TCONS_00062175 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062175
Unique NameTCONS_00062175
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1653

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062175 ID=TCONS_00062175|Name=TCONS_00062175|organism=Clytia hemisphaerica|type=transcript|length=1653bp
CATCAGGTTTTTTAGTATATATTctacgaaaaatcatttttgaccCAATT
ATTTCATGGATACAGCCGCATCAAGAGGACAACGAATTCCAACAGCTTCT
TTCACATTCTACAAATTTTGCTTCGTCATTTTATAATCAcattttcgaaa
atgaagagAATTTTATTTACTTTCTTGCTTCAATTCTTACAGGTTATCAT
TACGCACCAATCATGTCAGCCAAGAGATGATCAATATGGACATTACACTT
GTATCAAGGGCCACAAAGAATGCTTGCCAAATTGGTACGACCCGAGCAGG
AATTGCTTAGAAACATGCAGTATTCCAACAGACGATCGAAAAGATTGTGG
TTTCCATGGAATCGATAAGCAACATTGCATAGCAAAAAAAGGTTGTTGTT
GGAAAGAAAATCACGAGAATAGAAAAATACCATGGTGTTTTCACGGCAAA
TATGTGGCACCTCCACCAACGCAACCTCCTTCGACAACTCCATCGTCCTC
ATCTTCAAGTGAACCACCATCGATATCATCAACAAAATCATCAACAACTT
TATCACCGTCTTCAACAACGTCCACAATACCTCCAACAACCAGTTCGCTA
GCAGTTaaaccatcattttcaaaatcttttcttCTTGCAACTTCAAGCTC
AGCAAATGATATCCGGCCATCCTCAAGTCATGTTGCAGCATTGTCTTCAA
GCCAGTCAACTAGATTTCAACAATCTTCTTCAACAAAATTGGAACCATCT
TCATCAACAATAAATGTTGTCAAACCTTCATCAACAAAATCTATTCAACA
AAGTTCACCagcacaaaaacaaacatcatcTGTACTCATATCATCCAACT
CTCAAAAAATTCTTAAACCATCTTCAACAAAATCGAGAACAAAATATTCA
CCATCTTCAACAAAAGAAGTTAAATCCACGCCAATCAAACATATACAACC
TTCAACCAACGTTCTAGTTTCTTCATCCTCAACAATAAAATGTCATACTC
AACAAATAATATCAACAATTACAGTAACAAAACTTATAAaacaatcttgc
tccaatcAAAAAGTTCAATCAACCCAAAGAAATAGCAAAATTTCCAACAT
TTATCAAACTAGTACTCACATTCAACCAAGAAAATCCTCTTCAAAAAACA
TTCAACCATCATCTTCagtcaaacaacaacaacaacaaaactcCTGTATA
AACACTGGACAACTTGGCAATTCTGATGAACGAATAGCTGGCGTTGAAAA
GACACCAATGTTGATCATCATTATTCTCGGTGTATTGCTCCTCTTCTTCA
TGATTGTCTCCATCTTCCTCTTCTGTAAAGAACAAAGGTTAAAGAAGCGA
TACGAGAAATTTGAAAGTGGTCAATTTGCATTAAACTTCAAGAATCCGGT
TTTTGCTGATAAAGCCATGAACATTTATGAATAACAGATGttgaaattcg
ttttttttttttttgcaagaaaCAATTTCTGCAATCTGACGAAGTATTCA
AATTGTTGATTAGCTGATGTTTATGCGTTAAATAAATGACATGTTTTCCT
GCACTTGAATCACAAATTTGACGTAAATTGCACtatttttgtacatattt
ttatAGACTTGTAGATGtttcaaatttcttaaaatcatGATTCTCtttcc
aaa
Run BLAST on NCBI

protein sequence of TCONS_00062175-protein

>TCONS_00062175-protein ID=TCONS_00062175-protein|Name=TCONS_00062175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=427bp
MKRILFTFLLQFLQVIITHQSCQPRDDQYGHYTCIKGHKECLPNWYDPSR
NCLETCSIPTDDRKDCGFHGIDKQHCIAKKGCCWKENHENRKIPWCFHGK
YVAPPPTQPPSTTPSSSSSSEPPSISSTKSSTTLSPSSTTSTIPPTTSSL
AVKPSFSKSFLLATSSSANDIRPSSSHVAALSSSQSTRFQQSSSTKLEPS
SSTINVVKPSSTKSIQQSSPAQKQTSSVLISSNSQKILKPSSTKSRTKYS
PSSTKEVKSTPIKHIQPSTNVLVSSSSTIKCHTQQIISTITVTKLIKQSC
SNQKVQSTQRNSKISNIYQTSTHIQPRKSSSKNIQPSSSVKQQQQQNSCI
NTGQLGNSDERIAGVEKTPMLIIIILGVLLLFFMIVSIFLFCKEQRLKKR
YEKFESGQFALNFKNPVFADKAMNIYE
Run BLAST on NCBI

transcript from alignment at scaffold_362:311657..322991+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062175 ID=TCONS_00062175|Name=TCONS_00062175|organism=Clytia hemisphaerica|type=transcript|length=11335bp|location=Sequence derived from alignment at scaffold_362:311657..322991+ (Clytia hemisphaerica)
CATCAGGTTTTTTAGTATATATTctacgaaaaatcatttttgaccCAATT
ATTTCATGGATACAGCCGCATCAAGAGGACAACGAATTCCAACAGCTTCT
TTCACATTCTACAAATTTTGCTTCGTCATTTTATAATCAcattttcgaaa
atgaagagAATTTTATTTACTTTCTTGCTTCAATTCTTACAGGTAAGACT
TCTTTGTTCTTGTCTTCCTTACTGATCTGGCCGGGTAGCGGAGGTATTCT
