TCONS_00062395 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062395
Unique NameTCONS_00062395
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3271

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062395 ID=TCONS_00062395|Name=TCONS_00062395|organism=Clytia hemisphaerica|type=transcript|length=3271bp
TGATGATATTAGCAAAAGATGGCTCCACATTCCCACTTATAGGTCACGAA
CTACCATACGCCATCCGTATGAATCACATCCGAGCATTACATGAATATAC
ACACGATGAGAACGACAACCATTATGAACAGTCTGGCGTATTGGACGATG
ATGGAAAATTACAATTCATCGTCAAGAAAGCCAAAAAAGGAAATACAAGG
AACAATTTAGACATTGCGAACAACAAGAAGAAATGGAAGATCAAGAAATC
ACCCATCATCAACTGGGCGATGAACAAGACCACCGTCAAACCGGCTTTCA
ATCCACAAGATTCGCTGCCCATTGGAAAATTGTTCAGAAATCCGTTGATA
CAGTTGTCCAACGATGAAAATGTCATCCCAAAACCGATACTGGATATGTT
GGTTCAACTCTTCCGTAGAGGTCCAGCAACGTCTGGAATCTTCCGAAAAC
CTGCATCAGCAAGAGCAGCAAAACAAATCAGATCACTTCTTGACGAAGGC
AAAGACGTCGATTTCGAGGAAACCAGTTCCATCGTAATAGCAACCGTACT
GAAAGAGTTTTTTCGGACACTGCCCGAAAGTTTGATCATTTCAGACCAAT
ATGATAATCTGTTGGCAGCAAAAAGCATTACTGATAGCGATGCTAAATTG
GAGAcgataaaaacGATACTCCGGCAATTTCCGAAATGTCATTACGAGAC
ACTGATGCGATTCTTATGCATCTTGCATCATATTAATCGATTCTCAAACA
GAAACAAAATGACGGCTTACAATCTGGCAATTTGCGTTTCACCCAGTATC
ATGTTTTTACCAGCCAATACAAAAATGGTAACCGAACAAGCTGCCGGTGG
AAGTGATATCGTATGTTTCATGATTGAAAATTACATTAAGATTTTCTCCG
AGGAGAACGAATATTGCCTTGGGGAGGAAAGCGAGATTCAGCTCGATGAT
GACCGCGCGGACGATTCGGATTACGGCGCAGACGAAACCATTTATAAATA
TGATGAAGAAGGCGACGAACGTGAAGATTCGGAAAAAGAAACGGAACCGA
TTACACCCGATTTCTTGTTATCACCAGTTGACGGTGAATCCGTTTTCTCA
CAATCGGATTCAAGTTTAAATACAAATGACTCTGATGAActcaaaatgaa
attaaatataCCGAGTATAGCTTTGAGCGCAGGTTCGAAAAGCAGTCCAA
ATTCTCCGATGTTGACGAGGCGGAAAAAGATAGAGAAATCATTATCAACG
GACAATAAACTTAATTCTGATTGGTCCGACCAAGAGGGTTATGATAGCGA
GAACTTTCAACGACGATTATTACGTCAGCCGAGACCAAAACGGATGTTAA
GTAGCACAACAACGAGTGCTGAATTAATCGAGCATAAACGACAATTCACA
GACTCAACAGCATCCATAACAAGTGGGGAAGGTGTAAGCCCGAGTAATAG
CTTCAATTCACTTCCATCGTCAGCAACTCTCGTTCCACAACGCCACGTCA
TGCAGCAACCTGTAATTCATCATTTCGCAACCGACTACCGACCGACACCA
AACGTCATTTTCCATGCGGTCGATCGACGACGACAACCGGCCGCGCCTTC
TTACGAAGAACACATTCAGCGAACACAATCAAAACAACGTGTCGTTAAAA
CGCCAACCAGTAAACGACAACCAGTGGTCGCTCACACGACAGTCGTACAA
CACCAAAGCAGCCCTGTCGCACAACCCAAACGAGACAGACCTCACGATTT
ATCTCTTAATACGTCAAAATCATCAATGAGCGAAAGTAACAGCCAACATT
CTATATCCTCTACCAGTAGTAACGAAGAAAGACGCTCAGCAACGTTGTCT
AGGAAACCAAGAgtcaacaaaaatgaaaaaccaatTGTTTCTCCCAAACA
CACGACAAAATTGTCCTTGGAAGAGAAATTCTTCCCAAAAGAAACGTCCA
AATCACCCGGAGAACCCATTAAACCGAGAAAGAAAATGACTAGAGAGGAA
AATACAACGTTAGAAGAATTTATGAACAATTTCATTGAATCGGCACACGT
TACACCAGTCGAAAATGAAAATCGAAATATCGAAGATGAACTGCAACAAG
AGTTAAACAAAGACAATACGATTGAAGATACTTTTAACTCTATTATGAAC
TCCTTACAACATAATGTTCAGCTAAACGGAAATGTTACCGACCGGAAATC
ATCGGAGAGGCGGAATAGCGGAAAGAAACGAACGCCACCACCCACCGCCC
CAAAACCGAGAACAAGTTCTTCATCCTCCTCAGATACGAATACTGCGTCG
ACAACGAGGGAAGTAATCGGTCATGAAGAAATTCAATCTTTGAACAATTT
ATTATCTTCACTTGAAAATACCGCCACTCCAACAGATGAGGAGGGTGGCG
