TCONS_00061914 (transcript) - C. hemisphaerica

Overview
NameTCONS_00061914
Unique NameTCONS_00061914
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3657

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00061914 ID=TCONS_00061914|Name=TCONS_00061914|organism=Clytia hemisphaerica|type=transcript|length=3657bp
ttttagaataaaaacaacaaaaaaccaacaacaaaaacaaatacaCAACC
AACTCACCAAGATGGATTTATAAACACAAAATACACTTGGATTATATTTA
CACAAGAAAGACTATTTGGAATACAGGCTCACCAGTAATTTACAAACACC
ATGAGACTTGCAAGGCGATATATTTTCTTGGCTGTCATCGCTACCTCCTT
ATTTTGGTTACTAATAGACCTTGCTGCTTACCGGTGGAGGAGTTCAAGCT
CTGGTGGTTACCAATCTGGGTATGATTCACAAGACCTTAAAGAACTAGTA
ACTATAGACTATTTTCGACAATTTTATAAGACGTCTCTGAATCCGCAACC
TGGGAGTGCTGGAATGGAGGGTGCAGCTGTGATCAATCCGGCTGGTGAAA
AACAGAAAGAAGATAAATCACTTGAAGATTACGGATTTAATGAATTGTCT
TCATCAAAAATATCGCTGGAAAGAACTATACCAGATAATAGAGCTAAAGA
GTGTTTCAACGTAAAATATCCTGGAGAATTGCCAACAGCGAGTGTGATTG
TTATTTTCCACAACGAGGCTTGGTCAGCCCTCCTCCGTACAGTACACTCT
GTCATTGCAAGATCTCCTCCACAGTTTCTTCACGAAGTGATCTTGGTCGA
TGATGCCAGCATCAAGGACTTCGATAAACCTTATAGCCACTTGGGAAAGA
AATTACAAGATTATGTGGACACACTACCCAAAGTAAAACTAATCCGTTCG
CCAAAGCGCGTCGGTTTAACACAAGCAAGATTGATCGGTGCTGATAATGC
TCAGGGAGACGTTTTAGTGTTCTTGGATTCTCATTGTGAGGCTACTTATG
GTTGGTTGGAACCAATGCTGGCTCGCTTGAAGGAAAATCGAAAACTAGCC
GTTGTTCCAGACATCGAAGTCATAGCCTGGAAGAATTTTCAATACAGTAA
AGAGAGAGGATCGTATAATCGAGGCATTTTCAGTTGGGAGCTGATGTTCA
ATTGGGGCCCGTTACCGGAACGCGAAGTCAAACGGCGAAAGAATGATGCT
TATCCTATCAAATCGCCAACAATGGCGGGTGGTTTGTTTGCTATGGATAG
GAGATATTTCTTCGAAAGTGGAGCTTATGACAGAAAACTAATATACTGGG
GTGGTGAAAATGTCGAAATGTCATTCAGGCTTTGGATGTGTGGCGACGGC
ATTGAAATTATCCCGTGCTCTCGTGTCGGTCACGTTTTCCGCGAACGTGC
ACCATACAAAAGCCCCGACGGTTCAACGGACCATAACAGTATTCGTGTCG
CAGAAGTGTGGATGGACGAATTTAAAGAGATCTTTTACTCCTTCCGCGCA
AACTTGAAACCAGAGATGGGTGGAGATGTGACGGAACGCAAAAAACTTCG
AGATCAACTTCAATGTAAAAGCTTTAAATGGTACCTGCAGAATATCATTC
CGGAACTTGAACTTCCGGATAAATATCCTTATGGGCGTGGTGATattaaG
AACCTGGGTACGAATTCTTGTTTGGATACTTTAGCACAAAACAATGCTGG
TGGAAGACCAGGGTTGTATCCATGTCATAAAATGGGAACTAACCAGttct
tcattttcACGAAACGAAAGGAGATTTGGCATGATGGTTTATGTGTGGAC
TTGGATAGCCATGCAGATACTGCTAAAGTGAAAATGTGGTCATGTCACAA
GCAAGCTGGCAATCAAGAATGGATTCACCAGAGAATTGGTGAGGGTGGAT
TGATTCAACACTCAGTCCACAACCGATGTTTGGAAGGCCTTGGTGATCAA
ATAGTCGTTCGACAATGTGATAAGAACAATCGAAAACAACTTTGGGTATT
TGAATCTTACCCCGATGCGAATGTACCAGCAGGTGCCAAGAGAACTTGGA
TGTAACTCATCCTAGTTATAGTGTAGGGATTTGCTAGGTTAATATGATAG
CTCGGATTTTAAGTACAGTGTATGCACTTTGCTAAGTAATACACGAATTT
CGTATCAGTAAtccatgtaaaaaagtcacgaaaaaaaacCGGGCAGAGCT
CTGATAGGCTGAAAATTGCACacataaacatatttttctcaaaatggtcC
AAAGTTTTAGGTAATATTTGCAtgtctcagccaatcagagcttttCTCGA
cgtttttgtgacttttttacatgaacctgctaataggaaatttgTGTATT
GTCGTATATACTTGTCTAGAATTAGTGACACGCAAGAGATCCTTGATAAG
AATATTTTGTTCTCAGCGACACAACTTTTCTTAGGGTATTCCTTCATTAT
TGCTTTTTTAGTACAATAATGTTccgtttttatttaattttgcagTCCAT
TTCTAGGTTTAGGTTTTACAATAacttttcatttatttcaagTTCTTGAT
ATGTGCGAGTCAAGGTTCGTGGTACTTTAAAATGGCGTAGAATTTTAAAT
GGGAACGCTCGAAAATGGCCGGGTTAGTCACTAGGTGACTACTGCCATTA
ATCGGACATTTTTCGGCTCTATGTATAGTACCCCGTGAATGTAAAGAATT