TTTTAAGAAATCAGAATTTTCACTTCATTGAATTTCATCGAAAGTATGAC
TTACAGACGCTCCTGTGACCATGATATTTGCTTCAAATGCCTTCAAATGC
TTTTAAAAAGTGAAAGAGAATTTCGCATTTAGATTCCATAGATTCCAAAA
ATGCAATAATTTTTGAGGTTGTAAAGGGGGATGGTTATAGGAGTGGATTG
CGTAGTTGATTTAAATAAattgtttgttgtttattttagaTTGaacagta
atttttttaaagttacaaATATTTGACGTGAATTTAACCTCTTAGAGGTT
AGGGGCCATTCAAAACTCATCCAAAATTCTTGCTATGTCATTGTTGTTGG
TTGTTTAAGCAGAGGTTTTATGTTATTTTTGAGTAAATAATGATGTGTAT
ACAGGATCAAGGCTAGTCACTAGTCAATTAAACTTTGTACTCTCAATTGG
TTTTCGAGCTATACTTTTCTTTAGGGTACGCACCTCTGGGCCACCCCTTT
TACCAGCTTACCATTTGCTTTCAAATATTTATATAAGAGAGTCCATTGAA
AAACGAGCATACAATACATATCAATTGGCATGATGTTTCAAGATCTTTCC
CCACTACGTGCCTTTTATGAtctaatctttttttaaattccaaCTGGCGT
GGATACACTTCTTAGAAAGACCTCTAGCGGCAATGGTATTATAATAATAG
TAGTATAATATGATCAAAgttcgaaattttctttacaATACCTGTATGAT
CAAATTCCTAAACCATGTTCTTTCGAATTTTTAGACTTATCCTCTATCTG
TGTTAGACTTTTTTGTTGGCTCTTCTATATTttaagcatagtataagaaa
gccgcggctttcttatactatgtttTAAGGAAACCTCGAAGAAGCGAGTG
ATTCTGTTTATTTCTCTTATTATTTTCCCATGTCAGCTGCACTGTCAAAC
ACTTGACAATATACGTCCATACAAATGTATCATTTTTCATCAACATTTCT
AAAGATATCAAACTATCTATTCTAAGAGCTTAATTCCTTTCATATGATCA
GACGTTAAGTGCCCGGAATGCCATTCCATGCAtttattttgtaatatttt
tgttCGGAAACTATGGACAAATTATGGGAGGTATTTTGGGTGTCTTACCC
CCTTATACTCCCCCTCTGTCATATTTTCGTTTGGAAGTGACCAAAAAGAA
CTTATTAACAGTAATGAAGTTAACAGCTTTAAGTTATAAAGCAAGTAAAA
TGggacatgggaataaaatcgcGTGAACTTTTTTCTAGTAATCAAGAGTT
TTGAATGcatttgcaacccgtgtattctATTGTGCTCGATAGTACTGAGG
TCtaatcaatgaagtataagcccgaagggctagaagtcaatttccttggt
aggatttgaagccaacaaatcctaccaaagttgcgcggccttgagcggct
cgcctggtttttacacaaatgacagattgaaacNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtaaacaaaggaatt
gctagattcaatctgtcgtcaaaaatatggcgcattttttaaggcttcac
tttttcttgcctgagaaaggttagagattgaactctagcccttcgggctt
taaactcaatgggtctaatccacaCCGATTTCTCTGCCAGAACGTTGGCt
agtaaaatttgaatttaactcAGAAGCTACATGAATCTTGATCTTGATAT
GCGTCAATAATCAATGGATgagatctttttttttctgtcaGGCACACCCG
AAGAAATTTTACCTCTGTTTGTTACTAAAAAGATCGAAATAGGCGCGATG
TACGCATATTAAAAATACGATTCCCCAAAAATATAGGAGAATAGTCCAAA
ACAGTACATAAAACGGACTACTAAATCGGTCGTTCCATGCAATTTGGCAT
AAAATCGACACAATAGATTATAGAAGGAATGTTGATATACAACATACCAA
TAAACGTTAGCTTCTCAAAGTATTGCCCAATCTTTTATTACTAGTACAGT
TACTgcttaatttgaaaattttttgactgtTTGTATAAAATGCACTTCAC
TTTTTAAAACAAACATAGCAGATATATTTGGCACCATAAAAAGCCTCTTA
TCCCTTCCTCCTTGCGgtcaaatgtttttatttgtgcTTTTTATCGCAAA
TGCGCCTCCAATGGTAAAGGCcgaggtaaacgattccaacatttcatcca
acatagaAATTGAAATGTTGGACGAATGTTGGATGAATTTTGGAAAGGTG
TCGTTTCGTCGCAATGTCCAGcatcattttcatccaacatgggtgttcat
tcattctttttttaattcattcttttcaaattaGAAATGGTGAGAATTTT
TATACCCAGTGTAACCAGTGCCACTACTGCTGTTCATGCGGACAAAAATT
ATAGTCTAACAATTGGAATTTTAAAATGCAGAGAAAATTCTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCTCATTTTTTACACAtat
acagtgcattttgggaagcCTGAAAAACGTACCTTTAAAGGGTCACACCT
CTACGATAGATCGCTTAATTTCagtgcccggggggggggcacttggttta
ttttccgaaaaaaaaacattcgagcTAGTAGCTTCTCTACCATTTTAAAT
TTGTTACgagatttttcgaatttttgacaaaaaaacattcgattctaTTT
CTAATTCCCTTTCAAATGTTGGATGTGAGCTGAGTAAACGAATCCAACAT
GATCCAACACGAAAAAAATAAGTAAATGTTGGacaaaatgtttgatggcg
atcaaactcCCACCCAACACTTTTTTCCTTCTtccaacataattttttct
tcctttccgATTTTTACATTCgagtaaacgattccaacattccgTCCAAC
AGAGAGAAAATGGCATGTTGGATGGAATGTTCGAATCGTTTACCTCGGCC
TTAATGGCTATTGATAAATCTGACTTTAAGTATTATAACTTTGAATAACT
TTAGCCTTAGGAGTTCTATACAGTGGAAATTCGAATCGGCTTTGATTTTC