GAGTATTTGTTGAACCGAGTGACACCCCCAGGCCTTCGCAATCGCCTTTC
ACATTAAATCTTAAAACAGACTTGAAAAAATCTCCATCAAACGCCACAAA
CGATGAGCAAAATAAGGCACCATCTTCACTGGCTTTAGAGAAAAAACTCT
TAACAAAGGCACCCCAAAAGATTGATCAGTTAAGACTCAATTCTAACGAA
CGTAGAGAAGAACAGGGACTTAATTCTCGGCCAATGACGGCACGAGAAAT
GAGGCGTACAAACAGGCGGTTAAAATCAGAAATAAGGAACGCTTTTAACG
AAGGAAAATTCAACACCAATTCAAATGAAAGAGCTGAGAGTGTTCGTCAC
AAAACGCTCAATATCAACAATTTCTTTAACGGGCACTTGACCCCAGATTC
TCAAATGACTCAACAAAATAAAGAGAATTTAATAGCAGAAATGTTATCGA
GACAATGTTTCCCAGATAGCATAGAAACCAATAATAATACATTAGACGAT
TATGAGAGTGAGGAGAAAGTTGAAAGCGATACAGCGTTCGCCAAAATCAT
GTCTCAAGCGGAATCATATGTTTAAtattgagagagaaatttttttgtaa
catattcagatttttttttgtaattttttcagtTTGTTGTCAATGTCTTT
TAATTTATAAGCGAAGCAGAATAGTTACAGAGCGAGTTTGTGAGTGAGAG
AGAGGGGCGGCGAGTTCAAGACATGATGAAATTTCATATGATGGATTGAT
GTCAACGGGTTGATTGCATTTCGTAACTCTATAATGCGATGGTATTTAAT
ACCTTATCAGCTTTGATGAGTTAAAAAGGTGTTCGAGAATCAAAACTCGT
TTTTTGAAGTAAACAAAGANN
Run BLAST on NCBI

transcript from alignment at scaffold_364:58847..73155-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062395 ID=TCONS_00062395|Name=TCONS_00062395|organism=Clytia hemisphaerica|type=transcript|length=14309bp|location=Sequence derived from alignment at scaffold_364:58847..73155- (Clytia hemisphaerica)
TGATGATATTAGCAAAAGATGGCTCCACATTCCCACTTATAGGTTGGTAT
AATCAACTTTGTAATAGAAAGATTTTTCCTAGCCAAGTTATAGTCTCCAA
GAAGTCGCATTGCAATATTTTCTAGGTTCCTGATGAATTTATTAAGATTT
ATTTCAATTTATTCATTCAAATTGATTGGTGACTTAGCAAAATCATGAAG
ATTAGGTTCTTGATATTCTGAGGATTTTAATTGATCGGTATTTAGTCACA
TGACCTTATTCCTGAATTTTATTGGTTGATTCCTTAACTTTTCAGGTCAC
GAACTACCATACGCCATCCGTATGAATCACATCCGAGCATTACATGAATA
TACACACGATGAGAACGACAACCATTATGAACAGTCTGGCGTATTGGACG
ATGATGGAAAATTACAATTCATCGTCAAGAAAGCCAAAAAAGGAAATACA
AGGAACAATTTAGGTAAGGGAGGGAACTGGATTTATAAGGAATTTTTTAA
GCTATCTATTTCATTACTTTTCGTTTTTGAAAATGATGTGAACCTCACGG
TTGCCAAACAGTCCAGCCAGTCAATTTATCTAGTTAAGGTATATATCTAG
AAAGAGTCTATACTTTGGATGACTAAAAGGTTTTCAAACTTCACTTCGGG
TAGATTGACAGTTGTTTAGTTCTTCGAGAAGTTAGTTCATTCTTTATTTC
ATAATATATTGACAAGTTAACAACAAACTTTAACTTCCTAAGATTAGAGA
AGTATTGCTCAATCGATAGGTAAACTTTGAAATGTTTTAACAATCTCAAA
ATAGCATTACATCTCTATACCATGAATGGTCGTTCTTTGTGTTGTTAGCC
CACGCAAGCGGGGAAGAAAGTTACAGCACAGTGTGGCTAAAACGTAACAG
TTTTATAATTGACCTGCTAATCTGATAATAAAAGAGTCTATTGAAATGGA
CACGTATAGATAAGGTTCAGTAATGATGTTATAGACCACTAGATTAATTG
TAATCAAGTTAAATCCTCGTGGTTAAATCTGACGTCTTATTGTCAAGCGC
AGATGAGAGTTTACGGGAGATACCATCCAATTGGCTCACTTATGATGACG
TCACTTAGAGGTGACCAAACACGAACGAGATTGGATTCAAACAAGGTTCT
CTTTTTACTGTTTTTCAGTCAGCTGGTATACACAAGTAGGATATGGATAA
AAATATCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTC
TTAAAGTACATCCAAAGCCTGGGATGGTTTCTTATGAATAGAATGTAACG
AGTGGATGAAGGAATGAATGAGTGAATCGTAGAATAAGTGAATAAAGAAC
TTTCGAAAGCCCTCCTATGAATGAATAGATGGTGCACGATCAGGGGTTTG
TATAAGACCTGCACTGGTTTCACCACTTTTATAACACATAACTTTAAATC
ATTTTTTTGATTGACAAAAAGGGGTCCCATGTAGAGACACACATAAAAAG
