TCONS_00062220 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062220
Unique NameTCONS_00062220
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4408

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062220 ID=TCONS_00062220|Name=TCONS_00062220|organism=Clytia hemisphaerica|type=transcript|length=4408bp
gaCATGTTAACAAAGCCATGACACGCCACCCGCTAGAGCAGAGAGGATCA
GAGCTGCGGCGACTGTGTGTTCAATTAAAAATCCTACCTTTAGTTTATTA
CACAACCTCTTGCAGCTAACTCAGGCCAATTATTGCCTTGGAGATGGGAC
CTGGATCAGGGATTATCATAACATTTCTTGCCAAGAATATTGCACCACAC
ATTGCCTGCTTTGCAAGTGACATTAATTCCCATGCATCATATTGTACAAG
AAAGACATCACTTGAAAATGGTGTTGCTGTTGAAGTGACAACTGATAATT
TGattggaagttttcaaaaaagattgcATAACAAAGTTGACATCTTGATT
TTTAATCCACCATATGTAGTAACACCTTCAGCCGAGGTAGGAACTTATGA
TTTATCAGCATCTTGGGCTGGTGGAGTCAATGGAAGAGAGGTGATTGATA
AGTTCCTCCCATTGGTTCCGGAGTTGTTATCCAAAAATGGTTTTCTATAT
TTGTTANTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCTAAAAAT
GGTTCTCTATATTTGTTAGTACTGGAGCAAAACAAACCAGaCGAAATTGT
TGAGATGATGCAGAGTAAATACAATCTACATGCAAGTCTTATAATGAAAC
GAAAGGCTGGACCAGAGTATTTAAAAGTATTTCGTTTTGAATTCATAACA
TGATTATAGACTTTTGATTACTGACGTTGTTGGACAAGAAGGAGAGATTG
AGAAGTTATCAATTGggaaagaaactttttcaattcATCCCTTGGTGGCA
AAAACATTCAAGTTAGGTTTCATAGCGTACCCAATTCCGCCATTTCGAca
atttttcctgatttttctgtgatttttgtCTTATCATATAAACAAGAATA
GAAATCTAGCACCGACTATTTCctttaaattcaagatttttgtaaaaatg
tctaGAAATAGACTTTCTTTAAACAGACTTAAACAACCCGATTTTCCATC
TTTGACAAAGTTATCAtgaagcaaagttcagccaaaaatCGACTCTCTAG
TAATAAATGAGAGAATTTATCTTGATATGTAAATTAAGTGCTTTAACACT
ATATatagaaaaagttaaaattttacaatataTCATTGATAGAATAAGAT
TATGAAACAAATTATAACAAGTATTTACAATATTGCGGTAAAAGAACGAA
ATCGTAAAATCTTGATCACCCAAATGTGTCATCAGCGAACTTAAGTCCCg
cgaaatcttgaaattttgcagatgCCGTGAATCGTAAACCCATTAAAATA
GTTTATAGTTTCCAAGTTTTCATTTCTCTGTGATTGACGTTGATTTAGTT
TTACTCAACTCAATTTGAGTCTTCTTCCTGTTCTTCCCATAAAGCTGCTG
TTTAAATTCAGTTTTTGTGTTCTTGTTCATCGCGTAGAATGCGAAAATAA
ACACACCTCGAAAAGATCGTAAAACGTCATAAACCAATCCAAAAACTGCA
TTGAGAATACTCTCATTTTCTGTCAAGTTAGATCGTTTGATTTGAACTAA
ACCCAATAATTCTGTTATTCCCAAAATGAGCATTAGTTTAATTCCAACTT
TTAGTAATCCAACGTCTTTATGTTGTCCTTTTCCAAGAGTTTTTTGAGAT
TCTCTACTCTTCTTTCTAATGGAAATCAAAAGCATACAAAGACACAACAA
ACATGTAAAATACTCAATAGAAGctggaataaaataaaatgccaAAGACC
AATACCAATTTCCGAACCAACAATATTTAGAATCTAACTCAAATACAATA
GAATCAGATTCCTTTAAGATGAGCAGAGTTCCACAAATGATCGTCGAGAT
CGCAATAGTTGCAAGCAGTCTCTTTTGAAGCATCTTCACCGATTCCTTTC
GATCAGATCTTGACAGAGATCTCTTGGTAAACTGCAACATCATATCAATG
GCAACCATTCCActccaaatcaaaacattgaccaaAGACCAATACAAAAC
CACAAAAATCCCTGTACAAGACAAAGAGCCTTTCCTTAAATGAAAATTAG