ACTTTTACAGTCGGTTGTCGCTATTTCAAAGTCAAACGGGCAAATCTAAT
GCATTTGAATTATACAAAATATATTATGAGCGTCACAAAATTAATTCGAA
TATTTATGAAGTTCAAATTTGCGAGGGTTTACAGTATGTTTGATATTGAT
CTTCCAATTTTCGCCGGACCGTTGCATTTACCCTGTCTTTAAGCCTCTAT
GATGTATTGCTTGTAACCAAGGGATAAGATTTGACAGGGTTAAATTGTCA
TAAAGCTAGGGACAACTTTTTCATTATCATATATTAAAGCATGACCGTAG
AGcgtccagctacggtgcgcaaggctaggggttcgatccccagccgggtc
ataccaaagattcccaaaatggtattTGATACCTCTCTTtttggcgccct
cccctaccttcgggtagacagctatacgtaaagggagccttcgggtcgcc
ctcaaCTGTGgttgcaaacttacttacttatatacacccctgtgtcacag
acccactgggaccccagccccactggaaaacttggcaaaaatttcgttcc
cactgggaaaatgactttgatttcatccccactcgaaattcaatgtgtaa
aaattgtactccaaaaccatcaccactggatttttaaccttggaacaata
gaatttctatccccattgggatttcaataggaatttttttccctactgag
aaaaaaagttccagtaTGGCTGTGAGACGGGTGTATATACAGTATTCAAT
TTGTTTGAAGCTTTATACTTTGagaaaagcctaaaaagaagaCAGAAAAT
AATAAAGATTCCTCCCCTTCTTTTATCCGACAAGGCATACATCCTAATAA
ATCAATTAAAGCAATATGTCAATAATTGTGTCGCAAAAATGCTAGTATGG
ATCACTATGCCGAAGCATGTCTAAACAGAAATTGTCTTCAAAGACACATT
TaatatatcaaaaatatttctaaaactGTTTGCGACCTTTTTAAGGtttc
attttatcattttaccGAGTACAAGGTCCATTCTTGACAGGAATGGATGA
ATAAAGTTGAGGAAAATGAGACTAATCAGAATTTGTATGGGAATTTTAAT
AAGTTGGGATCCCATTTGGGATATGGAAAAAGTAAAGCAATATGATAAAT
ATCATCCTTAGCTTTATAACTTCATTTAAAGTAATCACAAACTTTCCTGC
CTTCAACTCTTCTCTTTTTTACAACGTTCTACAACTCCTACATCGCATGT
CAGCATACTCTCACGAACGCATTCAAAGTTGCATAAGTCAGCAGTTGAAC
AGTTTTTGTCCGTGACAATGATTTTTTAGTCCAGTCCTTTTACCtataat
gtaaacaaattcataGCACGTCCAAAGAGTAGGATTAGATATAGAGAACA
CCGTTGACtattaacaaacaaacaaggaatgtCTATGGATGTTGCAATGT
TTCGTTCACTTTTTTATTAGatatcatacacgttttttttgtgagaatat
ctaaaaattttgaagccttcgaatgtgctcttaaccttttgagttttaag
cctaaaaatgttctcaacatgttctaattttcaccattttgtgagtattt
ttgcccatttctttaagaaatcaggtgtattagagtctgcgaagccttaa
aatgttctcctAACTTGTTCCTAATATTTTGCCCATCGAACCCTCatttt
ttatatagtttttccttataaaaaagcgtgttttATTGATCAAAATCTGT
TAACTTTCCCTTGCACAATGTGTCTACTAATCAATATGTTGGCAGCTTTT
TTCCGATcctttaaaaatcgaatttaaGACAGTCTTGTTTCATAAAGGCT
TTAAAAAGTAGATTTACCATGATCTTGCATTCCTTCTATTGGGAGAACTA
TCCTACTTCCCCCAATGGCTGACGGGTATTTAAAGTTTTCAccaaatgaa
aataaacaatCGAGTACTTTCTCAATTTATAAATTCGAAATGTAAATTCC
GAACCACAACCGGTTTTACAACGGAAATAACATTCGAGGTTTTTTATTAC
CTATATTTCCTGATACTCGATATGGTGTTAATTCATTCTGAATTCCGAAA
CTATGCGATGTTCCTAAACACTTAAGTCCTCGAGAGATTTATagctttca
tattttttttctaaaatcaataGCCAAAACGGAAGGATGTTGTTCTTAAT
CCatatttttgttacttttatgTCTGGGAGGATGAAAAGGGAGTAGAAAG
GGATGAATTGAAATATAGTCTACTATGCAGACTTAACGTCGCCCTTTGAT
CATTTTGATGACGTTGACTCAGCAACTTAATCGTCTCAACCGGATTTATC
AAAAGCTAACTggccggggttttttataaatagGAAAATTTACACGGTTT
TTGTTTGACCGAAATAACATCAGTAGAGTTTCATGGTGAAGGTTTCACGG
CTGGCAGATAGGAACGGAAACAAGCCTTTTTCTGGCCCGGGGTGGAGGAA
CTAGACGAAAATTTGGACggaattttcgaaattaagccCTATGTCGGAGA
CAGAAACTTGGGTCGCTTTAGTCCGTATAAAACGGAAGTTTgtatattca
aaatttccagcattttcgcgCAAATCTAGTATtgcaaagaaattttttgt
gacGAAATTTAAGGGGGAAAAATGACGGGATGCAGTAGcatagacaggag
gggcgcaaaatttgtgtaagagagcagatttttatgacgctgtaactatc
tattcataatataaaagataattactgtgtaATAAagatctgctctccta
cacaaattttgtgcccctcttgtctacgctactgggaTGGGAGAATCAGA
TACTGCCCCCTGAACCTCCTTTAATGATCCTATTTACAAATTCTGGTCTA
TGATAAATACATTTAAATGATACTATATTGTCCCTTAGGTTATCATTACG
CACCAATCATGTCAGCCAAGAGATGATCAATATGGACATTACACTTGTAT
CAAGGGCCACAAAGAATGCTTGCCAAATTGGTACGACCCGAGCAGGAATT
GCTTAGGTATGCATTTAATTACACCCTATGATAATAATTTATGGTTTGCA
AGGATTGTTATTCCTTCGCTACAAATCTTTTAttaaaatgtgttttgatt