TGAGAAAAAAATGTTTTACATTTCATACAGACAGTTTAACCAACATATTT
TAACAAATCGGTTTTTATCTCTCTCAAAATCTTTTCATTATAGCGAGAGA
CTAGAAAAGAGAGCAATAATGTGGGTTTTTCTAAGATTTTTTGTAAAATA
GTTGACAAAGTAAAACTGTTTTATGTGTCTTTTTATATATACTCAAACGC
ATAAATTTTTCATTTTCTAGACTTGTCAAGTGACAGTATCTTGTAAAGAC
GAAGCAAAAACAGTTTTAAAATCTTCACTCGAGCAGTTCCAACAAGGGGT
AAGAAAGCAAGAAAGGACTTTCATTTTCATTTTTCGACTTTAAGACTCCC
TCACGTGGGTTTATAGTGACTCAAACTATTTTTGAGATATTAAAGAGCTT
TAAACACACAGATTAACAAAGTTTTAAAAATGTGAAAGTAATTTGCTATA
TGGATGCAATAAACTGACTTTCGTCAAGTTCTCCTTGTCATTGGAACTTA
GTACAGTTGTGTAAGATTTTTTTACTTGGTCTATTTTTAACAATGAAGCA
CATGTTGATTTGCCTTTTAAGACGTAAGGATAGCTGCAATGAATGTCCGC
AAATTAACAGTCATAAACTTATTTTTTGGTCAGTATTCGATTATATAATT
TTTGTGTATACTTTCTCTTTGTAGAACGAGGATCCTAGTGAATACCAGTT
GATGATATTAGCAAAAGATGGCTCCACATTCCCACTTATAGGTTGGTATA
ATCAACTTTGTAATAGAAAGATTTTTCCTAGCCAAGTTATAGTCTCCAAG
AAGTCGCATTGCAATATTTTCTAGGTTCCTGATGAATTTATTAAGATTTA
TTTCAATTTATTCATTCAAATTGATTGGTGACTTAGCAAAATCATGAAGA
TTAGGTTCTTGATATTCTGAGGATTTTAATTGATCGGTATTTAGTCACAT
GACCTTATTCCTGAATTTTATTGGTTGATTCCTTAACTTTTCAGGTCACG
AACTACCATACGCCATCCGTATGAATCACATCCGAGCATTACATGAATAT
ACACACGATGAGAACGACAACCATTATGAACAGTCTGGCGTATTGGACGA
TGATGGAAAATTACAATTCATCGTCAAGAAAGCCAAAAAAGGAAATACAA
GGAACAATTTAGGTAAGGGAGGGAACTGGATTTATAAGGAATTTTTTAAG
CTATCTATTTCATTACTTTTCGTTTTTGAAAATGATGTGAACCTCAAGGT
TGCCAAACAGTCCAGCCAGTCAATTTATCTAGTTAAGGTATATATCTAGA
AAGAGTCTATACTTTGGATGACTAAAAGGTTTTCAAACTTCACTTCGGGT
AGATTGACAGTTGTTTAGTTCTTCGAGAAGTTAGTTCATTCTTTATTTCA
TAATATATTGACAAGTTAACAACAAACTTTAACTTCCTAAGATTAGAGAA
GTATTGCTCAATCGATAGGTAAACTTTGAAATGTTTTAACAATCTCAAAA
TAGCATTACATCTCTATACCATGAATGGTCGTTCTTTGTGTTGTTAGCCC
ACGCAAGCGGGGAAGAAAGTTACAGCACAGTGTGGCTAAAACGTAACAGT
TTTATAATTGACCTGCTAATCTGATAATAAAAGAGTCTATTGAAATGGAC
ACGTATAGATAAGGTTCAGTAATGATGTTATAGACCACTAGATTAATTGT
AATCAAGTTAAATCCTCGTGGTTAAATCTGACGTCTTATTGTCAAGCGCA
GATGAGAGTTTACGGGAGATACCATCCAATTGGCTCACTTATGATGACGT
CACTTAGAGGTGACCAAACACGAACGAGATTGGATTCAAACAAGGTTCTC
TTTTTACTGTTTTTCAGTCAGCTGGTATACACAAGTAGGATATGGATAAA
AATATCCTGCTAAACAAACTTCACATACCTGGCTTGAAGTGAAAATTGGT
AATGGGATGAAATAGAGAGGGAGAAAAGAGGGAGCCTGATTCGCCTAGTA
ATCCAATTCAAGAAAAAAACATCGCATCTCAGGTTCTCATAGAAGTAGAG
CCTTTGTTTTTCAGCACGTTACAAGCAGTAATCTCAATCAAACGTCACTA
TACTCAATACCGAAAGTATCTTTCCTTCTTAACCAAAATTGACATCATGG
TTAGCTTCCCTTGACATATTAACAAGGGCTTAAGCTCAAGGGCTACGCAG
GAAAATGAGTAATAATAAATGATTAAACTGATTCAAGAGTTACATTAGTA
GCCCGGAAGCATGAGCAAAACGAAAGTAAACACGGGATGACGTAGAAAAA
TAACAGTAAGTCAAATCTCTCCATAACTGCGAGCGATTTTCGATTCCAGA
TTTGTGTTCGGTGAGTTACGGTGAGGCTAATGTAACACAAAAAGGTCAGA
AATCAAGACTGAATTCAAAACCAATATTCAAGATATGAAAAGGTAGATGA
TCCAATGAAGTATAAGCCCGAAGGGCTAGAAGTCAATCTCCTTGGTAGTA
TTTGAAGCCAATAAATCCTACCAAAGTTGCGCGGCCTTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAGTCTATTGAAATGGACACGTATAG
ATAAGGTTCAGTAATGATGTTATAGACCACTAGATTAATTGTAATCAAGT
