TCONS_00062440 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062440
Unique NameTCONS_00062440
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2900

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062440 ID=TCONS_00062440|Name=TCONS_00062440|organism=Clytia hemisphaerica|type=transcript|length=2900bp
TTTAGACTCCAGTCCTGATGAAATACGAAGTTGTTACAAAAAGTTGGCAT
TGAAATGGCATCCCGATAAACATGGTGACAGTAATGTATCAAAAGATGAA
GCCACCTTGaaaTTTCAAGAGGTTTCAGCAGCATACAAACGTCTGACAAC
AAATATGAATGATGCGGATGACGAAATTGATGATAATGAGTTCATGAATA
TCCGTGAAATGATGGAACTATTTGCTCACATATTTTTTCATAATGGTGTT
CGTGGTTGTCCACATCATGGTATGGATTGTTGTGATTATGAAGATGATGA
ATATTTTTACAGTGATGATGAATATTACGACTACACAGATGAAGAAAGTG
AAGATGAACTGCTTGATTCCATTGCACAAAGGTTACGGAACAAATATGAA
CAGAGGAAATATAAACCGAAGGACCGGATGCAAACACAACGGCATAATAT
AACGGAAGAAGAAGCTTTAAGGAATGCAAGAGAGCTTatagaagaagaag
aacaagaaaaagaaaggGAAGAGAAAAAGAAAGCCAAAAGAAAGaaaaag
aaggaaaagaagaagcaaaaagaaaaagaaaagaaagaaactgaAATAAA
TACCACAACTGAAAAGGATGAGGAAATACTAACGAAAAAGCTCAATAAGG
AGAATAGCAATCCAAACAATCAGAATAAAAATATATCTGATGAAAAACCG
ACAGTGGTCAATCAGAAACAACAGCAGCAACAACAAATAccgaaaaataa
caaacaagATAATAATACTTCTGGCAAGAAAAGCAAAGGAAATGAGAACA
GCAACAAGAAGAATCCCaaaaataaacaagattcaGGAAAGAAAGATAAC
AAAAATAAaaataataaGAATATTGAAGGTGACCATGATGAGGACTTGAT
TGATACCAATAGTGCATTCTTTGCTCGTGCAGCAAGCAAAGCACCGACGG
TCAGTAACGAAGTCACCAGTCAACAACACCAAAAAGAAAATACTTCATCA
TCCTccaataataataaaaagaaaaaaggtgGTGCTAACAGTGGTGGTAG
TGGGACAACAAACCACATCCAACAGCCGCAAACGCAACAACCCTTGCATA
ACAACCATACAACCGAAAATAATAAtagcaaaaagaaaaaggttcCACCA
CCTTTATCGACCACTTCGACAAGTTCGTCAACTTCAAATACAACTACAAA
TAACCAAAAGAATACATCAACATCTAAAAATACTACATCTCAAAAATCAC
ATATATCACCGAGAAATAGTGAACCTTCATCGCAAAAATCACCCCCTTTA
ACCAATGGGGACCATAAACCAGATGATATAATATTACAGAGCCGACAGGT
GGCTGTCCAAGGTAACCAATTGGCACAACAAAATGATTATACTGGAGCAG
TTGAGATGTTCACAAAAGCAATATCACTGGACCCAACAGATTTCAGattc
tttGGAAACAGATCATATTGTTTTGATCGACTGGAAAATTATACAAAAGC
ATTGGTTGATTCAGATGCCGCAATAAAATTGGCACCTGAATGGCCGAAAG
GTTTTTTCCGCAAAGGGAGAGCTTTAACTGGATTAAATCGATTCCAAGAA
GCAGAACAAGTCTTTCAACAAGTATTAAAACTGGATCCAGGTTGTGAAGA
CGCACAATTTGAACTAGCCCGTGTTCGTGTACAAATACTCATCGACATGG
GCTTCACTCCAAGTTTGTCTGAACAAGCAGTCCGAACTTATAGTACAGTA
CAACAAGCTTTAGAAGCTCTGTTAGCTGGAAAAGTAAGTGACGAAGAAGG
TTCAGATGAAGTATATTTCTCAGAAGATGACGAACCACCTGCATCGCCTA
CATATCATACTgttcaaaataataataaaaagtcTAACAATAAACAACCA
AAAGCTCCACCGCAGCCTAAATGCACAGCATTATGGGTTGGCAATGTGGA
TCCACAACTGGTGACCGAAAAACAGATGAGTCAGCTCTTTGGTAAATGTG
GGAAGGTGTCTTCAGTTCGTATACTACCTCATAAATATTGTGCTTTCGTC
AATTATATGGACCCGAAAAGTGCTGTAGCAGCAATGGAAAAATTACAGGG
TGCTGCTCTTGGCaatcaaaaattattattacGTTTCCCAAATAATCCAC
CACCTGGCTCGATCGTTCCTGAGCCTTTATCCGTCAATACAAAAACTTCC
GCATCGAGTGCTACTCAACAAGCCAAAACGAGCCCATCTATTAGCGAATC