CAAGGAACATTGAATCACTGAATAGCAAAAAGGCAACAAGAACAGTAATA
TATAAACCACCAGTGTTTCTCAAGCTTTTTATTGCAGCCAAGGTAACGAG
GAACATGAGGTATGAAAACAAGCTGAAACATGTTCCAATAACCGagacat
gatattttgcatttttaacagttttggACCAATCAAATTCCTGTTGAGTC
ATTCCACTGCGAATAGCTTCGATGCATATTTGAAAACCTTCTGCAAGTGG
AAAATATTCATCAATGGGATAGACTTTTTGTTTTGCAGATTTTGGAGATT
CCCCTTCAATCAGTAAAGATCCATTTGGAGATATTTGATAGATTGATGGG
TATATTGTTTGTCTTGAACACGTTGAGTGCAAATGAAATGCCTCACAGTA
GATTTTCTCTTCAAAGACGATCCCATCCTGTATTGTGAATATTAGTTTTG
AATCCAGATTATAATCAACTGTTTTTGTCATGTTACAAGTTCGATTTGCA
TTGTGAATAACTTCGTCAGTGAATCTACCACAGAGTCTGTAGTTACTGAA
AGATCTAGTCAAATCGAACCCATATTGATTTGGAATGATTTGATCATGAA
ATTTGATTGTTGTGGTAAGAACAGCTTTATCAATATGTTTGTTATAACGT
GTTTCGTTAAGGAGATTTTCCTTCCATTTTAAATCAGATTCAAAATCTGT
TGATTCCAAAACGAAAACAGTTTGATTTTCATACAAGACTCTCCAATTAC
TTCTGcgaagaaaattgaaaagtgTTGAATAATTTGTTTCGTTGGTGACA
TTGTTATTTGTGTTGATTTGGAAGAAGATGAATAAAGAAATTGCTTGATG
GATCTGATCCAAGCATCGGAATGATTGTTGATTGTTTTGGCGCTCACCGT
CGACCATGGGCCGtcttgtatttgtttgatttgacTTGATTGGTTCGGTG
GTCGTATTTCTGAAAGATTGGCATTTATGGGTTTTTGATGAGTGAGAAAA
TCCTCCATTACAACTTCTGCAATATCCAGTAGAATCGATGAATTTAGGTG
TCAAACATTCacatttgccgttcgattgtcTATCAAATCCCATTCTGCAC
GGTAATGGTTTGCATTTATTTTCAGTGGTTGAGAATGTGTATCCAATCTG
GCAAATTTGTTGACATTGTCCTTGGACAAGACGTTGCCCTTGACCACATT
GGATGGCTCTACACAGCCCGCCTGCCATTTTGATCTCGTTCAGACCGCAT
TTGTTATCACTGATCCCACTATTTAGATTGATGACCAGGGACCATCCATC
AGGCATTGACTTACATGGTTTTCTCACTGTACCATCTAAAAGATTCTGAG
AACgacatttttcacaaaaaacatttttggtagATTTAGTTGTATATTTT
CCATTGAAGAAATACCCTAAAAAGATTTGACAAAATATTGCATCTGTGGT
GCTACATTTGTTTGGTTCACACTTCAAAATTGTATCTTCATATTGAGGAA
CTAATCCACACCAAGGGTATTTCTGCAGGACTTGATAAAAAGGTGTGTCT
GCCAATAAATATTGATCTGGATACTTGTTGCGCGAGACAGAAACCTTGCA
AGACAGTTTCATGAAATCATATCGATAAAGAAAAACATTATTACACCGTG
CGCAGTATGAGTTCTTATATAAATAACGATCATTACCATAAACTGGCTTA
TTATTTTCACCAACTACTGTAGCCTTCTCACAACCATCAACATATGTTTG
ATTGGCCCCTGGCAAGCAAGAATCAACCATGATATAGTGATTACCAGACC
AAAGGGACATATCTGGAACATATCTAAACATTGGTAAACACGATTGTCCT
TTAGTTAAACTCTTTACACTCTCGATGTAATGTTTGGCACTAGATTGAAA
TTGGTGATATTTATACCATAAGAAATCAATACAACAGTCACCCTTGGATA
TGCAAGATTCGCCACAGCTACATTCACCAGGGCGTGTCCATATTCGGCAT
TGGTAACCATACCAACCAATATCAATTCCAATATTTAATTGCTTTAAGAA
GCTGCTCAATGGAAACGGATTGTCATATCctggttttgtttttgttaaag
ATGGAAGCCTATCGCTATCATAACATTTCATCAGATAGTTTCTAAACTTC
GTAGATGAAGTGGAGTGTGGACTATGAGTGTACCCTCCACCGCCGTACTG
TCCTGAAAACGTCGAATGAGTAGTGCCGGGGGTCGTGTAAACACCCCATG
TAAATACCAGAGTCGTTGTGTTGATTAAGAAGTATAATTTAAGCAGAGTC
TTGAGTAGAGTCATCGCTTTTTCGTATCGTCTTTGTTTGTCTTCAATAGG
Attctatt
Run BLAST on NCBI

