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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062359 ID=TCONS_00062359|Name=TCONS_00062359|organism=Clytia hemisphaerica|type=transcript|length=952bp
ttttgtttttggtaACAACAACAGattttattaaaaggcACTAAATAAGA
ATTAAACATGGCAGCTGAATCGGAAGAAATACCTGGTTTCGAATTTGAGG
CGTATAACCCATTTGCAATTCGAAGTAATTCTGCCTTAGTAGAATATTGT
CGTGCATTTTTAGCATTTGTTTCTGGATCAGCGGCTGGCATTCTTGGATT
AACTGGATTGAatggttttttcttttatatgaTTGCGTCAATCTTTATGT
CTGTATTGTTAGGACTGAAAACTCAGTCACAATGGGATCGATATTTCTTA
TCTAAATGGCATGTGTGGACAAATGGTATTTTTGGTGAACTGTTTACTTA
TCTTTTAGTATGGACATTTATGTATGGTATTATTCATGTGTTTTGATTGG
ACGATATACAATTTTATCGAATTTATAGTTAAtacctttgaaaattgaat
cattCATATAACTTTTGGCTACATCATTTAAAACATTCTTAGATTGGTTG
GTACGAAAATCAGAATGAaagtgagagaaaaaattagttGCTTTTTTTAA
TTGCATGCATTTTTGTCGTTGCAGTGTGCAATATAAAACTAGTAACACTG
GAGCTGAATTATCATGAGATATGTGATAAgatttataatttttcaaaata
tttagaattttaagtttttgtaaattattttattatattttactACAACT
TATTAGATGATCATGGGATAATAGACTCCAGTTGTAGTTGATCCATATTT
AGTATTTGGAAAATACCTTTAGAAAAAGTTCTCATTTTCCCCCTGACATT
AGGAAAAATCCCCTTGCCCCCTTGACTTCTGCCTTTTTTTGTTATTCTCC
AAATCATAATTGTTTTTGGAATGGCTTAAGCCTATTACTCTCTGTGTATA
AAATCATGGCTTAGTAAGCCAGAGTAAGCTTATCATTTAGGCGCACTCGT
GA Run BLAST on NCBI protein sequence of TCONS_00062359-protein >TCONS_00062359-protein ID=TCONS_00062359-protein|Name=TCONS_00062359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=112bp
MAAESEEIPGFEFEAYNPFAIRSNSALVEYCRAFLAFVSGSAAGILGLTG
LNGFFFYMIASIFMSVLLGLKTQSQWDRYFLSKWHVWTNGIFGELFTYLL
VWTFMYGIIHVF Run BLAST on NCBI transcript from alignment at scaffold_363:173404..183528- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062359 ID=TCONS_00062359|Name=TCONS_00062359|organism=Clytia hemisphaerica|type=transcript|length=10125bp|location=Sequence derived from alignment at scaffold_363:173404..183528- (Clytia hemisphaerica)
TTTTGTTTTTGGTAACAACAACAGGTTAATTTTACTTCTCAGTACTGAAA
AAGAAGAAGATGATGACACTTGTTCAGACGATCTCAATCGAACGAAATCA
ACGATCGAACCAGTCAAACCAAATCGAATGCAATCAACATATTGAAATTC
GATTGTTGAACGCAATCGAATATCAATCGAACGTCAAAATTCTGGGTAAT
ATTCGACTGGTGGTTCGAACGACCCACGGCATGGCCCGAACATGTTCGGG
CCTCTTGATTAATACTTTTTTAAAAATGGCCCGCGCGTGGCCCGCGCGGG
CCCGCGCAGTTTCGGACCATGTTCGGGCCAGATTTTCGAAAACTTGCTAC
GATCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATATAAAAGTTAAT
