TCONS_00061833 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061833
Unique NameTCONS_00061833
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length344

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061833 ID=TCONS_00061833|Name=TCONS_00061833|organism=Clytia hemisphaerica|type=transcript|length=344bp
AGTCTCTCTCAAGGCTCTAATCTTTTGCTTGATTTGGTCAACTCAGTTCG
TGCTGGACCCACCTTGTCTACTTCTAATTTCACTTCTTTCCATGCCtcca
attttctcaaatttatcAGCCCAAGCTTGTACCAGGCACATAGTTTGTTG
GTCATCCCATATTCTCCGCTTCACGACTTTTTCACTAGAGGCTCCTTGTT
CTGCCTGGTTTTGATGGTCCTGCTTGTTGTTGGTCGCTGCATTCTACTGT
ATGGGGCTGCTGTAGCTGTGGTGGTTGAATCACTTGGTTTGGTGGATAAA
AGTATTGTGGCCAGccaaaaccaaaattaaaattatgatTCATA
Run BLAST on NCBI

transcript from alignment at scaffold_360:44211..44554

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061833 ID=TCONS_00061833|Name=TCONS_00061833|organism=Clytia hemisphaerica|type=transcript|length=344bp|location=Sequence derived from alignment at scaffold_360:44211..44554 (Clytia hemisphaerica)
TATGAatcataattttaattttggttttggCTGGCCACAATACTTTTATC
CACCAAACCAAGTGATTCAACCACCACAGCTACAGCAGCCCCATACAGTA
GAATGCAGCGACCAACAACAAGCAGGACCATCAAAACCAGGCAGAACAAG
GAGCCTCTAGTGAAAAAGTCGTGAAGCGGAGAATATGGGATGACCAACAA
ACTATGTGCCTGGTACAAGCTTGGGCTgataaatttgagaaaattggaGG
CATGGAAAGAAGTGAAATTAGAAGTAGACAAGGTGGGTCCAGCACGAACT
GAGTTGACCAAATCAAGCAAAAGATTAGAGCCTTGAGAGAGACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038786XLOC_038786Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061833-exon-scaffold_360-1491911889:44211..44554TCONS_00061833-exon-scaffold_360-1491911889:44211..44554Clytia hemisphaericaexon
TCONS_00061833-exon-scaffold_360-1510915933:44211..44554TCONS_00061833-exon-scaffold_360-1510915933:44211..44554Clytia hemisphaericaexon
TCONS_00061833-exon-scaffold_360-1575043694:44211..44554TCONS_00061833-exon-scaffold_360-1575043694:44211..44554Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_360supercontigscaffold_360:44211..44554 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061833 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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