transcript from alignment at scaffold_362:994367..1001884+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062220 ID=TCONS_00062220|Name=TCONS_00062220|organism=Clytia hemisphaerica|type=transcript|length=7518bp|location=Sequence derived from alignment at scaffold_362:994367..1001884+ (Clytia hemisphaerica)
gaCATGTTAACAAAGCCATGACACGCCACCCGCTAGAGCAGAGAGGATCA
GAGCTGCGGCGACTGTGTGTTCAATTAAAAATCCTACCTTTAGTTTATTA
CACAACCTCTTGCAGCTAACTCAGGTGAGTTAACGAAGTCCAAAACCTAT
TTCTTAATTTCCCCAGCGCTTCCCATTGTTACTTAATTCTCATATATAGC
TCTCAAAAGAAGTGTATTAACGTCACGGAAAGTGCACAGGGTCAAAGATT
TAAATTAAGCTGATTTCAAGATAttggccaaaaactgattttgatgTCAT
AGAGGTAAGATTCAAaggacgtcattattgaaataGGTTATGGACTTGCC
TTAACTAACCTGAGAATGCAAATGCCTtatgaaaatcattttttttatca
CATAGGCCAATTATTGCCTTGGAGATGGGACCTGGATCAGGGATTATCAT
AACATTTCTTGCCAAGAATATTGCACCACACATTGCCTGCTTGTAAGTTT
GATACAGTATTTCatatatatttatatttatttattcagGTGTCATACAT
ACAGTACCTAattttttaagataaaaccttCCTAGAGAAAGAAAAATCGT
AAAGGGAATGGTAAATTATTAGTTCTTCATTTGTTTCAATTGAcaaacac
atatttttttcaacACTGTAAACTTATCTCATATTGACAATCCCCATCTA
ATTCCTTCAACCTCGTTTAGAGATGGAAATAATAGAGAGGTTGGAATCGC
TGATCAAAACTTTATACCCTTGTTCACCAGTTCGCAGTTAGACAGGCCTT
CCTATTGTAGATCTTTTACTAACTAGGATACCATGTATATTCCTCCTTAA
GGAATTTTACTTATTCGACAGTGCAAGTGACATTAATTCCCATGCATCAT
ATTGTACAAGAAAGACATCACTTGAAAATGGTGTTGCTGTTGAAGTGACA
ACTGATAATTTGGTAAGTACCTGAATTATTATCTATACAGTAAACCTCCA
ATTAACGAACTCTCTAAAAAAGGCtgtgattagcggacaattttaTTTCC
CTGGCCATTTCCTATTCAAATCCTTgtgaaaaagtttccaaaagatGGAC
ACTCAGGGGACTCTCCAATAAgcggacaaagtttttgcacaAAATGGCCA
AACCCCCACTTTTCCTTTCTAATTTGCGGACATTCGAGGTCTTACTGGTC
ACAGACTAGAGCTTGGGAGCACTCCCTTTATCCAGTCGTTGAATTTGCAT
ACgttataaaaatgataaattacaGGGACCTCAAGACTACTTTGATTAAT
gaaaaactaaattgttgcaCTTGAATAATCATTCTCGTGTTTTTCCATGT
CCTAGTGTCTCTAGAAAAGCACGGATCAAAATGTTACATACTTAGGNAAA
AATCGTAAAGGGAATGGTAAATTATTAGTTCTTCATTTGTTTCAATTGAc
aaacacatatttttttcaacACTGTAAACTTATCTCATATTGACAATCCC
CATCTAATTCCTTCAACCTCGTTTAGAGATGGAAATAATAGAGAGGTTGG
AATCGCTGATCAAAACTTTATACCCTTGTTCACCAGTTCGCAGTTAGACA
GGCCTTCCTATTGTAGATCTTTTACTAACTAGGATACCATGTATATTCCT
CCTTAAGGAATTTTACTTATTCGACAGTGCAAGTGACATTAATTCCCATG
CATCATATTGTACAAGAAAGACATCACTTGAAAATGGTGTTGCTGTTGAA
GTGACAACTGATAATTTGGTAAGTACCTGAATTATTATCTATACAGTAAA
CCTCCAATTAACGAACTCTCTAAAAAGGGCTGTGATTAACGGACAATTTT
ATATCCCTGGCCATTTCCTATTCAAATCCTTgtgaaaaagtttccaaaag
atGGACACTTAGGGGACTCTCCAATAAgcggacaaagtttttgcacaAAA
TGGCCAAACCCCCACTTTTCCTCTCTAATTTGCGGACATTCGAGGTCTTA
CTGGTCACAGACTAGAGCTTGGGAGCACTCCCTTTATCCAGTTGTTGAAT
TTGCATACgttataaaaatgataaattacaGGGACCTCAAGACTACTTTG