ttttgaaacgcGTTTACTCtgaacgttttttttataacactTTTGTAAGA
AACTtagaggctgaaaatggtccgaaaaataaggaattgttatttaggaa
ctgctcaggctgagaataagaaattAAGTTAAGGAATAGAAAGTCAAACT
TCAACTTGCTCACATTTACAAAACTTgaacaaaaaaatgacaaaatattg
aCGAAACAACATTCAATAAACGCCTTTTTCTTTACTGTAGTCCAGTGTTA
TACTTAGACATTCGTTACATACTTAGCAAATCCAATTTTAGCAGTCAAGT
CAATAAGGataactcgataaggaactttgaagctgaaattctctggaaaT
CCAGGTTCGGAGCCAATTTAAGGTTCCTTACAAAAAAAACGCGTATTTAA
TTTATGTAATGTAAAATCCCAGGCATTATGTTTTTGTATGTTTTCTTTTA
CCTGAGTGGCAATATTATGAAAGAGATGTTCGAATTACTTAGAAATCGTA
TGATTTTTATAACACCGAGGTCAAAAGGAGATCCTCCACTTCAATGACCT
TTCATTTTCCAATTTCACAATGTTTGTTGTCAGTTGTGAAATATCTTATA
CATTTCTATCATTATGCAGTTTTGAAAATCCCCAATTGGAGAAcgaaacc
gacccttaccgccTGCACATACATACCCAGCCCctttttgcctaagtatc
ccccccAGGCTACCTTCCTTCAGGAGTAGTCTGTCTATCTAGCTATGTTA
TGAAAGCTGATCTTCAGGGTCAATGTGGCAACGTTTTAGGTTAACAAAAA
GACACTATAATTGAATTGCTAGACTGATGATATGTTCTTCTTTTAGAAAC
ATGCAGTATTCCAACAGACGATCGAAAAGATTGTGGTTTCCATGGAATCG
ATAAGCAACATTGCATAGCAAAAAAAGGTTGTTGTTGGAAAGAAAATCAC
GAGAATAGAAAAATACCATGGTGTTTTCACGGTGAGCTTTTTAGTAAAGT
TTTTTTACTCAACCTTTTCCTTTGTATCCCTCCCCAGCTATTATCTACCT
AGTTCTAAAGCAGTTaattctgaaagtttttttgtaaaacatGTCAAGCT
TTTTTAGGTAGGCTTTTAGTTCGAGCTAAAAAAAACTCGAATAAtgttag
ttcgaattagagggaGACGCCCTACTTGTACTACAGCATAATTTCAAAGA
GCCGACTTCGagtcaaacaaaataatatTGTTAGATGAAGGCATGTGTAA
AGgtaatttaaattttgattgcGAAATCGGCTATGATGTTGTTGTAAAGT
CCATAGAGGCCAGATAATAATACTACTAGTAAAAATAGGTGTCAACTTTG
GATGCAGTCCAAAATCACTAATATAATCCTACACAAAATACTACACtgtt
atacttttttttgaagttgtttaaccgccaaattaatttttattgtaaaa
taatttttagccTTTGAAtttacagtagagtctctatCTATAACTTGAAC
ATGTGCACAAgactaaaatttgttcgagtcaTTGAAAATTCGAGTTATAA
TATTTTCTTCATGGGTTTGTTATCTGAAGGGAACGTTAAGGAAACATCTC
ATGTCGAGTTACAGAGCTTTGTCAAAAGCTTTGACTTTTACatttgggta
gatagctatcaaaagagAAATCTTCGGGtagcctccgactgcggtcgcta
ATAGTTAATGTGAGCTTTCACCTCTGATAAACTTGTAGGCAAATATGTGG
CACCTCCACCAACGCAACCTCCTTCGACAACTCCATCGTCCTCATCTTCA
AGTGAACCACCATCGATATCATCAACAAAATCATCAACAACTTTATCACC
GTCTTCAACAACGTCCACAATACCTCCAACAACCAGTTCGCTAGCAGTTa
aaccatcattttcaaaatcttttcttCTTGCAACTTCAAGCTCAGCAAAT
GATATCCGGCCATCCTCAAGTAAGTTTTTTTGAGTATTAAtgcaaaaata
ttattttaaaacttgttgtttttcaaaatacattTATTGGAAGAGAGATT
ATGTTCCAATTTACAAGAATTAAAATTACTTTAAATGTCTACAGTTATTA
CAATGATCCGCTATCAAATATATTAACTTTTTCTCCCTGGTGATTGGGAC
CTACTCCTTTTGAAGAATTACAGATCGGGTTGACCATTTTAATTGAATAG
AACTAAGAAATTTGTATACTATATCGAAATATTAGAATCACCTTACACAG
TCTTTTCGAATCGATTTCAAGATAATGCTCCAAAGAGCATTTAAAATTCT
AAATCTCTTACTTTAGGTCATGTTGCAGCATTGTCTTCAAGCCAGTCAAC
TAGATTTCAACAATCTTCTTCAACAAAATTGGAACCATCTTCATCAACAA
TAAATGTTGTCAAACCTTCATCAACAAAATCTATTCAACAAAGTTCACCa
gcacaaaaacaaacatcatcTGTACTCATATCATCCAACTCTCAAAAAAT
TCTTAAACCATCTTCAACAAAATCGAGAACAAAATATTCACCATCTTCAA
CAAAAGAAGTTAAATCCACGCCAATCAAACATATACAACCTTCAACCAAC
GTTCTAGTTTCTTCATCCTCAACAATAAAATGTCATACTCAACAAATAAT
ATCAACAATTACAGTAACAAAACTTATAAaacaatcttgctccaatcAAA
AAGTTCAATCAACCCAAAGAAATAGCAAAATTTCCAACATTTATCAAACT
AGTACTCACATTCAACCAAGAAAATCCTCTTCAAAAAACATTCAACCATC
ATCTTCagtcaaacaacaacaacaacaaaactcCTGTATAAACACTGGAC
AACTTGGCAATTCTGATGAACGAATAGCTGGCGTTGAAAAGACACCAATG
TTGATCATCATTATTCTCGGTGTATTGCTCCTCTTCTTCATGATTGTCTC
CATCTTCCTCTTCTGTAAAGAACAAAGGTAAACATTTCTCATTATTATTG
AGTTTATGTagagttgactctctctaattcgatcttcaagggactaaatg
ttctcttcgaattagagaaagatttgaataacagagagtaatttaaacca
cttacCAGCTGAGAAGactaatattttagttcgaattatagaaagattcc