CATCTATTTTCCAATTAAGTTAGGAAAATTATTAAAAAGAATGATTTGAA
TCTTACATAATATGGTCTTCTTTATATTCTTTATCCCGTTCCCTTTTCTC
GTGGTCTTTGTATATGTATCCCGTTTATATTATCCGATAGTTAACCCGAT
TTGTATTTTATCTTAGTATGTTAGGTCAGAGAATAACATTCAGTTTTATC
AACGAATATACAGTCTTCTCCTATTCGAAGCAGAATTTTTGTCTAATGAA
AATATTTAACAATGGATGATGATAAACCAGGAAAGGTAAATAAAATTAAC
ATGGCCCGAGCAAATCCGTATCAATTGTAAATACATGGCTCGAACATGGT
CCGAACAAAAATACTTTTTTGTGGCCCGAGCATGGTCCGAACAGGCCCGA
ACATGTTCGGGCCATGCCGTGGGTCGTTGGTTCGATCGTCGATTCCGTTC
TCTCGATCGATTGAGATCGTCTGGCTTTATTCTTGCAGCTTCCCAACATC
TAAGCTCTCAAACATCACAAGCCGAATGAAATTACTTTCGATTTCCCGTA
GAAATTATGCGATGAACAATCCGGGGTCAATGAATCGGCGATCAAAAGCA
ATCGAATGCAATCGAATCTCAATTGAATCTGAAAATTGCGTTCGATAATC
GAATTACAATCCGTCAATTGCGTTCAATTTGGTTCGACTGGTTCGATCGT
CGATTCCGTTNGTTATATTCGATTAAGATTTGATTGCGTTCGATAATCGA
ATTACAATCCGTCAATTGTGTTCAATTTGGTTTGACTGGTTCGATCGTCG
ATTCCGTTAGATTGAGATCGTCTGGACTTGTTAAGGCGATCATCGAAAAA
TTGTTCTATTCGCGTCACCCGCCCGTATCAAATTTTCCTCTGATTTTCCG
GTGCGGAGATGCAGAAAAAAAAGTGGGAAAAGCAATTTGTTCTTTTAAAG
TATAGCTTTTTTCTCAATTGCTCTGACGACCATCGAAAAATTGTTTTGCT
AGCGTTACCACCCGCCCCTGAGTTACTGGCGTGATTAAAGAAAAACCAGG
AATGTTTTTGACCGCCCGTCCGCCCGCATGCATTTTTAACACCCGTTGTG
ACGCGAACAGAGCTTTTTTTCGATGACCGCCTAAGGGGTCTTCGACAAAA
AACTTTTGAAGTTTTTATCGGCATTGGGCCGATAAGCTTCAGACCCCCTC
CCCCCCTTACTCTTATTGGCCAAAATTTTTCAAATCCAACTTTCACATCT
TCGAAAACACAATTTCCTCCAATCTTGTCCGTCATCGCCTTCCCACCCGT
CATCGTTGAATTTTTGTCTATTTGTGCACCAACATTGAGTTTGTTCATTA
CCCGCATTGATATTGTTAATCAAAACAAAAGNCTGGGCCATGACCCTAGA
CAGTTCTAGTTCACAAATTTTATAAGAACTGGAAGTGCGTGGTGAGTCTT
AGGGGCCATCGTACATACCCGCATTGATATTGTTAATCAAAACGAAAGTT
AAAATGACAGGATGAAGTCGCAACATTTCGAAGGAAAAGGCAGCGCTGGC
CAATGAAAAAAGAGTTTTTTATCAAAGATAGTTCAAAACTGTACTTTTAA
AGCTGCGAATTTGCGCGCAAAGGTGAAAGCAAGTGAAATCATATGCTTTC
AGTGGAGTTTGTGGACGAAATCAGAAAGAAAGAAATTGGCTGAAAGGATT
TTCGTCTCAATACTTGTTTTTTTATCAGTATGTAGTTGGACCCCCCCCCC
ACCCCCTTATCGGCCCAATGCCGATAAAAAATTTGAAAGTTTTTTGTCGA
AGAAGGAAGGAAAAGGCAGCGCTGGCCAATGAAAAAAGAGTTTTTTATCA
AAGATAGTTCAAAACTGTACTTTTAAAGCTGCGAATTTGCGCGCAAAGGT
GAAAGCAAGTGAAATCATATGCTTTCAGTGGAGTTTGTGGACGAAATCAG
AATGAAATTGGCTGAAAGGATTTTCGTCTCAATACTTGTTTTTTTATCAG
TATGTAGTTGGACCCCCCCACCCCCTTATCGGCCCAATGCCGATAAAAAA
TTCGAAAGTTTTTTGTCGAAGATCCCTAAAGAAGGGGGTGCACAGGTGTT
TGCCGCAAGCAAAAGTTGGTAATGCAAAGTCTCACAAAATTGCATTTAGC
AAACGCAAAAAAAACTCCATAATGGCGGCATCATGCGAGAGAGCAATTAG
AATACAAAATAAACTAATTTCAAAGGCTCATTGTAAGTGATTGAGTAAAG