TCTTGATGTACCTGTTTTCATATCTTTCCTTTGATGCAATGATCTTTGAC
TCACACATATCAAGAATTGTgtgttttatatttattttgtttgaaatttc
taGTAATATTTTGGGGAACTGATTTTATCGACGATCTTTTAGAAGTCCTT
TTGTTTTACTTGTGCACTCTTCTCAGCTGCCACGTCGAAAACATGTCAGT
CATTCtcttgaaaatgttttccatAGCATCGAGTTTAAAGTCCTAGAGAG
TCTAGATATAAAACCCTTTAGATGGGcgatgaagccacttatttcccatc
cgaAACGCTTGACGCACGTGGTTTTCACGCAAACACCcagtttttaaaaa
tagatatgctttgaaaaaaaagtgccacctgaaaacaaaacaacactAGA
TTCAATCTGCTATTCCTAAAGCGGCGCAAAAATCGTTAAAAGGTTTCGCT
TTTCCTTAATTAAGAAAGGTTCAAGATTCCACTCTTgcctttcgggcttt
aaactctaTATATGGTAGCATAAAAAACTGCACGCTTACAGTGAATATGG
TTTTTAGTACCTGTTGGCTCTTTTTGTTGAACCTGACAAAGCTTTGGCGT
TTTTTTCTTGGAAGGAGAGTGAAAAACGACTGCTTAATTACTTCTTACGT
AGACCGTAATAATCCGGGACCTTCGGAGCGCTTTATAAGGAAAACTTGTA
GGGTTACTTGTCTGCCCAAACATTATCATTGGCTTAAAGGATCTCTGATT
TTCATACAGTTTGATTCTTCTATTCGTTCCGGTTTTTTCCTCTCCATACT
GGGTGAAAGTCTAGTTGAAAAAGCAATATTCGAATGTGCCTAAATCATCA
TATTTTGGCCAGTTATCCAAACGGTTCAAATTAGACAAATAATTATGTGA
AAACCATTAGGTAGGAGGTTTTACAGGTGTTTATGGTCATGTTGTTATGG
AAACATGACAAACAGCTCAATATTGctaatgtttatttttatgAGGAATA
ATTTTTTAGTATACACCATTATTATAGGCACATATAAAATTGTATGCgta
aaatttttaataaaagttgaaaatttataaGAAAGATGTTCAGATTTCTA
ATGAAAC
Run BLAST on NCBI

transcript from alignment at scaffold_361:952596..965837+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00061914 ID=TCONS_00061914|Name=TCONS_00061914|organism=Clytia hemisphaerica|type=transcript|length=13242bp|location=Sequence derived from alignment at scaffold_361:952596..965837+ (Clytia hemisphaerica)
ttttagaataaaaacaacaaaaaaccaacaacaaaaacaaatacaCAACC
AACTCACCAAGATGGATTTATAAACACAAAATACACTTGGATTATATTTA
CACAAGAAAGACTATTTGGAATACAGGCTCACCAGTAATTTACAAACACC
ATGAGACTTGCAAGGCGATATATTTTCTTGGCTGTCATCGCTACCTCCTT
ATTTTGGTTACTAATAGACCTTGCTGCTTACCGGTGGAGGAGTTCAAGCT
CTGGTGGTTACCAATCTGGGTATGATTCACAAGACCTTAAAGAACTAGTA
ACTATAGACTATTTTCGACAATTTTATAAGACGTCTCTGAATCCGCAACC
TGGGAGTGCTGGAATGGAGGGTGCAGCTGTGATCAATCCGGCTGGTGAAA
AACAGAAAGAAGATAAATCACTTGAAGATTACGGATTTAATGAATTGTCT
TCATCAAAAATATCGCTGGAAAGAACTATACCAGATAATAGAGCTAAAGA
GTAAGacaattatttttttggaagcTTGACGACTACTGACGATACTGATT
CGAAAATGTTTCACATTCCCTTCGTGACCCTCTCATGTTTAAGAGAACCA
CCATATAGAAGTCTTTGAATCTTTGGTTTACGAAGTActtttttaaacta
aatttcctaagaaattaagCGTTTTAGactctgcaaagccttaaatttTC
TCAACTTGTTTTTATACTTGGGCCATTGAAACCTTATGATTTTATGTAGT
TTGTACTTATAAAAGAAACGTATAAACTACtcttttccttttcaattcAA
GGTGTTTCAACGTAAAATATCCTGGAGAATTGCCAACAGCGAGTGTGATT
GTTATTTTCCACAACGAGGCTTGGTCAGCCCTCCTCCGTACAGTACACTC
TGTCATTGCAAGATCTCCTCCACAGTTTCTTCACGAAGTGATCTTGGTCG
ATGATGCCAGCATCAAGGACTTCGATAAACCTTATAGTAAGTTTTTAATG
ATGGAGGGCTTTACAATCAAAAGCAAAGAGAAGATTTTACATGTTTACGA
CTGTTAGTTTTTGCCTTTACACAATTGATTCAAcccttcaaaaaatttat
tctaaataTTTTCCACGGCTTAAAAACCACTTTTCGCTAATTCGAAGGGA
ATTTTGAAGCTCCTGAATATTGAATTAGTTTTCATGtttgaagctttttt
aagcTTGGTACTCGCTTGAATTAAGAATCGCGCCTAAACGCACTCAAGCG
CAATTTGGTACACAAATGACTACTAGACCTAATTATTATCCTTTTAAGAG
TCAAATCTATTGATCTAAAGTATGTTTTAAACCACTTTTATCAAGGATCT
TTATTGATTGGCTCTATTAGCCCAACTTAAGCggtggttacacgtagccg
GGTAAAATTCACCCCAGTGTGAAATGGATAAATAATTCAACCCGGGGTGA
