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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062414 ID=TCONS_00062414|Name=TCONS_00062414|organism=Clytia hemisphaerica|type=transcript|length=668bp
GATAAATGTTACAATGACAAGTTATTTCATTTGGTTAAATTATATCTTTC
ATAAAGTTAAGATAAACTATTATAAGGAATTCTAATCAGCAATCATACGT
TTGAATTCTGATAAATTTAGTGAGTTACATATTCTAAATCTTTCTTCTTA
ATCCCATGCTCCTGGTTCCCCGTAAATAAATGAAAGTTCAATATTTCATC
AGTTCAAATAAGTTGTGTTGTTTCATTTCCAGTCCAGTTCAGCCTAGCAT
TTCTGGGTCAATATCTGGAATGCATTCTTCCATTGTGAAGCTGACATTTT
CGCAAGCTTTGTCCAAACACACGTTTGCTTGTCTGGTCACCTGTTGACTG
ACACAGTCCATTACTTTAGCTGATAGACATTCTTCCATTGATGACTTCCA
ACACATTTTGTAGATGTTGTCATCCTTCAGTAGATTTATATTCATGTGGC
AAGCTTTGGTGGCTTGAGTTTCGCAAGCCTCGATTCTCATTCGGTCTTCT
TCAGTCATTTGTGGCTCTTCGTCGATTTGTGGCTCTTCATCGATTTGAAA
TTCACCTTGAGCATAAATTGCCACACAGAAAACGAGCACGAAGACATTGA
GAAGGCGAGCCATGGTTACAGTCTTTGTTACAAAGCTGAATGGTAAAGAT
TCAGTTGGATTCTCAGTC Run BLAST on NCBI transcript from alignment at scaffold_364:228412..229217- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062414 ID=TCONS_00062414|Name=TCONS_00062414|organism=Clytia hemisphaerica|type=transcript|length=806bp|location=Sequence derived from alignment at scaffold_364:228412..229217- (Clytia hemisphaerica)
GATAAATGTTACAATGACAAGTTATTTCATTTGGTTAAATTATATCTTTC
ATAAAGTTAAGATAAACTATTATAAGGAATTCTAATCAGCAATCATACGT
TTGAATTCTGATAAATTTAGTGAGTTACATATTCTAAATCTTTCTTCTTA
ATCCCATGCTCCTGGTTCCCCGTAAATAAATGAAAGTTCAATATTTCATC
AGTTCAAATAAGTTGTGTTGTTTCATTTCCAGTCCAGTTCAGCCTAGCAT
TTCTGGGTCAATATCTGGAATANAAATCTTTCTTCTTAATCCCATGCTCC
TGGTTCCCCGTAAATAAATGAAAGTTCAATATTTCATCAGTTCAAATAAG
TTGTGTTGTTTCATTTCCAGTCCAGTTCAGTCTAGCATTTCTGGGTCAAC
ATCTGGAATGCATTCTTCCATTGTGAAGCTGACATTTTCGCAAGCTTTGT
CCAAACACACGTTTGCTTGTCTGGTCACCTGTTGACTGACACAGTCCATT
ACTTTAGCTGATAGACATTCTTCCATTGATGACTTCCAACACATTTTGTA
GATGTTGTCATCCTTCAGTAGATTTATATTCATGTGGCAAGCTTTGGTGG
CTTGAGTTTCGCAAGCCTCGATTCTCATTCGGTCTTCTTCAGTCATTTGT
GGCTCTTCGTCGATTTGTGGCTCTTCATCGATTTGAAATTCACCTTGAGC
ATAAATTGCCACACAGAAAACGAGCACGAAGACATTGAGAAGGCGAGCCA
TGGTTACAGTCTTTGTTACAAAGCTGAATGGTAAAGATTCAGTTGGATTC
TCAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062414-exon-scaffold_364-1575043694:228956..229217 | TCONS_00062414-exon-scaffold_364-1575043694:228956..229217 | Clytia hemisphaerica | exon |
| TCONS_00062414-exon-scaffold_364-1575043694:228412..228817 | TCONS_00062414-exon-scaffold_364-1575043694:228412..228817 | Clytia hemisphaerica | exon |
| TCONS_00062414-exon-scaffold_364-1510915933:228956..229217 | TCONS_00062414-exon-scaffold_364-1510915933:228956..229217 | Clytia hemisphaerica | exon |
| TCONS_00062414-exon-scaffold_364-1510915933:228412..228817 | TCONS_00062414-exon-scaffold_364-1510915933:228412..228817 | Clytia hemisphaerica | exon |
| TCONS_00062414-exon-scaffold_364-1491911889:228956..229217 | TCONS_00062414-exon-scaffold_364-1491911889:228956..229217 | Clytia hemisphaerica | exon |
| TCONS_00062414-exon-scaffold_364-1491911889:228412..228817 | TCONS_00062414-exon-scaffold_364-1491911889:228412..228817 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_364 | supercontig | scaffold_364:228412..229217 - |
Blast
The following BLAST results are available for this feature:
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