TAAATCCTCGTGGTTAAATCTGACGTCTTATTGTCAAGCGCAGATGAGAG
TTTAAGGGAGATACCATCCAATTGGCTCATTTATGATGACGTCACTTAGA
GGTGACCAAACACGAACGAGATTGGATTCAAACAAGGTTCTCTTTTTACT
GTTTTTCAGTCAGTTGGTAAACACAAGTAGGATATGGATAAAAATATCCT
GTTAAACAAACTTCACATACCCGGCTTGAAGTGAAAATTGGTTTGATTCG
CCTAATAATCCAATTCAAGAAAAAAACATCGCATTTCAGGTTCTCATAGA
AGTAGAGCCTTTGTTTTTCAGTATGTTACAAGCAGTAATCTCAATCAAAC
GTTACTATACTCAATACCGAAAGTATCTTTCCTTCTTAACCAAAATTGAC
ATCATGGTTAGCTTCCCTTGACATATTAACAAGGGCTTAAGCAAAAGGGC
TACGCAGGAAAATGAGTAATAATATATGATTAAGCTGATTCAAGAGTTAC
ATTAGTAGCCCGAAAGTATGAGCAAAACGAAAGTAAAAACGGGACGACGT
AGAAAAATAACAGTAAGTCAAATCTCTCCATAACTGCGAGCGATTTTCGA
TTCCAGATTTGTGTTCGATGAGATACGGTGAGTCTAATGTAACACAAATA
GGTCAGAAATCAAGACTGAATTCAAAACCGATATTCAAGATATGAAAAGG
TAGATGATCCAATGAAGTATAAGCCCGAAGGGCTAGAAGTCAATCTCCTT
GGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAAACTAAAATTTAC
CGCTAAATTTCGAAAAAAATATCAATCATAAACAAAGGAATTGCTAGATT
CAATCTGTCGTCAAAAATGCGGCGCATTTTTTGAGGCTTCACTTTTTCTT
GCCTGAGAAAGGTATGAGATTGACCTCTAGCCCTTCGGGCTTTAAACACA
ATGAGATTATCTATATCGGCAGATGAGGCTAGTCTGTTACATGTTATTGC
GATTTAGTTGATATCAGCAGAAATAAAATATTAATATTTCCTTTGTGACG
TCAGGTCAGAACAATTTAGGATCAGCATAAGAGTATTGGTAATAATGCTA
ATGGTATAACATTTCATCCCAGGGAGAATTTCTGGATCCGATTTTTTTTA
TTTCCTGTACAAAATCATTTCTAAAAGGGATAGTGTGACGCTACTTGTTG
ACAAATGAAATTTGAAAGGTTAGCAAGGGAAAACATTTAATGAAGGAAGG
AGAAATGATTATGTTTCAACCAAACATATGTGTGATGACGAACATTTCAA
AAAAGTAAACTTTGAATGAAAAACTGAAGCCAGTGTTGTAGAATGGTTAG
CTAGGGAGATAGGGAGAGATTTGACGTTGAACATATCAATAAGTTTTGGA
TTTCAAAGAAGACAAAAATATCCTCCTAATTAAGCAAGTGGAAGTGTTGT
TAAAATCTGTATTAAGCTCACAAAATGCTCTATAAGAAACGCATTAAAAT
ACCATGGATCTTAATGCAATTGAACATTTTCTATTATGACAAACACAACA
ACAGTCGAGCATTCCCTTCCGGTTCATGTTAATCCAGTCTAATTTGACAT
TCTATAACTGACAATTCACGATACAATACAGACCATTCTTCTGGATGTAG
GAGAGGAGAGAAGGAACTGGTCTTCTCAGGATTACATTAATGCGATCTAT
AACAACAACAAATTTTTATACACGTATTAGATCATTTTGTCAGCACACTA
GCAGGGGTGACAAGAGTTTTAATGAAGAGCTATTCATTAATCACAGCCTG
TACACTTCCAGGCTCTTTTAGCCAATGTCATCGTTATCATAAACAAAAAA
AGTGACGTCATCGAAAAGAAAAATATAACCTACACTAAACATTGAGTCGC
TAATTGTCGTTGTAAAGATCTCTAGCTGAGTTGGTAAAGTATAATCGGTC
AAACACGGAGTCGGCGAACACTTTTAACAAGGAGACAGGCAGATTTCAGT
GTTATCTTAAAAATCTGTGATTATTGAAATTAGTTGTCGCAATTCCTTTC
GTTGTGCTGATGTTTTAGAGTGGAGCAAAATAATTTTTTTGAGATGGGTT
ACGACAAATCGTTTCATTTATGGAAATACGAGGAAGGTTAGTGTCAACAT
TTTCTTTACAGGACATCAATACAACGTCTTTCTAATGTCCAATTAACGTC
AGCCTGTGAGCGTTGCGCGAAATTGGTAGTGTAGGTAGAAATAACCTTTA
GGTAACGATATTTACAAGTTATTTATAAACAGTAGTATTGACACATTGAA
GATATGAATTTTTAAAAGGCCAAAAGGTCTATCAGAGAAAGTAAACATTT
TGTCAACATCACCTTATAAAGGTTGTTGTCAACTTGACAAACGTTATTCT
ACTTTCCTTAACACTGCCATCTTTATGCAATTTCATCACGGGATTGTACT
AATCCTAATGGAAGGAAATTTGGACATGAACAGGAACAATAGTTTGATTT
ATAGCAACTCTAAATCGTGTTCTGCAGCATGGTTTTTAGCGCAGATTTTT
TATCAGATACGACAGATATTTACCAGACATTGATGAAAATTTGATGACAG
ACGTTTAAGTTGATTAAACATTTTCACATAAGGCTATCCAGTCTTTCTCT
TGCAAGATTAGAAGTGTTGTAGAGGTTGAGAAGAAGTTAAAATAAATTTC