GAGCAACGACTCAAGCAAAGCAAGTGGTCCTGTGAATGGAAACGAATGTT
ATTTCTGGAGAACAACTGGttgtgtttttgaaaatcaatgtcGATACAAA
CATGTGCGAGGTCATAAGGGAGTTGATCTCTCCAAAGTACAAGCAAAATA
TGGTACCAAATTGAGTAGCTGAAGAGTCAAGAAATTTGAGATGAGAAGAA
AAGACAATCTTGGATGGTTAGACTATATAAATGAAGAAAGACATCAATGA
TCTTTAGAttgttgtaatatttttttggtcAATTCTTGTAGaataaattt
cttctttttgctACTTTGAGAGAGGGGAGAGAGTGACCTTCGTGTTTGTA
TTATtgtcttttcatttttgttgatttttatttcaaagtgaCGATGCAGC
GCTGGcttctttttgatttgattctgaTTGTAAATTGCcactgaaaatgt
tatttgagATCGAAAAACAAAGCCGTGTTTTGTTCTGTTgctattttctt
tctttccctAGATAAGAGAGACATTTGATAGATGAAATTTCAGGAATTTT
TTGCTTGTCAATAAAATTATCCTGCTTATAATTATTAAAGAGAATAAAAC
GAATATTTTCGTATGTGAcataaaagaaagtaaaaagaaTTATAAAGAAA
Run BLAST on NCBI

transcript from alignment at scaffold_364:386589..396515-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062440 ID=TCONS_00062440|Name=TCONS_00062440|organism=Clytia hemisphaerica|type=transcript|length=9927bp|location=Sequence derived from alignment at scaffold_364:386589..396515- (Clytia hemisphaerica)
TTTAGACTCCAGTCCTGATGAAATACGAAGTTGTTACAAAAAGTTGGCAT
TGAAATGGCATCCCGATAAACATGGTGACAGTAATGTATCAAAAGATGAA
GCCACCTTGGTAATTTTATGATCATGCTCAATTTTTGTCCTCTTTAATAA
GATCAGTAATTATGATAACCTTTCAGATGGTTTACTGCTAACTGTGAATT
AATTGAAAGTTTAGTAACTTGAGTAAAATTTTCTCTTTTCAAAAACATTT
TTATAGTTTTACTGGCTTTTCCTATTTTTAACTTCAGTTAGAGCAAGATT
CTGAGAATGTGTGTCAGTTGTCTTCAAATCTTTGGAAACTGTTAGTCAGG
ATTTTTTCCCTACCTTAAAGACATATGCACCACTCAAATTAACTAAAATG
ATAGCATACACTCATTTCGTTTTATAAGCATACGGTAAATTTCGGCTGAA
GCTCACTTTGCTTAAGTAAAGCTCAATTTTGAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCATTTTGTTTGTAATTC
TCTTCTTCATTCTTCTGTTATTTTCTGAAGTTTTGGAAATTATGATTCTA
AAAATTTCTTTGGCTGAGCCTCAAGGAATGCTTAGCATATGCTTAATTTT
TCTGGAAATTTGAGCTTCAGTATGCTTATAAACGTTATGCTTATAAAACA
AAATGAGTGTATTCATTCTTGAACAGAGGTGCTTTTGAGTCTATCCGTAT
TCTGAAAATTGGTTAAAATAGGTTGCTAGCAAAGGGAGGAAGAAAATTTT
TAAGATTTTTGCCCAGTCCAATACTGCAAAACTAGGTGTTTAGAAAGATG
GGTTCAAAGAACTTTGCTAACCCGTTTCCCCTCCCCCCTTTTCTAGATGA
ACCTGCCCCATTTTGAAAACTTCCCATTTTCTTCAAGAAATTCTCTTCCC
CCCCTTTCTGAGATTTTTTGAACATCGCTACCCCCTTTATAAAGGGGATG
CAAACTATGTTTAGCCTGTTGCAATGCTCATGTTGGATGACATTATAATA
TATATTTTAGTTTATATTTAACTCCAATTTTTCTTTCCAGAAATTTCAAG
AGGTTTCAGCAGCATACAAACGTCTGACAACAAATATGAATGATGCGGAT
GACGAAATTGATGATAATGAGTTCATGAATATCGTGAGTCTGATGTCCAT
CTCAGCATTTTTTCTTCCAGTTTTTATAGTTATACATTTTCATTCAAGTT
TGAGGATTATAAAACAAATGCTAATCTAATTTTTATTTCATTTCATTATA
TTATCTTTTCTAGCGTGAAATGATGGAACTATTTGCTCACATATTTTTTC
ATAATGGTAAGTTTATTGCTTCATTTATCTTACATTTGTACCAGAGCTCA
GAGATTAAAATTTTTACTATAAAAATCATAACCCAACTTGTATTTTGAAG
TATTTACTCCTACAACCTTTATAATCAAGTTTGAATTCACAAAACACTAA
GGCTGGACTTAAAGAATTGTTGGTTTGCCGTCACCCGACCGACCCTACCT
CGAAACCTACCGACCCAAAAAACTTTATTGCCATTTTAAAGAAGATTTTT