AAATCATTTGGGGATACACATCGGCGAGAGGCGGGgtgaaaacacttttt
tcccAACCCGGGGTGAAAATTTTCACTTATTTTCAGTCCAGGATGAAAAA
TCGAAACGAAATAGACGCACAATTGTTTTCAACCCGGGGTTCAAAAAATT
GTAtatacatgtaaaaatattcaaaaatttgcaaaaagatGTTCACGAAT
CCGTTATTGggtgctacaatcatggtcgaaacattttgagattttagtgt
attttaccgtttttcatattttaaagttcggttcgatttcgattttggag
gggttcggtggcttctaggctatattacaagccttattggaacaattttg
agcttttaaatcctaagatcctaaggtcctaagtctaattttaaaactca
gagttaaaactctactttccaactgtagtttaacgcttgaaaataatttg
tggagtttaaaatttcgccgggaaatcccctttgtctcaaatgttttgtc
catgattgtagcagCCAAGCTTGAGTCTTGTCTTTACCCCTACTTTTCTG
TGAAGCAAAATCTTGCCGTAGTGCCACCCTATAGTATGAGAGCAATCTGC
TCCTAACTTCCCAATTCGTCACAAAAATATTCGTTGTGGTTGATAATAGC
AGTCAAAAACCTATCAAAGATTTTAAATGTCCATTAACAGTTATGTCATG
AATTTTCGAGGTGGGCCTTCCTACTGTCTATAATCCTAATTACATAAACA
ACAAAATATGGAGGAATAtccaatattttgaattttattctgaTATTATT
TGTTTACATTAAGTATATAGCAACCATTAATTGTGAAAATACAACAACAG
GTTGTGTTTTGTATACGCCTCTCTCAAGGACTGATTGTGTAACGGGCATT
CCGGAAAATTCTTGCTGAATCAAAAACACTTTCAGACATCCGATTTTTAA
GGAGGTATTTGTATACTATTGCTCCGGAGGTAAGATTCCATACNAACACT
CCGATTTTTAAGGAGGTATTTGTATACTATTGTTCCGGAGGTAAGATTCC
ATACTTCCTGGACTAAGACTCACTGTCTTTTTTGGGATATTTCGGCTGTT
ATTTCCGGGCTACCGGCTCAAAAATATTAAAACGTTGATTCTAAGGTTGT
GTTGAACTAAAAGGCTGTTTAATCTTCTGAATTTAATTTTCTGCTGAGGA
GTTGAAGATGAGACTTAGTCGAGGAAGTCGAATTTTCCCTCTTAGCGACG
ATACCTGTCTTCATAGATTcactagcgagtttatgtatttacaCTTTGAA
GATGGCGGAGTGACTGAACTCATTTaaaataacccgcagttctgacccgc
aaaattcgaggacggtaaaagtactgatttaccgtcgtcctcagtcagtc
aggatgtagacaaattagaagCTTACTGTCTCCTTTGCAGAAAAACCCAA
ATACGTAAACCCGCTACTACCACTTTTTCAGGCCACTTGGGAAAGAAATT
ACAAGATTATGTGGACACACTACCCAAAGTAAAACTAATCCGTTCGCCAA
AGCGCGTCGGTTTAACACAAGCAAGATTGATCGGTGCTGATAATGCTCAG
GGAGACGTTTTAGTGTTCTTGGATTCTCATTGTGAGGCTACTTATGGTTG
GTTGGAACCAATGCTGGCTCGCTTGAAGGAAAATCGAAAACTAGCCGTTG
TTCCAGACATCGAAGTCATAGCCTGGAAGAATTTTCAATACAGTAAAGAG
AGAGGATCGTATAATCGAGGCATTTTCAGTTGGGAGCTGATGTTCAATTG
GGGCCCGTTACCGGAACGCGAAGTCAAACGGCGAAAGAATGATGCTTATC
CTATCAAGTAAGTTAActgttattttttctttcacttaaaGTTTGGATGC
TTAACCAATGTAAAAAATAGCGCTGCAATCAAGGTAAAAGGTCCAATCTT
AAAATTAGCGTCTGAAAAAACTGAGAATCTTCAATGAGGGAGGAAAGGGG
AAATCTCAAAGTTTTAAGTTACTAACGTAAAAAAAGTCTTAGTTCTCTCA
CACATTTTGAAATCGGAATTTTTGCCTCGGTGACAGCAAGGAAGGTCGAG
CATTCTTGTATGATATTGACAGTTATCTTTCTATACGCTGTCATGGACAT
GCCGGTATACTTAACCACCCTAACAGTTCTGTTAGTTTGATTCCGTAGGA
TGGCTAAAATTCCTCATTCCCCGGGTAAAACTTCCTATTGCCACTTTACA
ACGGTAGCAACTGTCAGAAGACTCTGGCTAGGGTACACTTTAAGAATAGA
CGAAAAAGTAATTTAAATTTGTAAGGCGGTCAGTTTCAAGGCCGTTGTGT
GCTGTCTACAGATTTGCacgtagaaaaaaaattaccagtATGCCcgtaaa
aaaagtcaaataatCCCGGAATAAGCAAGGAATGTTTACCGGGAATCAGa
aagtttagcaatcctacggtaaGATTCAATTAACCATTACACATTAGGTC
TTCATTTGAATATTACACTTATTTTCGGGCACTTTTAAAGACAAAAATCT
GATCAGTTCAGATAAGATAGAATTTTTATGAGAAACTTTaataattggtt
atttgaagtaacacaattgacgcgttctttagaaaataaagtaacaaaat
ctttttatcaCTGTTTAACgatcaaccaaatcaaacgagagcttgtTAAA
ACTATATCTCGTCCCGATCAGTTTGATGAAAACAGAATTCCTCCACGATA
AATTCTTTCTTTGATATTTCAGATCGCCAACAATGGCGGGTGGTTTGTTT
GCTATGGATAGGAGATATTTCTTCGAAAGTGGAGCTTATGACAGAAAACT
AATATACTGGGGTGGTGAAAATGTCGAAATGTCATTCAGGGTAAGCCATT