ATTCATgaaaaactaaattgttgcaCTTGAATAATTTTTCCATGTCCTAG
TGTCTCTAGAAAAGCACGGATCAAAATGTTACATACTTAACCCCTTAATA
GTACCTTATACCAAAATTAGAGCACATAATTAACaggtttctaaaaggcg
gacacttctaattagcggacactgaCCCTATTCCCCGacggtgtccgcta
attagaggttccactgtattcCATAATTTTTCCTATTTATTTCTTCTGAA
CTTGTTTTAATTCATCTCTCTTTAACCATATTATTTGGTTATGTTAGACT
TTTTTAATGTGGTTTACAAATAAAGCTGGTTTATTAAatgttgttattat
ttttgaatttccagattggaagttttcaaaaaagattgcATAACAAAGTT
GACATCTTGATTTTTAATCCACCATATGTAGTAACACCTTCAGCCGAGGT
TAGTAAacatatttttattgtttttttggttGTTTAAAAATTTGATGTAT
GCTGTTTGTTATTGTTCTCTTTTTGATTTTCTGCATATTAAAAAAGAAGT
AATGTTTGATAcaatgaaaaaagtaaaataaagaaCCTAGAAAAGGCAGA
AATCATTACAATAATTTCTATTCAATAGGTAGGAACTTATGATTTATCAG
CATCTTGGGCTGGTGGAGTCAATGGAAGAGAGGTGAGTAATGTCttcttt
atttaaaagaaataccttAACTCATTTAAAAAAGGTAAATGCCTCCCCTT
GAATCCTCTCTTTTACAGTCAGAAAATCTCAATATAAATTTATATTCTCa
acatatatttttatttaaattacaaaatgaattttcccaaaaaccaAAGC
AACAGTGATAGATCTTGCACCATCTTTCTGAAGGTGTTTCTCTCGAATTG
AATGTATCCTTCTAGGTGGTGGATAATTCTCAATTTTTAGCTCGTAGCTT
TGATTCCCGTATTCTTCTAGGTGGTGGATAATTCTCAATTTTTAGCTCGT
AGCTTTGATTCCCTTTGGACAACTTTaaccattttattttatagGTGATT
GATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCCAAAAATGGTTTTCT
ATATTTGTTANTGATAAGTTCCTCCCATTGGTTCCGGAGTTGTTATCTAA
AAATGGTTCTCTATATTTGTTAGTACTGGAGCAAAACAAACCAGGTATAA
TATGATAATTGCTCTGAACTCTGAACTCAATTTCTTTTAAAGTGAcataa
aatcacaaaatatttgaaaggtTTCATAGTAACAAATCCTATTTCTATTA
GAATCAGAAATTTATCCAATTAAATGTTtcgtaggctgctggcatccact
aacggattcgtgctccttatactacctgggggttttgtagaggtctgcga
ttcagactacttGTTTCGCAACATTAACAACATTCgttatttttgaaaag
agcTCAGAGctctaaaaaaaaatcaaactcaagATTTCAAAAACCACACG
CCGACAGAAAAATTCTGTGCAGTAATGTTGATTTTCACACGCGtgtgatt
tattgattttttcctgtgattttaataaatgcattttttttttaccttag
aCGAAATTGTTGAGATGATGCAGAGTAAATACAATCTACATGCAAGTCTT
ATAATGAAACGAAAGGCTGGACCAGAGTATTTAAAAGTATTTCGTTTTGA
ATTCATAACATGATTATAGACTTTTGATTACTGACGTTGTTGGACAAGAA
GGAGAGATTGAGAAGTTATCAATTGggaaagaaactttttcaattcATCC
CTTGGTGGCAAAAACATTCAAGTTAGGTTTCATAGCGTACCCAATTCCGC
CATTTCGAcaatttttcctgatttttctgtgatttttgtCTTATCATATA
AACAAGAATAGAAATCTAGCACCGACTATTTCctttaaattcaagatttt
tgtaaaaatgtctaGAAATAGACTTTCTTTAAACAGACTTAAACAACCCG
ATTTTCCATCTTTGACAAAGTTATCAtgaagcaaagttcagccaaaaatC
GACTCTCTAGTAATAAATGAGAGAATTTATCTTGATATGTAAATTAAGTG
CTTTAACACTATATatagaaaaagttaaaattttacaatataTCATTGAT
AGAATAAGATTATGAAACAAATTATAACAAGTATTTACAATATTGCGGTA
AAAGAACGAAATCGTAAAATCTTGATCACCCAAATGTGTCATCAGCGAAC
TTAAGTCCCgcgaaatcttgaaattttgcagatgCCGTGAATCGTAAACC
CATTAAAATAGTTTATAGTTTCCAAGTTTTCATTTCTCTGTGATTGACGT
TGATTTAGTTTTACTCAACTCAATTTGAGTCTTCTTCCTGTTCTTCCCAT