atttatagaagttcgaattacagagagttgactgtattcGAGTTAAATCT
AAGGAGGCAGTTTATAGCAAAGTAGTCGTGTCTCTAAAATCGCCGTCCAT
TTTGCTCTGCGacggtaaaaaaaacaaaataccgtcgtctagTTAGAtga
ggcgatatagagccgtacatcaactatcgacattgttttgtatcgatttc
acttaccgttgCGCTCAATATCCTCCCGATACATACTACTGTATTCATAA
TATTCACTGATAGTAGGGGCCATTCTTTAGGACCCGTGACAAAAATTTCC
Ggagtggaattttttttgcctattcgaaagaagaatgtatttagaaactt
ttttgagagggagtAAATTGATTAGGTCCAGCGATTTTTTCATGGGGAAA
AgactgacgtcacaagcaaaaaccCTTAGGACCCGAAATTTGACGAAAGT
CGCTAAAACACAAAACCACTTATAcctttggaaagctctcaaaaaacgaT
ATAGAGGACTTTTAAGCGGATATGGTCGATTTCTCAacgtaactcgagaa
aattaacGCCAAACATCGAGAAAACGTCACTTTGGCACCGTTTTTCTTGA
GTTACGTTGAGAAATCGACCATATCCGCTTCAAGGTCCTCTAGTATAtcg
tttttcgagagctttccaaTGGTATAAGTGGTTTTGTGTTTTAgcgaatg
aacaaaaaaaactCCACTCCGGAAATTGTTGTCACTGGTCCTAAAGAATG
ACCCCCTACTATAtaagtaatgttttctacggaaacaaTCCGGTTTTTTA
CCAGTTGTGgcaaattttcttaattttgaatttgttaAATTTTGCCACTA
CTGATTAAAAACCCGTGGTCTTTCCATAGTAAACACTCGTCCTTATTTCA
ATAAACTTTATTCAGGCAGCAGTTGCCTTATTTTAGCCATCCAAGTTACG
CCCGGTCTATTACCCTTTGGAAATTATTTTAGTCTTAgatattttacttt
tgtttaatCCAAAAGTCCTACTTTTGATTCCTGAACGTTGGAATCTCTGT
CTGTCTTAGGATAGAGCCTTTTTTCCCGcgacatgaaattttatttACGC
ATGTATcaatctgtctgtctgtctatcTGTATATTTGTTGTGATAAATAT
TCCATTAATTTTAATGTAGGTTAAAGAAGCGATACGAGAAATTTGAAAGT
GGTCAATTTGCATTAAACTTCAAGAATCCGGTTTTTGCTGATAAAGCCAT
GAACATTTATGAATAACAGATGttgaaattcgttttttttttttttgcaa
gaaaCAATTTCTGCAATCTGACGAAGTATTCAAATTGTTGATTAGCTGAT
GTTTATGCGTTAAATAAATGACATGTTTTCCTGCACTTGAATCACAAATT
TGACGTAAATTGCACtatttttgtacatatttttatAGACTTGTAGATGt
ttcaaatttcttaaaatcatGATTCTCtttccaaa

Coding sequence (CDS) from alignment at scaffold_362:311657..322991+

>TCONS_00062175 ID=TCONS_00062175|Name=TCONS_00062175|organism=Clytia hemisphaerica|type=CDS|length=7704bp|location=Sequence derived from alignment at scaffold_362:311657..322991+ (Clytia hemisphaerica)
atgaagagAATTTTATTTACTTTCTTGCTTCAATTCTTACAGGTTATCAT
TACGCACCAATCATGTCAGCCAAGAGATGATCAATATGGACATTACACTT
GTATCAAGGGCCACAAAGAATGCTTGCCAAATTGGTACGACCCGAGCAGG
AATTGCTTAGAAACATGCAGTATTCCAACAGACGATCGAAAAGATTGTGG
TTTCCATGGAATCGATAAGCAACATTGCATAGCAAAAAAAGGTTGTTGTT
GGAAAGAAAATCACGAGAATAGAAAAATACCATGGTGTTTTCACGGCAAA
TATGTGGCACCTCCACCAACGCAACCTCCTTCGACAACTCCATCGTCCTC
ATCTTCAAGTGAACCACCATCGATATCATCAACAAAATCATCAACAACTT
TATCACCGTCTTCAACAACGTCCACAATACCTCCAACAACCAGTTCGCTA
GCAGTTaaaccatcattttcaaaatcttttcttCTTGCAACTTCAAGCTC
AGCAAATGATATCCGGCCATCCTCAAGTCATGTTGCAGCATTGTCTTCAA
GCCAGTCAACTAGATTTCAACAATCTTCTTCAACAAAATTGGAACCATCT
TCATCAACAATAAATGTTGTCAAACCTTCATCAACAAAATCTATTCAACA
AAGTTCACCagcacaaaaacaaacatcatcTGTACTCATATCATCCAACT
CTCAAAAAATTCTTAAACCATCTTCAACAAAATCGAGAACAAAATATTCA
CCATCTTCAACAAAAGAAGTTAAATCCACGCCAATCAAACATATACAACC
TTCAACCAACGTTCTAGTTTCTTCATCCTCAACAATAAAATGTCATACTC
AACAAATAATATCAACAATTACAGTAACAAAACTTATAAaacaatcttgc
tccaatcAAAAAGTTCAATCAACCCAAAGAAATAGCAAAATTTCCAACAT
TTATCAAACTAGTACTCACATTCAACCAAGAAAATCCTCTTCAAAAAACA
TTCAACCATCATCTTCagtcaaacaacaacaacaacaaaactcCTGTATA
AACACTGGACAACTTGGCAATTCTGATGAACGAATAGCTGGCGTTGAAAA
GACACCAATGTTGATCATCATTATTCTCGGTGTATTGCTCCTCTTCTTCA
TGATTGTCTCCATCTTCCTCTTCTGTAAAGAACAAAGGTTAAAGAAGCGA
TACGAGAAATTTGAAAGTGGTCAATTTGCATTAAACTTCAAGAATCCGGT
TTTTGCTGATAAAGCCATGAACATTTATGAATAAatgaagagAATTTTAT
TTACTTTCTTGCTTCAATTCTTACAGGTTATCATTACGCACCAATCATGT
CAGCCAAGAGATGATCAATATGGACATTACACTTGTATCAAGGGCCACAA