ATGAAGTACCCAAGCAGCCAACTTCTTATTCTTTTCTCAGTATAACTGAA
TTTCATTAATCTTCTCATTTGTGCCCTACGCAAAATTTACAAGAATATCT
TCGTCTAACGACTAACGACAAGATGCCAGATCCTCATATATTGTCACTAA
AGAGCTGTTTGATTTTGGATCAAGATTTACCTTGCTCCATTACAATTCTC
AATTCAACCTTTCAAAGCGCTCTTGTTTTGCTTTCAATCTTGATGGATTA
TAAAActcatttgaattcaaaattccttttcaaactcgGTGTTGTCAGTA
AAGATGATTCCAGGTCGTCTTTATATAATGTCATTAAAAACTGCTTTAAT
TTAATTCTAAACTATTATCAATCCCATATGAAAATTTTACTCTTTCAATT
CCAAGATTTCGATAGTCTCATTTCTGTTGGAAGGTAATTATCATTGGAAG
TTGAATCCTTTCCACTAGCTATCCGTAAGTGGTTCTCCTAACAAAAACAT
GGTTTTGGAAGCATCTCTGACAATTCTCGTCTTCGGGAGGTCAGAATTTA
AGAAGATACTTTCTTACTGCTACAACCAATCAGAAGACTCCTCTTCGTTT
TTTCTACACTCCCttccatttttcatttctttgctTTGAAGTTCAAGGAA
AAACAGAAATTGGTCTTTGCGACAGGTGGCACAAAATATTCCATAACGAT
CAGCTCGCTTGTGGATATTACATTTTCGATGTTTTGTAGATGGTAGTAAA
TTCATTTGAGTTGCTTTCTCCATAATCTCATTAAATCTCATCTTGTTGTT
ATCCTCTTTTGGAGCTTCTCCAACTCCTAAAATATCTTCCTTGTGAAGGT
TCACATTTTctttgaagattcttttgtgtggTGATTTTGATGCAGATTGA
TCGCTTTGTAGATCTGGTAATCTGTTCTCATCAACATATGCCATCAtgtc
aatcaaatcaaaatcttcAGTCCGAATATCTGGATGTTTATTATATCTCG
AATCACGTGATCTTTCACAACATGTAATTCCTTCAGTTCAATTTATTTTG
TCTATTCATTGGTATTCATTGGACGTCACGAAGTTTCGAAATTATCCCTA
AAAACTGGCTAATAAAAACGTCCCAAAAGAAAGGATGTGGTCATCTATCC
TTCCTACCTCTCTCcttttgttcattttgaaacatttttacttcatttta
gTTCAGTTTGCTCGAAACATTATGTTTGTGTTTTATAACGAGCTGTTGTA
CATCCCCTTCTAtcttttgaaatatcaaattccTAAGTTGCTAAGTAAAA
TCGTGAAACTTAAAAACGTTATTTTATTGCGTTACAATGCTAGATTTATT
TTATCTATCAACTATGTAAATGTTCTATATACAAAAACCTGGGTCTTTAT
ATGAGAACTGCAtacaaatttttaacttttcctGGAATTTCCTTGTTTCA
TttacctaaaatatttttctgtcggTGACGAGTTTTTAATCAACATCTGA
ATTTTCTGTTATATAATGCGAGAAGAATTCTAAGACCTCGTTAACTGCTC
GTCTGGTTGAAACATAAACTTTAACAGAAAGTATTGAATCTTTTCAATCC
TCGTTAAAGTGAAATCTTATCATCTAGACAATCCGAGTGTCTCTTGCTCA
AGTACAGTTCATCACTTTCTATAAATCAAATTGTGCGTTGGCTAGATATG
CTTATATTTGCAAGTAACTGAGAAACAAGTCCTTTAATTCACAACTCCTT
TAATTCACAACTCCAATGAAATAATGTTAACTTCAACTGACCTTTCTCTA
TCTCGAACCCTTTTTTGGTCCCTCGAACACTTTTTTGGTCCCTCGAACCC
TTTTTTGGTCTCTCGGCCTTTTTTTGGTTCCTCGGAAGTTCCAGCAACGG
TTTGAAACTAAAGTAAAACTtccaattaacggacactctaaaaggcggac
acctttGATTAGCGGACGATTCTATTTTCCcaggccgtttcctagtcaaa
tcctcgtAAAAAAGCTCCCAAAAGGCGGCCACTCGATTAGTGGaccctcc
aattagcggacaaagttttttgcacgaaatggccaaaactctATTTTTTC
CTCTCTAATTAGCGGAATCGACGGTCACACTGGTcacataatttaaaaaa
ttagacaggattgatttatccaaactatttatttcttaaatacttcaaaG
TTTCATTGAACAAATTGCTTATAGACGTTTGGAGTGCTCCCTTTATCCAG
TCGGTGAATTCGCTTACGTCAAAACCTGGGAGGTTCCACTGTTATATGAA
TTTTAAAAacgaaatatggaaatattcgTACGAATATTCAGCTTGAAACG
AGCAATTAGAGTTAGCAAAAGTCAATCTTATCTCTGTTGTTTTTTTAGCT
TTGGATGTGTGGCGACGGCATTGAAATTATCCCGTGCTCTCGTGTCGGTC
ACGTTTTCCGCGAACGTGCACCATACAAAAGCCCCGACGGTTCAACGGAC
CATAACAGTATTCGTGTCGCAGAAGTGTGGATGGACGAATTTAAAGAGAT
CTTTTACTCCTTCCGCGCAAACTTGAAACCAGAGATGGGTGGAGATGTGA
CGGAACGCAAAAAACTTCGAGATCAACTTCAATGTAAAAGCTTTAAATGG
TACCTGCAGAATATCATTCCGGAACTTGAACTTCCGGATAAATATCCTTA
TGGGCGTGGTGATGTAAGTATTTTTTAGCAGTGTATGAGGCTtttatcgg
ctttccgaattctccccgaatgattacccatgatgcattgcattgaaagt
caatatcgtccgtgaattattttgcgcaatgcatcatgggtaatcattcg