AAAGCTGCTGTTTAAATTCAGTTTTTGTGTTCTTGTTCATCGCGTAGAAT
GCGAAAATAAACACACCTCGAAAAGATCGTAAAACGTCATAAACCAATCC
AAAAACTGCATTGAGAATACTCTCATTTTCTGTCAAGTTAGATCGTTTGA
TTTGAACTAAACCCAATAATTCTGTTATTCCCAAAATGAGCATTAGTTTA
ATTCCAACTTTTAGTAATCCAACGTCTTTATGTTGTCCTTTTCCAAGAGT
TTTTTGAGATTCTCTACTCTTCTTTCTAATGGAAATCAAAAGCATACAAA
GACACAACAAACATGTAAAATACTCAATAGAAGctggaataaaataaaat
gccaAAGACCAATACCAATTTCCGAACCAACAATATTTAGAATCTAACTC
AAATACAATAGAATCAGATTCCTTTAAGATGAGCAGAGTTCCACAAATGA
TCGTCGAGATCGCAATAGTTGCAAGCAGTCTCTTTTGAAGCATCTTCACC
GATTCCTTTCGATCAGATCTTGACAGAGATCTCTTGGTAAACTGCAACAT
CATATCAATGGCAACCATTCCActccaaatcaaaacattgaccaaAGACC
AATACAAAACCACAAAAATCCCTGTACAAGACAAAGAGCCTTTCCTTAAA
TGAAAATTAGCAAGGAACATTGAATCACTGAATAGCAAAAAGGCAACAAG
AACAGTAATATATAAACCACCAGTGTTTCTCAAGCTTTTTATTGCAGCCA
AGGTAACGAGGAACATGAGGTATGAAAACAAGCTGAAACATGTTCCAATA
ACCGagacatgatattttgcatttttaacagttttggACCAATCAAATTC
CTGTTGAGTCATTCCACTGCGAATAGCTTCGATGCATATTTGAAAACCTT
CTGCAAGTGGAAAATATTCATCAATGGGATAGACTTTTTGTTTTGCAGAT
TTTGGAGATTCCCCTTCAATCAGTAAAGATCCATTTGGAGATATTTGATA
GATTGATGGGTATATTGTTTGTCTTGAACACGTTGAGTGCAAATGAAATG
CCTCACAGTAGATTTTCTCTTCAAAGACGATCCCATCCTGTATTGTGAAT
ATTAGTTTTGAATCCAGATTATAATCAACTGTTTTTGTCATGTTACAAGT
TCGATTTGCATTGTGAATAACTTCGTCAGTGAATCTACCACAGAGTCTGT
AGTTACTGAAAGATCTAGTCAAATCGAACCCATATTGATTTGGAATGATT
TGATCATGAAATTTGATTGTTGTGGTAAGAACAGCTTTATCAATATGTTT
GTTATAACGTGTTTCGTTAAGGAGATTTTCCTTCCATTTTAAATCAGATT
CAAAATCTGTTGATTCCAAAACGAAAACAGTTTGATTTTCATACAAGACT
CTCCAATTACTTCTGcgaagaaaattgaaaagtgTTGAATAATTTGTTTC
GTTGGTGACATTGTTATTTGTGTTGATTTGGAAGAAGATGAATAAAGAAA
TTGCTTGATGGATCTGATCCAAGCATCGGAATGATTGTTGATTGTTTTGG
CGCTCACCGTCGACCATGGGCCGtcttgtatttgtttgatttgacTTGAT
TGGTTCGGTGGTCGTATTTCTGAAAGATTGGCATTTATGGGTTTTTGATG
AGTGAGAAAATCCTCCATTACAACTTCTGCAATATCCAGTAGAATCGATG
AATTTAGGTGTCAAACATTCacatttgccgttcgattgtcTATCAAATCC
CATTCTGCACGGTAATGGTTTGCATTTATTTTCAGTGGTTGAGAATGTGT
ATCCAATCTGGCAAATTTGTTGACATTGTCCTTGGACAAGACGTTGCCCT
TGACCACATTGGATGGCTCTACACAGCCCGCCTGCCATTTTGATCTCGTT
CAGACCGCATTTGTTATCACTGATCCCACTATTTAGATTGATGACCAGGG
ACCATCCATCAGGCATTGACTTACATGGTTTTCTCACTGTACCATCTAAA
AGATTCTGAGAACgacatttttcacaaaaaacatttttggtagATTTAGT
TGTATATTTTCCATTGAAGAAATACCCTAAAAAGATTTGACAAAATATTG
CATCTGTGGTGCTACATTTGTTTGGTTCACACTTCAAAATTGTATCTTCA
TATTGAGGAACTAATCCACACCAAGGGTATTTCTGCAGGACTTGATAAAA
AGGTGTGTCTGCCAATAAATATTGATCTGGATACTTGTTGCGCGAGACAG
AAACCTTGCAAGACAGTTTCATGAAATCATATCGATAAAGAAAAACATTA
TTACACCGTGCGCAGTATGAGTTCTTATATAAATAACGATCATTACCATA
AACTGGCTTATTATTTTCACCAACTACTGTAGCCTTCTCACAACCATCAA