CTATCATCAAAAAATAAAAATAAAACAAATCTTTAACCTTTCAATAATCC
AAATAAACAAAATATTTCAAATAAATTGATGTTTAAGTTTGAAAACAAGC
ACCATTTCCACCATACACTTTTAGAGCAAAAAGCAGCATTTCGCTGAAAT
CTGCTGCTCTTCCCGGGCAAATANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTAAACGCGTTTACGGCAATGTTTATTCTTT
ACACTTTCGTTTTCAAAATCTGTTGAACATGGATTTTGGCTTGTGACGAT
TACCTCGCGTAACATCTGTGGGTGCCCAGTGCACGAACGGCAAACTTATT
TTTCTCTTTTCTCACTTATATACTTTTGGTTTTTACATAAATCCTTTTCG
ACCATCTCGTAACAAGCTTGAAGTCCTTCTTTCAGTTAGTCACACTATCC
AGCTTTCAGAAAAAACAATATCAGTCATCTACAGGATGTATTTGAACAAC
AAGAATGAGAGTTACCTGAATCAAGTTTGCAAGACAATTAAAATAAAACT
TGAAAGTTTGAAACAAAATAAAACGTGCAGCAGCCAAAATCAACCAACCA
AAATTTGGCCGTTCGCAAAAAATACCTTGGTTCCCGACATTCCAACCATC
AAAAAGTGGGTCGGTCTGGTGGGCGAAAGATATTTTCTGTTTGAACGAAA
CAGTTCAAGAGGGCGGAATTTTCCTTAGAAAAGGGTGATAAACGAACGTT
TGATCGCCCTAGAAGCCTCTTTTTCACTTCACAAAAGCTCCGCTGGTTTG
TTTTGATGCTTCCATATGGTCCGCAATGAAAAATCGGACTTGGAAATTGG
GAAAAAACAGAACTAACAGGTTTCGAATTGTTCTTTTGGGCGAGATTAGC
GTTTGCTCTTTCTCTCAAAAGAGAAAACATAGAGGGTGATGGTGGAGTTT
CAGCTGTCAGGAAAAATGGTTTCCGACTCTAATTTTTCAGTAGAAATCAC
GGTCGGTCAGGTGACGGGGAGCAAACAATTTTTTACGAACAGCCTTTGTC
ATTCAATTCCCGAGACAGCTTGTTTATATGGTAAAGAAAAAACAATTCCG
CACATGTAAATGGGTCAGTGTTTGATGTCCGGCAAAATTTCCGGTCAATA
GCCTATCCGGCAGTGCGCAGATCTAGGTGGGTTCCGTCTCCCCGTAGATC
TTTTTTCTTGGGAAGTTGATCTTCAAATTAGTTTTCAAGGTTGGCTTGGC
TCAAATTTTTTCATCTATGGCTCAACTTTTAGGCAATTTCTCAATGTTTT
TGAAAATGTTAATTTCATTAAAAAGTGCCGGGTTATTTTTTCATGAATCC
CTTTAGAAGTTTTGCGGCGCTCTTTTTTGCTTGAGAGTCAGATAAACAAT
ATAGCGCTTTCGCAGCATTAATCTTTGATATGCATTTTGGCGGGACGCTA
GTGTGACTAACTGTCTTTCAGTTTGTTTTCACTTTATTTGAAGGCTTCTT
CTTGGAATAATAATTCGTTAAAAAGCGAGCGCTATTCGGACCCAGTCCGC
GAACGAGGAACCAGTGCGCGAACGATCTTTTGAAAGAAAAAATTAGAGCT
TCGCTCGCAGGTAATACTTTAACTCTCTTCCGAGATGATACAGGGGTATT
GAACTTTTCAAAACCACGCGTTTTTTCACTAAAAAAACGTCTTTTCGTCT
TTTTTATAAGAGCTTTAGCGTTTTACTAACCTGTTATTTTTGTAAATATT
TTCCTGTCGTTCATTTTTTTGTTTTCTTTTTCAAGTTTTGCTCATCGAAA
AGCATACAGTAGTGTAGTGTCTTCTTTTTTAATTGAGATCGCCAGTGCTG
TTGAATGTTTTGACGTTGCAATGTCTTCATTTTGAATATGGTGAAGTTCG
GATCGTTCGCGGACTGGAACCTTTTTTATATCAACTACTGGTGATATTTT
TCTTTTCTTTTTTAAAGTTTGTTTTTGTTTTGTTTTGAAAGTGGCAGTCT
ATGGAGAGTCTTCATTTGATAAAAACGTGGGAATTTTTTATGTCTACCCG
AAGATTCAATATACCGGTTTCCTTTGTTATTTCAATCCGGAGCTAGAAAC
TTTGCATTGGAATTGTCAAGTTAAAGACCGCGGGCATGCCCCTTGAATGT
TTTGATCGCAATGTAAAGTCTTCTTTTTTTTCTCAGCATCTGGAATGTTT
TGATCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTTGGACAAGTATTTTTTGGAGTGGCAGTT
CAAGCATTTTTTCTTACAAAGCTTTTTTGTCCACAGGTAGCCATTTTTTA
TTTTTTTCGAAAAATCCAGCTTTTTCGTGTGCTTCCGTGCAAAGTTGGAT
CTTTCAGATTCTACTCGTTTTTGTATGACTTTTCTGGGTTCAAAGACGTT
CGGTTGCCAACTAGACCCGTCGCCAACTGGGCAGGGGACTCTATATGGCA
ACCATCAATAATATATGAGGACCTTTCCGATGCTCCGGAAACGTCCGCAG
CAAAATTTGCTGTTTTTTCGTGCTCTGGAACACCGCAAGATATCTTAGAT
ATAATTACAATAGCGCTCGCTGTGCTGATCATGTGAAATAAAACTAACTG
CGCATGCGCATATTTTTTAAAAATCAGCCGACTCATGGTACAGTAGTGAA
ACCTCATGTTAACATGTTAAAAATCACTTGCTCTGGAAGCACCGGAAGAG
CTCTGGAACTTTCCGGTGAGAAAAATAGTGTTTTTTTAGCTGAGCACCGG
AAGGGTCCTAATATATGTTCTTTTTGTGCAGCCCAACCGACACTCACCTT
TAAAACATAAATCTCGAGTCGGCCCAGCCGCAATAATCAGTGAAGCTGAT
ACTTCGATATTCCAAGATTAGAAAAAGCTATATATACCTGTTAATTTTTT
TTCTTTAAAGAATCAACAAGCCATCAACATCAATAAATTCCACACATTTC
CTCATCAGAAACTTTTAAAATTATCTGCCATTATGACTTTCTGAAGCCAT
TCCGAAATTAACCAATCGAGTTATGTATTGGAATTCCTATGGTAGTTCTT
TTCCGATATATGTAAAATAGCTGCACAGGGGTTTGAGGAAAAAACAGAAC
TACCATCATTTGTTTTTTTTTCAGCCATATATTTAAATTTATGCTATCAC
ATGCTTGAAATAAATAAGTAAATAATATTAAATATACTATCTGTATATTT
CAGANTTTTGGACAAGTATTTTTTGGAGTGGCAGTTCAAGCATTTTTTCT
TACAAAGCTTTTTTGTCCACAGGTAGCCATTTTTTATTTTTTTCGAAAAA
TCCAGCTTTTTCGTGTGCTTCCGTGCAAAGTTGGATCTTTCAGATTCTAC
TCGTTTTTGTATGACTTTTCTGGGTTCAAAGACGTTCGGTTGCCAACTAG
ACCCGTCGCCAACTGGGCAGGGGACTCTATATGGCAACCATCAATAATAT
ATGAGGACCTTTCCGATGCTCCGGAAACGTCCGCAGCAAAATTTGCTGTT
TTTTCGTGCTCTGGAACACCGCAAGATATCTTAGATATAATTACAATAGC
GCTCGCTGTGCTGATCATGTGAAATAAAACTAACTGCGCATGCGCATATT
TTTTAAAAATCAGCCGACTCATGGTACAGTAGTGAAACCTCATGTTAACA
TGTTAAAAATCACTTGCTCTGGAAGCACCGGAAGAGCTCTGGAACTTTCC
GGTGAGAAAAATAGTGTTTTTTTAGCTGAGCACCGGAAGGGTCCTAATAT
ATGTTCTTTTTGTGCAGCCCAACCGACACTCACCTTTAAAACATAAATCT
CGAGTCGGCCCAGCCGCAATAATCAGTGAAGCTGATACTTCGATATTCCA
AGATTAGAAAAAGCTATATATACCTGTTAATTTTTTTTCTTTAAAGAATC
AACAAGCCATCAACATCAATAAATTCCACACATTTCCTCATCAGAAACTT
TTAAAATTATCTGCCATTATGACTTTCTGAAGCCATTCCGAAATTAACCA
ATCGAGTTATGTATTGGAATTCCTATGGTAGTTCTTTTCCGATATATGTA
AAATAGCTGCACAGGGGTTTGAGGAAAAAACAGAACTACCATCATTTGTT
TTTTTTTCAGCCATATATTTAAATTTATGCTATCACATGCTTGAAATAAA
TAAGTAAATAATATTAAATATACTATCTGTATATTTCAGAAAATAAACAC
TATCAATTTGAAATAGTTTATCATTGTAACACCCGCCGTATTTGGATCAT
TCTATTGTGGGCGCAAAATAAGGTGGAACTAAGTCGGGCTTCCTTGGTCT
TTTTAAACATTAGTTCTGATAGAATAAAAATATAACCTGATCAACACAAC