TATTTGGGAGGATGTGTCGCTTGATTTTGCATTGCATTGCCAATGAAGTC
TATAATCTCAAAGAAGGTACTACGATTCCATCTCATATTTTAGTTGGAAT
ACAATTAAATTTTAAATAAATCAGTATAGCAAACCGTAGAATGGAGTCGT
TTATAAAACAGCAAAACAGTGATATATAATGGTACGGGTAATATTAGTCT
GTATAATGGCGTTCAGGTTTTTCATCATTTTCAACTTCTTCTTTTACTTT
GTCGACTAGATGAACAATCATTTCATTTATCAAATTCTCTTTTCTCTCTT
CAGACATTGCGAACAACAAGAAGAAATGGAAGATCAAGAAATCACCCATC
ATCAACTGGGCGATGAACAAGACCACCGTCAAACCGGCTTTCAATCCACA
AGATTCGCTGCCCATTGGAAAGTAAGTCAATTTTGACATAAATTTCATTA
AACCACCAAGAGCAGCCTAAATGACAATGCAACTTACTTCAATCATCAGA
CATAGAGTCTTATATATTTTTTAATTCGATAATGACGCTAAAAAGGAAAA
ATCATCATCGGCCTGGAATCACTGAATCGGCAAATCAGGGGCAGTGTAAA
AGAACAGGTCCGATAAAAGGCAAAATGTTTCTCAAATTTAAATTGGCTTA
GAATGATTTGAGCCAAAAAATGTTAAGGACAGCTGATGCTCATAAAGTTT
AGCCTCTGGTTGCATTTATAAAATCATGACATGGTGGAGACAGTGCCATC
CTTCACAGACCTTGAAAAATTTCACAAAAGTCAACAAAAAGCTTACGAAA
GGAACACTGTGGTCAGAAAATACCGGTTATATTAATTCCCTGCTTTCGAA
ATGATTCACAAAGCCGGACATTTTATGTTTCTTCCTGTCTCTTAGTCTGT
CTCGAGGGGATTTGACAAGCCAGTGAGGACACTTCGCTTAGCTCTAAAAA
GAGGCTGTTCATTCCAACGCTAAAGATAAACATTTCTGAAACATTTTATT
CCTGGTAGAGACTTTCAAAGATCACGCATGACTCTCTCGTCACTCACGTA
CTATTCGATTTGAAATTAAAATTATCGGAAAGTTTAAAGTGAAATCTTGA
AAGTAGGACGAATTTATACATTATGTAGGCCACAATCCAAAACAATGCTT
ACATAATTCTAAGTTTGGCCGAGCCGAGATGACTCATACGTGAGAAAGTG
TATGAGCAAGTTAACATATAAATTAACATCGATTCCAAATCTGATTGTTT
GTTATGAAAGGGTGTGATTTATTCAGTCGCCATATAGAGGATATATAGCC
GACAACTTTTACACGGTTATTGATAGGTTTTCTCACAAAACATCCGGCAA
AATTTCTTATAGAAGAGGTCATCTAATCTAGTTAGTCCGAGCGACACGCC
TATAAGCAATACGTCAATATTTCAAATATCAANTGCTTACATAATTCTAA
GTTTGGCCGAGCCGAGATGACTCATACGTGAGAAAGTGTATGAGCAAGTT
AACATATAAATTAACATCGATTTCAAATCTGATTGTTTGTTATGAAAGGG
TGTGATTTATTCAGTCGCCATATAGAGGATATATAGCCGACAACTTTTAC
ACGGTTATTGATAGGTTTTCTCACAAAACATCCGGCAAAATTTCTTATAG
AAGGGGTCATCTAATCTAGTTAGTCCGAGCGACACGCCTATAAGCAATAC
GTCAATGTTTCAAATATCACATTGATACAACATCAAAACACAGATTGTGC
TGTATGTATGTAACAGTTTAATTTCCAACCTGTTCTTATATAAAATTTAA
CATTTTCAAAACGTAATGTCTTATTAAAATTTATTGACGTGAGAAATGCA
AAAAGTAGACATTTCAAAAACATCCAATAGACTTTAAGTATAAGAAAGGA
TACGGTTCGGTTTCCACAGGATATCACTATGGGATAATCATTAAAGAGAT
TTTTAACCGCACTTATTTTTTTTCTTCACTTTTTGTTCAACAAATCTCAC
CAAATAAAATGAGGTGACAATGAGTGTATTAGGTAACCAGTTAAAATGGT
GGGATCCCTTCTCTTTCTATTTGCTTCAACCTTACTACTGACAAACGTAG
AGTTTGAGATCAAGTGATTTTATTGATGATAAGTGAATCGATTGATAAAG
GAAAGTCTTGAAACAAAACAAACAATCAAACAGACTTAAGGGCAATACCG
TAGACAAAGCTGTATTTTGAAAGCAATATTCGATCAACTATAAAACATTG
AAAACGTACATATTGAAAATAATGAAAGGAAAGGATAAAACTATTGGAAA
CNCGTACATATTGAAAATATTGAAATGAAAGGATAAAACTATTGAAAACA
GCTGAATTGAGCTGAATTGTAAAATAAAGGACAAAAGTTTTGGGAGACAA
GAATGGTATACGATTTATCGTGGAACAGTCCACCCCACTACCATCACAAC
CATCACCATTCGACATTTCTACAAGTGAAGAGATTGAATTTCAAATTTTT
GTTTCGTTCTCACCATTCTAGATTGTTCAGAAATCCGTTGATACAGTTGT
CCAACGATGAAAATGTCATCCCAAAACCGATACTGGTAAGCAAACTCATG
AGATTTTTCAAAAGATATTGCACCGCACTGTGTTCTACATTAGGGTTATG
AAACCTTTTTAACATCGAATTCGAGGTAAAGTNTGTTATCAATACATTAG