CATATGTTTGATTGGCCCCTGGCAAGCAAGAATCAACCATGATATAGTGA
TTACCAGACCAAAGGGACATATCTGGAACATATCTAAACATTGGTAAACA
CGATTGTCCTTTAGTTAAACTCTTTACACTCTCGATGTAATGTTTGGCAC
TAGATTGAAATTGGTGATATTTATACCATAAGAAATCAATACAACAGTCA
CCCTTGGATATGCAAGATTCGCCACAGCTACATTCACCAGGGCGTGTCCA
TATTCGGCATTGGTAACCATACCAACCAATATCAATTCCAATATTTAATT
GCTTTAAGAAGCTGCTCAATGGAAACGGATTGTCATATCctggttttgtt
tttgttaaagATGGAAGCCTATCGCTATCATAACATTTCATCAGATAGTT
TCTAAACTTCGTAGATGAAGTGGAGTGTGGACTATGAGTGTACCCTCCAC
CGCCGTACTGTCCTGAAAACGTCGAATGAGTAGTGCCGGGGGTCGTGTAA
ACACCCCATGTAAATACCAGAGTCGTTGTGTTGATTAAGAAGTATAATTT
AAGCAGAGTCTTGAGTAGAGTCATCGCTTTTTCGTATCGTCTTTGTTTGT
CTTCAATAGGAttctatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039003XLOC_039003Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062220-exon-scaffold_362-1491911889:994367..994490TCONS_00062220-exon-scaffold_362-1491911889:994367..994490Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1510915933:994367..994490TCONS_00062220-exon-scaffold_362-1510915933:994367..994490Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1575043694:994367..994490TCONS_00062220-exon-scaffold_362-1575043694:994367..994490Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1491911889:994772..994858TCONS_00062220-exon-scaffold_362-1491911889:994772..994858Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1510915933:994772..994858TCONS_00062220-exon-scaffold_362-1510915933:994772..994858Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1575043694:994772..994858TCONS_00062220-exon-scaffold_362-1575043694:994772..994858Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1491911889:995238..995328TCONS_00062220-exon-scaffold_362-1491911889:995238..995328Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1510915933:995238..995328TCONS_00062220-exon-scaffold_362-1510915933:995238..995328Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1575043694:995238..995328TCONS_00062220-exon-scaffold_362-1575043694:995238..995328Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1491911889:996831..996914TCONS_00062220-exon-scaffold_362-1491911889:996831..996914Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1510915933:996831..996914TCONS_00062220-exon-scaffold_362-1510915933:996831..996914Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1575043694:996831..996914TCONS_00062220-exon-scaffold_362-1575043694:996831..996914Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1491911889