gggagaattcggaaagccgatatcgtctattagttTCTCCACGATCTTGC
ACTTAAATAGTAGGGCGTATGGGCGTGATAACGAATGGCGGTTGGGCTTT
TTGAGAGATCTGAGTCTGAGCACGCATGCTCAGAAGAGACATGAACGGGT
TTAATGATGAtagatattttccaaaattacaaagaaaatacCGTGTCTTT
TCGTTTAAGGGTTTTTAGTTGGGGAATTACTATGGTCATTGAGTTAGAGG
AGAAGAGCATTTTACTGGTCCAAGTAGTATGACTgtgaaaattaatttat
ttcctGAGGATCCACTAAAAGAGAAGTTCTAGATGCCTTTAATAGAGATG
GAGATTTTCCCATGTTTTTTTAAGTTGCGTCATTTCCGCCATTGTGAAAA
CAACCGATCGAATTTGTAGAGCCGATGCCGTACGCAAATAGAATCTTTAA
TTCCACAATGGTGAAAATCACGTGATTTAGCCAAAAATGAAACATCTATT
ACTACTAAACTTATgagaaattttctttgtcttgaCTTTCTAATGTACTA
TTTGGTTTATTTTCCgataactttttctttttcagattaaGAACCTGGGT
ACGAATTCTTGTTTGGATACTTTAGCACAAAACAATGCTGGTGGAAGACC
AGGGTTGTATCCATGTCATAAAATGGGAACTAACCAGGTACAATTCAGTC
AAAATACACTTATTGAAAGTATTCTTTGATTTATCTTAGGCTCTATGCAC
ACCTGAAATAGTTATTACcgagtttttaattttaatgtGCCTTTCTGCGA
CGGACATGTTCTGcttctaatttgtctacatcctgactgactgaggacaa
cTGTCCTCGAATTTGCGGCTCAAAACTGTGaattattccaaatcgcttca
gtcactctacagcacctgaccccgagaatgtaggtgaaatttgaatcaga
cctgaaagatgtagatttgcattaaaaaaaatattgaatgttttcaacga
aattttgaacccccaaaatcCTTTCCCAgaggttagtttcattacttttg
atagataggctaatttttttggtctttgAAGTTGACTCTCATTTacgtta
taacccccagaatgtaggtttgttttgatggctttaaatctagtatttgt
aaaatgttgatattttttcaattggattaaTTATAACCAtagattttaga
aatattttatgccaaaacaatcttctaaagagcattttgttgttccgaaa
attggatttttttgctttttaacccccagaatgtaggtgaaaagattcgg
ttgtcGAGAGCAAGAATTacagtattcatcggaaattattgttctctaag
tgaaattcatactttagaaatttactctgacaaaaaattaacaaagatat
taattcTATCATGCTataaatgatgaaaagtaaaagaaaggacgaaaaga
agagacaaagaagttgtttttaatttataggttgaaatttttgtgttaaa
aatatgtgaataatgtaacaacacccctgcctcacagccccggtggaatt
aTTTTCCCACATCAGGTCCAAAGATGTCTACTAaagtcccaatggggata
gaaattctatagttccaaacttaggcaaattttttaattgggctggggtc
ccagcgggtctgggacacATCGTAACagctcaaaatgtcaacattaatca
tctcttaggtaatactttcatgttatgaaagtacaacaaacaatttgtat
ataatttgacagacttttcaTGTCGGTTTAtgggtcaactaaccccaaaa
agtaggtcaaacattttcttcaaaatatctaATTTAGAACAATAAGTAGG
AAATGGACTATTTTAcccatttccttagttcattaggaataagaaaatac
cctatcatcataacttaattccaatagatttcgatttagagaggatttat
ttttaaaatgtctcaattcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNcaactttttatgaagttgaactatcgttagggctacaatgctaaaa
aatgagaaacctacattctcggggtttactacattctcggggtcaggtgc
tgtaccatcctcaaaagtgcaaatacataaactcgctgtAAATTCGTTAT
AACAACACCTTACATGGAAATATCGTTAGCCTGGTTTTCCTGTCATCTGT
ATACTCGATGAATATTTTCTTAGATTTTGTGAAGACCTAATGGAAGATTG
TTTAGCTAGAACTCAGATTCCTCAACattttttcgcggttttttttgtaa
acagtGACTTTGTCATATAGTTCGACTACCGTGTGCAAAAGTGTTGAAAA
GCTTtagaataaaagaatatatatttttctcttttcagttcttcattttc
ACGAAACGAAAGGAGATTTGGCATGATGGTTTATGTGTGGACTTGGATAG
CCATGCAGATACTGCTAAAGTGAAAATGTGGTCATGTCACAAGCAAGCTG
GCAATCAAGAATGGATTCACCAGAGAGTAAGTGGTTTCTTTGAAGCattt
aactttgttttgatgctggttgttggccgtagcatgaaggtagaacATCC
AGCTACAATTCGTTAGGTTTTTCGTTTAGCCCCggctgggtcataccaaa
gacttcgtacttacaaaatggtacttgatgcctcgcAGCTAGATTCTCTG
CAACTAAATGAAAGGAGCAAGGGTAAGTAGAGAACTCCAGGAAAATGATT
AGCGCACTCCCCCCTACCTTCGGatagacagctagagaaaagggaaCCTT
TGAGTCGCTCTCTACTTCGGTCGCTAACTTACTTACTACTAATATCAATT
CTAAGTCTCAAATGAAATGGAAATATTCGCTACCAGCCACTAAATACTGA