GGTTATGAAACCTTTTTAACATCGAATTCAAGGTAAAGATGAATAGATAC
TGAACAAACATTCACCATTTCCAATACTATCGCGTCAGTTTATCAAAATG
TTAAACTCAATCTTTCTTTAGGATATGTTGGTTCAACTCTTCCGTAGAGG
TCCAGCAACGTCTGGAATCTTCCGAAAACCTGCATCAGCAAGAGCAGCAA
AACAAATCAGATCACTTCTTGACGAAGGTAGTTAAATTTATCATTGTTGC
TAGAGCAATTCATTGCCTAATCGAGGGAACTTTTTAGGTAAGGAAAAAAT
GTTCTATTTAACGTGTATGAGAGCCAGCTAAATCAAATACTACTACCAAC
TTGCCCGGGTTAATCAATTTATATTCAAATTTCAGGCAAAGACGTCGATT
TCGAGGAAACCAGTTCCATCGTAATAGCAACCGTACTGAAAGAGTTTTTT
CGGACACTGCCCGAAAGTTTGATCATTTCAGACCAATATGATAATCTGTT
GGCAGCAAAAAGCATTACTGATAGCGATGCTAAATTGGAGACGATAAAAA
CGTAAGAATACACTTATTATTATATATGGGTCAGAAAGTTTACTCAGATG
TTCTTGGGTCGGTTTTTTTCAAGTCTTGAATACGATTGGGAAGTATGCAA
AGATCAGGCGAGTTTTATTTTTTTCCTTCATACCAAAAGTTTTTCGATAA
AGAATCTGGCTAGAAAATGATAATGTAAAACTCTAAGAAGGAAAGGGAAT
CATACTCTATCTCTATACTCTGAATTCACTTCTCTCCTATTTCGTTTTTC
AGGATACTCCGGCAATTTCCGAAATGTCATTACGAGACACTGATGCGATT
CTTATGCATCTTGCATCATATTAATCGATTCTCAAACAGAAACAAAATGA
CGGCTTACAATCTGGCAATTTGCGTTTCACCCAGTATCATGTTTTTACCA
GCCAATACAAAAATGGTAACCGAACAAGCTGCCGGTGGAAGTGATATCGT
ATGTTTCATGATTGAAAATTACATTAAGATTTTCTCCGAGGAGAACGAAT
ATTGCCTTGGGGAGGAAAGCGAGATTCAGCTCGATGATGACCGCGCGGAC
GATTCGGATTACGGCGCAGACGAAACCATTTATAAATATGATGAAGAAGG
CGACGAACGTGAAGATTCGGAAAAAGAAACGGAACCGATTACACCCGATT
TCTTGTTATCACCAGTTGACGGTGAATCCGTTTTCTCACAATCGGATTCA
AGTTTAAATACAAATGACTCTGATGAACTCAAAATGAAATTAAATATACC
GAGTATAGCTTTGAGCGCAGGTTCGAAAAGCAGTCCAAATTCTCCGATGT
TGACGAGGCGGAAAAAGATAGAGAAATCATTATCAACGGACAATAAACTT
AATTCTGATTGGTCCGACCAAGAGGGTTATGATAGCGAGAACTTTCAACG
ACGATTATTACGTCAGCCGAGACCAAAACGGATGTTAAGTAGCACAACAA
CGAGTGCTGAATTAATCGAGCATAAACGACAATTCACAGACTCAACAGCA
TCCATAACAAGTGGGGAAGGTGTAAGCCCGAGTAATAGCTTCAATTCACT
TCCATCGTCAGCAACTCTCGTTCCACAACGCCACGTCATGCAGCAACCTG
TAATTCATCATTTCGCAACCGACTACCGACCGACACCAAACGTCATTTTC
CATGCGGTCGATCGACGACGACAACCGGCCGCGCCTTCTTACGAAGAACA
CATTCAGCGAACACAATCAAAACAACGTGTCGTTAAAACGCCAACCAGTA
AACGACAACCAGTGGTCGCTCACACGACAGTCGTACAACACCAAAGCAGC
CCTGTCGCACAACCCAAACGAGACAGACCTCACGATTTATCTCTTAATAC
GTCAAAATCATCAATGAGCGAAAGTAACAGCCAACATTCTATATCCTCTA
CCAGTAGTAACGAAGAAAGACGCTCAGCAACGTTGTCTAGGAAACCAAGA
GTCAACAAAAATGAAAAACCAATTGTTTCTCCCAAACACACGACAAAATT
GTCCTTGGAAGAGAAATTCTTCCCAAAAGAAACGTCCAAATCACCCGGAG
AACCCATTAAACCGAGAAAGAAAATGACTAGAGAGGAAAATACAACGTTA
GAAGAATTTATGAACAATTTCATTGAATCGGCACACGTTACACCAGTCGA
AAATGAAAATCGAAATATCGAAGATGAACTGCAACAAGAGTTAAACAAAG
ACAATACGATTGAAGATACTTTTAACTCTATTATGAACTCCTTACAACAT
AATGTTCAGCTAAACGGAAATGTTACCGACCGGAAATCATCGGAGAGGCG
GAATAGCGGAAAGAAACGAACGCCACCACCCACCGCCCCAAAACCGAGAA
CAAGTTCTTCATCCTCCTCAGATACGAATACTGCGTCGACAACGAGGGAA
GTAATCGGTCATGAAGAAATTCAATCTTTGAACAATTTATTATCTTCACT
TGAAAATACCGCCACTCCAACAGATGAGGAGGGTGGCGGAGTATTTGTTG
AACCGAGTGACACCCCCAGGCCTTCGCAATCGCCTTTCACATTAAATCTT
AAAACAGACTTGAAAAAATCTCCATCAAACGCCACAAACGATGAGCAAAA
TAAGGCACCATCTTCACTGGCTTTAGAGAAAAAACTCTTAACAAAGGCAC