:997095..997148TCONS_00062220-exon-scaffold_362-1491911889:997095..997148Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1510915933:997095..997148TCONS_00062220-exon-scaffold_362-1510915933:997095..997148Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1575043694:997095..997148TCONS_00062220-exon-scaffold_362-1575043694:997095..997148Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1491911889:997511..997660TCONS_00062220-exon-scaffold_362-1491911889:997511..997660Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1510915933:997511..997660TCONS_00062220-exon-scaffold_362-1510915933:997511..997660Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1575043694:997511..997660TCONS_00062220-exon-scaffold_362-1575043694:997511..997660Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1491911889:998067..1001884TCONS_00062220-exon-scaffold_362-1491911889:998067..1001884Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1510915933:998067..1001884TCONS_00062220-exon-scaffold_362-1510915933:998067..1001884Clytia hemisphaericaexon
TCONS_00062220-exon-scaffold_362-1575043694:998067..1001884TCONS_00062220-exon-scaffold_362-1575043694:998067..1001884Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:994367..1001884 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	2.77915e-08	0.037506	0.114154	0	0	0	0	0	0	0	0.123527	0	0.0964918	0.121721	0	0.000379189	0.000139936	0	0	1.59499	2.22924	0	0	0	0.347129	0.152359	0	0	0.182651
Blast
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BLAST of TCONS_00062220 vs. Swiss-Prot (Human)
Match: HEMK2 (HemK methyltransferase family member 2 OS=Homo sapiens GN=N6AMT1 PE=1 SV=4)

HSP 1 Score: 135.576 bits (340), Expect = 9.437e-35
Identity = 63/131 (48.09%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  132 IALEMGPGSGIIITFLAKNIAPHIACFASDINSHASYCTRKTSLENGVAVEVTTDNLIGSFQKRLHNKVDILIFNPPYVVTPSAEVGTYDLSASWAGGVNGREVIDKFLPLVPELLSKNGFLYLLXISSSH 524
            I LE+G GSG++  FLA  I P      +DIN  A+ CT +T+  N V ++    +L+     RL  KVD+L+FNPPYVVTP  EVG++ + A+WAGG NGREV+D+F PLVP+LLS  G  YL+ I  ++
Sbjct:   48 ICLEVGSGSGVVSAFLASMIGPQALYMCTDINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENN 178
The following BLAST results are available for this feature:
BLAST of TCONS_00062220 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEMK29.437e-3548.09HemK methyltransferase family member 2 OS=Homo sap... [more]
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