CGTAATTAGGCATATCGCTTATtgactaaaattttaaaattttacgaCTA
AACCTAAAATACCTATTTTAAAAATGGATGTGAGCTTGCAAACTCAGTTC
CACCTAAACGCACAACCCACAAAACATGCACATGCACACAAATACATAGA
CCTCACTTCAAAAAATAGTTGGTAaattaaaatacccaaaattaattTGG
TTTCAACTTTGGTTAAACTTACGTGAGAAACCGGTGTCCTAAACTATCTC
ACTAACCAGACGGAGACTGCAGAACTTAAATTTCGGGATTGAAGTAATAC
ATGTGAAATGTATCGATCCTCAAGAGAAAGAGGTGGACAATTAATAAATA
ATTAAGTAGTCAGAAACCAGTCAGAACATACAATTGGTTCTCTTTGAttt
gagaaagattcgaattacagataTATGATGGATAGAATGGAGAATCTGTT
TCACAAGTAAGATACATTAGTACACAGAGAACAAAAGAACACACATACAG
GACAGAGAAAACACAATCTGACTAACTATGCATGAAGATTCTGAGATATA
AAGTTTCAAGACTAAATCagagagaagaaaaatgaacaGATTGTCCACAC
AGTAAGTCTCTTCTTTAAATTTCTACATTAACAAATTTACTTATACTATA
CAATACCAACATTTAACTTTAACATCAACATAATTTTTAACTGAAACACG
TTTAATGggctattctaaaaaaaaaattgtacgccctatgttgaggaggt
ttAAAAAGGTGACCTCctagattttttccaattttttagttcccccttgg
atttttttctcctattttttggaccaccctggattttcgacctcgtttta
ctgacctccctggattttttcattcaaaaaaccagACCAGACagcctgga
cgtcacacctcctcaacatagtgggtacagactatttctggaatagccca
atacgATAATAATTCTAACAACTGTTAAATTTCATCAGACATACTGAACT
CTTCCTTTTCCATCTCCAGATTGGTGAGGGTGGATTGATTCAACACTCAG
TCCACAACCGATGTTTGGAAGGCCTTGGTGATCAAATAGTCGTTCGACAA
TGTGATAAGAACAATCGAAAACAACTTTGGGTATTTGAATCTTACCCCGA
TGCGAATGTACCAGCAGGTGCCAAGAGAACTTGGATGTAACTCATCCTAG
TTATAGTGTAGGGATTTGCTAGGTTAATATGATAGCTCGGATTTTAAGTA
CAGTGTATGCACTTTGCTAAGTAATACACGAATTTCGTATCAGTAAtcca
tgtaaaaaagtcacgaaaaaaaacCGGGCAGAGCTCTGATAGGCTGAAAA
TTGCACacataaacatatttttctcaaaatggtcCAAAGTTTTAGGTAAT
ATTTGCAtgtctcagccaatcagagcttttCTCGAcgtttttgtgacttt
tttacatgaacctgctaataggaaatttgTGTATTGTCGTATATACTTGT
CTAGAATTAGTGACACGCAAGAGATCCTTGATAAGAATATTTTGTTCTCA
GCGACACAACTTTTCTTAGGGTATTCCTTCATTATTGCTTTTTTAGTACA
ATAATGTTccgtttttatttaattttgcagTCCATTTCTAGGTTTAGGTT
TTACAATAacttttcatttatttcaagTTCTTGATATGTGCGAGTCAAGG
TTCGTGGTACTTTAAAATGGCGTAGAATTTTAAATGGGAACGCTCGAAAA
TGGCCGGGTTAGTCACTAGGTGACTACTGCCATTAATCGGACATTTTTCG
GCTCTATGTATAGTACCCCGTGAATGTAAAGAATTTCTTGATGTACCTGT
TTTCATATCTTTCCTTTGATGCAATGATCTTTGACTCACACATATCAAGA
ATTGTgtgttttatatttattttgtttgaaatttctaGTAATATTTTGGG
GAACTGATTTTATCGACGATCTTTTAGAAGTCCTTTTGTTTTACTTGTGC
ACTCTTCTCAGCTGCCACGTCGAAAACATGTCAGTCATTCtcttgaaaat
gttttccatAGCATCGAGTTTAAAGTCCTAGAGAGTCTAGATATAAAACC
CTTTAGATGGGcgatgaagccacttatttcccatccgaAACGCTTGACGC
ACGTGGTTTTCACGCAAACACCcagtttttaaaaatagatatgctttgaa
aaaaaagtgccacctgaaaacaaaacaacactAGATTCAATCTGCTATTC
CTAAAGCGGCGCAAAAATCGTTAAAAGGTTTCGCTTTTCCTTAATTAAGA
AAGGTTCAAGATTCCACTCTTgcctttcgggctttaaactctaTATATGG
TAGCATAAAAAACTGCACGCTTACAGTGAATATGGTTTTTAGTACCTGTT
GGCTCTTTTTGTTGAACCTGACAAAGCTTTGGCGTTTTTTTCTTGGAAGG
AGAGTGAAAAACGACTGCTTAATTACTTCTTACGTAGACCGTAATAATCC
GGGACCTTCGGAGCGCTTTATAAGGAAAACTTGTAGGGTTACTTGTCTGC
CCAAACATTATCATTGGCTTAAAGGATCTCTGATTTTCATACAGTTTGAT
TCTTCTATTCGTTCCGGTTTTTTCCTCTCCATACTGGGTGAAAGTCTAGT
TGAAAAAGCAATATTCGAATGTGCCTAAATCATCATATTTTGGCCAGTTA
TCCAAACGGTTCAAATTAGACAAATAATTATGTGAAAACCATTAGGTAGG
AGGTTTTACAGGTGTTTATGGTCATGTTGTTATGGAAACATGACAAACAG
CTCAATATTGctaatgtttatttttatgAGGAATAATTTTTTAGTATACA