CCCAAAAGATTGATCAGTTAAGACTCAATTCTAACGAACGTAGAGAAGAA
CAGGGACTTAATTCTCGGCCAATGACGGCACGAGAAATGAGGCGTACAAA
CAGGCGGTTAAAATCAGAAATAAGGAACGCTTTTAACGAAGGAAAATTCA
ACACCAATTCAAATGAAAGAGCTGAGAGTGTTCGTCACAAAACGCTCAAT
ATCAACAATTTCTTTAACGGGCACTTGACCCCAGATTCTCAAATGACTCA
ACAAAATAAAGAGAATTTAATAGCAGAAATGTTATCGAGACAATGTTTCC
CAGATAGCATAGAAACCAATAATAATACATTAGACGATTATGAGAGTGAG
GAGAAAGTTGAAAGCGATACAGCGTTCGCCAAAATCATGTCTCAAGCGGA
ATCATATGTTTAATATTGAGAGAGAAATTTTTTTGTAACATATTCAGATT
TTTTTTTGTAATTTTTTCAGTTTGTTGTCAATGTCTTTTAATTTATAAGC
GAAGCAGAATAGTTACAGAGCGAGTTTGTGAGTGAGAGAGAGGGGCGGCG
AGTTCAAGACATGATGAAATTTCATATGATGGATTGATGTCAACGGGTTG
ATTGCATTTCGTAACTCTATAATGCGATGGTATTTAATACCTTATCAGCT
TTGATGAGTTAAAAAGGTGTTCGAGAATCAAAACTCGTTTTTTGAAGTAA
ACAAAGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039096XLOC_039096Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062395-exon-scaffold_364-1575043694:73114..73155TCONS_00062395-exon-scaffold_364-1575043694:73114..73155Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1575043694:72693..72860TCONS_00062395-exon-scaffold_364-1575043694:72693..72860Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1575043694:64535..64652TCONS_00062395-exon-scaffold_364-1575043694:64535..64652Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1575043694:62371..62434TCONS_00062395-exon-scaffold_364-1575043694:62371..62434Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1575043694:62029..62134TCONS_00062395-exon-scaffold_364-1575043694:62029..62134Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1575043694:61705..61870TCONS_00062395-exon-scaffold_364-1575043694:61705..61870Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1575043694:58847..61453TCONS_00062395-exon-scaffold_364-1575043694:58847..61453Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1510915933:73114..73155TCONS_00062395-exon-scaffold_364-1510915933:73114..73155Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1510915933:72693..72860TCONS_00062395-exon-scaffold_364-1510915933:72693..72860Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1510915933:64535..64652TCONS_00062395-exon-scaffold_364-1510915933:64535..64652Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1510915933:62371..62434TCONS_00062395-exon-scaffold_364-1510915933:62371..62434Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1510915933:62029..62134TCONS_00062395-exon-scaffold_364-1510915933:62029..62134Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1510915933:61705..61870TCONS_00062395-exon-scaffold_364-1510915933:61705..61870Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1510915933:58847..61453TCONS_00062395-exon-scaffold_364-1510915933:58847..61453Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1491911889:73114..73155TCONS_00