGACACTGAA ACAGAtactgaaaaattaattaaatcaaGCTTCGGAAAAATCCTTTTTGT TGACGAAGCATACAATCTATCGTCAGAGAACAAATGCTCAAAAGATTACG GAAAGAGAGCTTTGGATTTTGATCATGAGATATCTTTTACCACCACCACC CAATTCCAAATTCCAATAGATCCCGTGATAATTTTCTGTGGCTATCAGTC AGATATGAAATCCTTGCTGAAAGTCAACAGCGGGTACTTAAGAAGAATAA AGCAAAGATTTCATTTGGATGATTATACCCCAGAAGACCTCTGGTGTATT CTGGAGGGTAAGCTTTAAGCTATTGATGTGAGGTGTCCATATGGACTTGG GCCCCTCGTTATTAAGTGCTTTAAAAGCTTGCCAAAGGaatacattttgt taaacaatgCATCACTTGCCGATGATATGTTGCATGATATCACCACTGCA CAAGAAGAGAGGCTTTTGGTGCCACAAAATCTGAACTAACAAAATTGGCT GTCGATAATTTTACTTTGGGCATTAACACTTTTCTTAGTAAACTCCAAGA GGACCTTAAGGTGGAAGTGCGACGCTTGGTGGATAAGTTGACACAGATGC CGGGGCCTGTTGATTCTGAAGTGGTCTTACATATCAAAGGAGTTGGGCTT ATACCAGGCTCCCCAACGATGTGGCAACGTTCTTTCAAACTTACGAAAAG ATGCCTGTACCAGGTTCACCGACGACGTGGCTAAGTTATTCGAAACTTTA GTTTTATTCATTTagcttttttgtttaaaaacttCTGTACATAAAAATAA TGTTGGaagtattttgttttgattgtaatTTATCGCGAGATTTCTTATTG GTACAAATTGTTGCGCGTACTAATTTTCGAGCAATTTCGCGCAAAGGCCC GAAAATGCACGAAATTTAGTCCTAGAATTCCtctagaaaaatttaaaaca accAAAAATTCACGATCAATAGAGTCttaaagttgtatttttttatttca tatttaaatAATACCAGAATATTAAAGAAAATACGCTCGTGCGTGAAAAT TAGCACCaattagccaaattctggagccgctcgctgcgctgcagttgatg cgcgtgtcgggacaaaaatcgaggcggaagccattttgtttacatttttg gctgAGGAAGCACTGCAAAACAGTGCTTTTTGAGTAGATTTGGTGATTCT tgggaagaaagaagaagaatactGCTTGGAACCAACATTAAATGTATTGG AATAGACTTCTATCATACATTGGAATAACAGACAATACTTTTTGAATATA AAATGAATGTGTGAAActtgcttttttgtttacaaacttcACTCAAGTAG TTTTGTCGATTTTGCTGCTTTCGAAAGCTGTTGATGAAGACTATTAACTT GCAGAAGTAACTTTATATTGGTACAAACAATGACTATAATAGCTTCACAA ACATTCCCTATCATGGAATTCAGCTGGGAAAGATTTTTTCGATCGCAATG AACAGTTTTGATATTGATGATATGAGAGAGATATCCAAGATATAGGCTCA TAGTTCAAACATGGTTTCACCCATCCccttagataaaaaaaaattcacaa ttcaTCTTATTCATCTGAAAAATGGCTAAAGAGACACCATCGGTCGGATC GGATTCATCACTGACTGCGCTGACGGATAAACTTTACttttaactctcaa aattttgtcaTTGAATCTTTCCATCCAGTCGTCAAAGACCGAGTTATAAT GTTATAAAAGTGACTGATTTTGTAGTACGTTTTACGTACAGGCTTTGATT GGATCCAGGACAAGAAAAGGATAAGCAAATCcgaagaaagtgccaaaaaa ttctgaaattttggaaGTACCGCAAAAATTGAAAGTACGTTACGACATTG ACATGACTGTGTTTATCATATAATGGATTATTATTGTTTTGGATATCCAG CACACCatcaacggctctaacttgggacgagtggtcATATTATGGGATGG TTGACTTtctggactgtattttcactGTTAAGTCTctgttgacaacaagt ttgttttctatgatttgcgactatgttaattaaatgactttggaggttcg gtaaaatgattgccgaattgctgtcccaagttagagccctTGACGGTACA AATCCACTTTGTAGTCATTGCATTTTCAGGCAAAGTTATGATGCCTAAAG CACtgtctgaaattattttttatttggattatcAGTGCTCAATTCTGTTC GGTGGAAAAGCTTCCAACTTCCCAAGTACTGTCACAAAGgattatgataa aaaaattacgagatgtttttactttatcattaaatatataaaatttgtac aaagTTTGCATcagccaaatatttttatgcttgaaAATAGTTTATAAATT CTATTCTGTTGGATAATTTTGTGGtggtaaagataagaaaaacataACAT GAAGTCAAAATACTCTCAAACACTTAAACATGTTTATGtatgattttact ttttacctATTTCCCAACCCAAAATCTACTTATCATACTCAACTGAGGCC CAAagtgagcagaaaaagtttttctaagaaaagtaATAGCCCAAATAAAA CATATACAGTACAAAAAGTTCATAGGCTATAGGCCAAAGACTGAGGCTgg gataattgaaaattccACAAACGATGAGTGATTATAAACGTTTCATGTTT GGAAGAGGCTTTTTCTTGAAATCCAATAAAAGTTCCAACATAAATCCAAt ctctttttccaattttttgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGC GAATGCCgcctaaaaacgaaagcgaaagtattTTTTGTCCCTACAAGCTG CGCAcggcagcgcagcgagcggctccagaatttggctaataaaGTATGAA TTAGAAAAGAGCAGAAATCTCACAAAACAtggaaacaaaaaatggcaTAC AGGAACGGTTGAAAGAATCGCTTACTATGAATACTCGTACAGAAAGGTCA GCAAAATTAACTTAAGATGATTTTTTCAACTAATATAATTGAGTTTAAGA AATTAATCACAAAGTTCGAGGACCTA

Coding sequence (CDS) from alignment at scaffold_360:32524..40049+