TTTCCTTCAAAAACTTCAAACAATAAAAAATCGAAACTCTTATCTTGTTT
GTCTCAGGCATAAGAATCGTAAATTCCCTGCTAGCACTTCTGTTATTTAT
TCAAAATTACCTAAATGTAAACAAACTGTTAACCCTTCCATGGACGACCA
ATTTTTTAAGCCCAGCCTAATATATGCAATTGCGTTAGTCAGTTAGTTGG
TTCTAGCTCTATTTTTGTGTCTTGTTGCAACAAACTAAATATTACAAAAC
AAAAGACAGGCTTGGATACTAAACTGAAATCGTTTTTTATTCTAGGTGTT
CGTGGTTGTCCACATCATGGTATGGATTGTTGTGATTATGAAGATGATGA
ATATTTTTACAGTGATGATGAATATTACGACTACACAGATGAAGAAAGTG
AAGATGAACTGCTTGATTCCATTGCACAAAGGTAGGTATTGTTTACTTTC
ATGTATGATAGGTTGAGCCAGATATTAATATTAATTTGTCACAATTACTT
ATCACTGTTGGTTTGAAAACCAAAGAAAAATTAATTTTTCAGTTCTTTTT
TTATTACTGTTAGCTTAAAATTTTTAATGATAATATTTATACTTTGAATT
TAATGAGTTATTCGGTTGAGCAGTTGAGCTCAAATTTCAAGATTTTGCCT
GTTGGAGATTTCAAAATTGTAGACAAATTGTAGACAAGGCCACTCCTAAA
ATTGATATCAATACCACTTGATAACTGTAAAATACCTGTAAACATTTGAA
TCGATACCAATTTGGAAATTTCCAGCACAAAGACANGGCATAAGAATCGT
AAATTCCCTGCTAGCACTTCTGTTATTTATTCAAAATTACCTAAATGTAA
ACAAACTGTTAACCCTTCCATGGACGACCAATTTTTTAAGCCCAGCCTAA
TATATGCAATTGCGTTAGTCAGTTAGTTGGTTCTAGCTCTATTTTTGTGT
CTTGTTGCAACAAACTAAATATTACAAAACAAAAGACAGGCTTGGATACT
AAACTGAAATCGTTTTTTATTCTAGGTGTTCGTGGTTGTCCACATCATGG
TATGGATTGTTGTGATTATGAAGATGATGAATATTTTTACAGTGATGATG
AATATTACGACTACACAGATGAAGAAAGTGAAGATGAACTGCTTGATTCC
ATTGCACAAAGGTAGGTATTGTTTACTTTCATGTATGATAGGTTGAGCCA
GATATTAATATTAATTTGTCACAATTACTTATCACTGTTGGTTTGAAAAC
CAAAGAAAAATTAATTTTTCAGTTCTTTTTTTATTACTGTTAGCTTAAAA
TTTTTAATGATAATATTTATACTTTGAATTTAATGAGTTATTCAGTTGAG
CAGTTGAGCTCAAATTTCAAGATTTTGCCTGTTGGAGATTTCAAAATTGT
AGACAAATTGTAGACAAGGCCACTCCTAAAATTGATATCAATACCACTTG
ATAACTGTAAAATACCTGTAAACATTTGAATCGATACCAATTTGGAAATT
TCCAGCACAAAGACAAATATACCTGTACTCCTCCTCAAAAAAACAAAAAC
AATAGCCTGAAATATCAAAATGCTTTTCACAGTACTTTCAGTAAGATAAA
GATTGACATCACTTTAACCAAAATTTCTGAGAATTAATAAAGTTTATATA
AACTTTAGAAGAAAATTTCATTAAAAGTCTGACTCGGTGTATGGGGTTTC
TTGAATTTTAAAAAGAAAATATTTATCCATATCATATCGATTACAAAATA
ATCAGAATGAAACTCTTGAAACAGACAGGAAATCGAAATTTGAGATACTT
GGTTAAAACATTGGTTAAAACAGGTTAATGATTTTCTGAAGATAAAATAG
CATTTTGTTTGTTGGCTTATCATGTTGATTTGGTTTGAATGTTTTATCAG
AAAACTGGAATCTTACGCTTACAGGTTACGGAACAAATATGAACAGAGGA
AATATAAACCGAAGGACCGGATGCAAACACAACGGCATAATATAACGGAA
GAAGAAGCTTTAAGGAATGCAAGAGAGCTTATAGAAGAAGAAGAACAAGA
AAAAGAAAGGGAAGAGAAAAAGAAAGCCAAAAGAAAGGTTTGATTTTAGG
GTTTATCACATAAAATGTACAACTTTATTCAAAATGTGCGATTTGAAAAA
CTCAAAGGATAATGACTGAAAACTTATAGCTCGCATGGCTGGTACACCGT
TTTTATTGATTGTTATTAAGTATGGGACTAATATTTTGTTTTTTGTATAA
AATAATGGAATGGTATTTACATTTAACCTTTTTTTTTCAGAAAAAGAAGG
AAAAGAAGAAGCAAAAAGAAAAAGAAAAGAAAGAAACTGAAATAAATACC
ACAACTGAAAAGGTAATAAGAAATTAGTCAGAGGGTATTAGATTCACCAA
TAAAACATTTTCCTAATTTGACGGCTGTGAGTCAAAGTTTTGCACAGAAT
GGACTTCTTCGTCAAACAAATAAAAAATGGAACAGTGAATGGTTTCAAAG
TGTCTGTGTAAATGAAATTTAAAATTCTATCTCATAATTTTTCCAACAGG