062395-exon-scaffold_364-1491911889:73114..73155Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1491911889:72693..72860TCONS_00062395-exon-scaffold_364-1491911889:72693..72860Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1491911889:64535..64652TCONS_00062395-exon-scaffold_364-1491911889:64535..64652Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1491911889:62371..62434TCONS_00062395-exon-scaffold_364-1491911889:62371..62434Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1491911889:62029..62134TCONS_00062395-exon-scaffold_364-1491911889:62029..62134Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1491911889:61705..61870TCONS_00062395-exon-scaffold_364-1491911889:61705..61870Clytia hemisphaericaexon
TCONS_00062395-exon-scaffold_364-1491911889:58847..61453TCONS_00062395-exon-scaffold_364-1491911889:58847..61453Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:58847..73155 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.7164e-07	7.6636e-07	0	0.051721	11.4522	10.1407	3.99281	4.7856	2.67055	1.43722	4.16303	3.42034	12.3651	9.27081	2.818	2.80835	12.9371	23.2721	15.0169	12.8198	27.5526	27.8215	9.56148	9.99373	17.9721	18.0313	10.506	8.80495	25.1622	21.4033
Blast
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BLAST of TCONS_00062395 vs. Swiss-Prot (Human)
Match: RHG20 (Rho GTPase-activating protein 20 OS=Homo sapiens GN=ARHGAP20 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.211e-41
Identity = 99/309 (32.04%), Postives = 178/309 (57.61%), Query Frame = 3 
Query:   12 AKDGSTFPLIGHELPYAIRMNHIRALHEYTHDENDN----HYEQSGVLDD---DGKLQFIVKKAKKGNTRNNLDIAXXXXXXXXXXXXXXXWAMNKTTVK--PAFNPQDSLPIGKLFRNPLIQLSNDENVIPKPILDMLVQLFRRGPATSGIFRKPASARAAKQIRSLLDEGKDVDFEETSSIVIATVLKEFFRTLPESLIISDQYDNLLAAKSITDSDAKLETIKTILRQFPKCHYETLMRFLCILHHINRFSNRNKMTAYNLAICVSPSIMFLPANT--KMVTEQAAGGSDIVCFMIENYIKIFSEE 905
             K+ + +PLIGHE PY I+M+H+R     T    D+    + ++  +++    + + QFI+K ++    +   D  +   K +        W  + T +   P+ +P   +P G+LF   L  +  ++N +PKP+LDML  L ++GP T GIFR+ A+ ++ ++++  L+ G +V  +  S  VIA+VLK+F R +P S+  SD YD+ ++     + + K+ T++ +L Q P+ +   L     +LH+I + S+ N+MTA+NLA+CV+PSI++ PA++  ++  E     S ++ F+IEN ++IF EE
Sbjct:  249 GKEEAPYPLIGHEYPYGIKMSHLRDSALLTPGSKDSTTPFNLQEPFLMEQLPREMQCQFILKPSRLAAAQQLSDSGHKTFKRRRSIINWAFWRGSSTHLDNLPS-SPTSPMP-GQLFGISLPNICENDN-LPKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGVEVHLDCESIFVIASVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAVCVAPSILWPPASSSPELENEFTKKVSLLIQFLIENCLRIFGEE 554
The following BLAST results are available for this feature:
BLAST of TCONS_00062395 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHG201.211e-4132.04Rho GTPase-activating protein 20 OS=Homo sapiens G... [more]
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