CCATTATTATAGGCACATATAAAATTGTATGCgtaaaatttttaataaaa
gttgaaaatttataaGAAAGATGTTCAGATTTCTAATGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038823XLOC_038823Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00061914-exon-scaffold_361-1491911889:952596..953095TCONS_00061914-exon-scaffold_361-1491911889:952596..953095Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:952596..953095TCONS_00061914-exon-scaffold_361-1510915933:952596..953095Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:952596..953095TCONS_00061914-exon-scaffold_361-1575043694:952596..953095Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1491911889:953397..953581TCONS_00061914-exon-scaffold_361-1491911889:953397..953581Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:953397..953581TCONS_00061914-exon-scaffold_361-1510915933:953397..953581Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:953397..953581TCONS_00061914-exon-scaffold_361-1575043694:953397..953581Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1491911889:955527..955902TCONS_00061914-exon-scaffold_361-1491911889:955527..955902Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:955527..955902TCONS_00061914-exon-scaffold_361-1510915933:955527..955902Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:955527..955902TCONS_00061914-exon-scaffold_361-1575043694:955527..955902Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1491911889:956818..956935TCONS_00061914-exon-scaffold_361-1491911889:956818..956935Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:956818..956935TCONS_00061914-exon-scaffold_361-1510915933:956818..956935Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:956818..956935TCONS_00061914-exon-scaffold_361-1575043694:956818..956935Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1491911889:959344..959658TCONS_00061914-exon-scaffold_361-1491911889:959344..959658Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:959344..959658TCONS_00061914-exon-scaffold_361-1510915933:959344..959658Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:959344..959658TCONS_00061914-exon-scaffold_361-1575043694:959344..959658Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1491911889:960381..960482TCONS_00061914-exon-scaffold_361-1491911889:960381..960482Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:960381..960482TCONS_00061914-exon-scaffold_361-1510915933:960381..960482Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:960381..960482TCONS_00061914-exon-scaffold_361-1575043694:960381..960482Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1491911889:962384..962521TCONS_00061914-exon-scaffold_361-1491911889:962384..962521Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:962384..962521TCONS_00061914-exon-scaffold_361-1510915933:962384..962521Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:962384..962521TCONS_00061914-exon-scaffold_361-1575043694:962384..962521Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1491911889:963915..965837TCONS_00061914-exon-scaffold_361-1491911889:963915..965837Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1510915933:963915..965837TCONS_00061914-exon-scaffold_361-1510915933:963915..965837Clytia hemisphaericaexon