CAAACCTTCTGTCTTGCGTTTACTCTTTCTTTCCCAACAACTTTTGTTTT
TGCTTATGTAGGTTTTAAAATCCACAAGTAATGAACCTCTTATAGTTTTA
TCTGAATAAATCTTCTTGAAAACCTTCTGTCAGGTTTCATTCCGTATGTT
TTTTATTCACATGGTGAACCAATTTCCTCGATTTCCTGATAATTGAAAAT
TGGAACTTTCCNGTTCACATGGTGAACCAATTTCCCCGATTTCCTGATAA
TTGAAAATTGGAACTTTCCCGTGGGCACGATTGGGCATACTGCCATTGCA
AAATATTTTTCATGAAAATTTACGCTAATATAATCTTACATAGAATACAT
CTCTTAAATTTGACTCTTTTGCTCGTATTTCTAAATTTATCGATGAAAAG
AACTATCTATAAATTATTTGCTTAAACAGGCGTTGAATCGATATTGACAT
ATTTAATGATGTCATAATCAATGCCGTGCATATTTTGTCAAATATCACTA
AAATATACAAGATAAGTAAACATATAAATTTATTGCCTGCGAGCACGGCT
TAGCGAAGCGCACCTCTCTTATTCATTATCTAAGAATTGAAGCAGGCAAA
GATTACTGTGCAGGCTGATGGCGGACAAAGGTTATTTGAAGATATATTCA
GTTATAATCCAAGGTAGAACAAACTAAACATGGAAAGGGGGTATTTTTCA
GTGCTCTATGCGATGATCGGAATTTTTTTTGAATTCTATGTTTAGATTTT
TCTACCCAGCCCCGTTGCTATGTACGCGTGTCCTGTTGCTAAGACCTTTG
CTTGAAATCGAAAGCAAAACCAAAATAATTTAATCGATAAAGTGAAAGGA
CTGACTGTAAGTATTCCCATGTTTCTTTATGGCTGGGGATTTGAATTCCA
TTGTTTTCGAGCCAGAAAATCCAGTAGGGACTGGTAGGGATGGAAAAAGA
GCACATATGACATTTAGAGGCTCCATCGGGGGTTTGTAAGGTACAAGGAC
GAATTAATTTATGGTGCTTAATGGAGGGGGATGCTTATGGAGGAAATATT
TGAGAGTCATTCACACAGATTCACATACTTTTGGGTTGTATTTCCATTGC
TGTAATTTTTTTTTACTAAAATAACAACGCCCTTCTTTGTTCTTTAGATT
TTATTAAAAGGCACTAAATAAGAATTAAACATGGCAGCTGAATCGGAAGA
AATACCTGGTTTCGAATTTGAGGCGTATAACCCATTTGCAATTCGAAGTA
ATTCTGCCTTAGTAGAATATTGTCGTGCATTTTTAGCATTTGTTTCTGGA
TCAGCGGCTGGCATTCTTGGATTAACTGGATTGAATGGTTTTTTCTTTTA
TATGATTGCGTCAATCTTTATGTCTGTATTGTTAGGACTGAAAACTCAGT
CACAATGGGATCGATATTTCTTATCTAAATGGCATGTGTGGACAAATGGT
ATTTTTGGTGAACTGTTTACTTATCTTTTAGTATGGACATTTATGTATGG
TATTATTCATGTGTTTTGATTGGACGATATACAATTTTATCGAATTTATA
GTTAATACCTTTGAAAATTGAATCATTCATATAACTTTTGGCTACATCAT
TTAAAACATTCTTAGATTGGTTGGTACGAAAATCAGAATGAAAGTGAGAG
AAAAAATTAGTTGCTTTTTTTAATTGCATGCATTTTTGTCGTTGCAGTGT
GCAATATAAAACTAGTAACACTGGAGCTGAATTATCATGAGATATGTGAT
AAGATTTATAATTTTTCAAAATATTTAGAATTTTAAGTTTTTGTAAATTA
TTTTATTATATTTTACTACAACTTATTAGATGATCATGGGATAATAGACT
CCAGTTGTAGTTGATCCATATTTAGTATTTGGAAAATACCTTTAGAAAAA
GTTCTCATTTTCCCCCTGACATTAGGAAAAATCCCCTTGCCCCCTTGACT
TCTGCCTTTTTTTGTTATTCTCCAAATCATAATTGTTTTTGGAATGGCTT
AAGCCTATTACTCTCTGTGTATAAAATCATGGCTTAGTAAGCCAGAGTAA
GCTTATCATTTAGGCGCACTCGTGA Coding sequence (CDS) from alignment at scaffold_363:173404..183528- >TCONS_00062359 ID=TCONS_00062359|Name=TCONS_00062359|organism=Clytia hemisphaerica|type=CDS|length=339bp|location=Sequence derived from alignment at scaffold_363:173404..183528- (Clytia hemisphaerica)