AGAATGCTTGCCAAATTGGTACGACCCGAGCAGGAATTGCTTAGAAACAT
GCAGTATTCCAACAGACGATCGAAAAGATTGTGGTTTCCATGGAATCGAT
AAGCAACATTGCATAGCAAAAAAAGGTTGTTGTTGGAAAGAAAATCACGA
GAATAGAAAAATACCATGGTGTTTTCACGGCAAATATGTGGCACCTCCAC
CAACGCAACCTCCTTCGACAACTCCATCGTCCTCATCTTCAAGTGAACCA
CCATCGATATCATCAACAAAATCATCAACAACTTTATCACCGTCTTCAAC
AACGTCCACAATACCTCCAACAACCAGTTCGCTAGCAGTTaaaccatcat
tttcaaaatcttttcttCTTGCAACTTCAAGCTCAGCAAATGATATCCGG
CCATCCTCAAGTCATGTTGCAGCATTGTCTTCAAGCCAGTCAACTAGATT
TCAACAATCTTCTTCAACAAAATTGGAACCATCTTCATCAACAATAAATG
TTGTCAAACCTTCATCAACAAAATCTATTCAACAAAGTTCACCagcacaa
aaacaaacatcatcTGTACTCATATCATCCAACTCTCAAAAAATTCTTAA
ACCATCTTCAACAAAATCGAGAACAAAATATTCACCATCTTCAACAAAAG
AAGTTAAATCCACGCCAATCAAACATATACAACCTTCAACCAACGTTCTA
GTTTCTTCATCCTCAACAATAAAATGTCATACTCAACAAATAATATCAAC
AATTACAGTAACAAAACTTATAAaacaatcttgctccaatcAAAAAGTTC
AATCAACCCAAAGAAATAGCAAAATTTCCAACATTTATCAAACTAGTACT
CACATTCAACCAAGAAAATCCTCTTCAAAAAACATTCAACCATCATCTTC
agtcaaacaacaacaacaacaaaactcCTGTATAAACACTGGACAACTTG
GCAATTCTGATGAACGAATAGCTGGCGTTGAAAAGACACCAATGTTGATC
ATCATTATTCTCGGTGTATTGCTCCTCTTCTTCATGATTGTCTCCATCTT
CCTCTTCTGTAAAGAACAAAGGTTAAAGAAGCGATACGAGAAATTTGAAA
GTGGTCAATTTGCATTAAACTTCAAGAATCCGGTTTTTGCTGATAAAGCC
ATGAACATTTATGAATAAatgaagagAATTTTATTTACTTTCTTGCTTCA
ATTCTTACAGGTTATCATTACGCACCAATCATGTCAGCCAAGAGATGATC
AATATGGACATTACACTTGTATCAAGGGCCACAAAGAATGCTTGCCAAAT
TGGTACGACCCGAGCAGGAATTGCTTAGAAACATGCAGTATTCCAACAGA
CGATCGAAAAGATTGTGGTTTCCATGGAATCGATAAGCAACATTGCATAG
CAAAAAAAGGTTGTTGTTGGAAAGAAAATCACGAGAATAGAAAAATACCA
TGGTGTTTTCACGGCAAATATGTGGCACCTCCACCAACGCAACCTCCTTC
GACAACTCCATCGTCCTCATCTTCAAGTGAACCACCATCGATATCATCAA
CAAAATCATCAACAACTTTATCACCGTCTTCAACAACGTCCACAATACCT
CCAACAACCAGTTCGCTAGCAGTTaaaccatcattttcaaaatcttttct
tCTTGCAACTTCAAGCTCAGCAAATGATATCCGGCCATCCTCAAGTCATG
TTGCAGCATTGTCTTCAAGCCAGTCAACTAGATTTCAACAATCTTCTTCA
ACAAAATTGGAACCATCTTCATCAACAATAAATGTTGTCAAACCTTCATC
AACAAAATCTATTCAACAAAGTTCACCagcacaaaaacaaacatcatcTG
TACTCATATCATCCAACTCTCAAAAAATTCTTAAACCATCTTCAACAAAA
TCGAGAACAAAATATTCACCATCTTCAACAAAAGAAGTTAAATCCACGCC
AATCAAACATATACAACCTTCAACCAACGTTCTAGTTTCTTCATCCTCAA
CAATAAAATGTCATACTCAACAAATAATATCAACAATTACAGTAACAAAA
CTTATAAaacaatcttgctccaatcAAAAAGTTCAATCAACCCAAAGAAA
TAGCAAAATTTCCAACATTTATCAAACTAGTACTCACATTCAACCAAGAA
AATCCTCTTCAAAAAACATTCAACCATCATCTTCagtcaaacaacaacaa
caacaaaactcCTGTATAAACACTGGACAACTTGGCAATTCTGATGAACG
AATAGCTGGCGTTGAAAAGACACCAATGTTGATCATCATTATTCTCGGTG
TATTGCTCCTCTTCTTCATGATTGTCTCCATCTTCCTCTTCTGTAAAGAA
CAAAGGTTAAAGAAGCGATACGAGAAATTTGAAAGTGGTCAATTTGCATT
AAACTTCAAGAATCCGGTTTTTGCTGATAAAGCCATGAACATTTATGAAT
AAatgaagagAATTTTATTTACTTTCTTGCTTCAATTCTTACAGGTTATC
ATTACGCACCAATCATGTCAGCCAAGAGATGATCAATATGGACATTACAC
TTGTATCAAGGGCCACAAAGAATGCTTGCCAAATTGGTACGACCCGAGCA
GGAATTGCTTAGAAACATGCAGTATTCCAACAGACGATCGAAAAGATTGT
GGTTTCCATGGAATCGATAAGCAACATTGCATAGCAAAAAAAGGTTGTTG
TTGGAAAGAAAATCACGAGAATAGAAAAATACCATGGTGTTTTCACGGCA
AATATGTGGCACCTCCACCAACGCAACCTCCTTCGACAACTCCATCGTCC
TCATCTTCAAGTGAACCACCATCGATATCATCAACAAAATCATCAACAAC
TTTATCACCGTCTTCAACAACGTCCACAATACCTCCAACAACCAGTTCGC
TAGCAGTTaaaccatcattttcaaaatcttttcttCTTGCAACTTCAAGC
TCAGCAAATGATATCCGGCCATCCTCAAGTCATGTTGCAGCATTGTCTTC
AAGCCAGTCAACTAGATTTCAACAATCTTCTTCAACAAAATTGGAACCAT
CTTCATCAACAATAAATGTTGTCAAACCTTCATCAACAAAATCTATTCAA
CAAAGTTCACCagcacaaaaacaaacatcatcTGTACTCATATCATCCAA