ATGAGGAAATACTAACGAAAAAGCTCAATAAGGAGAATAGCAATCCAAAC
AATCAGAATAAAAATATATCTGATGAAAAACCGACAGTGGTCAATCAGAA
ACAACAGCAGCAACAACAAATACCGAAAAATAACAAACAAGATAATAATA
CTTCTGGCAAGAAAAGCAAAGGAAATGAGAACAGCAACAAGAAGAATCCC
AAAAATAAACAAGATTCAGGAAAGAAAGATAACAAAAATAAGTAAGTTCA
AGATAAAACCCTTCAAAACTGCTCCTCCATGTCTCACCTACAATTCAAAA
AATTAACAAGACCTTTAATGTTCGCTGTCAGACATTTTAATATACTTGTA
TTAGTTTATACTTGACATATAAGAGATGAAAATTCGTTCAAAAATGTGTT
ATTTTTGATTTAGTCTGTTGCACATCTTATAGTCATGCATTTCATTGATT
CACATTTCCATTTTTCACTTAAATCAGGGGACTTCACATGGACTGAAATG
TCAAGAGAAATACCTGCAAATAACATGCTTATATGAAACCAGCGGTTCTA
GCTGCTCTTGGCAGCTTGGCTTCCGCTTTTCCTTATGGTCAGAAAATAAA
TATTGACAATTGATGTTTTCTTTTTTAGAAATAATAAGAATATTGAAGGT
GACCATGATGAGGTAATATTATAATTCACCTCAAATTTCCCATTACAGAT
TATATCAATATCTCATTAACTTAACAATACAAACCGTCAGTGTGTTCAGG
TGTGATGAATGTGATGTGTGGTGATTGTGATGTGTGGTGATTGTGATGTG
TGGTGATTGAGCGTGTTTTTTATCAACCTTATTTGTCAAATAATGCTTTG
CAAATGTAATAATCCTGGATAATCTAATTATCTTCAGTCTAGCTGTTGGG
CTATTGATTCATTCTTCTAGGTCTCTTTCAAAGTGTTTTCTTCACATTCC
AGGACTTGATTGATACCAATAGTGCATTCTTTGCTCGTGCAGCAAGCAAA
GCACCGACGGTCAGTAACGAAGTCACCAGTCAACAACACCAAAAAGAAAA
TACTTCATCATCCTCCAATAATAATAAAAAGAAAAAAGGTGGTGCTAACA
GTGGTGGTAGTGGGACAACAAACCACATCCAACAGCCGCAAACGCAACAA
CCCTTGCATAACAACCATACAACCGAAAATAATAATAGCAAAAAGAAAAA
GGTTCCACCACCTTTATCGACCACTTCGACAAGTTCGTCAACTTCAAATA
CAACTACAAATAACCAAAAGAATACATCAACATCTAAAAATACTACATCT
CAAAAATCACATATATCACCGAGAAATAGTGAACCTTCATCGCAAAAATC
ACCCCCTTTAACCAATGGGGACCATAAACCAGATGATATAATATTACAGA
GCCGACAGGTGGCTGTCCAAGGTAACCAATTGGCACAACAAAATGATTAT
ACTGGAGCAGTTGAGATGTTCACAAAAGCAATATCACTGGACCCAACAGA
TTTCAGGTATATTTCTCTAAAAAGTGCACTCATTTTGTTCGGTGGGTGAT
TTTGCTCATAAAAATTTATGCATTAAGATACTGTCTTCTTAAATGGGCTT
TATAAAGCTCAGGAATAATGCGACAATTTGAATATATTGCATTTTATAAA
GCTCAAATAATTGGTTTCTTCGAAATGCTCCCTTGACACTTGTGCTTTAA
ACTGCTTTAAAAAGTTTTCTTATTTTACATTTCTGCTTTTATTTAAGATG
GACTTTTTTTGACTTTCCTTTTTTTTCAGATTCTTTGGAAACAGATCATA
TTGTTTTGATCGACTGGAAAATTATACAAAGTAAGTCTGGAAAAGGCTTT
TGAATTCACGCGAGGGATCTTCCAATTCAGCTTTGGACTACATACACTCT
TTTAGGAACAAGTAGCTCAGTTTTATCGAAAAACATGAGAACAAATTCTG
AATAAGATGTAGGAAATTGCTATAAAATACTGATTCTTATTCTATAAAAG
AAGAAAGTGAACATATTTTAAGAAACTTATTAACTAACTAACTAATTTGA
GAAAATTCAAGCTTGGAAAATAGGACTCCTATGAAAAACTATGTACATCA
GTGTATTAATCAGACAGTATGAGACCAGAATTTTGACCTTCTGTTAATTA
TTTCTCCTTACAGAGCATTGGTTGATTCAGATGCCGCAATAAAATTGGCA
CCTGAATGGCCGAAAGGTTTTTTCCGCAAAGGGAGAGCTTTAACTGGATT
AAATGTAAGCATTTTCACATTTTTATTTATGAAGAAGTTGCGATTTCTCA
GTTTCGACTCTCTTTCTAAATTGATGATTCCTTTTCCCACAAATCGCCAA
AAATGAATAATTTTCTTAATACTGTTTCGTCTTATGTAGGATGTTTCGAG
GTCAACTCTTCAGCTGAAGCTAACACATGCTTACTCTTGTCTCCCGAGTA
GACGGGGGGGGGGGTTGCCAAATCTTTTTGTTTATTTTGAATTTCTGATA
TTTTCTGCTGATTAGCCAGGTACTGTAGGTCCATAAAAGTATCGCTATTT