TCONS_00061914-exon-scaffold_361-1575043694:963915..965837TCONS_00061914-exon-scaffold_361-1575043694:963915..965837Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:952596..965837 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.67955	3.21219	3.12331	2.40039	9.28626	10.2439	0.826642	3.44053	0.206774	1.36774	1.85718	0.0022308	1.29399	2.59809	2.33152	1.6004	1.80194	1.09477e-07	1.32485	3.00527	1.26509e-05	1.26483	1.10156	4.38683	1.87159	1.93535	3.08832	2.17838
Blast
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BLAST of TCONS_00061914 vs. Swiss-Prot (Human)
Match: GLT13 (Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens GN=GALNT13 PE=2 SV=2)

HSP 1 Score: 437.573 bits (1124), Expect = 5.837e-139
Identity = 245/576 (42.53%), Postives = 342/576 (59.38%), Query Frame = 1 
Query:  163 RRYIFL-AVIATSLFWLLID--LAAYRWRXXXXXXXXXXXXXXXLKELVTIDYFRQFYKTSLNPQPGSAGMEGAAVINPAGEKQKEDKSLEDYGFNELSSSKISLERTIPDNRAKECFNVKYPGELPTASVIVIFHNEAWSALLRTVHSVIARSPPQFLHEVILVDDASIKDFDKPYSHLGKKLQDYVDTLP-KVKLIRSPKRVGLTQARLIGADNAQGDVLVFLDSHCEATYGWLEPMLARLKENRKLAVVPDIEVIAWKNFQYSKERGSYNRGIFSWELMFNWGPLPEREVKRRKND-AYPIKSPTMAGGLFAMDRRYFFESGAYDRKLIYWGGENVEMSFRLWMCGDGIEIIPCSRVGHVFRERAPYKSPDGS---TDHNSIRVAEVWMDEFKEIFYSFRANLKPEMGGDVTERKKLRDQLQCKSFKWYLQNIIPELELPDKYPYGRGDIKNLGTNSCLDTLAQNNAGGRPGLYPCHKMGTNQFFIFTKRKEIWHDGLCVDLDSHADTAKVKMWSCHKQAGNQEWIHQRIGEGGLIQHSVHNRCLEGLGDQ---IVVRQCDKNNRKQLWVFES 1857
            RR+++   V+ATSL W+L+D  L  Y    +     +       L+ +++ +            Q G   M G AV+ P  +++K  +  +   FN ++S  I+L R++PD R + C    YP ELP  SV+++FHNEAWS LLRTV+SVI RSP   L EVILVDDAS +DF      L   L++YV  L   VK+IR  +R GL +ARL GA  ++G V+ FLD+HCE T GWLEP+LAR+KE+RK  V P I+VI+   F+Y         G F+W+L F W P+P+RE+ RRK D   P+++PTMAGGLF++DR YF E G YD  +  WGGEN+EMSFR+W CG  +EI+ CS VGHVFR+  PY  P G+    + N+ R+AEVWMDEFK+ FY     +     GDV+ RK LR+ L+CK F WYL+NI P+ ++P +Y Y  G+I+N+ TN CLD + +     + G++ CH MG NQ F +T  KEI  D LC+D+        V M  CH   GNQ W +    E   ++H   N+CL+   ++   +   Q    +R Q W+  +
Sbjct:    2 RRFVYCKVVLATSLMWVLVDVFLLLYFSECNKCDDKKERSLLPALRAVISRN------------QEGPGEM-GKAVLIPKDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDF------LKLTLENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMAG-SDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLRENLKCKPFSWYLENIYPDSQIPRRY-YSLGEIRNVETNQCLDNMGRKE-NEKVGIFNCHGMGGNQVFSYTADKEIRTDDLCLDVSRL--NGPVIMLKCHHMRGNQLWEYD--AERLTLRHVNSNQCLDEPSEEDKMVPTMQDCSGSRSQQWLLRN 551
The following BLAST results are available for this feature:
BLAST of TCONS_00061914 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLT135.837e-13942.53Polypeptide N-acetylgalactosaminyltransferase 13 O... [more]
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