>TCONS_00061781 ID=TCONS_00061781|Name=TCONS_00061781|organism=Clytia hemisphaerica|type=CDS|length=1008bp|location=Sequence derived from alignment at scaffold_360:32524..40049+ (Clytia hemisphaerica)
ATGACCTACAACTACGAGCTTGAATCCTCTCCACGTCCGTTCATGTTGCT
TCAAACGTTCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAACATTG
ATTTTCGGATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTATTGGCA
TGTGACGGAACCAAAATTGGTACTAACTTCAAAAACGTGTTTGTCACTCC
GATTGAGAAGCCAAGTTATGACCATCCCACGGAGACTCTTGGTTCTATGG
ATCACTGCCCGTTGAAAAATCAGTTAGCAAGAACAGCATTTGCAGAATTA
GTTGATCAGGATACGACTGAGCACTTTGAGGCCATCCCTGGCGAGTTAAA
ACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCATCTTAAAAAGG
CTTACTCTAATGTTTACAAACAACTGTCAAGAACATCTTCCGTCGAcaca
aaaaatcataaagaatcaaagagccaatctcgagaaaagctaatacctaa
gtaaATGACCTACAACTACGAGCTTGAATCCTCTCCACGTCCGTTCATGT
TGCTTCAAACGTTCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAAC
ATTGATTTTCGGATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTATT
GGCATGTGACGGAACCAAAATTGGTACTAACTTCAAAAACGTGTTTGTCA
CTCCGATTGAGAAGCCAAGTTATGACCATCCCACGGAGACTCTTGGTTCT
ATGGATCACTGCCCGTTGAAAAATCAGTTAGCAAGAACAGCATTTGCAGA
ATTAGTTGATCAGGATACGACTGAGCACTTTGAGGCCATCCCTGGCGAGT
TAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCATCTTAAA
AAGGCTTACTCTAATGTTTACAAACAACTGTCAAGAACATCTTCCGTCGA
cacaaaaaatcataaagaatcaaagagccaatctcgagaaaagctaatac
ctaagtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038769XLOC_038769Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061781-proteinTCONS_00061781-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061781-exon-scaffold_360-1491911889:32524..34356TCONS_00061781-exon-scaffold_360-1491911889:32524..34356Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1510915933:32524..34356TCONS_00061781-exon-scaffold_360-1510915933:32524..34356Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1575043694:32524..34356TCONS_00061781-exon-scaffold_360-1575043694:32524..34356Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1491911889:34493..35749TCONS_00061781-exon-scaffold_360-1491911889:34493..35749Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1510915933:34493..35749TCONS_00061781-exon-scaffold_360-1510915933:34493..35749Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1575043694:34493..35749TCONS_00061781-exon-scaffold_360-1575043694:34493..35749Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1491911889:39970..40049TCONS_00061781-exon-scaffold_360-1491911889:39970..40049Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1510915933:39970..40049TCONS_00061781-exon-scaffold_360-1510915933:39970..40049Clytia hemisphaericaexon
TCONS_00061781-exon-scaffold_360-1575043694:39970..40049TCONS_00061781-exon-scaffold_360-1575043694:39970..40049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_360supercontigscaffold_360:32524..40049 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.679711 0.56406 1.16156 1.33566 0.644728 0.572205 0.531773 0.688771 0.486055 0.408454 0.291631 0.506807 0.367018 0.498978 0.336897 0.387985 0.346058 0.335515 0.290031 0.302094 0.511552 0.487799 0.261142 0.604882 0.674152 0.698651 0.711516 0.488972 0.464641 0.64533
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061781 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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