ATGGCAGCTGAATCGGAAGAAATACCTGGTTTCGAATTTGAGGCGTATAA
CCCATTTGCAATTCGAAGTAATTCTGCCTTAGTAGAATATTGTCGTGCAT
TTTTAGCATTTGTTTCTGGATCAGCGGCTGGCATTCTTGGATTAACTGGA
TTGAATGGTTTTTTCTTTTATATGATTGCGTCAATCTTTATGTCTGTATT
GTTAGGACTGAAAACTCAGTCACAATGGGATCGATATTTCTTATCTAAAT
GGCATGTGTGGACAAATGGTATTTTTGGTGAACTGTTTACTTATCTTTTA
GTATGGACATTTATGTATGGTATTATTCATGTGTTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062359-exon-scaffold_363-1575043694:183505..183528 | TCONS_00062359-exon-scaffold_363-1575043694:183505..183528 | Clytia hemisphaerica | exon |
| TCONS_00062359-exon-scaffold_363-1575043694:173404..174331 | TCONS_00062359-exon-scaffold_363-1575043694:173404..174331 | Clytia hemisphaerica | exon |
| TCONS_00062359-exon-scaffold_363-1510915933:183505..183528 | TCONS_00062359-exon-scaffold_363-1510915933:183505..183528 | Clytia hemisphaerica | exon |
| TCONS_00062359-exon-scaffold_363-1510915933:173404..174331 | TCONS_00062359-exon-scaffold_363-1510915933:173404..174331 | Clytia hemisphaerica | exon |
| TCONS_00062359-exon-scaffold_363-1491911889:183505..183528 | TCONS_00062359-exon-scaffold_363-1491911889:183505..183528 | Clytia hemisphaerica | exon |
| TCONS_00062359-exon-scaffold_363-1491911889:173404..174331 | TCONS_00062359-exon-scaffold_363-1491911889:173404..174331 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_363 | supercontig | scaffold_363:173404..183528 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR029008 | Rab5IP_fam |
Blast
BLAST of TCONS_00062359 vs. Swiss-Prot (Human)
Match: EMC6 (ER membrane protein complex subunit 6 OS=Homo sapiens GN=EMC6 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 7.970e-24 Identity = 56/114 (49.12%), Postives = 82/114 (71.93%), Query Frame = 1
Query: 58 MAA--ESEEIPGFEFEAYNPFAIRSNSALVEYCRAFLAFVSGSAAGILGLTGLNGFFFYMIASIFMSVLLGLKTQSQWDRYFLSKWHVWTNGIFGELFTYLLVWTFMYGIIHVF 393
MAA E P F EA A+R N+A+++YCR ++ +SG+ AGILGLTGL GF FY++AS+ +S+LL LK +W++YF S+ ++T G+ G LFTY+L WTF+YG++HV+
Sbjct: 1 MAAVVAKREGPPFISEA----AVRGNAAVLDYCRTSVSALSGATAGILGLTGLYGFIFYLLASVLLSLLLILKAGRRWNKYFKSRRPLFTGGLIGGLFTYVLFWTFLYGMVHVY 110
The following BLAST results are available for this feature:
|