CTTCTTTTTGTAGCGATTCCAAGAAGCAGAACAAGTCTTTCAACAAGTAT
TAAAACTGGATCCAGGTTGTGAAGACGCACAATTTGAACTAGCCCGTGTT
CGTGTACAAATACTCATCGACATGGGCTTCACTCCAAGTTTGTCTGAACA
AGCAGTCCGAACTTATAGTACAGTACAACAAGCTTTAGAAGCTCTGTTAG
CTGGAAAAGGTAACTGTTTAGCTTTTTGAAGAGATGATATTTAGGCTCTC
TGAACTCTGAGGTTATTTTTTCTATAATGTGCGTTTAGGGACAATGGCAC
AGTGATTATTCAGAATAAATGGGACAAAGAGCAAACTACCTTTTGAAGAG
ACACCACTAATTTTGATAGTTGGTATTTAAACTAAAATTTATTTATCATA
ATGCCCATACTGAATGCCAACCCTAAAATCAGTTTCACACAACCACTAGA
TAAATGATGATTGTGCCCGGGTAGCTCAGTCGGTAGAGCATTCGCCTTAC
AATCTAAGGTTGTAGGTTTGATCGCAGTTCACCGTCTACTCAGCGAATGA
GTAGCTTAGATTGGGTAATTTGATCTAAGCAGTAAGTCACTGGGAGCTGA
GATCAGGTATGGTGTTCCACCTCAGCATTCGACCTCCCGACCTAGCACAA
ATAGAAAAGGAGATACACTCACTCACTCACTCCCGTCTCCGCCGAGTAAG
AGGTCAATAATTTTACCTTATTTTCTTTTTTTGCGCATGTGCAGTAAGTG
ACGAAGAAGGTTCAGATGAAGTATATTTCTCAGAAGATGACGAACCACCT
GCATCGCCTACATATCATACTGTTCAAAATAATAATAAAAAGTCTAACAA
TAAACAACCAAAGTAAGTAAAATTGAATGACTCTGCAAGTCTTTAGTTTT
ATATTAACATATTTATATTAAAGTTTTCCATAGGCAGTTTTCATTGAAAA
TCTTTCTTTTTGTATAACACATTATTTTTTAATGACAAAGGCTTACAAAC
CTAGCATTTCCTTTTAAAGTATGGCATATAACTTGTTCATGTATACAAAA
TTAGTAATTTCTTTTCTTGTCATTTTTAGAGCTCCACCGCAGCCTAAATG
CACAGCATTATGGGTTGGCAATGTGGATCCACAACTGGTGACCGAAAAAC
AGATGAGTCAGCTCTTTGGTAAATGTGGGAAGGTGTCTTCAGTTCGTATA
CTACCTCATAAATATTGTGCTTTCGTCAATTATATGGACCCGAAAAGTGC
TGTAGCAGCAATGGAAAAATTACAGGTAAATTTTTTTGCGGAAATTTCCA
GCCACTGGTATCATTAATGAACTTAGGACCCTGGGCAATTACAAAAGCCA
TCTTTAATTTGAGTTTTTTTGGAAAGTGGTACCCGCAAAAAGAGGCCTGG
AAGTGTTAAAACTTTGCCTGACACTAGATCAAAAGTTTCTTGATGTATTA
CACCGCTATTGACTAATTCTAGTGGTACCCACTTCCAAAATAACTTCGAT
CAAAAGATTTTGCTTGACCGGGATTGAGGAACTGCCATCAGGGTAATTCA
ATGGTTTTCATATTTTATGATTTGCCAGTATTGTTTCGTTAGCTTGCTAT
ATTTTCTTTGACCAACTTGCGTACAATTTCATGTCGTTAGTACAGGTTAG
TATGTTTAATATTCTCTTATTCTATTCAGGGTGCTGCTCTTGGCAATCAA
AAATTATTATTACGTTTCCCAAATAATCCACCACCTGGCTCGATCGTTCC
TGAGCCTTTATCCGTCAATACAAAAACTTCCGCATCGAGTGCTACTCAAC
AAGCCAAAACGTTAGTAGTTAGTATTCCATTTTTTATTTATTTTACTTTT
TATTTTATTTAATTTTAAATTATTCATTGTATTAGGTAAACAACCATAAT
CTAGAACGGATTTTAAGTGAAAGCGAATAATACCATTGGGACATTCCATA
TCCATACAGGGGGTGGGCGGACAAACGTTTGTAGGGTGTATCCTGAGAAG
AATGAGTGTTTTTCAGTTTTCCAGGAGGGAAGAAGTTATTTTGAAATTAC
CAGGGGTAAGACTGATCTTAGTTCGTCCACCGTCACTTTAAAGTATGAAA
ATAATATTTTCAAGGATTTTTTTTTTTGTAAATTTTGCTATTTTCCAGGG
GGTATTCATATATTTCCAAGAATTCTTTTTTGACTTGGAAAGGTTCCCCC
CCCCCCCTAATGACATCATGTTCCAATAAGCAATATTATTTTTGTCCCTA
TCTCAGGAGCCCATCTATTAGCGAATCGAGCAACGACTCAAGCAAAGCAA
GTGGTCCTGTGAATGGAAACGAATGTTATTTCTGGAGAACAACTGGTTGT
GTTTTTGAAAATCAATGTCGATACAAACATGTGCGAGGTCATAAGGGAGT
TGATCTCTCCAAAGTACAAGCAAAATATGGTACCAAATTGAGTAGCTGAA
GAGTCAAGAAATTTGAGATGAGAAGAAAAGACAATCTTGGATGGTTAGAC
TATATAAATGAAGAAAGACATCAATGATCTTTAGATTGTTGTAATATTTT
TTTGGTCAATTCTTGTAGAATAAATTTCTTCTTTTTGCTACTTTGAGAGA