CTCTCAAAAAATTCTTAAACCATCTTCAACAAAATCGAGAACAAAATATT
CACCATCTTCAACAAAAGAAGTTAAATCCACGCCAATCAAACATATACAA
CCTTCAACCAACGTTCTAGTTTCTTCATCCTCAACAATAAAATGTCATAC
TCAACAAATAATATCAACAATTACAGTAACAAAACTTATAAaacaatctt
gctccaatcAAAAAGTTCAATCAACCCAAAGAAATAGCAAAATTTCCAAC
ATTTATCAAACTAGTACTCACATTCAACCAAGAAAATCCTCTTCAAAAAA
CATTCAACCATCATCTTCagtcaaacaacaacaacaacaaaactcCTGTA
TAAACACTGGACAACTTGGCAATTCTGATGAACGAATAGCTGGCGTTGAA
AAGACACCAATGTTGATCATCATTATTCTCGGTGTATTGCTCCTCTTCTT
CATGATTGTCTCCATCTTCCTCTTCTGTAAAGAACAAAGGTTAAAGAAGC
GATACGAGAAATTTGAAAGTGGTCAATTTGCATTAAACTTCAAGAATCCG
GTTTTTGCTGATAAAGCCATGAACATTTATGAATAAatgaagagAATTTT
ATTTACTTTCTTGCTTCAATTCTTACAGGTTATCATTACGCACCAATCAT
GTCAGCCAAGAGATGATCAATATGGACATTACACTTGTATCAAGGGCCAC
AAAGAATGCTTGCCAAATTGGTACGACCCGAGCAGGAATTGCTTAGAAAC
ATGCAGTATTCCAACAGACGATCGAAAAGATTGTGGTTTCCATGGAATCG
ATAAGCAACATTGCATAGCAAAAAAAGGTTGTTGTTGGAAAGAAAATCAC
GAGAATAGAAAAATACCATGGTGTTTTCACGGCAAATATGTGGCACCTCC
ACCAACGCAACCTCCTTCGACAACTCCATCGTCCTCATCTTCAAGTGAAC
CACCATCGATATCATCAACAAAATCATCAACAACTTTATCACCGTCTTCA
ACAACGTCCACAATACCTCCAACAACCAGTTCGCTAGCAGTTaaaccatc
attttcaaaatcttttcttCTTGCAACTTCAAGCTCAGCAAATGATATCC
GGCCATCCTCAAGTCATGTTGCAGCATTGTCTTCAAGCCAGTCAACTAGA
TTTCAACAATCTTCTTCAACAAAATTGGAACCATCTTCATCAACAATAAA
TGTTGTCAAACCTTCATCAACAAAATCTATTCAACAAAGTTCACCagcac
aaaaacaaacatcatcTGTACTCATATCATCCAACTCTCAAAAAATTCTT
AAACCATCTTCAACAAAATCGAGAACAAAATATTCACCATCTTCAACAAA
AGAAGTTAAATCCACGCCAATCAAACATATACAACCTTCAACCAACGTTC
TAGTTTCTTCATCCTCAACAATAAAATGTCATACTCAACAAATAATATCA
ACAATTACAGTAACAAAACTTATAAaacaatcttgctccaatcAAAAAGT
TCAATCAACCCAAAGAAATAGCAAAATTTCCAACATTTATCAAACTAGTA
CTCACATTCAACCAAGAAAATCCTCTTCAAAAAACATTCAACCATCATCT
TCagtcaaacaacaacaacaacaaaactcCTGTATAAACACTGGACAACT
TGGCAATTCTGATGAACGAATAGCTGGCGTTGAAAAGACACCAATGTTGA
TCATCATTATTCTCGGTGTATTGCTCCTCTTCTTCATGATTGTCTCCATC
TTCCTCTTCTGTAAAGAACAAAGGTTAAAGAAGCGATACGAGAAATTTGA
AAGTGGTCAATTTGCATTAAACTTCAAGAATCCGGTTTTTGCTGATAAAG
CCATGAACATTTATGAATAAatgaagagAATTTTATTTACTTTCTTGCTT
CAATTCTTACAGGTTATCATTACGCACCAATCATGTCAGCCAAGAGATGA
TCAATATGGACATTACACTTGTATCAAGGGCCACAAAGAATGCTTGCCAA
ATTGGTACGACCCGAGCAGGAATTGCTTAGAAACATGCAGTATTCCAACA
GACGATCGAAAAGATTGTGGTTTCCATGGAATCGATAAGCAACATTGCAT
AGCAAAAAAAGGTTGTTGTTGGAAAGAAAATCACGAGAATAGAAAAATAC
CATGGTGTTTTCACGGCAAATATGTGGCACCTCCACCAACGCAACCTCCT
TCGACAACTCCATCGTCCTCATCTTCAAGTGAACCACCATCGATATCATC
AACAAAATCATCAACAACTTTATCACCGTCTTCAACAACGTCCACAATAC
CTCCAACAACCAGTTCGCTAGCAGTTaaaccatcattttcaaaatctttt
cttCTTGCAACTTCAAGCTCAGCAAATGATATCCGGCCATCCTCAAGTCA
TGTTGCAGCATTGTCTTCAAGCCAGTCAACTAGATTTCAACAATCTTCTT
CAACAAAATTGGAACCATCTTCATCAACAATAAATGTTGTCAAACCTTCA
TCAACAAAATCTATTCAACAAAGTTCACCagcacaaaaacaaacatcatc
TGTACTCATATCATCCAACTCTCAAAAAATTCTTAAACCATCTTCAACAA
AATCGAGAACAAAATATTCACCATCTTCAACAAAAGAAGTTAAATCCACG
CCAATCAAACATATACAACCTTCAACCAACGTTCTAGTTTCTTCATCCTC
AACAATAAAATGTCATACTCAACAAATAATATCAACAATTACAGTAACAA
AACTTATAAaacaatcttgctccaatcAAAAAGTTCAATCAACCCAAAGA
AATAGCAAAATTTCCAACATTTATCAAACTAGTACTCACATTCAACCAAG
AAAATCCTCTTCAAAAAACATTCAACCATCATCTTCagtcaaacaacaac
aacaacaaaactcCTGTATAAACACTGGACAACTTGGCAATTCTGATGAA
CGAATAGCTGGCGTTGAAAAGACACCAATGTTGATCATCATTATTCTCGG
TGTATTGCTCCTCTTCTTCATGATTGTCTCCATCTTCCTCTTCTGTAAAG
AACAAAGGTTAAAGAAGCGATACGAGAAATTTGAAAGTGGTCAATTTGCA
TTAAACTTCAAGAATCCGGTTTTTGCTGATAAAGCCATGAACATTTATGA
ATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_038981XLOC_038981Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062175-proteinTCONS_00062175-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062175-exon-scaffold_362-1491911889:311657..311848TCONS_00062175-exon-scaffold_362-1491911889:311657..311848Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1510915933:311657..311848TCONS_00062175-exon-scaffold_362-1510915933:311657..311848Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1575043694:311657..311848TCONS_00062175-exon-scaffold_362-1575043694:311657..311848Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1491911889:318145..318262TCONS_00062175-exon-scaffold_362-1491911889:318145..318262Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1510915933:318145..318262TCONS_00062175-exon-scaffold_362-1510915933:318145..318262Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1575043694:318145..318262TCONS_00062175-exon-scaffold_362-1575043694:318145..318262Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1491911889:319203..319337TCONS_00062175-exon-scaffold_362-1491911889:319203..319337Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1510915933:319203..319337TCONS_00062175-exon-scaffold_362-1510915933:319203..319337Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1575043694:319203..319337TCONS_00062175-exon-scaffold_362-1575043694:319203..319337Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1491911889:320095..320325TCONS_00062175-exon-scaffold_362-1491911889:320095..320325Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1510915933:320095..320325TCONS_00062175-exon-scaffold_362-1510915933:320095..320325Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1575043694:320095..320325TCONS_00062175-exon-scaffold_362-1575043694:320095..320325Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1491911889:320673..321333TCONS_00062175-exon-scaffold_362-1491911889:320673..321333Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1510915933:320673..321333TCONS_00062175-exon-scaffold_362-1510915933:320673..321333Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1575043694:320673..321333TCONS_00062175-exon-scaffold_362-1575043694:320673..321333Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1491911889:322676..322991TCONS_00062175-exon-scaffold_362-1491911889:322676..322991Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1510915933:322676..322991TCONS_00062175-exon-scaffold_362-1510915933:322676..322991Clytia hemisphaericaexon
TCONS_00062175-exon-scaffold_362-1575043694:322676..322991TCONS_00062175-exon-scaffold_362-1575043694:322676..322991Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:311657..322991 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.706913	1.11932	1.04789	0.917068	1.13594	1.31926	0.434871	5.08587	6.30043	4.4493	9.28428	2.45089	1.50725	1.85098	4.84228	2.73573	1.53969	1.99647	2.01761	0.752993	0	0	0	0.190888	0.246132
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000519P_trefoil_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062175 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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