GGGGAGAGAGTGACCTTCGTGTTTGTATTATTGTCTTTTCATTTTTGTTG
ATTTTTATTTCAAAGTGACGATGCAGCGCTGGCTTCTTTTTGATTTGATT
CTGATTGTAAATTGCCACTGAAAATGTTATTTGAGATCGAAAAACAAAGC
CGTGTTTTGTTCTGTTGCTATTTTCTTTCTTTCCCTAGATAAGAGAGACA
TTTGATAGATGAAATTTCAGGAATTTTTTGCTTGTCAATAAAATTATCCT
GCTTATAATTATTAAAGAGAATAAAACGAATATTTTCGTATGTGACATAA
AAGAAAGTAAAAAGAATTATAAAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039110XLOC_039110Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062440-exon-scaffold_364-1575043694:396407..396515TCONS_00062440-exon-scaffold_364-1575043694:396407..396515Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:395033..395125TCONS_00062440-exon-scaffold_364-1575043694:395033..395125Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:394860..394902TCONS_00062440-exon-scaffold_364-1575043694:394860..394902Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:393455..393590TCONS_00062440-exon-scaffold_364-1575043694:393455..393590Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:392529..392691TCONS_00062440-exon-scaffold_364-1575043694:392529..392691Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:392254..392325TCONS_00062440-exon-scaffold_364-1575043694:392254..392325Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:391825..392066TCONS_00062440-exon-scaffold_364-1575043694:391825..392066Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:391404..391437TCONS_00062440-exon-scaffold_364-1575043694:391404..391437Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:390560..391113TCONS_00062440-exon-scaffold_364-1575043694:390560..391113Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:390236..390286TCONS_00062440-exon-scaffold_364-1575043694:390236..390286Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:389812..389902TCONS_00062440-exon-scaffold_364-1575043694:389812..389902Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:389307..389502TCONS_00062440-exon-scaffold_364-1575043694:389307..389502Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:388654..388771TCONS_00062440-exon-scaffold_364-1575043694:388654..388771Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:388241..388436TCONS_00062440-exon-scaffold_364-1575043694:388241..388436Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:387706..387836TCONS_00062440-exon-scaffold_364-1575043694:387706..387836Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1575043694:386589..387259TCONS_00062440-exon-scaffold_364-1575043694:386589..387259Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:396407..396515TCONS_00062440-exon-scaffold_364-1510915933:396407..396515Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:395033..395125TCONS_00062440-exon-scaffold_364-1510915933:395033..395125Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:394860..394902TCONS_00062440-exon-scaffold_364-1510915933:394860..394902Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:393455..393590TCONS_00062440-exon-scaffold_364-1510915933:393455..393590Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:392529..392691TCONS_00062440-exon-scaffold_364-1510915933:392529..392691Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:392254..392325TCONS_00062440-exon-scaffold_364-1510915933:392254..392325Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:391825..392066TCONS_00062440-exon-scaffold_364-1510915933:391825..392066Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:391404..391437TCONS_00062440-exon-scaffold_364-1510915933:391404..391437Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:390560..391113TCONS_00062440-exon-scaffold_364-1510915933:390560..391113Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:390236..390286TCONS_00062440-exon-scaffold_364-1510915933:390236..390286Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:389812..389902TCONS_00062440-exon-scaffold_364-1510915933:389812..389902Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:389307..389502TCONS_00062440-exon-scaffold_364-1510915933:389307..389502Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:388654..388771TCONS_00062440-exon-scaffold_364-1510915933:388654..388771Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:388241..388436TCONS_00062440-exon-scaffold_364-1510915933:388241..388436Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:387706..387836TCONS_00062440-exon-scaffold_364-1510915933:387706..387836Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1510915933:386589..387259TCONS_00062440-exon-scaffold_364-1510915933:386589..387259Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:396407..396515TCONS_00062440-exon-scaffold_364-1491911889:396407..396515Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:395033..395125TCONS_00062440-exon-scaffold_364-1491911889:395033..395125Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:394860..394902TCONS_00062440-exon-scaffold_364-1491911889:394860..394902Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:393455..393590TCONS_00062440-exon-scaffold_364-1491911889:393455..393590Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:392529..392691TCONS_00062440-exon-scaffold_364-1491911889:392529..392691Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:392254..392325TCONS_00062440-exon-scaffold_364-1491911889:392254..392325Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:391825..392066TCONS_00062440-exon-scaffold_364-1491911889:391825..392066Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:391404..391437TCONS_00062440-exon-scaffold_364-1491911889:391404..391437Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:390560..391113TCONS_00062440-exon-scaffold_364-1491911889:390560..391113Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:390236..390286TCONS_00062440-exon-scaffold_364-1491911889:390236..390286Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:389812..389902TCONS_00062440-exon-scaffold_364-1491911889:389812..389902Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:389307..389502TCONS_00062440-exon-scaffold_364-1491911889:389307..389502Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:388654..388771TCONS_00062440-exon-scaffold_364-1491911889:388654..388771Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:388241..388436TCONS_00062440-exon-scaffold_364-1491911889:388241..388436Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:387706..387836TCONS_00062440-exon-scaffold_364-1491911889:387706..387836Clytia hemisphaericaexon
TCONS_00062440-exon-scaffold_364-1491911889:386589..387259TCONS_00062440-exon-scaffold_364-1491911889:386589..387259Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:386589..396515 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.46783	4.38284	0.0622456	0.0555248	16.4794	16.9932	2.30763	14.0162	0.000222158	0.00284787	0.0347838	0.00448491	0.00522529	0.00575357	0.000181191	0.00799488	0.000216319	1.1079	0.011752	0.145992	7.39641	1.56927	3.70937	5.16595	29.0802	32.0954	3.17698	0.0148138	1.36184	0.102009
Blast
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BLAST of TCONS_00062440 vs. Swiss-Prot (Human)
Match: TTC31 (Tetratricopeptide repeat protein 31 OS=Homo sapiens GN=TTC31 PE=1 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 1.751e-23
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 2 
Query: 1337 QSRQVAVQGNQLAQQNDYTGAVEMFTKAISLDPTDFRFFGNRSYCFDRLENYTKALVDSDAAIKLAPEWPKGFFRKGRALTGLNRFQEAEQVFQQVLK 1630
            QS+++A  G   AQ   Y  AV +FT+A+ L+P D R FGNRS+C +RL     AL D+  A+ L P WP+G FR G+AL GL RF+EA  VFQ+ L+
Sbjct:  304 QSQELAKLGTSFAQNGFYHEAVVLFTQALKLNPQDHRLFGNRSFCHERLGQPAWALADAQVALTLRPGWPRGLFRLGKALMGLQRFREAAAVFQETLR 401
The following BLAST results are available for this feature:
BLAST of TCONS_00062440 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC311.751e-2348.98Tetratricopeptide repeat protein 31 OS=Homo sapien... [more]
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